Pregenerated sensors for GOT1L1 (Homo sapiens)
Ensembl gene IDs: ENSG00000169154Ensembl transcript IDs: ENST00000307599.5, ENST00000518826.3, ENST00000524298.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCACGAGAGAAACCCAGGGATGGCCTTCATTTGTCATGCAGACTGTaGGGAAAACCACAGAGGGAGCTCCAGATGCCTGGTTTGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PREKPRDGLHLSCRL*GKPQRELQMPGLGP Trigger: GGGGCCCAAACCAGGCATCTGGAGCTCCCTCTGTGGTTTTCCTCACAGTCTGCATGACAAATGAAGGCCATCCCTGGGTTTCTCTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524298.1 |
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| CDS CCA 90 bp | ATACGAGCATCCTTATGCCAAGCTCTGAGAAACTGGACGCCAAGCTaGAAGGCACCACTGTCACCAACAGTGTGTACACCCCCTACCCTG | + |
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Preference number: 5 (lower is better) Translates to: IRASLCQALRNWTPS*KAPLSPTVCTPPTL Trigger: CAGGGTAGGGGGTGTACACACTGTTGGTGACAGTGGTGCCTTCCAGCTTGGCGTCCAGTTTCTCAGAGCTTGGCATAAGGATGCTCGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000307599.5 ENST00000524298.1 |
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| CDS GCA 90 bp | ACAGTGTGTACACCCCCTACCCTGTTCTCCACAATGGCTTGGCTGTaGTTTCCAAAGAGGAGTGCTAGAGAGGCCTGGATGAATGATTTC | + |
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Preference number: 5 (lower is better) Translates to: TVCTPPTLFSTMAWL*FPKRSAREAWMNDF Trigger: GAAATCATTCATCCAGGCCTCTCTAGCACTCCTCTTTGGAAAGCACAGCCAAGCCATTGTGGAGAACAGGGTAGGGGGTGTACACACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000307599.5 ENST00000524298.1 |
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| CDS CCA 90 bp | GAAATCTGTAGTCGAGTCTTCTGCACCACGAGAGAAACCCAGGGATaGCCTTCATTTGTCATGCAGACTGTGAGGAAAACCACAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: EICSRVFCTTRETQG*PSFVMQTVRKTTEG Trigger: TCCCTCTGTGGTTTTCCTCACAGTCTGCATGACAAATGAAGGCCATCCCTGGGTTTCTCTCGTGGTGCAGAAGACTCGACTACAGATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524298.1 |
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| CDS CCA 90 bp | TATCTGCTTGCTCTTTATCATGGACATCAACTTTGCCCACCCACTTaGTGTCAACTTGCAGTCGATAATGTTCCCCATCACAAGGACACA | + |
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Preference number: 5 (lower is better) Translates to: YLLALYHGHQLCPPT*CQLAVDNVPHHKDT Trigger: TGTGTCCTTGTGATGGGGAACATTATCGACTGCAAGTTGACACCAAGTGGGTGGGCAAAGTTGATGTCCATGATAAAGAGCAAGCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307599.5 |
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| CDS GCA 90 bp | CCACTCCTTCATCATAAATGCCAAAATTCTTGGACAGAGACTGGCTaGAGAAGAACTCAAAGCCTTGAGACACAAAGTATTGTAAGATTC | + |
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Preference number: 5 (lower is better) Translates to: PLLHHKCQNSWTETG*RRTQSLETQSIVRF Trigger: GAATCTTACAATACTTTGTGTCTCAAGGCTTTGAGTTCTTCTGCAGCCAGTCTCTGTCCAAGAATTTTGGCATTTATGATGAAGGAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307599.5 ENST00000518826.3 |
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| CDS GCA 72 bp | CCAAGACTATGTGTCTCTGCTCCTGTGTTCCGCTTCTaGCCAGAAGTCTTCCTCCAAGGCTGGGCCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PRLCVSAPVFRF*PEVFLQGWAGQ Trigger: CTGCCCGGCCCAGCCTTGGAGGAAGACTTCTGGGCAGAAGCGGAACACAGGAGCAGAGACACATAGTCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307599.5 |
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| CDS CCA 72 bp | TCCTTATGCCAAGCTCTGAGAAACTGGACGCCAAGCTaGAAGGCACCACTGTCACCAACAGTGTGTACACCC | + |
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Preference number: 6 (lower is better) Translates to: SLCQALRNWTPS*KAPLSPTVCTP Trigger: GGGTGTACACACTGTTGGTGACAGTGGTGCCTTCCAGCTTGGCGTCCAGTTTCTCAGAGCTTGGCATAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000307599.5 ENST00000524298.1 |
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| CDS TCA 72 bp | AAACCCAGGGATGGCCTTCATTTGTCATGCAGACTGTaGGGAAAACCACAGAGGGAGCTCCAGATGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: KPRDGLHLSCRL*GKPQRELQMPG Trigger: ACCAGGCATCTGGAGCTCCCTCTGTGGTTTTCCTCACAGTCTGCATGACAAATGAAGGCCATCCCTGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524298.1 |
