Pregenerated sensors for GOT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000125166

Ensembl transcript IDs: ENST00000496461.5, ENST00000568368.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	GTCTGCACAGTGACAAACTGGGATGATGCCAGAGCCTaGTCAGCTTACCCGGCCACTCTTCAAGACTTCGCT	+
Preference number: 3 (lower is better) Translates to: VCTVTNWDDARA*SAYPATLQDFA Trigger: AGCGAAGTCTTGAAGAGTGGCCGGGTAAGCTGAGCAGGCTCTGGCATCATCCCAGTTTGTCACTGTGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568368.1
CDS-3UTR GCA 90 bp	GGGATGATGCCAGAGCCTGCTCAGCTTACCCGGCCACTCTTCAAGACTTCGCTGAGGACGCGGCCGGAGTaGAGCAGGGCCATGGTGGAC	+
Preference number: 4 (lower is better) Translates to: GMMPEPAQLTRPLFKTSLRTRPE*SRAMVD Trigger: GTCCACCATGGCCCTGCTGCACTCCGGCCGCGTCCT...CAGCGAAGTCTTGAAGAGTGGCCGGGTAAGCTGAGCAGGCTCTGGCATCATCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568368.1
CDS-3UTR CCA 90 bp	AACTGGGATGATGCCAGAGCCTGCTCAGCTTACCCGGCCACTCTTCAAGACTTCATCTGGGCCTCTGCCTaGCTCTGGCAGAGGCCGCGG	+
Preference number: 4 (lower is better) Translates to: NWDDARACSAYPATLQDFIWASA*LWQRPR Trigger: CCGCGGCCTCTGCCAGAGCCAGGCAGAGGCCCAGAT...GAAGTCTTGAAGAGTGGCCGGGTAAGCTGAGCAGGCTCTGGCATCATCCCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568368.1
CDS-3UTR GCA 90 bp	AACTGGGATGATGCCAGAGCCTGCTCAGCTTACCCGGCCACTCTTCAAGACTTCGGCAATCTGGGCCTCTaGCTGGCTCTGGCAGAGGCC	+
Preference number: 4 (lower is better) Translates to: NWDDARACSAYPATLQDFGNLGL*LALAEA Trigger: GGCCTCTGCCAGAGCCAGGCAGAGGCCCAGATTGCC...GAAGTCTTGAAGAGTGGCCGGGTAAGCTGAGCAGGCTCTGGCATCATCCCAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568368.1
CDS-3UTR TCA 90 bp	GGGATGATGCCAGAGCCTGCTCAGCTTACCCGGCCACTCTTCAAGACTTCGCTGAGTGACAAACTGGGATaGTGCCAGAGCCTGCTCAGC	+
Preference number: 4 (lower is better) Translates to: GMMPEPAQLTRPLFKTSLSDKLG*CQSLLS Trigger: GCTGAGCAGGCTCTGGCATCATCCCAGTTTGTCACT...CAGCGAAGTCTTGAAGAGTGGCCGGGTAAGCTGAGCAGGCTCTGGCATCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568368.1
CDS-3UTR GCA 90 bp	AACTGGGATGATGCCAGAGCCTGCTCAGCTTACCCGGCCACTCTTCAAGACTTCGATGATGCCAGAGCCTaGTCAGCTTACCCGGCCACT	+
Preference number: 4 (lower is better) Translates to: NWDDARACSAYPATLQDFDDARA*SAYPAT Trigger: AGTGGCCGGGTAAGCTGAGCAGGCTCTGGCATCATC...GAAGTCTTGAAGAGTGGCCGGGTAAGCTGAGCAGGCTCTGGCATCATCCCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568368.1
CDS-3UTR TCA 90 bp	AACTGGGATGATGCCAGAGCCTGCTCAGCTTACCCGGCCACTCTTCAAGACTTCAAATGGTCTGCACAGTaGCAAACTGGGATGATGCCA	+
Preference number: 4 (lower is better) Translates to: NWDDARACSAYPATLQDFKWSAQ*QTGMMP Trigger: TGGCATCATCCCAGTTTGTCACTGTGCAGACCATTT...GAAGTCTTGAAGAGTGGCCGGGTAAGCTGAGCAGGCTCTGGCATCATCCCAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568368.1
CDS CAA 90 bp	CAGAACCCTGGGAATCAGCTCTTCCCCAGTATTTTAACTCAGATATaGGGACATGGTGGGAGACATCAAATGTCCGCAAGCAAGGAGTTT	+
Preference number: 6 (lower is better) Translates to: QNPGNQLFPSILTQI*GHGGRHQMSASKEF Trigger: AAACTCCTTGCTTGCGGACATTTGATGTCTCCCACCATGTCCCAATATCTGAGTTAAAATACTGGGGAAGAGCTGATTCCCAGGGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496461.5
CDS CAA 72 bp	AATGGTTTATCTGAAATGCCACAGGATCGTCATCATTaGATAAGTAACAAAGGTAACCAGAACCCTGGGAAT	+
Preference number: 6 (lower is better) Translates to: NGLSEMPQDRHH*ISNKGNQNPGN Trigger: ATTCCCAGGGTTCTGGTTACCTTTGTTACTTATCAAATGATGACGATCCTGTGGCATTTCAGATAAACCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496461.5