RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GP1BA (Homo sapiens)

Ensembl gene IDs: ENSG00000185245

Ensembl transcript IDs: ENST00000329125.6, ENST00000611961.1

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATaGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGC +
Preference number: 1 (lower is better)
Translates to: SVHRCMWEPCCILPK*FTVRSGSAPCSIGS
Trigger: GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR TCA 90 bp GATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTaGGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGT +
Preference number: 1 (lower is better)
Translates to: DACGNHAVFCQNGSP*DLAAPHAASGALSC
Trigger: ACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR GCA 90 bp GTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGTaGCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACT +
Preference number: 1 (lower is better)
Translates to: VHVITPSALAGTEIV*LCCEDRASDTEKGT
Trigger: AGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR-3UTR TCA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCTGCTTTGGCTGGGACTaGAATTGTGTGCCTGTGTTG +
Preference number: 2 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSCFGWD*NCVPVL
Trigger: CAACACAGGCACACAATTTCAGTCCCAGCCAAAGCA...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR-3UTR CCA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTACCCCTTCTGCTTTaGCTGGGACTGAAATTGTGT +
Preference number: 2 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSLPLLL*LGLKLC
Trigger: ACACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAA...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR CAA 90 bp GCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATaGTGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAG +
Preference number: 2 (lower is better)
Translates to: AKSMSLPLLLWLGLK*CACVVKTGLLIQKK
Trigger: CTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR-3UTR GCA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGGGGACTGAAATTGTGTaGCTGTGTTGTGAAGACAGG +
Preference number: 2 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPGTEIV*LCCEDR
Trigger: CCTGTCTTCACAACACAGGCACACAATTTCAGTCCC...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR-3UTR CAA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTGGCTGGGACTGAAATaGTGTGCCTGTGTTGTGAAG +
Preference number: 3 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSWLGLK*CACVVK
Trigger: CTTCACAACACAGGCACACAATTTCAGTCCCAGCCA...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR CCA 72 bp AGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATaGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGC +
Preference number: 3 (lower is better)
Translates to: RCMWEPCCILPK*FTVRSGSAPCS
Trigger: GCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR CCA 72 bp ATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTaGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTT +
Preference number: 3 (lower is better)
Translates to: MLYSAKMVHREI*QRPMQHRELCL
Trigger: AAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR-3UTR CAA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCTGGCTGGGACTGAAATaGTGTGCCTGTGTTGTGAAG +
Preference number: 3 (lower is better)
Translates to: WEPCCILPKWFTVRSGSAWLGLK*CACVVK
Trigger: CTTCACAACACAGGCACACAATTTCAGTCCCAGCCA...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR-3UTR CAA 90 bp AAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTATTACCCCTTCTGCTTaGGCTGGGACTGAAATTGTG +
Preference number: 3 (lower is better)
Translates to: KMVHREIWQRPMQHRELCITPSA*AGTEIV
Trigger: CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAAT...ACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR-3UTR CAA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGATTACCCCTTCTGCTTaGGCTGGGACTGAAATTGTG +
Preference number: 3 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPITPSA*AGTEIV
Trigger: CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAAT...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
3UTR GCA 72 bp CACATCCTGATAAATCACTTTCCAGATTTTCTTCTGTaGATAGATGCATGTGGGAACCATGCTGTATTCTGC +
Preference number: 3 (lower is better)
Translates to: HILINHFPDFLL*IDACGNHAVFC
Trigger: GCAGAATACAGCATGGTTCCCACATGCATCTATGCACAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCCAGGGTCCCCAGCACTaGCAGCGTCCCATCGACCTG +
Preference number: 4 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSQGPQH*QRPIDL
Trigger: CAGGTCGATGGGACGCTGCCAGTGCTGGGGACCCTG...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCGCGAGGTCAGCCGGTTaGAGGAGACGTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSARSAG*RRRPGR
Trigger: CCGTCCTGGACGTCTCCTTCAACCGGCTGACCTCGC...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp ATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGGTCCCCAAACCTCCCACCCTCCGGGACGGGCTCTaGGGTGGTCGGGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: IPIGEPTGSSLKVPKPPTLRDGL*GGRAWG
Trigger: ACCCCAAGCCCGACCACCTCAGAGCCCGTCCCGGAG...GGTGGGAGGTTTGGGGACCTTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTCAGGGTGGTCATGTTTaGGGCGGGCTCCGGGACGGG +
Preference number: 4 (lower is better)
Translates to: PKWFTVRSGSAPCSIGSFQGGHV*GGLRDG
Trigger: CCCGTCCCGGAGCCCGCCCCAAACATGACCACCCTG...AAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCGAGTGGGCTCCAGGGTaGTCATGTTTGGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSEWAPG*SCLGRA
Trigger: AGCCCGCCCCAAACATGACCACCCTGGAGCCCACTC...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCAGGTGGGCTCTGGGGTaGTCGGGCTGGGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRRWALG*SGWGRA
Trigger: AGCCCGCCCCCAGCCCGACCACCCCAGAGCCCACCT...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329125.6
CDS-3UTR TCA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGGCTGGGGGCGGGCTCTaGGGTGGGCTCCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPAGGGL*GGLRGG
Trigger: ACCACCCCGGAGCCCACCTCAGAGCCCGCCCCCAGC...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329125.6
CDS-3UTR CCA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCGGTGGCTGGCCACTTTaGAGACCTCACAGATGGGGT +
Preference number: 4 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSGGWPL*RPHRWG
Trigger: ACCCCATCTGTGAGGTCTCCAAAGTGGCCAGCCACC...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCAGCGTCCCATCGACCTaGAGCTTGGTGAGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSSVPST*SLVSSH
Trigger: GTGCGAGCTCACCAAGCTCCAGGTCGATGGGACGCT...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGGGCGTCAGGAGCCCTaGGGGCAGGGTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQGRQEP*GQGLQL
Trigger: GAGCTGAAGACCCTGCCCCCAGGGCTCCTGACGCCC...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCAGGGTGGTCATGTTTaGGGCGGGCTCCGGGACGGG +
Preference number: 4 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRQGGHV*GGLRDG
Trigger: CCCGTCCCGGAGCCCGCCCCAAACATGACCACCCTG...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCGAGCGTCTTCTAGGGTaGCACTCGACTCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSERLLG*HSTPSF
Trigger: GAAGGACGGAGTCGAGTGGCACCCTAGAAGACGCTC...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329125.6
CDS-3UTR CCA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCGGTGGCTGGCCACTTTaGAGACCTCACAGATGGGGT +
Preference number: 4 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSGGWPL*RPHRWG
