RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GOSR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000108587

Ensembl transcript IDs: ENST00000225724.9, ENST00000414833.2, ENST00000427274.6, ENST00000451249.7, ENST00000467337.6, ENST00000477885.1, ENST00000494918.1, ENST00000579905.1, ENST00000581721.5

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGGCGTGGCGGCGCTCGCCTGCAATTGCAGGCACTCGGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGG +
Preference number: 1 (lower is better)
Translates to: SGVAALACNCRHSAG*GRRIRQGGCSEPRW
Trigger: CCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCAATTGCAGGCGAGCGCCGCCACGCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 90 bp GCTTCGGCTCGGCATCAGAGGGAGACCGTGGAAAGAGGGAGACCGTaGGGAGAGGGAGAGGGAGAGGGAAGAATTATTTTTATTCACAAT +
Preference number: 1 (lower is better)
Translates to: ASARHQRETVERGRP*GEGEGEGRIIFIHN
Trigger: ATTGTGAATAAAAATAATTCTTCCCTCTCCCTCTCCCTCTCCCCACGGTCTCCCTCTTTCCACGGTCTCCCTCTGATGCCGAGCCGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 90 bp AAGAGCTCAAATCCCTTCATGGGATCCCCACGGAGCCCCTTCCTGTaGACACACACCTCTCTTCCCTTGCTGGAGGTTTCTTTCTGCAAA +
Preference number: 1 (lower is better)
Translates to: KSSNPFMGSPRSPFL*THTSLPLLEVSFCK
Trigger: TTTGCAGAAAGAAACCTCCAGCAAGGGAAGAGAGGTGTGTGTCCACAGGAAGGGGCTCCGTGGGGATCCCATGAAGGGATTTGAGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 90 bp AAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATaGGGAGGAGCAGTGGGGGCACTGACAGACACTGGTGATTCGTTT +
Preference number: 1 (lower is better)
Translates to: KLSSPLPQLPVSMLV*GGAVGALTDTGDSF
Trigger: AAACGAATCACCAGTGTCTGTCAGTGCCCCCACTGCTCCTCCTCATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 90 bp AATGGAAAGGCCCATCAGCCATCAACAGGGTTTGCTTGGCTGCAGTaGGCTAGACTAGCTTGTGTCCCAGTTCACTCTCACACAATCAGC +
Preference number: 1 (lower is better)
Translates to: NGKAHQPSTGFAWLQ*ARLACVPVHSHTIS
Trigger: GCTGATTGTGTGAGAGTGAACTGGGACACAAGCTAGTCTAGCTCACTGCAGCCAAGCAAACCCTGTTGATGGCTGATGGGCCTTTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 90 bp CTCTGTACCAAACCAGGTGTTAGTCCACCCATGAGCAAGTTCGCCTaGATAACAGCATCTATACACCATGATGTAGCTGAGAACTACAGC +
Preference number: 1 (lower is better)
Translates to: LCTKPGVSPPMSKFA*ITASIHHDVAENYS
Trigger: GCTGTAGTTCTCAGCTACATCATGGTGTATAGATGCTGTTATTCAGGCGAACTTGCTCATGGGTGGACTAACACCTGGTTTGGTACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 90 bp ACAGGTGCAGAGAGAGACAGATTCTGCCACATGCACCCTCAACAGTaGAACCATTCTCTGGATGTTTGGAAATGCTTAACAGATTTGGAA +
Preference number: 1 (lower is better)
Translates to: TGAERDRFCHMHPQQ*NHSLDVWKCLTDLE
Trigger: TTCCAAATCTGTTAAGCATTTCCAAACATCCAGAGAATGGTTTCACTGTTGAGGGTGCATGTGGCAGAATCTGTCTCTCTCTGCACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR GCA 90 bp TTAGCCACTGCACCCAGCCAATTCTACAATTGTAGATTCCCATTATaGCTCCTGAAGTTTCATGTTAAGAGATTCCCCTTCACTTCTAGG +
Preference number: 1 (lower is better)
Translates to: LATAPSQFYNCRFPL*LLKFHVKRFPFTSR
Trigger: CCTAGAAGTGAAGGGGAATCTCTTAACATGAAACTTCAGGAGGCATAATGGGAATCTACAATTGTAGAATTGGCTGGGTGCAGTGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 90 bp TTGGATGTAGAAACCTGGTTTTCTGAAGAGCCCAGCTGTAAGACCTaGCTTGTCATTAGGCTTCAACACTATCATGGAAACACAGAAAAC +
Preference number: 1 (lower is better)
Translates to: LDVETWFSEEPSCKT*LVIRLQHYHGNTEN
Trigger: GTTTTCTGTGTTTCCATGATAGTGTTGAAGCCTAATGACAAGCCAGGTCTTACAGCTGGGCTCTTCAGAAAACCAGGTTTCTACATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 90 bp CTGCACCCAGCCAATTCTACAATTGTAGATTCCCATTATGCCTCCTaGAGTTTCATGTTAAGAGATTCCCCTTCACTTCTAGGGCTAAAA +
Preference number: 1 (lower is better)
Translates to: LHPANSTIVDSHYAS*SFMLRDSPSLLGLK
Trigger: TTTTAGCCCTAGAAGTGAAGGGGAATCTCTTAACATGAAACTTCAGGAGGCATAATGGGAATCTACAATTGTAGAATTGGCTGGGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 90 bp GCTTTTCAGCACCTGTATTATTTCATCCTGGGTTTCAGGACATCATaGGAAACACTTATCAACACCAGAGATACCATAATCTCTATCCCC +
Preference number: 1 (lower is better)
Translates to: AFQHLYYFILGFRTS*ETLINTRDTIISIP
Trigger: GGGGATAGAGATTATGGTATCTCTGGTGTTGATAAGTGTTTCTCATGATGTCCTGAAACCCAGGATGAAATAATACAGGTGCTGAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 90 bp ACTTCTAGGGCTAAAATACTAGTGGACTGTTCATATGATGGTTTCTaGATGACATGTGACAGCTTTTCAGCACCTGTATTATTTCATCCT +
Preference number: 1 (lower is better)
Translates to: TSRAKILVDCSYDGF*MTCDSFSAPVLFHP
Trigger: AGGATGAAATAATACAGGTGCTGAAAAGCTGTCACATGTCATTCAGAAACCATCATATGAACAGTCCACTAGTATTTTAGCCCTAGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR TCA 90 bp GAGCACCAGGTTGGGGGTAAGGTCATAGATCAACAGGATCCCAAGGCAGAAGAAATGGCCCGTTCTCAATaGGCTGCTGGGCACACCTCC +
Preference number: 2 (lower is better)
Translates to: EHQVGGKVIDQQDPKAEEMARSQ*AAGHTS
Trigger: GGAGGTGTGCCCAGCAGCTCATTGAGAACGGGCCAT...TTCTTCTGCCTTGGGATCCTGTTGATCTATGACCTTACCCCCAACCTGGTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR TCA 90 bp AACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTTCCAGACCAGGGTGTaGAAGCGGTGGCTGTCAAGA +
Preference number: 2 (lower is better)
Translates to: NLTMSQSPSLSVLHSSCWFQTRV*KRWLSR
Trigger: TCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAA...CCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
3UTR-3UTR CCA 90 bp GTTTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTGGCCTAGCTGTCTACGCCAAGGCAGGTGGCTaGGAGGTGGAGGTTGTAGTG +
Preference number: 2 (lower is better)
Translates to: VSFCKETLRGKSTGLAVYAKAGG*EVEVVV
Trigger: CACTACAACCTCCACCTCCCAGCCACCTGCCTTGGC...GTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR CCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATAGGAGGCCAAGGCAGGTaGCTGGGAGGTGGAGGTTGT +
Preference number: 2 (lower is better)
Translates to: TTADILLLPVARTEANTIGGQGR*LGGGGC
Trigger: ACAACCTCCACCTCCCAGCCACCTGCCTTGGCCTCC...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR CCA 90 bp GTTTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTGGCCTAGCTGTCTACAGATGGGATGGCGGCTaGGAAGAGGCGCTCCTCACT +
Preference number: 2 (lower is better)
Translates to: VSFCKETLRGKSTGLAVYRWDGG*EEALLT
Trigger: AGTGAGGAGCGCCTCTTCCCAGCCGCCATCCCATCT...GTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR TCA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCTTCCAGACCAGGGTGTaGAAGCGGTGGCTGTCAAGA +
Preference number: 2 (lower is better)
Translates to: TESITVSLAFILLVRLIIFQTRV*KRWLSR
Trigger: TCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAA...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
3UTR-3UTR CCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGAGCACAGAGAAACTGTaGCTTCAGCTCAACCTGACC +
Preference number: 2 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMSTEKL*LQLNLT
Trigger: GGTCAGGTTGAGCTGAAGCCACAGTTTCTCTGTGCT...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR TCA 90 bp ATTCATATTATGCAATTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGGATCTGAGCTGTAGATaGGAAGGTGGTGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: IHIMQLLMGSTATDDGNLDLSCR*EGGGPS
Trigger: GCTGGGACCACCACCTTCTCATCTACAGCTCAGATC...CAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAATTGCATAATATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427274.6
3UTR-3UTR CCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGCCCAGCTGTAAGACCTaGCTTGTCATTAGGCTTCAA +
Preference number: 2 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMPSCKT*LVIRLQ
Trigger: TTGAAGCCTAATGACAAGCCAGGTCTTACAGCTGGG...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR GCA 90 bp GTTTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTGGCCTAGCTGTCTACCATCACTGTCAGTCTTaGATTCATCCTGCTGGTCAG +
Preference number: 2 (lower is better)
Translates to: VSFCKETLRGKSTGLAVYHHCQS*IHPAGQ
Trigger: CTGACCAGCAGGATGAATGCAAGACTGACAGTGATG...GTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CAA 90 bp CAGAACTCAGGATTCCTGGTACATCAGGCAGTAGTCCTTAAACTTTaGCCCATACGTTGTGGAGCATTTACAAAAGCAATTCTCTGGACA +
Preference number: 2 (lower is better)
Translates to: QNSGFLVHQAVVLKL*PIRCGAFTKAILWT
Trigger: TGTCCAGAGAATTGCTTTTGTAAATGCTCCACAACGTATGGGCAAAAGTTTAAGGACTACTGCCTGATGTACCAGGAATCCTGAGTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR TCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGAGAAAACTCTGTTTTTaGTTGGTTTACCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMRKLCF*LVYLPP