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| CDS CCA 72 bp | CAACAGTGTGTACACCCCCTACCCTGTTCTCCACAATaGCTTGGCTGTGCTTTCCAAAGAGGAGTGCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: QQCVHPLPCSPQ*LGCAFQRGVLE Trigger: CTCTAGCACTCCTCTTTGGAAAGCACAGCCAAGCCATTGTGGAGAACAGGGTAGGGGGTGTACACACTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000307599.5 ENST00000524298.1 |
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| CDS GCA 72 bp | AGGGAGGGATCCTGTGAAATCTGTAGTCGAGTCTTCTaGACCACGAGAGAAACCCAGGGATGGCCTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: REGSCEICSRVF*TTRETQGWPSF Trigger: AAATGAAGGCCATCCCTGGGTTTCTCTCGTGGTGCAGAAGACTCGACTACAGATTTCACAGGATCCCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000307599.5 ENST00000524298.1 |
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| CDS CCA 72 bp | ACTATACGAGCATCCTTATGCCAAGCTCTGAGAAACTaGACGCCAAGCTGGAAGGCACCACTGTCACCAACA | + |
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Preference number: 6 (lower is better) Translates to: TIRASLCQALRN*TPSWKAPLSPT Trigger: TGTTGGTGACAGTGGTGCCTTCCAGCTTGGCGTCCAGTTTCTCAGAGCTTGGCATAAGGATGCTCGTATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000307599.5 ENST00000524298.1 |
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| CDS CAA 90 bp | CTCTTTATCATGGACATCAACTTTGCCCACCCACTTGGTGTCAACTaGCAGTCGATAATGTTCCCCATCACAAGGACACAGCCATGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LFIMDINFAHPLGVN*QSIMFPITRTQPCG Trigger: CCCACATGGCTGTGTCCTTGTGATGGGGAACATTATCGACTGCAAGTTGACACCAAGTGGGTGGGCAAAGTTGATGTCCATGATAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307599.5 |
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| CDS CAA 72 bp | ATGGACATCAACTTTGCCCACCCACTTGGTGTCAACTaGCAGTCGATAATGTTCCCCATCACAAGGACACAG | + |
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Preference number: 6 (lower is better) Translates to: MDINFAHPLGVN*QSIMFPITRTQ Trigger: CTGTGTCCTTGTGATGGGGAACATTATCGACTGCAAGTTGACACCAAGTGGGTGGGCAAAGTTGATGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307599.5 |
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| CDS CCA 72 bp | GCTCTTTATCATGGACATCAACTTTGCCCACCCACTTaGTGTCAACTTGCAGTCGATAATGTTCCCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: ALYHGHQLCPPT*CQLAVDNVPHH Trigger: GTGATGGGGAACATTATCGACTGCAAGTTGACACCAAGTGGGTGGGCAAAGTTGATGTCCATGATAAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307599.5 |
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| CDS CAA 72 bp | TCTGCACCACGAGAGAAACCCAGGGATGGCCTTCATTaGTCATGCAGACTCTATAGGCTAAGAATATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SAPREKPRDGLH*SCRLYRLRISC Trigger: ACAAGATATTCTTAGCCTATAGAGTCTGCATGACAAATGAAGGCCATCCCTGGGTTTCTCTCGTGGTGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307599.5 |
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| CDS TCA 72 bp | GGAAGACGAGTCCATGCAGTTCTTTTTGAGAAGAGATaGTGTAAACTATACGAGCATCCTTATGCCAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GRRVHAVLFEKR*CKLYEHPYAKL Trigger: GAGCTTGGCATAAGGATGCTCGTATAGTTTACATCATCTCTTCTCAAAAAGAACTGCATGGACTCGTCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307599.5 |
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| CDS GCA 72 bp | GAATATCTGCTTGCTCTTTATCATGGACATCAACTTTaGCCACCCACTTGGTGTCAACTTGCAGTCGATAAT | + |
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Preference number: 6 (lower is better) Translates to: EYLLALYHGHQL*PPTWCQLAVDN Trigger: ATTATCGACTGCAAGTTGACACCAAGTGGGTGGGCAAAGTTGATGTCCATGATAAAGAGCAAGCAGATATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307599.5 |
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| CDS GCA 72 bp | CATCATAAATGCCAAAATTCTTGGACAGAGACTGGCTaGAGAAGAACTCAAAGCCTTGAGACACAAAGTATT | + |
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Preference number: 6 (lower is better) Translates to: HHKCQNSWTETG*RRTQSLETQSI Trigger: AATACTTTGTGTCTCAAGGCTTTGAGTTCTTCTGCAGCCAGTCTCTGTCCAAGAATTTTGGCATTTATGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307599.5 ENST00000518826.3 |
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