Trigger: ACCCCATCTGTGAGGTCTCCAAAGTGGCCAGCCACC...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCAGGGTCCCCAGCACTaGCAGCGTCCCATCGACCTG +
Preference number: 4 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRQGPQH*QRPIDL
Trigger: CAGGTCGATGGGACGCTGCCAGTGCTGGGGACCCTG...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGTCTCCAGCTTGGGTGTaGGCGTCAGGAGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVSPAWV*ASGALG
Trigger: CCCCAGGGCTCCTGACGCCCACACCCAAGCTGGAGA...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTCGACCTGGAGCTTGGTaGGCTCGCACCTATCTAGGT +
Preference number: 4 (lower is better)
Translates to: PKWFTVRSGSAPCSIGSFRPGAW*ARTYLG
Trigger: ACCTAGATAGGTGCGAGCTCACCAAGCTCCAGGTCG...AAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGAGACGTCCAGGACGGTaGGAGCAGGCAGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVRRPGR*EQAVSA
Trigger: GGCAGACACTGCCTGCTCTCACCGTCCTGGACGTCT...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp CCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTACTTGCCGTCCCCTCTaGAGCTCCAGGTGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: PKWFTVRSGSAPCSIGSFTCRPL*SSRCVV
Trigger: AACCACACACCTGGAGCTGCAGAGGGGACGGCAAGT...AAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGGACGGGCTCTGAGGTaGTCGGGCTTGGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQGRALR*SGLGLV
Trigger: AACCAACCCCAAGCCCGACCACCTCAGAGCCCGTCC...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGGGACGGGCTCTGAGGTaGTCGGGCTTGGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVGRALR*SGLGLV
Trigger: AACCAACCCCAAGCCCGACCACCTCAGAGCCCGTCC...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGGCTGGAGCGGAAAGTaGGAAGCGAACCTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: PKWFTVRSGSAPCSIGSFGWSGK*EANLEG
Trigger: TCCTTCGAGGTTCGCTTCCCACTTTCCGCTCCAGCC...AAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTGCTTTGGCTGGGACTaGAATTGTGTGCCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSCFGWD*NCVPVL
Trigger: CAACACAGGCACACAATTTCAGTCCCAGCCAAAGCA...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCTGGAGCTCTCCAAATaGCCTTGGAGCACCCCACGG +
Preference number: 4 (lower is better)
Translates to: WEPCCILPKWFTVRSGSALELSK*PWSTPR
Trigger: CCGTGGGGTGCTCCAAGGGCATTTGGAGAGCTCCAG...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCCACTCAGGTGGAGGATaGTTGTGTCTTTCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSHSGGG*LCLSAG
Trigger: ACCTGCCGAAAGACACAACCATCCTCCACCTGAGTG...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGGGGCGTCAGGAGCCCTaGGGGCAGGGTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPGRQEP*GQGLQL
Trigger: GAGCTGAAGACCCTGCCCCCAGGGCTCCTGACGCCC...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCAAGGAGGAGGGCATTTaGCTGTCTAGAGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSKEEGI*LSREAV
Trigger: CACTGCTTCTCTAGACAGCCAAATGCCCTCCTCCTT...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCGGTCGGGCTTGGGGTTaGTTCAGTAGTGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSGRAWG*FSSGFW
Trigger: CCAAAATCCACTACTGAACCAACCCCAAGCCCGACC...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTCTCTCCAAATGCCCTTaGAGCACCCCACGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PKWFTVRSGSAPCSIGSFLSKCP*STPRSF
Trigger: AAAGCTCCGTGGGGTGCTCCAAGGGCATTTGGAGAG...AAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGTCAGAGCAGCACCTTaGCCAGAGTCCAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQVRAAP*PESRAC
Trigger: ACAGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGAC...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGGTGTGTGGTTTGTGTaGCTGTGGTCAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PKWFTVRSGSAPCSIGSFGVWFV*LWSEQH
Trigger: GTGCTGCTCTGACCACAGCCACACAAACCACACACC...AAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGGCGAGGTCAGCCGGTTaGAGGAGACGTCCAGGACGG +
Preference number: 4 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPARSAG*RRRPGR
Trigger: CCGTCCTGGACGTCTCCTTCAACCGGCTGACCTCGC...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGAGAGCAGGCAGTGTCTaGCCTAGCAAGGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVRAGSV*PSKGRL
Trigger: AAGCCTGCCCTTGCTAGGGCAGACACTGCCTGCTCT...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAAGAGCAGGCAGTGTCTaGCCTAGCAAGGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQRAGSV*PSKGRL
Trigger: AAGCCTGCCCTTGCTAGGGCAGACACTGCCTGCTCT...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCACTTGCCGTCCCCTCTaGAGCTCCAGGTGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: WEPCCILPKWFTVRSGSATCRPL*SSRCVV
Trigger: AACCACACACCTGGAGCTGCAGAGGGGACGGCAAGT...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCTGGGGTGGTCGGGCTTaGAGTGGGCTCCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VKTGLLIQKKELRPLPITWGGRA*SGLQGG
Trigger: ACCACCCTGGAGCCCACTCCAAGCCCGACCACCCCA...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCTCGGGCTTGTGGCGATaGTCGGGATTGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGSGLWR*SGLGWA
Trigger: AGCCCACCCCAATCCCGACCATCGCCACAAGCCCGA...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp ATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGGTCCCCAAACCTCCCACCCTCTCCAAATGCCCTTaGAGCACCCCACGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: IPIGEPTGSSLKVPKPPTLSKCP*STPRSF
Trigger: AAAGCTCCGTGGGGTGCTCCAAGGGCATTTGGAGAG...GGTGGGAGGTTTGGGGACCTTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp ATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGGTCCCCAAACCTCCCACCTGGTTTGTGTGGCTGTaGTCAGAGCAGCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: IPIGEPTGSSLKVPKPPTWFVWL*SEQHLG
Trigger: GCCAAGGTGCTGCTCTGACCACAGCCACACAAACCA...GGTGGGAGGTTTGGGGACCTTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGAGACGTCCAGGACGGTaGGAGCAGGCAGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPRRPGR*EQAVSA
Trigger: GGCAGACACTGCCTGCTCTCACCGTCCTGGACGTCT...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCTTTGGTGGGGAACTTaGCCACAGTCCTTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRLWWGT*PQSLWH
Trigger: GTGCCACAAGGACTGTGGTCAAGTTCCCCACCAAAG...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGCTCCGGGACGGGCTCTaGGGTGGTCGGGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PDTTSAHILINHFPDFLLLRDGL*GGRAWG
Trigger: ACCCCAAGCCCGACCACCTCAGAGCCCGTCCCGGAG...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGCAAAATGGTTCACCGTaGGATCTGGCAGCGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVQNGSP*DLAAPH
Trigger: ATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTG...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCTCTGGCAGCGCCCCATaGAGCATCGGGAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGSGSAP*SIGSFV
Trigger: GACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGA...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp ATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGGTCCCCAAACCTCCCACCCACTCAGGTGGAGGATaGTTGTGTCTTTCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: IPIGEPTGSSLKVPKPPTHSGGG*LCLSAG
Trigger: ACCTGCCGAAAGACACAACCATCCTCCACCTGAGTG...GGTGGGAGGTTTGGGGACCTTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp AAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTGGGGCACCCCTTTCCTaGGTATTTGTAGACGGGAAA +
Preference number: 4 (lower is better)
Translates to: KMVHREIWQRPMQHRELCGAPLS*VFVDGK