Trigger: AGGAGGCAGGTAAACCAATCAAAAACAGAGTTTTCT...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR CCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATATTGGATGTAGAAACCTaGTTTTCTGAAGAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: TTADILLLPVARTEANTILDVET*FSEEPS
Trigger: GCTGGGCTCTTCAGAAAACCAGGTTTCTACATCCAA...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR TCA 90 bp AGTAGTAAGAAACTTCTGAGGTGCAGTCTTTTAGGAATGGTACTAAAGAGCATATTCTATCAGACGATCTaGGCTGTAGATGAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: SSKKLLRCSLLGMVLKSIFYQTI*AVDEKV
Trigger: CACCTTCTCATCTACAGCTCAGATCGTCTGATAGAA...TATGCTCTTTAGTACCATTCCTAAAAGACTGCACCTCAGAAGTTTCTTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427274.6
3UTR-3UTR TCA 90 bp ATTCATATTATGCAATTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGGTGTTCATTTTGCTGTaGATTGACTTCAACATTCCT +
Preference number: 2 (lower is better)
Translates to: IHIMQLLMGSTATDDGNLVFILL*IDFNIP
Trigger: AGGAATGTTGAAGTCAATTCACAGCAAAATGAACAC...CAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAATTGCATAATATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427274.6
3UTR-3UTR TCA 90 bp AGTAGTAAGAAACTTCTGAGGTGCAGTCTTTTAGGAATGGTACTAAAGAGCATAATATTATGCAATTACTaGTGGGCTCTACTGCTACTG +
Preference number: 2 (lower is better)
Translates to: SSKKLLRCSLLGMVLKSIILCNY*WALLLL
Trigger: CAGTAGCAGTAGAGCCCATCAGTAATTGCATAATAT...TATGCTCTTTAGTACCATTCCTAAAAGACTGCACCTCAGAAGTTTCTTACTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427274.6
3UTR-3UTR GCA 90 bp ATTCATATTATGCAATTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGCCAAAGTGTTCATTTTaGTGTGAATTGACTTCAACA +
Preference number: 2 (lower is better)
Translates to: IHIMQLLMGSTATDDGNLPKCSF*CELTST
Trigger: TGTTGAAGTCAATTCACAGCAAAATGAACACTTTGG...CAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAATTGCATAATATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427274.6
3UTR CAA 90 bp CACAATTATGGTAGCCATCCTTATCACCATTTTATAGAAGAGGAATaGATCACTGGCTGGATTAATTGCAAAGCTCTAAAATTAGACAGT +
Preference number: 2 (lower is better)
Translates to: HNYGSHPYHHFIEEE*ITGWINCKALKLDS
Trigger: ACTGTCTAATTTTAGAGCTTTGCAATTAATCCAGCCAGTGATCAATTCCTCTTCTATAAAATGGTGATAAGGATGGCTACCATAATTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR CCA 90 bp AGTAGTAAGAAACTTCTGAGGTGCAGTCTTTTAGGAATGGTACTAAAGAGCATAATTCAAAAAGGATACTaGCCAAAGTGTTCATTTTGC +
Preference number: 2 (lower is better)
Translates to: SSKKLLRCSLLGMVLKSIIQKGY*PKCSFC
Trigger: GCAAAATGAACACTTTGGCCAGTATCCTTTTTGAAT...TATGCTCTTTAGTACCATTCCTAAAAGACTGCACCTCAGAAGTTTCTTACTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427274.6
3UTR CCA 72 bp AATCCCGGCACCTCGGGAGGCCGAGGCAGTCAGGCGTaGCGGCGCTCGCCTGCAATTGCAGGCACTCGGCAG +
Preference number: 3 (lower is better)
Translates to: NPGTSGGRGSQA*RRSPAIAGTRQ
Trigger: CTGCCGAGTGCCTGCAATTGCAGGCGAGCGCCGCCACGCCTGACTGCCTCGGCCTCCCGAGGTGCCGGGATT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR GCA 72 bp GGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTaGCGGGCGGAGGGGCTCCTCACTTCTCAGACAGGG +
Preference number: 3 (lower is better)
Translates to: GRRRSSLPRWGG*RAEGLLTSQTG
Trigger: CCCTGTCTGAGAAGTGAGGAGCCCCTCCGCCCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 72 bp GCGGCGCTCGCCTGCAATTGCAGGCACTCGGCAGGCTaGGGCAGGAGAATCAGGCAGGGAGGTTGCAGTGAG +
Preference number: 3 (lower is better)
Translates to: AALACNCRHSAG*GRRIRQGGCSE
Trigger: CTCACTGCAACCTCCCTGCCTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCAATTGCAGGCGAGCGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 72 bp CCCGTTCTCAATGAGCTGCTGGGCACACCTCCCAGATaGGGTGGTGGCCAGGCAGAGGGGCTCCTCACTTCC +
Preference number: 3 (lower is better)
Translates to: PVLNELLGTPPR*GGGQAEGLLTS
Trigger: GGAAGTGAGGAGCCCCTCTGCCTGGCCACCACCCCATCTGGGAGGTGTGCCCAGCAGCTCATTGAGAACGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 72 bp CGCCATTGTCATCATGGCCCGTTCTCAATGAGCTGCTaGGCACACCTCCCAGATGGGGTGGTGGCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: RHCHHGPFSMSC*AHLPDGVVARQ
Trigger: CTGCCTGGCCACCACCCCATCTGGGAGGTGTGCCCAGCAGCTCATTGAGAACGGGCCATGATGACAATGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR CAA 90 bp CGGACGGGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCCAGAAAACTCTGTTTTaGATTGGTTTACCTGCCTCC +
Preference number: 3 (lower is better)
Translates to: RTGQLPGRRRSSLPRWGGQKTLF*IGLPAS
Trigger: GGAGGCAGGTAAACCAATCAAAAACAGAGTTTTCTG...GCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCCCGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 72 bp CACAAAACCGCCATTGTCATCATGGCCCGTTCTCAATaGGCTGCTGGGCACACCTCCCAGATGGGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: HKTAIVIMARSQ*AAGHTSQMGWW
Trigger: CCACCACCCCATCTGGGAGGTGTGCCCAGCAGCTCATTGAGAACGGGCCATGATGACAATGGCGGTTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR CAA 90 bp GTTTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTGGCCTAGCTGTCTACGGCGCTCGCCTGCAATaGCAGGCACTCGGCAGGCTG +
Preference number: 3 (lower is better)
Translates to: VSFCKETLRGKSTGLAVYGARLQ*QALGRL
Trigger: CAGCCTGCCGAGTGCCTGCAATTGCAGGCGAGCGCC...GTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 72 bp GCCCATCAGCCATCAACAGGGTTTGCTTGGCTGCAGTaGGCTAGACTAGCTTGTGTCCCAGTTCACTCTCAC +
Preference number: 3 (lower is better)
Translates to: AHQPSTGFAWLQ*ARLACVPVHSH
Trigger: GTGAGAGTGAACTGGGACACAAGCTAGTCTAGCTCACTGCAGCCAAGCAAACCCTGTTGATGGCTGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 72 bp ACATCTTGCACCACCCTTAATCCATTTAACCCTGAGTaGACACAGCACATGTTTCAGAGAGCACCAGGTTGG +
Preference number: 3 (lower is better)
Translates to: TSCTTLNPFNPE*TQHMFQRAPGW
Trigger: CCAACCTGGTGCTCTCTGAAACATGTGCTGTGTCCACTCAGGGTTAAATGGATTAAGGGTGGTGCAAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 72 bp TTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTaGCCTAGCTGTCTACATGTGGCCCTGGGTCACCTT +
Preference number: 3 (lower is better)
Translates to: FFLQRNPKRKKH*PSCLHVALGHL
Trigger: AAGGTGACCCAGGGCCACATGTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 72 bp ATGAGGAGGAGCAGTGGGGGCACTGACAGACACTGGTaGTTCGTTTCTTTTATCATAGTGGAACTGAGATTT +
Preference number: 3 (lower is better)
Translates to: MRRSSGGTDRHW*FVSFIIVELRF
Trigger: AAATCTCAGTTCCACTATGATAAAAGAAACGAATCACCAGTGTCTGTCAGTGCCCCCACTGCTCCTCCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 72 bp AAACCAGGTGTTAGTCCACCCATGAGCAAGTTCGCCTaGATAACAGCATCTATACACCATGATGTAGCTGAG +
Preference number: 3 (lower is better)
Translates to: KPGVSPPMSKFA*ITASIHHDVAE
Trigger: CTCAGCTACATCATGGTGTATAGATGCTGTTATTCAGGCGAACTTGCTCATGGGTGGACTAACACCTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 72 bp GAAACCTGGTTTTCTGAAGAGCCCAGCTGTAAGACCTaGCTTGTCATTAGGCTTCAACACTATCATGGAAAC +
Preference number: 3 (lower is better)
Translates to: ETWFSEEPSCKT*LVIRLQHYHGN
Trigger: GTTTCCATGATAGTGTTGAAGCCTAATGACAAGCCAGGTCTTACAGCTGGGCTCTTCAGAAAACCAGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR CAA 90 bp CTGACACCAACATCCATACCAAGCCTTTTAACTTCCTTGGAAGAACTGGTTTATCCATCACTGTCAGTCTaGCATTCATCCTGCTGGTCA +
Preference number: 3 (lower is better)
Translates to: LTPTSIPSLLTSLEELVYPSLSV*HSSCWS
Trigger: TGACCAGCAGGATGAATGCAAGACTGACAGTGATGG...ATAAACCAGTTCTTCCAAGGAAGTTAAAAGGCTTGGTATGGATGTTGGTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR-3UTR CAA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATAGCTGTAAGACCTGGCTaGTCATTAGGCTTCAACACT +
Preference number: 3 (lower is better)
Translates to: TTADILLLPVARTEANTIAVRPG*SLGFNT
Trigger: AGTGTTGAAGCCTAATGACAAGCCAGGTCTTACAGC...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 72 bp CCCATACGTTGTGGAGCATTTACAAAAGCAATTCTCTaGACAGTGAGCCCTCAATGCCTTTTTATATGTGGC +
Preference number: 3 (lower is better)
Translates to: PIRCGAFTKAIL*TVSPQCLFICG
Trigger: GCCACATATAAAAAGGCATTGAGGGCTCACTGTCCAGAGAATTGCTTTTGTAAATGCTCCACAACGTATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR TCA 72 bp GTAGGAATGCACAGTATATTCATATTATGCAATTACTaGTGGGCTCTACTGCTACTGATGATGGCAACCTGC +
Preference number: 3 (lower is better)
Translates to: VGMHSIFILCNY*WALLLLMMATC
Trigger: GCAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAATTGCATAATATGAATATACTGTGCATTCCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427274.6
3UTR-3UTR CAA 90 bp ATTCATATTATGCAATTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGTCATTTTGCTGTGAATaGACTTCAACATTCCTCTCT +
