Pregenerated sensors for GOSR2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000261886Ensembl transcript IDs: ENST00000572349.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCGAACATGTACACCGCCTTGCCCTTCACGTGAAGCCGAGCCTGTaGCTACACTTATCCTTCCGTCGCCGGCCTCATTTCTCCTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: SEHVHRLALHVKPSL*LHLSFRRRPHFSFP Trigger: GGGGAAGGAGAAATGAGGCCGGCGACGGAAGGATAAGTGTAGTCACAGGCTCGGCTTCACGTGAAGGGCAAGGCGGTGTACATGTTCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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| CDS TCA 90 bp | GGACCTCTCGTTAGTATCCCGCGATTGTCCTTCCTAACGCCTGACTaGATCCTGAGGCTAGCCTTCAGCGAACATGTACACCGCCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: GPLVSIPRLSFLTPD*ILRLAFSEHVHRLA Trigger: GGCAAGGCGGTGTACATGTTCGCTGAAGGCTAGCCTCAGGATTCAGTCAGGCGTTAGGAAGGACAATCGCGGGATACTAACGAGAGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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| CDS TCA 90 bp | CGGCAGAGAACAGCAGATGATAGCGGCTCGCCTTCAACTTTGCTCTaGGGACCTCTCGTTAGTATCCCGCGATTGTCCTTCCTAACGCCT | + |
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Preference number: 5 (lower is better) Translates to: RQRTADDSGSPSTLL*GPLVSIPRLSFLTP Trigger: AGGCGTTAGGAAGGACAATCGCGGGATACTAACGAGAGGTCCTCAGAGCAAAGTTGAAGGCGAGCCGCTATCATCTGCTGTTCTCTGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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| CDS TCA 72 bp | GTACACCGCCTTGCCCTTCACGTGAAGCCGAGCCTGTaGCTACACTTATCCTTCCGTCGCCGGCCTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: VHRLALHVKPSL*LHLSFRRRPHF Trigger: GAAATGAGGCCGGCGACGGAAGGATAAGTGTAGTCACAGGCTCGGCTTCACGTGAAGGGCAAGGCGGTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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| CDS GCA 72 bp | CCTGAGGCTAGCCTTCAGCGAACATGTACACCGCCTTaGCCTTCACGTGAAGCCGAGCCTGTGACTACACTT | + |
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Preference number: 6 (lower is better) Translates to: PEASLQRTCTPP*PSREAEPVTTL Trigger: AAGTGTAGTCACAGGCTCGGCTTCACGTGAAGGGCAAGGCGGTGTACATGTTCGCTGAAGGCTAGCCTCAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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| CDS TCA 72 bp | CCTTCAGCGAACATGTACACCGCCTTGCCCTTCACGTaGAGCCGAGCCTGTGACTACACTTATCCTTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: PSANMYTALPFT*SRACDYTYPSV Trigger: GACGGAAGGATAAGTGTAGTCACAGGCTCGGCTTCACGTGAAGGGCAAGGCGGTGTACATGTTCGCTGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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| CDS TCA 72 bp | ACAGCAGATGATAGCGGCTCGCCTTCAACTTTGCTCTaGGGACCTCTCGTTAGTATCCCGCGATTGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TADDSGSPSTLL*GPLVSIPRLSF Trigger: GAAGGACAATCGCGGGATACTAACGAGAGGTCCTCAGAGCAAAGTTGAAGGCGAGCCGCTATCATCTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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| CDS TCA 72 bp | GTTAGTATCCCGCGATTGTCCTTCCTAACGCCTGACTaGATCCTGAGGCTAGCCTTCAGCGAACATGTACAC | + |
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Preference number: 6 (lower is better) Translates to: VSIPRLSFLTPD*ILRLAFSEHVH Trigger: GTGTACATGTTCGCTGAAGGCTAGCCTCAGGATTCAGTCAGGCGTTAGGAAGGACAATCGCGGGATACTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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| CDS GCA 72 bp | AGAGAACAGCAGATGATAGCGGCTCGCCTTCAACTTTaGTCTGAGGACCTCTCGTTAGTATCCCGCGATTGT | + |
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Preference number: 6 (lower is better) Translates to: REQQMIAARLQL*SEDLSLVSRDC Trigger: ACAATCGCGGGATACTAACGAGAGGTCCTCAGAGCAAAGTTGAAGGCGAGCCGCTATCATCTGCTGTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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| CDS CCA 72 bp | AGCTCACAGTTCTGGAGGTTGGTAAGTCCAAGAGCATaGCACCGTCATTCAATCCAGCATCAACTCAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSQFWRLVSPRA*HRHSIQHQLKS Trigger: GCTTTTGAGTTGATGCTGGATTGAATGACGGTGCCATGCTCTTGGACTTACCAACCTCCAGAACTGTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572349.1 |
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