Trigger: TTTCCCGTCTACAAATACCCAGGAAAGGGGTGCCCC...ACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCTGGGGTGGTCGGGCTTaGAGTGGGCTCCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: CACVVKTGLLIQKKELRPWGGRA*SGLQGG
Trigger: ACCACCCTGGAGCCCACTCCAAGCCCGACCACCCCA...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGGGATGGTCGGGCTTGTaGCGATGGTCGGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPGWSGL*RWSGLG
Trigger: CCCCAATCCCGACCATCGCCACAAGCCCGACCATCC...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp ATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGGTCCCCAAACCTCCCACCCCCACGGAGCTTTGGTaGCTGATCAAGTTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: IPIGEPTGSSLKVPKPPTPTELW*LIKFRD
Trigger: ATCCCTGAACTTGATCAGCCACCAAAGCTCCGTGGG...GGTGGGAGGTTTGGGGACCTTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCTGGTTTGTGTGGCTGTaGTCAGAGCAGCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: WEPCCILPKWFTVRSGSAWFVWL*SEQHLG
Trigger: GCCAAGGTGCTGCTCTGACCACAGCCACACAAACCA...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCTAGGTTCAGCTGAGTaGGGCGAGTGTAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: WEPCCILPKWFTVRSGSALGSAE*GECKAS
Trigger: TGATGCCTTACACTCGCCTCACTCAGCTGAACCTAG...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCTAGGTTCAGCTGAGTaGGGCGAGTGTAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRLGSAE*GECKAS
Trigger: TGATGCCTTACACTCGCCTCACTCAGCTGAACCTAG...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCGAGTTTTGGAGAATGTaGTGGATTCCATGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSEFWRM*WIPCEV
Trigger: CACTTCACATGGAATCCATCACATTCTCCAAAACTC...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGGGGCACCCCTTTCCTaGGTATTTGTAGACGGGAAA +
Preference number: 4 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQGAPLS*VFVDGK
Trigger: TTTCCCGTCTACAAATACCCAGGAAAGGGGTGCCCC...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGGGTCGGGCTTGGGGTTaGTTCAGTAGTGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVGRAWG*FSSGFW
Trigger: CCAAAATCCACTACTGAACCAACCCCAAGCCCGACC...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACGAGTGGGCTCCAGGGTaGTCATGTTTGGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHEWAPG*SCLGRA
Trigger: AGCCCGCCCCAAACATGACCACCCTGGAGCCCACTC...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp AAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTGACGGGAAACTTGTCTaGATTGTCACACTGCACACT +
Preference number: 4 (lower is better)
Translates to: KMVHREIWQRPMQHRELCDGKLV*IVTLHT
Trigger: AGTGTGCAGTGTGACAATTCAGACAAGTTTCCCGTC...ACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACTCTGGCAGCGCCCCATaGAGCATCGGGAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHSGSAP*SIGSFV
Trigger: GACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGA...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCCCAGATTTTCTTCTGTaGATAGATGCATGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSPDFLL*IDACGN
Trigger: GTTCCCACATGCATCTATGCACAGAAGAAAATCTGG...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACTGGAGACCTCACAGATaGGGTGGGGGTGTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHWRPHR*GGGVRG
Trigger: GCCCCTTACACCCCCACCCCATCTGTGAGGTCTCCA...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCAGCGTCCCATCGACCTaGAGCTTGGTGAGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: CACVVKTGLLIQKKELRPSVPST*SLVSSH
Trigger: GTGCGAGCTCACCAAGCTCCAGGTCGATGGGACGCT...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGTCTCCAGCTTGGGTGTaGGCGTCAGGAGCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PDTTSAHILINHFPDFLLSPAWV*ASGALG
Trigger: CCCCAGGGCTCCTGACGCCCACACCCAAGCTGGAGA...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCTACAGCGAGTTCTCTTaGAGGAGAAGGGTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRYSEFS*RRRVSR
Trigger: TCTCGACACCCTTCTCCTCCAAGAGAACTCGCTGTA...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACTGGTCGGGCTTGGAGTaGGCTCCAGGGTGGTCATGT +
Preference number: 4 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHWSGLE*APGWSC
Trigger: ACATGACCACCCTGGAGCCCACTCCAAGCCCGACCA...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATGGATGGTCGGGCTTGTaGCGATGGTCGGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: CCEDRASDTEKGTKTPPYGWSGL*RWSGLG
Trigger: CCCCAATCCCGACCATCGCCACAAGCCCGACCATCC...ATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGAGTCCAGGGCCTGTaGTTTCACATGCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGRVQGL*FHMPNP
Trigger: TGGGTTGGGCATGTGAAACCACAGGCCCTGGACTCT...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCGTCAGAGCAGCACCTTaGCCAGAGTCCAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CACVVKTGLLIQKKELRPVRAAP*PESRAC
Trigger: ACAGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGAC...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCGGTGTGTGGTTTGTGTaGCTGTGGTCAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGGVWFV*LWSEQH
Trigger: GTGCTGCTCTGACCACAGCCACACAAACCACACACC...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGACGGGAAACTTGTCTaGATTGTCACACTGCACACT +
Preference number: 4 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQDGKLV*IVTLHT
Trigger: AGTGTGCAGTGTGACAATTCAGACAAGTTTCCCGTC...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCCTTTGGTGGGGAACTTaGCCACAGTCCTTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: VKTGLLIQKKELRPLPITLWWGT*PQSLWH
Trigger: GTGCCACAAGGACTGTGGTCAAGTTCCCCACCAAAG...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAATCTGAATTGTCACACTaGACACTGGCCACGTTAGAG +
Preference number: 4 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQSELSH*TLATLE
Trigger: CTCTAACGTGGCCAGTGTGCAGTGTGACAATTCAGA...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGGGTGGGAATGTGGTCTaGTCCTTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVGGNVV*SLVDSC
Trigger: ACAAGAATCCACTAAGGAGCAGACCACATTCCCACC...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCGGTGGGAATGTGGTCTaGTCCTTAGTGGATTCTTGT +
Preference number: 4 (lower is better)
Translates to: WEPCCILPKWFTVRSGSAGGNVV*SLVDSC
Trigger: ACAAGAATCCACTAAGGAGCAGACCACATTCCCACC...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGGGGACTGAAATTGTGTaGCTGTGTTGTGAAGACAGG +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVGTEIV*LCCEDR
Trigger: CCTGTCTTCACAACACAGGCACACAATTTCAGTCCC...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCGTCTTTCGGCAGGTCTaGAGGCAGCGCTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: VKTGLLIQKKELRPLPITVFRQV*RQRCQI
Trigger: AATCTGACAGCGCTGCCTCCAGACCTGCCGAAAGAC...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTTCATCACCAAGGGTaGGGCACCCCTTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CACVVKTGLLIQKKELRPLHHQG*GTPFLG
Trigger: ACCCAGGAAAGGGGTGCCCCACCCTTGGTGATGAAG...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCAGTGGATTCTTGTGTTaGATGCAAGGAGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRSGFLC*MQGGGH
Trigger: ATGCCCTCCTCCTTGCATCCAACACAAGAATCCACT...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGTCGGGCTTGTGGCGATaGTCGGGATTGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PDTTSAHILINHFPDFLLSGLWR*SGLGWA
Trigger: AGCCCACCCCAATCCCGACCATCGCCACAAGCCCGA...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCCCCACGGAGCTTTGGTaGCTGATCAAGTTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGPTELW*LIKFRD
Trigger: ATCCCTGAACTTGATCAGCCACCAAAGCTCCGTGGG...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCAGAGTCCAGGGCCTGTaGTTTCACATGCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: VKTGLLIQKKELRPLPITRVQGL*FHMPNP