Preference number: 3 (lower is better)
Translates to: IHIMQLLMGSTATDDGNLSFCCE*TSTFLS
Trigger: AGAGAGGAATGTTGAAGTCAATTCACAGCAAAATGA...CAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAATTGCATAATATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427274.6
3UTR TCA 72 bp GCCAATTCTACAATTGTAGATTCCCATTATGCCTCCTaGAGTTTCATGTTAAGAGATTCCCCTTCACTTCTA +
Preference number: 3 (lower is better)
Translates to: ANSTIVDSHYAS*SFMLRDSPSLL
Trigger: TAGAAGTGAAGGGGAATCTCTTAACATGAAACTTCAGGAGGCATAATGGGAATCTACAATTGTAGAATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CCA 72 bp TATCACCATTTTATAGAAGAGGAATTGATCACTGGCTaGATTAATTGCAAAGCTCTAAAATTAGACAGTGGG +
Preference number: 3 (lower is better)
Translates to: YHHFIEEELITG*INCKALKLDSG
Trigger: CCCACTGTCTAATTTTAGAGCTTTGCAATTAATCCAGCCAGTGATCAATTCCTCTTCTATAAAATGGTGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CGGACGGGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTCCCAGATGGGGTGGTaGCCAGGCAGAGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTGQLPGRRRSSLPRWGGSQMGW*PGRGAP
Trigger: AGGAGCCCCTCTGCCTGGCCACCACCCCATCTGGGA...GCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCCCGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CAA 72 bp GCCGAGGCAGTCAGGCGTGGCGGCGCTCGCCTGCAATaGCAGGCACTCGGCAGGCTGAGGCAGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: AEAVRRGGARLQ*QALGRLRQENQ
Trigger: CTGATTCTCCTGCCTCAGCCTGCCGAGTGCCTGCAATTGCAGGCGAGCGCCGCCACGCCTGACTGCCTCGGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CGGACGGGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCGCCGCTTCCTCAGGTTaGTCCTCTGGATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RTGQLPGRRRSSLPRWGGAASSG*SSGSGC
Trigger: ACAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGC...GCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCCCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGGTGTCAATGCTGGTATaGGGAGGAGCAGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GQLPGRRRSSLPRWGGCRVSMLV*GGAVGA
Trigger: TGCCCCCACTGCTCCTCCTCATACCAGCATTGACAC...CCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp GGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGCCGTTCTCAATGAGCTaGTGGGCACACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GQLPGRRRSSLPRWGGCRPFSMS*WAHLPD
Trigger: ATCTGGGAGGTGTGCCCAGCAGCTCATTGAGAACGG...CCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CGGACGGGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTTTGCTTGGCTGCAGTaGGCTAGACTAGCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: RTGQLPGRRRSSLPRWGGFAWLQ*ARLACV
Trigger: GACACAAGCTAGTCTAGCTCACTGCAGCCAAGCAAA...GCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCCCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp GGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGTCTGAATCTGGTAACTaGTCCGTAAGGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: GQLPGRRRSSLPRWGGCRSESGN*SVRRTA
Trigger: TGCTGTCCTCCTTACGGACCAGTTACCAGATTCAGA...CCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CGGACGGGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCACAAAAGCAATTCTCTaGACAGTGAGCCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: RTGQLPGRRRSSLPRWGGTKAIL*TVSPQC
Trigger: GCATTGAGGGCTCACTGTCCAGAGAATTGCTTTTGT...GCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCCCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGATGAGCAAGTTCGCCTaGATAACAGCATCTATACAC +
Preference number: 4 (lower is better)
Translates to: GQLPGRRRSSLPRWGGCRMSKFA*ITASIH
Trigger: GTGTATAGATGCTGTTATTCAGGCGAACTTGCTCAT...CCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp AACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGACTTCCCAGATGGGGTaGCTGCCGGGCGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: NLTMSQSPSLSVLHSSCWTSQMG*LPGGGA
Trigger: AGCCCCTCCGCCCGGCAGCCACCCCATCTGGGAAGT...CCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CGGACGGGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTTTGCCCATACGTTGTaGAGCATTTACAAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RTGQLPGRRRSSLPRWGGFAHTL*SIYKSN
Trigger: ATTGCTTTTGTAAATGCTCCACAACGTATGGGCAAA...GCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCCCGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGACTTCCCAGATGGGGTaGCTGCCGGGCGGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVTSQMG*LPGGGA
Trigger: AGCCCCTCCGCCCGGCAGCCACCCCATCTGGGAAGT...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGAGGACCTCCTGGGCTCATaGTCCTCCTACCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PPMFPYSRPGCESGGCQEDLLGS*SSYLSL
Trigger: AAGGCTGAGGTAGGAGGATCATGAGCCCAGGAGGTC...CTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp TGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATACCTCCCAGATGGGGTaGTGGCCAGGCAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CHRVHHCQSCIHPAGQANTSQMG*WPGRGA
Trigger: AGCCCCTCTGCCTGGCCACCACCCCATCTGGGAGGT...ATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTTTCCAGACCAGGGTGTaGAAGCGGTGGCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: LLPPMFPYSRPGCESGGCFQTRV*KRWLSR
Trigger: TCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAA...ACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp CAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCGAGCCTGTTTCCTaGGATCCGGAGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: QPDHVTESITVSLAFILLVEPVS*DPEAFS
Trigger: CGAGAAGGCCTCCGGATCTCAGGAAACAGGCTCGAC...CAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414833.2
ENST00000467337.6
CDS-3UTR GCA 90 bp CAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGGGGAGCAGAGGCGATaGAGGCCGGAAAGTCACCAT +
Preference number: 4 (lower is better)
Translates to: QPDHVTESITVSLAFILLGEQRR*RPESHH
Trigger: ATGGTGACTTTCCGGCCTGCATCGCCTCTGCTCCCC...CAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225724.9
CDS-3UTR CCA 90 bp CCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGAGCTTCCCAGTAACTGCTaGTCCCTGCCGCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: PPMFPYSRPGCESGGCQELPSNC*SLPPSL
Trigger: CAAAGATGGCGGCAGGGACCAGCAGTTACTGGGAAG...CTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225724.9
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCTCCCAGATGGGGTGGTaGCCAGGCAGAGGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TESITVSLAFILLVRLIISQMGW*PGRGAP
Trigger: AGGAGCCCCTCTGCCTGGCCACCACCCCATCTGGGA...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGAGTTCTCAATGAGCTGCTaGGCACACCTCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: PPMFPYSRPGCESGGCQEFSMSC*AHLPDG
Trigger: CCCATCTGGGAGGTGTGCCCAGCAGCTCATTGAGAA...CTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAATTCTCAATGAGCTGCTaGGCACACCTCCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: LPPMFPYSRPGCESGGCQFSMSC*AHLPDG
Trigger: CCCATCTGGGAGGTGTGCCCAGCAGCTCATTGAGAA...TTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAACTGGTCTCAAACTCCTaGCCTCAAACGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LPPMFPYSRPGCESGGCQLVSNS*PQTIRL
Trigger: CAGGCGGATCGTTTGAGGCCAGGAGTTTGAGACCAG...TTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAACCGAGATCACGCCACTaGACTCCAGCCTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKPRSRH*TPAWAP
Trigger: TGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGG...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCGGCCGGGCAGAGGCTaGAATCTCGGCACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: HRVHHCQSCIHPAGQANYRPGRG*NLGTLG
Trigger: TCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCG...ATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGTACCTCCCAGATGGGGTaGTGGCCAGGCAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HHCQSCIHPAGQANYQDSTSQMG*WPGRGA
Trigger: AGCCCCTCTGCCTGGCCACCACCCCATCTGGGAGGT...ACTGTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CAA 72 bp CCACCTTTCCGCCTTTTCTATTCCACAAAACCGCCATaGTCATCATGGCCCGTTCTCAATGAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPFRLFYSTKPP*SSWPVLNELLG
Trigger: GCCCAGCAGCTCATTGAGAACGGGCCATGATGACAATGGCGGTTTTGTGGAATAGAAAAGGCGGAAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GAGCACCAGGTTGGGGGTAAGGTCATAGATCAACAGGATCCCAAGGCAGAAGAAGTCGAGCCTGTTTCCTaGGATCTTCCCAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: EHQVGGKVIDQQDPKAEEVEPVS*DLPSNC