Trigger: TGGGTTGGGCATGTGAAACCACAGGCCCTGGACTCT...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACGGCTGGAGCGGAAAGTaGGAAGCGAACCTCGAAGGA +
Preference number: 4 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHGWSGK*EANLEG
Trigger: TCCTTCGAGGTTCGCTTCCCACTTTCCGCTCCAGCC...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCCACCCTCAGAGGCTGTaGCCAGAGTACCTAATGCTC +
Preference number: 4 (lower is better)
Translates to: VKTGLLIQKKELRPLPITHPQRL*PEYLML
Trigger: GAGCATTAGGTACTCTGGCCACAGCCTCTGAGGGTG...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp AAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTTGTATTCTGCCAAAATaGTTCACCGTGAGATCTGGC +
Preference number: 4 (lower is better)
Translates to: KMVHREIWQRPMQHRELCCILPK*FTVRSG
Trigger: GCCAGATCTCACGGTGAACCATTTTGGCAGAATACA...ACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGCTGGAGCTCTCCAAATaGCCTTGGAGCACCCCACGG +
Preference number: 4 (lower is better)
Translates to: PDTTSAHILINHFPDFLLLELSK*PWSTPR
Trigger: CCGTGGGGTGCTCCAAGGGCATTTGGAGAGCTCCAG...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGTGGAGACCTCACAGATaGGGTGGGGGTGTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PDTTSAHILINHFPDFLLWRPHR*GGGVRG
Trigger: GCCCCTTACACCCCCACCCCATCTGTGAGGTCTCCA...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCTTCATCACCAAGGGTaGGGCACCCCTTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CCEDRASDTEKGTKTPPYLHHQG*GTPFLG
Trigger: ACCCAGGAAAGGGGTGCCCCACCCTTGGTGATGAAG...ATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCTGGGGTCCATCTAGGTaGGAATGTGGTCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VKTGLLIQKKELRPLPITWGPSR*ECGLLL
Trigger: AAGGAGCAGACCACATTCCCACCTAGATGGACCCCA...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGGGGTCCATCTAGGTaGGAATGTGGTCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPWGPSR*ECGLLL
Trigger: AAGGAGCAGACCACATTCCCACCTAGATGGACCCCA...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGGTGAAGTGTGAAATTTaGGGTCCATCTAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVVKCEI*GPSRWE
Trigger: TTCCCACCTAGATGGACCCCAAATTTCACACTTCAC...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCACCCCACGGAGCTTTaGTGGCTGATCAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CACVVKTGLLIQKKELRPHPTEL*WLIKFR
Trigger: CCTGAACTTGATCAGCCACCAAAGCTCCGTGGGGTG...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCTGTATTCTGCCAAAATaGTTCACCGTGAGATCTGGC +
Preference number: 4 (lower is better)
Translates to: WEPCCILPKWFTVRSGSACILPK*FTVRSG
Trigger: GCCAGATCTCACGGTGAACCATTTTGGCAGAATACA...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGGTGCATAGATGCATGTaGGAACCATGCTGTATTCTG +
Preference number: 4 (lower is better)
Translates to: PRQVHVITPSALAGTEIVVHRCM*EPCCIL
Trigger: CAGAATACAGCATGGTTCCCACATGCATCTATGCAC...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp TTGTGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACGACCTGGAGCTTGGTaGGCTCGCACCTATCTAGGT +
Preference number: 4 (lower is better)
Translates to: LCACVVKTGLLIQKKELRRPGAW*ARTYLG
Trigger: ACCTAGATAGGTGCGAGCTCACCAAGCTCCAGGTCG...TCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCTCTGAATTGTCACACTaGACACTGGCCACGTTAGAG +
Preference number: 4 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGSELSH*TLATLE
Trigger: CTCTAACGTGGCCAGTGTGCAGTGTGACAATTCAGA...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCGGGACTGAAATTGTGTaGCTGTGTTGTGAAGACAGG +
Preference number: 4 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGGTEIV*LCCEDR
Trigger: CCTGTCTTCACAACACAGGCACACAATTTCAGTCCC...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR GCA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCAGATTTTCTTCTGTaGATAGATGCATGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: WEPCCILPKWFTVRSGSAPDFLL*IDACGN
Trigger: GTTCCCACATGCATCTATGCACAGAAGAAAATCTGG...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCCTCAGAGGCTGTaGCCAGAGTACCTAATGCTC +
Preference number: 4 (lower is better)
Translates to: CCEDRASDTEKGTKTPPYHPQRL*PEYLML
Trigger: GAGCATTAGGTACTCTGGCCACAGCCTCTGAGGGTG...ATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TTGTGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGAGTTCACCGTGAGATCTaGCAGCGCCCCATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LCACVVKTGLLIQKKELRVHREI*QRPMQH
Trigger: ATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAAC...TCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGGGCAGGCTTTGCAGCTaGTTGTGGGATAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: PDTTSAHILINHFPDFLLGRLCS*LWDRSR
Trigger: CCTGGATCTATCCCACAATCAGCTGCAAAGCCTGCC...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGCAAAATGGTTCACCGTaGGATCTGGCAGCGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PDTTSAHILINHFPDFLLQNGSP*DLAAPH
Trigger: ATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTG...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TTGTGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGAGTCTTTCGGCAGGTCTaGAGGCAGCGCTGTCAGATT +
Preference number: 4 (lower is better)
Translates to: LCACVVKTGLLIQKKELRVFRQV*RQRCQI
Trigger: AATCTGACAGCGCTGCCTCCAGACCTGCCGAAAGAC...TCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCTACAGCGAGTTCTCTTaGAGGAGAAGGGTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: CACVVKTGLLIQKKELRPYSEFS*RRRVSR
Trigger: TCTCGACACCCTTCTCCTCCAAGAGAACTCGCTGTA...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACAAGGAGGAGGGCATTTaGCTGTCTAGAGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHKEEGI*LSREAV
Trigger: CACTGCTTCTCTAGACAGCCAAATGCCCTCCTCCTT...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGCACCCCACGGAGCTTTaGTGGCTGATCAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PDTTSAHILINHFPDFLLHPTEL*WLIKFR
Trigger: CCTGAACTTGATCAGCCACCAAAGCTCCGTGGGGTG...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCTTACCCCTTCTGCTTTaGCTGGGACTGAAATTGTGT +
Preference number: 4 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGLPLLL*LGLKLC
Trigger: ACACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAA...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TTGTGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACAGTTCACTTCTAGGTaGCTGGCCACTTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: LCACVVKTGLLIQKKELRQFTSR*LATLET
Trigger: GGTCTCCAAAGTGGCCAGCCACCTAGAAGTGAACTG...TCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCAGTGGATTCTTGTGTTaGATGCAAGGAGGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: CACVVKTGLLIQKKELRPSGFLC*MQGGGH
Trigger: ATGCCCTCCTCCTTGCATCCAACACAAGAATCCACT...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCGTGAAGTGTGAAATTTaGGGTCCATCTAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VKTGLLIQKKELRPLPITVKCEI*GPSRWE
Trigger: TTCCCACCTAGATGGACCCCAAATTTCACACTTCAC...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGGAGTTTTGGAGAATGTaGTGGATTCCATGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPEFWRM*WIPCEV
Trigger: CACTTCACATGGAATCCATCACATTCTCCAAAACTC...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR TCA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGTGCTTTGGCTGGGACTaGAATTGTGTGCCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: PDTTSAHILINHFPDFLLCFGWD*NCVPVL
Trigger: CAACACAGGCACACAATTTCAGTCCCAGCCAAAGCA...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATTTACCCCTTCTGCTTTaGCTGGGACTGAAATTGTGT +
Preference number: 4 (lower is better)
Translates to: CCEDRASDTEKGTKTPPYLPLLL*LGLKLC
Trigger: ACACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAA...ATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CCA 90 bp TTGTGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGAGTGCATAGATGCATGTaGGAACCATGCTGTATTCTG +
Preference number: 4 (lower is better)
Translates to: LCACVVKTGLLIQKKELRVHRCM*EPCCIL
Trigger: CAGAATACAGCATGGTTCCCACATGCATCTATGCAC...TCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCCCAGGGTGGTCATGTTaGGGGCGGGCTCCGGGACGG +
Preference number: 5 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSPGWSC*GRAPGR
Trigger: CCGTCCCGGAGCCCGCCCCAAACATGACCACCCTGG...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS GCA 90 bp AGGAAGAGCAGCCAGGCCCGGGGCACTGTCACTTGCCGTCCCCTCTaGAGCTCCAGGTGTGTGGTTTGTGTGGCTGTGGTCAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RKSSQARGTVTCRPL*SSRCVVCVAVVRAA
Trigger: TGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCTGCAGAGGGGACGGCAAGTGACAGTGCCCCGGGCCTGGCTGCTCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp CCCGGGGCACTGTCACTTGCCGTCCCCTCTGCAGCTCCAGGTGTGTaGTTTGTGTGGCTGTGGTCAGAGCAGCACCTTGGCCAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: PGALSLAVPSAAPGV*FVWLWSEQHLGQSP
Trigger: TGGACTCTGGCCAAGGTGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCTGCAGAGGGGACGGCAAGTGACAGTGCCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCCCGGGGCACTGTCACTaGCCGTCCCCTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSPGHCH*PSPLQL
Trigger: GAGCTGCAGAGGGGACGGCAAGTGACAGTGCCCCGG...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS GCA 90 bp TGGGTGTGGGCGTCAGGAGCCCTGGGGGCAGGGTCTTCAGCTCATTaGCTTTCAGGTAGAGCTCTTGGAGTTCGCCAAGACCACGCAGGG +
Preference number: 5 (lower is better)
Translates to: WVWASGALGAGSSAH*LSGRALGVRQDHAG
Trigger: CCCTGCGTGGTCTTGGCGAACTCCAAGAGCTCTACCTGAAAGGCAATGAGCTGAAGACCCTGCCCCCAGGGCTCCTGACGCCCACACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp CTGTCACTTGCCGTCCCCTCTGCAGCTCCAGGTGTGTGGTTTGTGTaGCTGTGGTCAGAGCAGCACCTTGGCCAGAGTCCAGGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LSLAVPSAAPGVWFV*LWSEQHLGQSPGPV
Trigger: CACAGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCTGCAGAGGGGACGGCAAGTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS TCA 90 bp GTGAGAGCAGGCAGTGTCTGCCCTAGCAAGGGCAGGCTTTGCAGCTaGTTGTGGGATAGATCCAGGGTCCCCAGCACTGGCAGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: VRAGSVCPSKGRLCS*LWDRSRVPSTGSVP
Trigger: TGGGACGCTGCCAGTGCTGGGGACCCTGGATCTATCCCACAATCAGCTGCAAAGCCTGCCCTTGCTAGGGCAGACACTGCCTGCTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp TGTGGCTGTGGTCAGAGCAGCACCTTGGCCAGAGTCCAGGGCCTGTaGTTTCACATGCCCAACCCAGCTCAGCAGCAGGATGAGGACCAC +
Preference number: 5 (lower is better)
Translates to: CGCGQSSTLARVQGL*FHMPNPAQQQDEDH
Trigger: GTGGTCCTCATCCTGCTGCTGAGCTGGGTTGGGCATGTGAAACCACAGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGACCACAGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp CTTGCCGTCCCCTCTGCAGCTCCAGGTGTGTGGTTTGTGTGGCTGTaGTCAGAGCAGCACCTTGGCCAGAGTCCAGGGCCTGTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: LAVPSAAPGVWFVWL*SEQHLGQSPGPVVS
Trigger: TGAAACCACAGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCTGCAGAGGGGACGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCAGGGTGGTCATGTTaGGGGCGGGCTCCGGGACGG +
Preference number: 5 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRPGWSC*GRAPGR
Trigger: CCGTCCCGGAGCCCGCCCCAAACATGACCACCCTGG...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp AGCCAGACTGAGCTTCTCCAGCTTGGGTGTGGGCGTCAGGAGCCCTaGGGGCAGGGTCTTCAGCTCATTGCCTTTCAGGTAGAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: SQTELLQLGCGRQEP*GQGLQLIAFQVELL
Trigger: CAAGAGCTCTACCTGAAAGGCAATGAGCTGAAGACCCTGCCCCCAGGGCTCCTGACGCCCACACCCAAGCTGGAGAAGCTCAGTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp AGCTCCAGGTGTGTGGTTTGTGTGGCTGTGGTCAGAGCAGCACCTTaGCCAGAGTCCAGGGCCTGTGGTTTCACATGCCCAACCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SSRCVVCVAVVRAAP*PESRACGFTCPTQL
Trigger: GAGCTGGGTTGGGCATGTGAAACCACAGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGGGGGTGTAAGGGGCTaGGCAGCAGGAGCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: PKWFTVRSGSAPCSIGSFGGVRG*AAGAAR
Trigger: TCTTGCTGCTCCTGCTGCCAAGCCCCTTACACCCCC...AAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp ATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAGGTCCCCAAACCTCCCACCGGTCAGAGCAGCACCTaGGCCAGAGTCCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: IPIGEPTGSSLKVPKPPTGQSST*ARVQGL
Trigger: CAGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGACC...GGTGGGAGGTTTGGGGACCTTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCGGGGCACTGTCACTaGCCGTCCCCTCTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRPGHCH*PSPLQL
Trigger: GAGCTGCAGAGGGGACGGCAAGTGACAGTGCCCCGG...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS GCA 90 bp CAGGCAGGCAGAAAGACCTCCGAAGGCACAGAGCGTCTTCTAGGGTaGCACTCGACTCCGTCCTTCTCTCTTCTAGCCCCATGGAGGACT +
Preference number: 5 (lower is better)
Translates to: QAGRKTSEGTERLLG*HSTPSFSLLAPWRT
Trigger: AGTCCTCCATGGGGCTAGAAGAGAGAAGGACGGAGTCGAGTGGCACCCTAGAAGACGCTCTGTGCCTTCGGAGGTCTTTCTGCCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329125.6
CDS CCA 90 bp CACAGTTCACTTCTAGGTGGCTGGCCACTTTGGAGACCTCACAGATaGGGTGGGGGTGTAAGGGGCTTGGCAGCAGGAGCAGCAAGAGGA +
Preference number: 5 (lower is better)
Translates to: HSSLLGGWPLWRPHR*GGGVRGLAAGAARG
Trigger: TCCTCTTGCTGCTCCTGCTGCCAAGCCCCTTACACCCCCACCCCATCTGTGAGGTCTCCAAAGTGGCCAGCCACCTAGAAGTGAACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCGCTTTGGTGGGGAACTaGACCACAGTCCTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSALVGN*TTVLVA
Trigger: TGCCACAAGGACTGTGGTCAAGTTCCCCACCAAAGC...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCAGGATGGTCGGGCTaGTGGCGATGGTCGGGATTG +
Preference number: 5 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRPGWSG*WRWSGL
Trigger: CAATCCCGACCATCGCCACAAGCCCGACCATCCTGG...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp GGAGGCAGCGCTGTCAGATTCCTCTTGTCACAGTTCACTTCTAGGTaGCTGGCCACTTTGGAGACCTCACAGATGGGGTGGGGGTGTAAG +
Preference number: 5 (lower is better)
Translates to: GGSAVRFLLSQFTSR*LATLETSQMGWGCK
Trigger: CTTACACCCCCACCCCATCTGTGAGGTCTCCAAAGTGGCCAGCCACCTAGAAGTGAACTGTGACAAGAGGAATCTGACAGCGCTGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp TTGCCAGGGAGAAGGTGTACAGGAGGTTCTCACTCAGGTGGAGGATaGTTGTGTCTTTCGGCAGGTCTGGAGGCAGCGCTGTCAGATTCC +
Preference number: 5 (lower is better)
Translates to: LPGRRCTGGSHSGGG*LCLSAGLEAALSDS
Trigger: GGAATCTGACAGCGCTGCCTCCAGACCTGCCGAAAGACACAACCATCCTCCACCTGAGTGAGAACCTCCTGTACACCTTCTCCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGAGGTGGCTGGCCACTTaGGAGACCTCACAGATGGGG +
Preference number: 5 (lower is better)
Translates to: PRQVHVITPSALAGTEIVRWLAT*ETSQMG
Trigger: CCCCATCTGTGAGGTCTCCAAAGTGGCCAGCCACCT...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCTGTAAGGCATCAGGGTaGCCAGGGAGAAGGTGTACA +
Preference number: 5 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSCKASG*PGRRCT
Trigger: TGTACACCTTCTCCCTGGCAACCCTGATGCCTTACA...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCGCTCTCCAAATGCCCTaGGAGCACCCCACGGAGCTT +
Preference number: 5 (lower is better)
Translates to: WEPCCILPKWFTVRSGSAALQMP*EHPTEL