Trigger: GCAGTTACTGGGAAGATCTCAGGAAACAGGCTCGAC...TTCTTCTGCCTTGGGATCCTGTTGATCTATGACCTTACCCCCAACCTGGTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGCTGTCAAGAGTCCCTaGAGATGTCCCATCAATGGA +
Preference number: 4 (lower is better)
Translates to: LPPMFPYSRPGCESGGCQAVKSP*RCPING
Trigger: TCCATTGATGGGACATCTTCAGGGACTCTTGACAGC...TTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp CAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGTTCCAGACCAGGGTGTaGAAGCGGTGGCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: QPDHVTESITVSLAFILLFQTRV*KRWLSR
Trigger: TCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAA...CAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAATGGCCCGTTCTCAATaGGCTGCTGGGCACACCTCC +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKMARSQ*AAGHTS
Trigger: GGAGGTGTGCCCAGCAGCTCATTGAGAACGGGCCAT...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACGTCGAGCCTGTTTCCTaGGATCCGGAGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDVEPVS*DPEAFS
Trigger: CGAGAAGGCCTCCGGATCTCAGGAAACAGGCTCGAC...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414833.2
ENST00000467337.6
CDS-3UTR GCA 90 bp CAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGATCTTCCCAGTAACTaGTGGTCCCTGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: QPDHVTESITVSLAFILLDLPSN*WSLPPS
Trigger: AGATGGCGGCAGGGACCAGCAGTTACTGGGAAGATC...CAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCCAAGGCAGGTGGCTaGGAGGTGGAGGTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKAKAGG*EVEVVV
Trigger: CACTACAACCTCCACCTCCCAGCCACCTGCCTTGGC...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGATGGGATGGCGGCTaGGAAGAGGCGCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDRWDGG*EEALLT
Trigger: AGTGAGGAGCGCCTCTTCCCAGCCGCCATCCCATCT...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGCACACCTCCCAGATaGGGTGGTGGCCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LIIKTVNFSLRCFLIPDQGTPPR*GGGQAE
Trigger: CTCTGCCTGGCCACCACCCCATCTGGGAGGTGTGCC...CTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp GTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGGCACACCTCCCAGATaGGGTGGTGGCCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VRLIIKTVNFSLRCFLIPGTPPR*GGGQAE
Trigger: CTCTGCCTGGCCACCACCCCATCTGGGAGGTGTGCC...TGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAACAGGCTGGAGTACAGTaGCACAATCGTTGCTTACTG +
Preference number: 4 (lower is better)
Translates to: LPPMFPYSRPGCESGGCQQAGVQ*HNRCLL
Trigger: CAGTAAGCAACGATTGTGCCACTGTACTCCAGCCTG...TTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGGGCACCATTGAGCACTaGGTGAACGAGACTCCGTCT +
Preference number: 4 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVGTIEH*VNETPS
Trigger: AGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCC...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAACAGCCTGGGCACCATTaGGCACTGAGTGAACGAGAC +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKQPGHH*ALSERD
Trigger: GTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTG...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGCAGCCTGGGCACCATTaGGCACTGAGTGAACGAGAC +
Preference number: 4 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMQPGHH*ALSERD
Trigger: GTCTCGTTCACTCAGTGCTCAATGGTGCCCAGGCTG...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACGTGTCAATGCTGGTATaGGGAGGAGCAGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDVSMLV*GGAVGA
Trigger: TGCCCCCACTGCTCCTCCTCATACCAGCATTGACAC...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGGACCTCCTGGGCTCATaGTCCTCCTACCTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMDLLGS*SSYLSL
Trigger: AAGGCTGAGGTAGGAGGATCATGAGCCCAGGAGGTC...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGAGTGCCGCTGTAATGTATaGATCAGGGCTGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: PPMFPYSRPGCESGGCQECRCNV*IRAAFK
Trigger: CTTGAATGCAGCCCTGATGCATACATTACAGCGGCA...CTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp CTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTACACCTCTCTTCCCTTaGTGGAGGTTTCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLPPMFPYSRPGCESGGCTPLFP*WRFLSA
Trigger: TGCAGAAAGAAACCTCCAGCAAGGGAAGAGAGGTGT...ACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCTCAGGTTGATCCTCTaGATCAGGCTGTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: LLPPMFPYSRPGCESGGCLRLIL*IRLFTA
Trigger: TGCTGTAAACAGCCTGATCCAGAGGATCAACCTGAG...ACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp CTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAACTCAGGTTGATCCTCTaGATCAGGCTGTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: LPPMFPYSRPGCESGGCQLRLIL*IRLFTA
Trigger: TGCTGTAAACAGCCTGATCCAGAGGATCAACCTGAG...TTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGGCTCAAATCCCTTCATaGGATCCCCACGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMAQIPS*DPHGAP
Trigger: AGGGGCTCCGTGGGGATCCCATGAAGGGATTTGAGC...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GTTTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTGGCCTAGCTGTCTACGCCGCTTCCTCAGGTTaGTCCTCTGGATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: VSFCKETLRGKSTGLAVYAASSG*SSGSGC
Trigger: ACAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGC...GTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCGCCGCTTCCTCAGGTTaGTCCTCTGGATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GQANYQDSQLLPPMFPYSAASSG*SSGSGC
Trigger: ACAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGC...GGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp CTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGCTGTCAAGAGTCCCTaGAGATGTCCCATCAATGGA +
Preference number: 4 (lower is better)
Translates to: LTMSQSPSLSVLHSSCWSAVKSP*RCPING
Trigger: TCCATTGATGGGACATCTTCAGGGACTCTTGACAGC...TGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp TTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTTCCAGACCAGGGTGTaGAAGCGGTGGCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: LSRQSTSPSDVSLFQTRVFQTRV*KRWLSR
Trigger: TCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAA...CACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp TGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATGGCTTCAGCTCAACCTaGCCATGTCACAGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: CHRVHHCQSCIHPAGQANGFSST*PCHRVH
Trigger: ATGGACTCTGTGACATGGTCAGGTTGAGCTGAAGCC...ATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACGGCACCATTGAGCACTaGGTGAACGAGACTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDGTIEH*VNETPS
Trigger: AGACGGAGTCTCGTTCACTCAGTGCTCAATGGTGCC...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATAATGGCCCGTTCTCAATaGGCTGCTGGGCACACCTCC +
Preference number: 4 (lower is better)
Translates to: TTADILLLPVARTEANTIMARSQ*AAGHTS
Trigger: GGAGGTGTGCCCAGCAGCTCATTGAGAACGGGCCAT...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCACAACCTCAAACATGCTaGAGCTGGTCCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: LTMSQSPSLSVLHSSCWSQPQTC*SWSISI
Trigger: GATGCTGATGGACCAGCTTCAGCATGTTTGAGGTTG...TGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCATTTGCTTGGCTGCAGTaGGCTAGACTAGCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LTMSQSPSLSVLHSSCWSFAWLQ*ARLACV
Trigger: GACACAAGCTAGTCTAGCTCACTGCAGCCAAGCAAA...TGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGGTAACTGCTGGTCCCTaGCGCCATCTTTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMVTAGP*RHLCRP
Trigger: TGGACGACAAAGATGGCGGCAGGGACCAGCAGTTAC...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp GAGCACCAGGTTGGGGGTAAGGTCATAGATCAACAGGATCCCAAGGCAGAAGAATGCCGCTGTAATGTATaGATCAGGGCTGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: EHQVGGKVIDQQDPKAEECRCNV*IRAAFK
Trigger: CTTGAATGCAGCCCTGATGCATACATTACAGCGGCA...TTCTTCTGCCTTGGGATCCTGTTGATCTATGACCTTACCCCCAACCTGGTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp ATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTATCAGGCAGGGAGGTTaGAGTGAGCCGAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: IIKTVNFSLRCFLIPDQGIRQGG*SEPRWQ
Trigger: CTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGAT...ACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CAGACAACCTCAAACATGCTGAAGCTGGTCCATCAGCATCTCAAAGAATCTATGATCAGGCAGGGAGGTTaGAGTGAGCCGAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: QTTSNMLKLVHQHLKESMIRQGG*SEPRWQ