Trigger: AAGCTCCGTGGGGTGCTCCAAGGGCATTTGGAGAGC...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCGCTCTCCAAATGCCCTaGGAGCACCCCACGGAGCTT +
Preference number: 5 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRALQMP*EHPTEL
Trigger: AAGCTCCGTGGGGTGCTCCAAGGGCATTTGGAGAGC...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCGCTGTCAGATTCCTCTaGTCACAGTTCACTTCTAGG +
Preference number: 5 (lower is better)
Translates to: LPKWFTVRSGSAPCSIGSAVRFL*SQFTSR
Trigger: CCTAGAAGTGAACTGTGACAAGAGGAATCTGACAGC...GCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAACCATCGACCTGGAGCTaGGTGAGCTCGCACCTATCT +
Preference number: 5 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQPSTWS*VSSHLS
Trigger: AGATAGGTGCGAGCTCACCAAGCTCCAGGTCGATGG...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGAGGTCAGCCGGTaGAAGGAGACGTCCAGGACG +
Preference number: 5 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGSEVSR*KETSRT
Trigger: CGTCCTGGACGTCTCCTTCAACCGGCTGACCTCGCT...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp GTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCGCACCCCACGGAGCTTaGGTGGCTGATCAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: VGTMLYSAKMVHREIWQRAPHGA*VADQVQ
Trigger: CTGAACTTGATCAGCCACCAAAGCTCCGTGGGGTGC...GCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGGGGGGTGTAAGGGGCTaGGCAGCAGGAGCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPGGVRG*AAGAAR
Trigger: TCTTGCTGCTCCTGCTGCCAAGCCCCTTACACCCCC...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGGTGGCTGGCCACTTaGGAGACCTCACAGATGGGG +
Preference number: 5 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGRWLAT*ETSQMG
Trigger: CCCCATCTGTGAGGTCTCCAAAGTGGCCAGCCACCT...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCTCAGGTGGAGGATGGTaGTGTCTTTCGGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: WEPCCILPKWFTVRSGSASGGGW*CLSAGL
Trigger: CAGACCTGCCGAAAGACACAACCATCCTCCACCTGA...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CTGTGCATAGATGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGCTGAGCTTCTCCAGCTaGGGTGTGGGCGTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: LCIDACGNHAVFCQNGSPLSFSS*GVGVRS
Trigger: GCTCCTGACGCCCACACCCAAGCTGGAGAAGCTCAG...CGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCATCTATGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTTGTCCCTCCTTAGTGGATTCTaGTGTTGGATGCAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: FTVRSGSAPCSIGSFVLSLLSGF*CWMQGG
Trigger: TCCTCCTTGCATCCAACACAAGAATCCACTAAGGAG...GGACAAGACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS TCA 90 bp GGTGGGGCACCCCTTTCCTGGGTATTTGTAGACGGGAAACTTGTCTaGATTGTCACACTGCACACTGGCCACGTTAGAGGTCATGGCCTT +
Preference number: 5 (lower is better)
Translates to: GGAPLSWVFVDGKLV*IVTLHTGHVRGHGL
Trigger: AAGGCCATGACCTCTAACGTGGCCAGTGTGCAGTGTGACAATTCAGACAAGTTTCCCGTCTACAAATACCCAGGAAAGGGGTGCCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCATACAGCGAGTTCTCTaGGAGGAGAAGGGTGTCGAG +
Preference number: 5 (lower is better)
Translates to: WEPCCILPKWFTVRSGSAIQRVL*EEKGVE
Trigger: CTCGACACCCTTCTCCTCCAAGAGAACTCGCTGTAT...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGTTAGAGGTCATGGCCTaGACGTCCACACCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: PRQVHVITPSALAGTEIVLEVMA*TSTPCF
Trigger: GAAGCAAGGTGTGGACGTCAAGGCCATGACCTCTAA...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAATTAGAGGTCATGGCCTaGACGTCCACACCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQLEVMA*TSTPCF
Trigger: GAAGCAAGGTGTGGACGTCAAGGCCATGACCTCTAA...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCCAGGATGGTCGGGCTaGTGGCGATGGTCGGGATTG +
Preference number: 5 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHPGWSG*WRWSGL
Trigger: CAATCCCGACCATCGCCACAAGCCCGACCATCCTGG...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp AAAATGGTTCACCGTGAGATCTGGCAGCGCCCCATGCAGCATCGGGAGCTTTGTCTCCTTAGTGGATTCTaGTGTTGGATGCAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KMVHREIWQRPMQHRELCLLSGF*CWMQGG
Trigger: TCCTCCTTGCATCCAACACAAGAATCCACTAAGGAG...ACAAAGCTCCCGATGCTGCATGGGGCGCTGCCAGATCTCACGGTGAACCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCGCACCCCACGGAGCTTaGGTGGCTGATCAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: VKTGLLIQKKELRPLPITAPHGA*VADQVQ
Trigger: CTGAACTTGATCAGCCACCAAAGCTCCGTGGGGTGC...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TTGTGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGAGGTCAGAGCAGCACCTaGGCCAGAGTCCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LCACVVKTGLLIQKKELRGQSST*ARVQGL
Trigger: CAGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGACC...TCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS GCA 90 bp CTAGGTGGGAATGTGGTCTGCTCCTTAGTGGATTCTTGTGTTGGATaGAAGGAGGAGGGCATTTGGCTGTCTAGAGAAGCAGTGGACCAT +
Preference number: 5 (lower is better)
Translates to: LGGNVVCSLVDSCVG*KEEGIWLSREAVDH
Trigger: ATGGTCCACTGCTTCTCTAGACAGCCAAATGCCCTCCTCCTTGCATCCAACACAAGAATCCACTAAGGAGCAGACCACATTCCCACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGAGCGAGGTCAGCCGGTaGAAGGAGACGTCCAGGACG +
Preference number: 5 (lower is better)
Translates to: PDTTSAHILINHFPDFLLSEVSR*KETSRT
Trigger: CGTCCTGGACGTCTCCTTCAACCGGCTGACCTCGCT...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCCTCCAACCCCCAACTAGATTCCAATAGGAGAGCCCACAGGCTCTTCTCTCAAAGCTCAGTCAAGTTGTaGTTAGCCAGACTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PSNPQLDSNRRAHRLFSQSSVKL*LARLSF
Trigger: GAAGCTCAGTCTGGCTAACAACAACTTGACTGAGCT...TTGAGAGAAGAGCCTGTGGGCTCTCCTATTGGAATCTAGTTGGGGGTTGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCCCGCCAAGTCCATGTCATTACCCCTTCTGCTTTGGCTGGGACTGAAATTGTGCTTGACGTCCACACCTaGCTTCCATACGTAGACATT +
Preference number: 5 (lower is better)
Translates to: PRQVHVITPSALAGTEIVLDVHT*LPYVDI
Trigger: AATGTCTACGTATGGAAGCAAGGTGTGGACGTCAAG...CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAATGACATGGACTTGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCGGGGTTGTATGGGCTTaGGTGGGGAACTTGACCACA +
Preference number: 5 (lower is better)
Translates to: VKTGLLIQKKELRPLPITGVVWA*VGNLTT
Trigger: TGTGGTCAAGTTCCCCACCAAAGCCCATACAACCCC...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCAGGTGTGTGGTTaGTGTGGCTGTGGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: CACVVKTGLLIQKKELRPLQVCG*CGCGQS
Trigger: GCTCTGACCACAGCCACACAAACCACACACCTGGAG...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCTCCAGGTGTGTGGTTaGTGTGGCTGTGGTCAGAGC +
Preference number: 5 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHLQVCG*CGCGQS
Trigger: GCTCTGACCACAGCCACACAAACCACACACCTGGAG...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp CTGGGTAGTAATCATATAGGTCTGTGTCACCTTCATCACCAAGGGTaGGGCACCCCTTTCCTGGGTATTTGTAGACGGGAAACTTGTCTG +
Preference number: 5 (lower is better)
Translates to: LGSNHIGLCHLHHQG*GTPFLGICRRETCL
Trigger: CAGACAAGTTTCCCGTCTACAAATACCCAGGAAAGGGGTGCCCCACCCTTGGTGATGAAGGTGACACAGACCTATATGATTACTACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCGGGAGCTCAGTCAAGTaGTTGTTAGCCAGACTGAGC +
Preference number: 5 (lower is better)
Translates to: VKTGLLIQKKELRPLPITGSSVK*LLARLS
Trigger: GCTCAGTCTGGCTAACAACAACTTGACTGAGCTCCC...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACGGGGTTGTATGGGCTTaGGTGGGGAACTTGACCACA +
Preference number: 5 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHGVVWA*VGNLTT