Trigger: CTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGAT...CATAGATTCTTTGAGATGCTGATGGACCAGCTTCAGCATGTTTGAGGTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CATCAGGCAGTAGTCCTTAAACTTTTGCCCATACGTTGTGGAGCATTTACAAAACCGAGATCACGCCACTaGACTCCAGCCTGGGCACCA +
Preference number: 4 (lower is better)
Translates to: HQAVVLKLLPIRCGAFTKPRSRH*TPAWAP
Trigger: TGGTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGG...TTTTGTAAATGCTCCACAACGTATGGGCAAAAGTTTAAGGACTACTGCCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CATCAGGCAGTAGTCCTTAAACTTTTGCCCATACGTTGTGGAGCATTTACAAAACGGCCGGGCAGAGGCTaGAATCTCGGCACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: HQAVVLKLLPIRCGAFTKRPGRG*NLGTLG
Trigger: TCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCG...TTTTGTAAATGCTCCACAACGTATGGGCAAAAGTTTAAGGACTACTGCCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp AACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGAGCTACCAGTGTCAATaGTGGTATGAGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NLTMSQSPSLSVLHSSCWSYQCQ*WYEEEQ
Trigger: CTGCTCCTCCTCATACCAGCATTGACACTGGTAGCT...CCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGAGCTGATATCCTTTTATTaGCTGTGGCTCGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: PPMFPYSRPGCESGGCQELISFY*LWLGLK
Trigger: CTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAG...CTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp GGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCCACCTTCCCAGTAACTaGTGGTCCCTGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: GQANYQDSQLLPPMFPYSHLPSN*WSLPPS
Trigger: AGATGGCGGCAGGGACCAGCAGTTACTGGGAAGGTG...GGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467337.6
CDS-3UTR CCA 90 bp GCTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGAGCACAGAGAAACTGTaGCTTCAGCTCAACCTGACC +
Preference number: 4 (lower is better)
Translates to: AQPDHVTESITVSLAFILSTEKL*LQLNLT
Trigger: GGTCAGGTTGAGCTGAAGCCACAGTTTCTCTGTGCT...CAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225724.9
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp GTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGCCAAGGCAGGTGGCTaGGAGGTGGAGGTTGTAGTG +
Preference number: 4 (lower is better)
Translates to: VRLIIKTVNFSLRCFLIPAKAGG*EVEVVV
Trigger: CACTACAACCTCCACCTCCCAGCCACCTGCCTTGGC...TGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGAAGATGGGATGGCGGCTaGGAAGAGGCGCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: QANYQDSQLLPPMFPYSRRWDGG*EEALLT
Trigger: AGTGAGGAGCGCCTCTTCCCAGCCGCCATCCCATCT...TCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCACTAGCTGTCTACATGTaGCCCTGGGTCACCTTAGTA +
Preference number: 4 (lower is better)
Translates to: LTMSQSPSLSVLHSSCWSLAVYM*PWVTLV
Trigger: TACTAAGGTGACCCAGGGCCACATGTAGACAGCTAG...TGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAACTGGTCTCAAACTCCTaGCCTCAAACGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKLVSNS*PQTIRL
Trigger: CAGGCGGATCGTTTGAGGCCAGGAGTTTGAGACCAG...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGAGCCGCTTCCTCAGGTTaGTCCTCTGGATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QANYQDSQLLPPMFPYSRAASSG*SSGSGC
Trigger: ACAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGC...TCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp ATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTTTCCAGACCAGGGTGTaGAAGCGGTGGCTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: IIKTVNFSLRCFLIPDQGFQTRV*KRWLSR
Trigger: TCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAA...ACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATAGAGCAGTGGGGGCACTaGCAGACACTGGTGATTCGT +
Preference number: 4 (lower is better)
Translates to: TTADILLLPVARTEANTIEQWGH*QTLVIR
Trigger: ACGAATCACCAGTGTCTGTCAGTGCCCCCACTGCTC...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGAGCAGTGGGGGCACTaGCAGACACTGGTGATTCGT +
Preference number: 4 (lower is better)
Translates to: VRLIIKTVNFSLRCFLIPEQWGH*QTLVIR
Trigger: ACGAATCACCAGTGTCTGTCAGTGCCCCCACTGCTC...TGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCTGCTTACTGCAGCCTTaGCCTCCTGGGCTCATGATC +
Preference number: 4 (lower is better)
Translates to: GQANYQDSQLLPPMFPYSCLLQP*PPGLMI
Trigger: GATCATGAGCCCAGGAGGTCAAGGCTGCAGTAAGCA...GGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTTTCCATCTCGGGTACTaGTATGACTGTAACTTGTAC +
Preference number: 4 (lower is better)
Translates to: LLPPMFPYSRPGCESGGCFHLGY*YDCNLY
Trigger: GTACAAGTTACAGTCATAGCAGTACCCGAGATGGAA...ACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp CTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCACATCACTGTCAGTCTTaGATTCATCCTGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LTMSQSPSLSVLHSSCWSHHCQS*IHPAGQ
Trigger: CTGACCAGCAGGATGAATGCAAGACTGACAGTGATG...TGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp CATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAACAGATTCTGCCACATaGACCCTCAACAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: HVTESITVSLAFILLVRLTDSAT*TLNSET
Trigger: GGTTTCACTGTTGAGGGTGCATGTGGCAGAATCTGT...TAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp TGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATGAGAGAGACAGATTCTaGCACATGCACCCTCAACAG +
Preference number: 4 (lower is better)
Translates to: CHRVHHCQSCIHPAGQANERDRF*HMHPQQ
Trigger: CTGTTGAGGGTGCATGTGGCAGAATCTGTCTCTCTC...ATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp AACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGACACCTCTCTTCCCTTaGTGGAGGTTTCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NLTMSQSPSLSVLHSSCWTPLFP*WRFLSA
Trigger: TGCAGAAAGAAACCTCCAGCAAGGGAAGAGAGGTGT...CCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp GCTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGAGAGTCTTGCTACATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: AQPDHVTESITVSLAFILRVLLH*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAATGTAGCAAGACTCT...CAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp GCTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGACAGGTGTTAGCCACTaGACCCAGCCAATTCTACAA +
Preference number: 4 (lower is better)
Translates to: AQPDHVTESITVSLAFILTGVSH*TQPILQ
Trigger: TTGTAGAATTGGCTGGGTGCAGTGGCTAACACCTGT...CAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGACAATCGTTGCTTACTaGAGCCTTGACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMTIVAY*SLDLLG
Trigger: GCCCAGGAGGTCAAGGCTGCAGTAAGCAACGATTGT...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGTCTTCCCAGTAACTGCTaGTCCCTGCCGCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: HHCQSCIHPAGQANYQDSLPSNC*SLPPSL
Trigger: CAAAGATGGCGGCAGGGACCAGCAGTTACTGGGAAG...ACTGTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225724.9
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp AACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGCCCAGCTGTAAGACCTaGCTTGTCATTAGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: NLTMSQSPSLSVLHSSCWPSCKT*LVIRLQ
Trigger: TTGAAGCCTAATGACAAGCCAGGTCTTACAGCTGGG...CCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp GAGCACCAGGTTGGGGGTAAGGTCATAGATCAACAGGATCCCAAGGCAGAAGAAACAAAAGCAATTCTCTaGACAGTGAGCCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: EHQVGGKVIDQQDPKAEETKAIL*TVSPQC
Trigger: GCATTGAGGGCTCACTGTCCAGAGAATTGCTTTTGT...TTCTTCTGCCTTGGGATCCTGTTGATCTATGACCTTACCCCCAACCTGGTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTGGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTGCTCAAATCCCTTCATaGGATCCCCACGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LVRLIIKTVNFSLRCFLIAQIPS*DPHGAP
Trigger: AGGGGCTCCGTGGGGATCCCATGAAGGGATTTGAGC...AATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp TTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGGCTGTCAAGAGTCCCTaGAGATGTCCCATCAATGGA +
Preference number: 4 (lower is better)
Translates to: LSRQSTSPSDVSLFQTRVAVKSP*RCPING
Trigger: TCCATTGATGGGACATCTTCAGGGACTCTTGACAGC...CACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp GTTTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTGGCCTAGCTGTCTACGGCTTCAGCTCAACCTaGCCATGTCACAGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: VSFCKETLRGKSTGLAVYGFSST*PCHRVH
Trigger: ATGGACTCTGTGACATGGTCAGGTTGAGCTGAAGCC...GTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGGCTTCAGCTCAACCTaGCCATGTCACAGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: IIKTVNFSLRCFLIPDQGGFSST*PCHRVH
Trigger: ATGGACTCTGTGACATGGTCAGGTTGAGCTGAAGCC...ACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp GCTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCAATTCTCTGGACAGTaGGCCCTCAATGCCTTTTTA +
Preference number: 4 (lower is better)
Translates to: AQPDHVTESITVSLAFILQFSGQ*ALNAFL
Trigger: TAAAAAGGCATTGAGGGCTCACTGTCCAGAGAATTG...CAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GAGCACCAGGTTGGGGGTAAGGTCATAGATCAACAGGATCCCAAGGCAGAAGAAGCTGAGAACTACAGCTaGTATCCTTTTATTGCCTGT +
Preference number: 4 (lower is better)
Translates to: EHQVGGKVIDQQDPKAEEAENYS*YPFIAC
Trigger: ACAGGCAATAAAAGGATATCAGCTGTAGTTCTCAGC...TTCTTCTGCCTTGGGATCCTGTTGATCTATGACCTTACCCCCAACCTGGTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTTCCCATTATGCCTCCTaGAGTTTCATGTTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: LLPPMFPYSRPGCESGGCSHYAS*SFMLRD
Trigger: ATCTCTTAACATGAAACTTCAGGAGGCATAATGGGA...ACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATATGCTTACTGCAGCCTTaGCCTCCTGGGCTCATGATC +
Preference number: 4 (lower is better)
Translates to: TTADILLLPVARTEANTICLLQP*PPGLMI
Trigger: GATCATGAGCCCAGGAGGTCAAGGCTGCAGTAAGCA...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GAGCACCAGGTTGGGGGTAAGGTCATAGATCAACAGGATCCCAAGGCAGAAGAATTGCTGAGATGCTTATaGGCATTTCCTCACATAACC +
Preference number: 4 (lower is better)
Translates to: EHQVGGKVIDQQDPKAEELLRCL*AFPHIT
Trigger: GGTTATGTGAGGAAATGCTCATAAGCATCTCAGCAA...TTCTTCTGCCTTGGGATCCTGTTGATCTATGACCTTACCCCCAACCTGGTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGTAACTGCTGGTCCCTaGCGCCATCTTTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LIIKTVNFSLRCFLIPDQVTAGP*RHLCRP
Trigger: TGGACGACAAAGATGGCGGCAGGGACCAGCAGTTAC...CTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp TTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGCCCCCTATAAAAGCATGCCGCTGTAATGTATaGATCAGGGCTGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: LLMGSTATDDGNLPPIKACRCNV*IRAAFK
Trigger: CTTGAATGCAGCCCTGATGCATACATTACAGCGGCA...TGCTTTTATAGGGGGCAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR GCA 90 bp CAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCGTTCTCAATGAGCTaGTGGGCACACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: QANYQDSQLLPPMFPYSRPFSMS*WAHLPD
Trigger: ATCTGGGAGGTGTGCCCAGCAGCTCATTGAGAACGG...TCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATAGCTACCAGTGTCAATaGTGGTATGAGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HRVHHCQSCIHPAGQANYSYQCQ*WYEEEQ
Trigger: CTGCTCCTCCTCATACCAGCATTGACACTGGTAGCT...ATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp GTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCACTTCCCAGTAACTGCTaGTCCCTGCCGCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: VRLIIKTVNFSLRCFLIPLPSNC*SLPPSL
Trigger: CAAAGATGGCGGCAGGGACCAGCAGTTACTGGGAAG...TGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225724.9
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp CATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAAAGATGTCCCATCAATaGAACGCATACAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: HVTESITVSLAFILLVRLKMSHQ*NAYSSN
Trigger: GTTGCTGCTGTATGCGTTCCATTGATGGGACATCTT...TAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGCACAGAGAAACTGTaGCTTCAGCTCAACCTGACC +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDSTEKL*LQLNLT
Trigger: GGTCAGGTTGAGCTGAAGCCACAGTTTCTCTGTGCT...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225724.9
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp CCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGAGAAGAATTCTGGTGGCTaGCTTAAAATCTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: PPMFPYSRPGCESGGCQEKNSGG*LKICHC
Trigger: ACAGTGACAGATTTTAAGCCAGCCACCAGAATTCTT...CTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGCAGCAGTGTAGATGTTaGAAGTCTACAAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: QPDHVTESITVSLAFILLQQCRC*KSTNQA
Trigger: AGCCTGGTTTGTAGACTTCCAACATCTACACTGCTG...CAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGTCCTTTTATTGCCTGTaGCTCGGACTGAAGCCAATA +
Preference number: 4 (lower is better)
Translates to: QPDHVTESITVSLAFILLSFYCL*LGLKPI
Trigger: TATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGA...CAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp TTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGCTAGCTGTCTACATGTaGCCCTGGGTCACCTTAGTA +
Preference number: 4 (lower is better)
Translates to: LSRQSTSPSDVSLFQTRVLAVYM*PWVTLV
Trigger: TACTAAGGTGACCCAGGGCCACATGTAGACAGCTAG...CACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGTCGAGCCTGTTTCCTaGGATCTTCCCAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: VRLIIKTVNFSLRCFLIPVEPVS*DLPSNC
Trigger: GCAGTTACTGGGAAGATCTCAGGAAACAGGCTCGAC...TGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGCTGTCAAGAGTCCCTaGAGATGTCCCATCAATGGA +
Preference number: 4 (lower is better)
Translates to: IIKTVNFSLRCFLIPDQGAVKSP*RCPING
Trigger: TCCATTGATGGGACATCTTCAGGGACTCTTGACAGC...ACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp GTTTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTGGCCTAGCTGTCTACCAACCTCAAACATGCTaGAGCTGGTCCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: VSFCKETLRGKSTGLAVYQPQTC*SWSISI
Trigger: GATGCTGATGGACCAGCTTCAGCATGTTTGAGGTTG...GTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGATGCACCCTCAACAGTaGAACCATTCTCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVMHPQQ*NHSLDV
Trigger: AACATCCAGAGAATGGTTTCACTGTTGAGGGTGCAT...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAGCTGAGAACTACAGCTaGTATCCTTTTATTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HVTESITVSLAFILLVRLAENYS*YPFIAC
Trigger: ACAGGCAATAAAAGGATATCAGCTGTAGTTCTCAGC...TAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTATTGCTGAGATGCTTATaGGCATTTCCTCACATAACC +
Preference number: 4 (lower is better)
Translates to: HVTESITVSLAFILLVRLLLRCL*AFPHIT
Trigger: GGTTATGTGAGGAAATGCTCATAAGCATCTCAGCAA...TAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp AACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTTCCATCTCGGGTACTaGTATGACTGTAACTTGTAC +
Preference number: 4 (lower is better)
Translates to: NLTMSQSPSLSVLHSSCWFHLGY*YDCNLY
Trigger: GTACAAGTTACAGTCATAGCAGTACCCGAGATGGAA...CCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp CATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTATACCCCTGTAAGCCTTaGCAAAAGTTGTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: HVTESITVSLAFILLVRLYPCKP*QKLFNL
Trigger: GAGATTGAACAACTTTTGGCAAGGCTTACAGGGGTA...TAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAACATCACTGTCAGTCTTaGATTCATCCTGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKHHCQS*IHPAGQ
Trigger: CTGACCAGCAGGATGAATGCAAGACTGACAGTGATG...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp CACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCATCACTGTCAGTCTTaGATTCATCCTGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: HRVHHCQSCIHPAGQANYHHCQS*IHPAGQ
Trigger: CTGACCAGCAGGATGAATGCAAGACTGACAGTGATG...ATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp GCTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGTTTGATTGGTTTACCTaGCTCCTAGGGAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: AQPDHVTESITVSLAFILFDWFT*LLGRQK
Trigger: CTTTTGTCTCCCTAGGAGGCAGGTAAACCAATCAAA...CAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGTCACCTTAGTATAGGCTaGAGCACGGAGAGGTTAGTC +
Preference number: 4 (lower is better)
Translates to: HHCQSCIHPAGQANYQDSHLSIG*STERLV
Trigger: GACTAACCTCTCCGTGCTGCAGCCTATACTAAGGTG...ACTGTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CAGACAACCTCAAACATGCTGAAGCTGGTCCATCAGCATCTCAAAGAATCTATGCACCTTAGTATAGGCTaGAGCACGGAGAGGTTAGTC +
Preference number: 4 (lower is better)
Translates to: QTTSNMLKLVHQHLKESMHLSIG*STERLV
Trigger: GACTAACCTCTCCGTGCTGCAGCCTATACTAAGGTG...CATAGATTCTTTGAGATGCTGATGGACCAGCTTCAGCATGTTTGAGGTTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGAGTCTTGCTACATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDRVLLH*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAATGTAGCAAGACTCT...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCACAGGTGTTAGCCACTaGACCCAGCCAATTCTACAA +
Preference number: 4 (lower is better)