Trigger: TGTGGTCAAGTTCCCCACCAAAGCCCATACAACCCC...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACTTTCAGGTAGAGCTCTaGGAGTTCGCCAAGACCACG +
Preference number: 5 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHFQVEL*EFAKTT
Trigger: CGTGGTCTTGGCGAACTCCAAGAGCTCTACCTGAAA...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACGGGAGCTCAGTCAAGTaGTTGTTAGCCAGACTGAGC +
Preference number: 5 (lower is better)
Translates to: CEDRASDTEKGTKTPPYHGSSVK*LLARLS
Trigger: GCTCAGTCTGGCTAACAACAACTTGACTGAGCTCCC...GTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCATACAGCGAGTTCTCTaGGAGGAGAAGGGTGTCGAG +
Preference number: 5 (lower is better)
Translates to: CACVVKTGLLIQKKELRPIQRVL*EEKGVE
Trigger: CTCGACACCCTTCTCCTCCAAGAGAACTCGCTGTAT...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGTCAGGTGGAGGATGGTaGTGTCTTTCGGCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: PDTTSAHILINHFPDFLLSGGGW*CLSAGL
Trigger: CAGACCTGCCGAAAGACACAACCATCCTCCACCTGA...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAGCGCCAAAAGCCCTTTGGTATaGTATACAGCGAGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: WEPCCILPKWFTVRSGSAKSPLV*YTASSL
Trigger: AAGAGAACTCGCTGTATACAATACCAAAGGGCTTTT...GGCGCTGCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp GTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCCTCCCTATCACCCTTGACGTCCACACCTaGCTTCCATACGTAGACATT +
Preference number: 5 (lower is better)
Translates to: VKTGLLIQKKELRPLPITLDVHT*LPYVDI
Trigger: AATGTCTACGTATGGAAGCAAGGTGTGGACGTCAAG...GGTGATAGGGAGGGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TTGTGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGAGCTTTGGTGGGGAACTaGACCACAGTCCTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LCACVVKTGLLIQKKELRALVGN*TTVLVA
Trigger: TGCCACAAGGACTGTGGTCAAGTTCCCCACCAAAGC...TCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp CCAGACACAACGAGTGCTCACATCCTGATAAATCACTTTCCAGATTTTCTTCTGTTTCAGGTAGAGCTCTaGGAGTTCGCCAAGACCACG +
Preference number: 5 (lower is better)
Translates to: PDTTSAHILINHFPDFLLFQVEL*EFAKTT
Trigger: CGTGGTCTTGGCGAACTCCAAGAGCTCTACCTGAAA...CAGAAGAAAATCTGGAAAGTGATTTATCAGGATGTGAGCACTCGTTGTGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCAGCTCAGTCAAGTTGTaGTTAGCCAGACTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: CACVVKTGLLIQKKELRPSSVKL*LARLSF
Trigger: GAAGCTCAGTCTGGCTAACAACAACTTGACTGAGCT...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGTGCCTGTGTTGTGAAGACAGGGCTTCTGATACAGAAAAAGGAACTAAGACCCATTACCCCTTCTGCTTaGGCTGGGACTGAAATTGTG +
Preference number: 5 (lower is better)
Translates to: CACVVKTGLLIQKKELRPITPSA*AGTEIV
Trigger: CACAATTTCAGTCCCAGCCAAAGCAGAAGGGGTAAT...GGGTCTTAGTTCCTTTTTCTGTATCAGAAGCCCTGTCTTCACAACACAGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp TGTGATGGATTCCATGTGAAGTGTGAAATTTGGGGTCCATCTAGGTaGGAATGTGGTCTGCTCCTTAGTGGATTCTTGTGTTGGATGCAA +
Preference number: 5 (lower is better)
Translates to: CDGFHVKCEIWGPSR*ECGLLLSGFLCWMQ
Trigger: TTGCATCCAACACAAGAATCCACTAAGGAGCAGACCACATTCCCACCTAGATGGACCCCAAATTTCACACTTCACATGGAATCCATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 90 bp TGGAGTTTTGGAGAATGTGATGGATTCCATGTGAAGTGTGAAATTTaGGGTCCATCTAGGTGGGAATGTGGTCTGCTCCTTAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: WSFGECDGFHVKCEI*GPSRWECGLLLSGF
Trigger: GAATCCACTAAGGAGCAGACCACATTCCCACCTAGATGGACCCCAAATTTCACACTTCACATGGAATCCATCACATTCTCCAAAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS-3UTR CAA 90 bp TGCATGTGGGAACCATGCTGTATTCTGCCAAAATGGTTCACCGTGAGATCTGGCAAAAGCCCTTTGGTATaGTATACAGCGAGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: CMWEPCCILPKWFTVRSGKSPLV*YTASSL
Trigger: AAGAGAACTCGCTGTATACAATACCAAAGGGCTTTT...GCCAGATCTCACGGTGAACCATTTTGGCAGAATACAGCATGGTTCCCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 72 bp TGGTCGGGCTTGGAGTGGGCTCCAGGGTGGTCATGTTaGGGGCGGGCTCCGGGACGGGCTCTGAGGTGGTCG +
Preference number: 6 (lower is better)
Translates to: WSGLEWAPGWSC*GRAPGRALRWS
Trigger: CGACCACCTCAGAGCCCGTCCCGGAGCCCGCCCCAAACATGACCACCCTGGAGCCCACTCCAAGCCCGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp TTGTGGCAGACACCAGGATGGTCGGGCTTGTGGCGATaGTCGGGATTGGGGTGGGCTCCGGGGTGGTCGGGC +
Preference number: 6 (lower is better)
Translates to: LWQTPGWSGLWR*SGLGWAPGWSG
Trigger: GCCCGACCACCCCGGAGCCCACCCCAATCCCGACCATCGCCACAAGCCCGACCATCCTGGTGTCTGCCACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp TCAGGCTTGTGGCAGACACCAGGATGGTCGGGCTTGTaGCGATGGTCGGGATTGGGGTGGGCTCCGGGGTGG +
Preference number: 6 (lower is better)
Translates to: SGLWQTPGWSGL*RWSGLGWAPGW
Trigger: CCACCCCGGAGCCCACCCCAATCCCGACCATCGCCACAAGCCCGACCATCCTGGTGTCTGCCACAAGCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS TCA 72 bp GGTGGTCATGTTTGGGGCGGGCTCCGGGACGGGCTCTaGGGTGGTCGGGCTTGGGGTTGGTTCAGTAGTGGA +
Preference number: 6 (lower is better)
Translates to: GGHVWGGLRDGL*GGRAWGWFSSG
Trigger: TCCACTACTGAACCAACCCCAAGCCCGACCACCTCAGAGCCCGTCCCGGAGCCCGCCCCAAACATGACCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 72 bp CCACGCAGGGCACCAAGAGGCAGCGAGGTCAGCCGGTaGAAGGAGACGTCCAGGACGGTGAGAGCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: PRRAPRGSEVSR*KETSRTVRAGS
Trigger: ACTGCCTGCTCTCACCGTCCTGGACGTCTCCTTCAACCGGCTGACCTCGCTGCCTCTTGGTGCCCTGCGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 90 bp TCGCCAAGACCACGCAGGGCACCAAGAGGCAGCGAGGTCAGCCGGTaGAAGGAGACGTCCAGGACGGTGAGAGCAGGCAGTGTCTGCCCT +
Preference number: 6 (lower is better)
Translates to: SPRPRRAPRGSEVSR*KETSRTVRAGSVCP
Trigger: AGGGCAGACACTGCCTGCTCTCACCGTCCTGGACGTCTCCTTCAACCGGCTGACCTCGCTGCCTCTTGGTGCCCTGCGTGGTCTTGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 90 bp GGGCACTGTCACTTGCCGTCCCCTCTGCAGCTCCAGGTGTGTGGTTaGTGTGGCTGTGGTCAGAGCAGCACCTTGGCCAGAGTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: GHCHLPSPLQLQVCG*CGCGQSSTLARVQG
Trigger: GCCCTGGACTCTGGCCAAGGTGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCTGCAGAGGGGACGGCAAGTGACAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 90 bp AAGCGAACCTCGAAGGAAGAGCAGCCAGGCCCGGGGCACTGTCACTaGCCGTCCCCTCTGCAGCTCCAGGTGTGTGGTTTGTGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: KRTSKEEQPGPGHCH*PSPLQLQVCGLCGC
Trigger: ACAGCCACACAAACCACACACCTGGAGCTGCAGAGGGGACGGCAAGTGACAGTGCCCCGGGCCTGGCTGCTCTTCCTTCGAGGTTCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp TCCAGGGTCCCCAGCACTGGCAGCGTCCCATCGACCTaGAGCTTGGTGAGCTCGCACCTATCTAGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: SRVPSTGSVPST*SLVSSHLSRFS
Trigger: GCTGAACCTAGATAGGTGCGAGCTCACCAAGCTCCAGGTCGATGGGACGCTGCCAGTGCTGGGGACCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp CCCTCTGCAGCTCCAGGTGTGTGGTTTGTGTGGCTGTaGTCAGAGCAGCACCTTGGCCAGAGTCCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: PSAAPGVWFVWL*SEQHLGQSPGP
Trigger: AGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCTGCAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp GCCGTCCCCTCTGCAGCTCCAGGTGTGTGGTTTGTGTaGCTGTGGTCAGAGCAGCACCTTGGCCAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: AVPSAAPGVWFV*LWSEQHLGQSP
Trigger: TGGACTCTGGCCAAGGTGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCTGCAGAGGGGACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 90 bp CCCTGGGGGCAGGGTCTTCAGCTCATTGCCTTTCAGGTAGAGCTCTaGGAGTTCGCCAAGACCACGCAGGGCACCAAGAGGCAGCGAGGT +
Preference number: 6 (lower is better)
Translates to: PWGQGLQLIAFQVEL*EFAKTTQGTKRQRG