Translates to: TESITVSLAFILLVRLIITGVSH*TQPILQ
Trigger: TTGTAGAATTGGCTGGGTGCAGTGGCTAACACCTGT...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCCTCAGGTTGATCCTCTaGATCAGGCTGTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: TESITVSLAFILLVRLIILRLIL*IRLFTA
Trigger: TGCTGTAAACAGCCTGATCCAGAGGATCAACCTGAG...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCCCCAGCTGTAAGACCTaGCTTGTCATTAGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: TESITVSLAFILLVRLIIPSCKT*LVIRLQ
Trigger: TTGAAGCCTAATGACAAGCCAGGTCTTACAGCTGGG...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAGAGGAAAAAGCACTaGCCTAGCTGTCTACATGTG +
Preference number: 4 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVKRKKH*PSCLHV
Trigger: CACATGTAGACAGCTAGGCCAGTGCTTTTTCCTCTT...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp TTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGCCTCTCTTCCCTTGCTaGAGGTTTCTTTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSRQSTSPSDVSLFQTRVPLFPC*RFLSAK
Trigger: CTTTGCAGAAAGAAACCTCCAGCAAGGGAAGAGAGG...CACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGTCTGAATCTGGTAACTaGTCCGTAAGGAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMSESGN*SVRRTA
Trigger: TGCTGTCCTCCTTACGGACCAGTTACCAGATTCAGA...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CAA 72 bp CCTGGTTTTCTGAAGAGCCCAGCTGTAAGACCTGGCTaGTCATTAGGCTTCAACACTATCATGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: PGFLKSPAVRPG*SLGFNTIMETQ
Trigger: CTGTGTTTCCATGATAGTGTTGAAGCCTAATGACAAGCCAGGTCTTACAGCTGGGCTCTTCAGAAAACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATTCATATTATGCAATTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGGTCGAGCCTGTTTCCTaGGATCTTCCCAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: IHIMQLLMGSTATDDGNLVEPVS*DLPSNC
Trigger: GCAGTTACTGGGAAGATCTCAGGAAACAGGCTCGAC...CAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAATTGCATAATATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR TCA 90 bp CATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAAGAAAACTCTGTTTTTaGTTGGTTTACCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HVTESITVSLAFILLVRLRKLCF*LVYLPP
Trigger: AGGAGGCAGGTAAACCAATCAAAAACAGAGTTTTCT...TAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GAGCACCAGGTTGGGGGTAAGGTCATAGATCAACAGGATCCCAAGGCAGAAGAAACTGACAGACACTGGTaGTTCGTTTCTTTTATCATA +
Preference number: 4 (lower is better)
Translates to: EHQVGGKVIDQQDPKAEETDRHW*FVSFII
Trigger: TATGATAAAAGAAACGAATCACCAGTGTCTGTCAGT...TTCTTCTGCCTTGGGATCCTGTTGATCTATGACCTTACCCCCAACCTGGTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp TTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGCAATTCTCTGGACAGTaGGCCCTCAATGCCTTTTTA +
Preference number: 4 (lower is better)
Translates to: LSRQSTSPSDVSLFQTRVQFSGQ*ALNAFL
Trigger: TAAAAAGGCATTGAGGGCTCACTGTCCAGAGAATTG...CACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGCCTGTGGCTCGGACTaGAGCCAATACTATAAATAC +
Preference number: 4 (lower is better)
Translates to: IIKTVNFSLRCFLIPDQGACGSD*SQYYKY
Trigger: GTATTTATAGTATTGGCTTCAGTCCGAGCCACAGGC...ACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAACTTTGACACCAGAATaGAAAACTTCTCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LTMSQSPSLSVLHSSCWSTLTPE*KTSQSL
Trigger: CAGAGACTGAGAAGTTTTTCATTCTGGTGTCAAAGT...TGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp TGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTTAGTCAGACCTATCTaGCACCAACATCCATACCAA +
Preference number: 4 (lower is better)
Translates to: CHRVHHCQSCIHPAGQANLVRPI*HQHPYQ
Trigger: TTGGTATGGATGTTGGTGTCAGATAGGTCTGACTAA...ATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGTCTGACCTCCTGGCTGTaGCTAGCATTAACAAGTAAC +
Preference number: 4 (lower is better)
Translates to: HHCQSCIHPAGQANYQDSLTSWL*LALTSN
Trigger: GTTACTTGTTAATGCTAGTCACAGCCAGGAGGTCAG...ACTGTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGTTTCTGAATGACATGTaGCAGCTTTTCAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVFLNDM*QLFSTC
Trigger: ACAGGTGCTGAAAAGCTGTCACATGTCATTCAGAAA...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCTACCCCTGGCTTTGCTaGGATGCTTATGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: GQANYQDSQLLPPMFPYSYPWLC*DAYEHF
Trigger: GAAATGCTCATAAGCATCTCAGCAAAGCCAGGGGTA...GGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp TTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGCCCCCTATAAAAGCAGTTTATCTTCACCACTaGAAACCTTTTCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLMGSTATDDGNLPPIKAVYLHH*KPFRRW
Trigger: CCACCTTCGAAAAGGTTTTCAGTGGTGAAGATAAAC...TGCTTTTATAGGGGGCAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR GCA 90 bp TTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGCCCCCTATAAAAGCATTCCATCTCGGGTACTaGTATGACTGTAACTTGTAC +
Preference number: 4 (lower is better)
Translates to: LLMGSTATDDGNLPPIKAFHLGY*YDCNLY
Trigger: GTACAAGTTACAGTCATAGCAGTACCCGAGATGGAA...TGCTTTTATAGGGGGCAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR GCA 90 bp CTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGAGAGAGACAGATTCTaGCACATGCACCCTCAACAG +
Preference number: 4 (lower is better)
Translates to: LIIKTVNFSLRCFLIPDQERDRF*HMHPQQ
Trigger: CTGTTGAGGGTGCATGTGGCAGAATCTGTCTCTCTC...CTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAACTGATATCCTTTTATTaGCTGTGGCTCGGACTGAAG +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKLISFY*LWLGLK
Trigger: CTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAG...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp GGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGGTCTTTGCTGTGTTaGCCAGACTGGTCTCAAATC +
Preference number: 4 (lower is better)
Translates to: GQANYQDSQLLPPMFPYSRSLLC*PDWSQI
Trigger: GATTTGAGACCAGTCTGGGCAACACAGCAAAGACCT...GGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAAGATGTCCCATCAATaGAACGCATACAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDKMSHQ*NAYSSN
Trigger: GTTGCTGCTGTATGCGTTCCATTGATGGGACATCTT...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAAAGATGTCCCATCAATaGAACGCATACAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKKMSHQ*NAYSSN
Trigger: GTTGCTGCTGTATGCGTTCCATTGATGGGACATCTT...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp CACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATAAGATGTCCCATCAATaGAACGCATACAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: HRVHHCQSCIHPAGQANYKMSHQ*NAYSSN
Trigger: GTTGCTGCTGTATGCGTTCCATTGATGGGACATCTT...ATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAACTCTGTTTTTGATTaGTTTACCTGCCTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVNSVFD*FTCLLG
Trigger: CCCTAGGAGGCAGGTAAACCAATCAAAAACAGAGTT...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp TTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTTGGATGTAGAAACCTaGTTTTCTGAAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSRQSTSPSDVSLFQTRVLDVET*FSEEPS
Trigger: GCTGGGCTCTTCAGAAAACCAGGTTTCTACATCCAA...CACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGTTAATTGATCATTCTTaGGTGTTTCTCGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVLIDHS*VFLAEG
Trigger: CCCCTCTGCGAGAAACACCCAAGAATGATCAATTAA...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGAGGAAAAAGCACTaGCCTAGCTGTCTACATGTG +
Preference number: 4 (lower is better)
Translates to: TESITVSLAFILLVRLIIKRKKH*PSCLHV
Trigger: CACATGTAGACAGCTAGGCCAGTGCTTTTTCCTCTT...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGCAGGCTGGAGTACAGTaGCACAATCGTTGCTTACTG +
Preference number: 4 (lower is better)
Translates to: LIIKTVNFSLRCFLIPDQQAGVQ*HNRCLL
Trigger: CAGTAAGCAACGATTGTGCCACTGTACTCCAGCCTG...CTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAGTGTTCATTTTGCTGTaGATTGACTTCAACATTCCT +
Preference number: 4 (lower is better)
Translates to: HVTESITVSLAFILLVRLVFILL*IDFNIP
Trigger: AGGAATGTTGAAGTCAATTCACAGCAAAATGAACAC...TAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp CAGACAACCTCAAACATGCTGAAGCTGGTCCATCAGCATCTCAAAGAATCTATGATGCACCCTCAACAGTaGAACCATTCTCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: QTTSNMLKLVHQHLKESMMHPQQ*NHSLDV
Trigger: AACATCCAGAGAATGGTTTCACTGTTGAGGGTGCAT...CATAGATTCTTTGAGATGCTGATGGACCAGCTTCAGCATGTTTGAGGTTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATAAGTATGGTTGGAATTaGTTTCCCTCCTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: HRVHHCQSCIHPAGQANYKYGWN*FPSSLK