Trigger: ACCTCGCTGCCTCTTGGTGCCCTGCGTGGTCTTGGCGAACTCCAAGAGCTCTACCTGAAAGGCAATGAGCTGAAGACCCTGCCCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS TCA 72 bp GGCAGTGTCTGCCCTAGCAAGGGCAGGCTTTGCAGCTaGTTGTGGGATAGATCCAGGGTCCCCAGCACTGGC +
Preference number: 6 (lower is better)
Translates to: GSVCPSKGRLCS*LWDRSRVPSTG
Trigger: GCCAGTGCTGGGGACCCTGGATCTATCCCACAATCAGCTGCAAAGCCTGCCCTTGCTAGGGCAGACACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp CTTCTAGGTGGCTGGCCACTTTGGAGACCTCACAGATaGGGTGGGGGTGTAAGGGGCTTGGCAGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: LLGGWPLWRPHR*GGGVRGLAAGA
Trigger: TGCTCCTGCTGCCAAGCCCCTTACACCCCCACCCCATCTGTGAGGTCTCCAAAGTGGCCAGCCACCTAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp GAGCTTCTCCAGCTTGGGTGTGGGCGTCAGGAGCCCTaGGGGCAGGGTCTTCAGCTCATTGCCTTTCAGGTA +
Preference number: 6 (lower is better)
Translates to: ELLQLGCGRQEP*GQGLQLIAFQV
Trigger: TACCTGAAAGGCAATGAGCTGAAGACCCTGCCCCCAGGGCTCCTGACGCCCACACCCAAGCTGGAGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 72 bp CACTTGCCGTCCCCTCTGCAGCTCCAGGTGTGTGGTTaGTGTGGCTGTGGTCAGAGCAGCACCTTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: HLPSPLQLQVCG*CGCGQSSTLAR
Trigger: TCTGGCCAAGGTGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCTGCAGAGGGGACGGCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 90 bp CAGCTCCAGGTGTGTGGTTTGTGTGGCTGTGGTCAGAGCAGCACCTaGGCCAGAGTCCAGGGCCTGTGGTTTCACATGCCCAACCCAGCT +
Preference number: 6 (lower is better)
Translates to: QLQVCGLCGCGQSST*ARVQGLWFHMPNPA
Trigger: AGCTGGGTTGGGCATGTGAAACCACAGGCCCTGGACTCTGGCCAAGGTGCTGCTCTGACCACAGCCACACAAACCACACACCTGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 90 bp CCAGGGAGAAGGTGTACAGGAGGTTCTCACTCAGGTGGAGGATGGTaGTGTCTTTCGGCAGGTCTGGAGGCAGCGCTGTCAGATTCCTCT +
Preference number: 6 (lower is better)
Translates to: PGRRCTGGSHSGGGW*CLSAGLEAALSDSS
Trigger: AGAGGAATCTGACAGCGCTGCCTCCAGACCTGCCGAAAGACACAACCATCCTCCACCTGAGTGAGAACCTCCTGTACACCTTCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS GCA 72 bp AGAAAGACCTCCGAAGGCACAGAGCGTCTTCTAGGGTaGCACTCGACTCCGTCCTTCTCTCTTCTAGCCCCA +
Preference number: 6 (lower is better)
Translates to: RKTSEGTERLLG*HSTPSFSLLAP
Trigger: TGGGGCTAGAAGAGAGAAGGACGGAGTCGAGTGGCACCCTAGAAGACGCTCTGTGCCTTCGGAGGTCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329125.6
CDS CCA 72 bp AGAAGGTGTACAGGAGGTTCTCACTCAGGTGGAGGATaGTTGTGTCTTTCGGCAGGTCTGGAGGCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: RRCTGGSHSGGG*LCLSAGLEAAL
Trigger: CAGCGCTGCCTCCAGACCTGCCGAAAGACACAACCATCCTCCACCTGAGTGAGAACCTCCTGTACACCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 72 bp CTCTTGTCACAGTTCACTTCTAGGTGGCTGGCCACTTaGGAGACCTCACAGATGGGGTGGGGGTGTAAGGGG +
Preference number: 6 (lower is better)
Translates to: LLSQFTSRWLAT*ETSQMGWGCKG
Trigger: CCCCTTACACCCCCACCCCATCTGTGAGGTCTCCAAAGTGGCCAGCCACCTAGAAGTGAACTGTGACAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 72 bp AGGTGTACAGGAGGTTCTCACTCAGGTGGAGGATGGTaGTGTCTTTCGGCAGGTCTGGAGGCAGCGCTGTCA +
Preference number: 6 (lower is better)
Translates to: RCTGGSHSGGGW*CLSAGLEAALS
Trigger: TGACAGCGCTGCCTCCAGACCTGCCGAAAGACACAACCATCCTCCACCTGAGTGAGAACCTCCTGTACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 72 bp CAGGGTCTTCAGCTCATTGCCTTTCAGGTAGAGCTCTaGGAGTTCGCCAAGACCACGCAGGGCACCAAGAGG +
Preference number: 6 (lower is better)
Translates to: QGLQLIAFQVEL*EFAKTTQGTKR
Trigger: CCTCTTGGTGCCCTGCGTGGTCTTGGCGAACTCCAAGAGCTCTACCTGAAAGGCAATGAGCTGAAGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 72 bp CCATTCAGGAGCCCAGCGGGGAGCTCAGTCAAGTTGTaGTTAGCCAGACTGAGCTTCTCCAGCTTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: PFRSPAGSSVKL*LARLSFSSLGV
Trigger: CACACCCAAGCTGGAGAAGCTCAGTCTGGCTAACAACAACTTGACTGAGCTCCCCGCTGGGCTCCTGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 90 bp GTTGTGTCTTTCGGCAGGTCTGGAGGCAGCGCTGTCAGATTCCTCTaGTCACAGTTCACTTCTAGGTGGCTGGCCACTTTGGAGACCTCA +
Preference number: 6 (lower is better)
Translates to: VVSFGRSGGSAVRFL*SQFTSRWLATLETS
Trigger: TGAGGTCTCCAAAGTGGCCAGCCACCTAGAAGTGAACTGTGACAAGAGGAATCTGACAGCGCTGCCTCCAGACCTGCCGAAAGACACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 90 bp CTGCACACTGGCCACGTTAGAGGTCATGGCCTTGACGTCCACACCTaGCTTCCATACGTAGACATTTTCAGCATTGTCCTGCAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: LHTGHVRGHGLDVHT*LPYVDIFSIVLQPA
Trigger: CGCTGGCTGCAGGACAATGCTGAAAATGTCTACGTATGGAAGCAAGGTGTGGACGTCAAGGCCATGACCTCTAACGTGGCCAGTGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp TCAGATTCCTCTTGTCACAGTTCACTTCTAGGTGGCTaGCCACTTTGGAGACCTCACAGATGGGGTGGGGGT +
Preference number: 6 (lower is better)
Translates to: SDSSCHSSLLGG*PLWRPHRWGGG
Trigger: ACCCCCACCCCATCTGTGAGGTCTCCAAAGTGGCCAGCCACCTAGAAGTGAACTGTGACAAGAGGAATCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp ACTCAGGTGGAGGATGGTTGTGTCTTTCGGCAGGTCTaGAGGCAGCGCTGTCAGATTCCTCTTGTCACAGTT +
Preference number: 6 (lower is better)
Translates to: TQVEDGCVFRQV*RQRCQIPLVTV
Trigger: AACTGTGACAAGAGGAATCTGACAGCGCTGCCTCCAGACCTGCCGAAAGACACAACCATCCTCCACCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 72 bp GAGAAAAGGGTCATTTCTGGAGCTCTCCAAATGCCCTaGGAGCACCCCACGGAGCTTTGGTGGCTGATCAAG +
Preference number: 6 (lower is better)
Translates to: EKRVISGALQMP*EHPTELWWLIK
Trigger: CTTGATCAGCCACCAAAGCTCCGTGGGGTGCTCCAAGGGCATTTGGAGAGCTCCAGAAATGACCCTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CAA 72 bp GGCCACGTTAGAGGTCATGGCCTTGACGTCCACACCTaGCTTCCATACGTAGACATTTTCAGCATTGTCCTG +
Preference number: 6 (lower is better)
Translates to: GHVRGHGLDVHT*LPYVDIFSIVL
Trigger: CAGGACAATGCTGAAAATGTCTACGTATGGAAGCAAGGTGTGGACGTCAAGGCCATGACCTCTAACGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS TCA 72 bp CCCCTTTCCTGGGTATTTGTAGACGGGAAACTTGTCTaGATTGTCACACTGCACACTGGCCACGTTAGAGGT +
Preference number: 6 (lower is better)
Translates to: PLSWVFVDGKLV*IVTLHTGHVRG
Trigger: ACCTCTAACGTGGCCAGTGTGCAGTGTGACAATTCAGACAAGTTTCCCGTCTACAAATACCCAGGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp AATCATATAGGTCTGTGTCACCTTCATCACCAAGGGTaGGGCACCCCTTTCCTGGGTATTTGTAGACGGGAA +
Preference number: 6 (lower is better)
Translates to: NHIGLCHLHHQG*GTPFLGICRRE
Trigger: TTCCCGTCTACAAATACCCAGGAAAGGGGTGCCCCACCCTTGGTGATGAAGGTGACACAGACCTATATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS GCA 72 bp GTGAAATTTGGGGTCCATCTAGGTGGGAATGTGGTCTaGTCCTTAGTGGATTCTTGTGTTGGATGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: VKFGVHLGGNVV*SLVDSCVGCKE
Trigger: CTCCTTGCATCCAACACAAGAATCCACTAAGGAGCAGACCACATTCCCACCTAGATGGACCCCAAATTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp AAAAAGCCCTTTGGTATTGTATACAGCGAGTTCTCTTaGAGGAGAAGGGTGTCGAGATTCTCCAGCCCATTC +
Preference number: 6 (lower is better)
Translates to: KKPFGIVYSEFS*RRRVSRFSSPF
Trigger: GAATGGGCTGGAGAATCTCGACACCCTTCTCCTCCAAGAGAACTCGCTGTATACAATACCAAAGGGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp GGAGAATGTGATGGATTCCATGTGAAGTGTGAAATTTaGGGTCCATCTAGGTGGGAATGTGGTCTGCTCCTT +
Preference number: 6 (lower is better)
Translates to: GECDGFHVKCEI*GPSRWECGLLL
Trigger: AAGGAGCAGACCACATTCCCACCTAGATGGACCCCAAATTTCACACTTCACATGGAATCCATCACATTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1
CDS CCA 72 bp TTCCATGTGAAGTGTGAAATTTGGGGTCCATCTAGGTaGGAATGTGGTCTGCTCCTTAGTGGATTCTTGTGT +
Preference number: 6 (lower is better)
Translates to: FHVKCEIWGPSR*ECGLLLSGFLC
Trigger: ACACAAGAATCCACTAAGGAGCAGACCACATTCCCACCTAGATGGACCCCAAATTTCACACTTCACATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329125.6
ENST00000611961.1