Trigger: CTTAAGGGAGGAGGGAAATCAATTCCAACCATACTT...ATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGATGATGGTTTCTGAATaGCATGTGACAGCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVMMVSE*HVTAFQ
Trigger: CTGAAAAGCTGTCACATGTCATTCAGAAACCATCAT...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGTCATATGATGGTTTCTaGATGACATGTGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: QPDHVTESITVSLAFILLSYDGF*MTCDSF
Trigger: AAAGCTGTCACATGTCATTCAGAAACCATCATATGA...CAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAAGGTGCACACCATCATaGATGGCTAATTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: HVTESITVSLAFILLVRLRCTPS*MANFSF
Trigger: AAAACTAAAATTAGCCATTCATGATGGTGTGCACCT...TAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCAGGTGCACACCATCATaGATGGCTAATTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: LNLTMSQSPSLSVLHSSCRCTPS*MANFSF
Trigger: AAAACTAAAATTAGCCATTCATGATGGTGTGCACCT...GCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGTACCCCTGGCTTTGCTaGGATGCTTATGAGCATTTC +
Preference number: 4 (lower is better)
Translates to: LIIKTVNFSLRCFLIPDQYPWLC*DAYEHF
Trigger: GAAATGCTCATAAGCATCTCAGCAAAGCCAGGGGTA...CTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp AGTAGTAAGAAACTTCTGAGGTGCAGTCTTTTAGGAATGGTACTAAAGAGCATAGATCTGAGCTGTAGATaGGAAGGTGGTGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSKKLLRCSLLGMVLKSIDLSCR*EGGGPS
Trigger: GCTGGGACCACCACCTTCTCATCTACAGCTCAGATC...TATGCTCTTTAGTACCATTCCTAAAAGACTGCACCTCAGAAGTTTCTTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR GCA 90 bp AGTAGTAAGAAACTTCTGAGGTGCAGTCTTTTAGGAATGGTACTAAAGAGCATAGTAACTGCTGGTCCCTaGCGCCATCTTTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SSKKLLRCSLLGMVLKSIVTAGP*RHLCRP
Trigger: TGGACGACAAAGATGGCGGCAGGGACCAGCAGTTAC...TATGCTCTTTAGTACCATTCCTAAAAGACTGCACCTCAGAAGTTTCTTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR GCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAATTCCATCTCGGGTACTaGTATGACTGTAACTTGTAC +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKFHLGY*YDCNLY
Trigger: GTACAAGTTACAGTCATAGCAGTACCCGAGATGGAA...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACTACCCCTGTAAGCCTTaGCAAAAGTTGTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDYPCKP*QKLFNL
Trigger: GAGATTGAACAACTTTTGGCAAGGCTTACAGGGGTA...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp CAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGATGCCGCTGTAATGTATaGATCAGGGCTGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: QANYQDSQLLPPMFPYSRCRCNV*IRAAFK
Trigger: CTTGAATGCAGCCCTGATGCATACATTACAGCGGCA...TCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp CTGGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTTGCCGCTGTAATGTATaGATCAGGGCTGCATTCAAG +
Preference number: 4 (lower is better)
Translates to: LVRLIIKTVNFSLRCFLICRCNV*IRAAFK
Trigger: CTTGAATGCAGCCCTGATGCATACATTACAGCGGCA...AATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCTTTGATTGGTTTACCTaGCTCCTAGGGAGACAAAAG +
Preference number: 4 (lower is better)
Translates to: TESITVSLAFILLVRLIIFDWFT*LLGRQK
Trigger: CTTTTGTCTCCCTAGGAGGCAGGTAAACCAATCAAA...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGAACAGATTCTGCCACATaGACCCTCAACAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: QANYQDSQLLPPMFPYSRTDSAT*TLNSET
Trigger: GGTTTCACTGTTGAGGGTGCATGTGGCAGAATCTGT...TCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp GCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAAGGTCTTTGCTGTGTTaGCCAGACTGGTCTCAAATC +
Preference number: 4 (lower is better)
Translates to: ANYQDSQLLPPMFPYSRPRSLLC*PDWSQI
Trigger: GATTTGAGACCAGTCTGGGCAACACAGCAAAGACCT...TGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp AGTAGTAAGAAACTTCTGAGGTGCAGTCTTTTAGGAATGGTACTAAAGAGCATACTTCCCAGTAACTGCTaGTCCCTGCCGCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: SSKKLLRCSLLGMVLKSILPSNC*SLPPSL
Trigger: CAAAGATGGCGGCAGGGACCAGCAGTTACTGGGAAG...TATGCTCTTTAGTACCATTCCTAAAAGACTGCACCTCAGAAGTTTCTTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR CCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATACTCAGGTTGATCCTCTaGATCAGGCTGTTTACAGCA +
Preference number: 4 (lower is better)
Translates to: TTADILLLPVARTEANTILRLIL*IRLFTA
Trigger: TGCTGTAAACAGCCTGATCCAGAGGATCAACCTGAG...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTGACACCAACATCCATACCAAGCCTTTTAACTTCCTTGGAAGAACTGGTTTATAGCACAGAGAAACTGTaGCTTCAGCTCAACCTGACC +
Preference number: 4 (lower is better)
Translates to: LTPTSIPSLLTSLEELVYSTEKL*LQLNLT
Trigger: GGTCAGGTTGAGCTGAAGCCACAGTTTCTCTGTGCT...ATAAACCAGTTCTTCCAAGGAAGTTAAAAGGCTTGGTATGGATGTTGGTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp TTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGAACTCTGTTTTTGATTaGTTTACCTGCCTCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LSRQSTSPSDVSLFQTRVNSVFD*FTCLLG
Trigger: CCCTAGGAGGCAGGTAAACCAATCAAAAACAGAGTT...CACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp GTTTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTGGCCTAGCTGTCTACTCCTTTTATTGCCTGTaGCTCGGACTGAAGCCAATA +
Preference number: 4 (lower is better)
Translates to: VSFCKETLRGKSTGLAVYSFYCL*LGLKPI
Trigger: TATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGA...GTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGTATTATTTCATCCTaGGTTTCAGGACATCATGAG +
Preference number: 4 (lower is better)
Translates to: LNLTMSQSPSLSVLHSSCCIISS*VSGHHE
Trigger: CTCATGATGTCCTGAAACCCAGGATGAAATAATACA...GCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCGAATTGATCACTGGCTaGATTAATTGCAAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: LNLTMSQSPSLSVLHSSCELITG*INCKAL
Trigger: TAGAGCTTTGCAATTAATCCAGCCAGTGATCAATTC...GCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp TTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGCCCCCTATAAAAGCAGTGTTCATTTTGCTGTaGATTGACTTCAACATTCCT +
Preference number: 4 (lower is better)
Translates to: LLMGSTATDDGNLPPIKAVFILL*IDFNIP
Trigger: AGGAATGTTGAAGTCAATTCACAGCAAAATGAACAC...TGCTTTTATAGGGGGCAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR TCA 90 bp CATCAGGCAGTAGTCCTTAAACTTTTGCCCATACGTTGTGGAGCATTTACAAAAGCCTGTGGCTCGGACTaGAGCCAATACTATAAATAC +
Preference number: 4 (lower is better)
Translates to: HQAVVLKLLPIRCGAFTKACGSD*SQYYKY
Trigger: GTATTTATAGTATTGGCTTCAGTCCGAGCCACAGGC...TTTTGTAAATGCTCCACAACGTATGGGCAAAAGTTTAAGGACTACTGCCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CATCAGGCAGTAGTCCTTAAACTTTTGCCCATACGTTGTGGAGCATTTACAAAACTGACCTCCTGGCTGTaGCTAGCATTAACAAGTAAC +
Preference number: 4 (lower is better)
Translates to: HQAVVLKLLPIRCGAFTKLTSWL*LALTSN
Trigger: GTTACTTGTTAATGCTAGTCACAGCCAGGAGGTCAG...TTTTGTAAATGCTCCACAACGTATGGGCAAAAGTTTAAGGACTACTGCCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGGTTTCAGGACATCATaGGAAACACTTATCAACACC +
Preference number: 4 (lower is better)
Translates to: IIKTVNFSLRCFLIPDQGGFRTS*ETLINT
Trigger: GGTGTTGATAAGTGTTTCTCATGATGTCCTGAAACC...ACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCTTTCTGAATGACATGTaGCAGCTTTTCAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: GQANYQDSQLLPPMFPYSFLNDM*QLFSTC
Trigger: ACAGGTGCTGAAAAGCTGTCACATGTCATTCAGAAA...GGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CAGACAACCTCAAACATGCTGAAGCTGGTCCATCAGCATCTCAAAGAATCTATGTTCCATCTCGGGTACTaGTATGACTGTAACTTGTAC +
Preference number: 4 (lower is better)
Translates to: QTTSNMLKLVHQHLKESMFHLGY*YDCNLY
Trigger: GTACAAGTTACAGTCATAGCAGTACCCGAGATGGAA...CATAGATTCTTTGAGATGCTGATGGACCAGCTTCAGCATGTTTGAGGTTGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp GCTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCCAAAGTGTTCATTTTaGTGTGAATTGACTTCAACA +
Preference number: 4 (lower is better)
Translates to: AQPDHVTESITVSLAFILPKCSF*CELTST
Trigger: TGTTGAAGTCAATTCACAGCAAAATGAACACTTTGG...CAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp CAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGATCAGCTTTAATGAATaGACAAAAGAATCAGACCAG +
Preference number: 4 (lower is better)
Translates to: QPDHVTESITVSLAFILLISFNE*TKESDQ
Trigger: CTGGTCTGATTCTTTTGTGCATTCATTAAAGCTGAT...CAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp TTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGCCCCCTATAAAAGCAAAGAAACTTCTGAGGTaGAGTCTTTTAGGAATGGTA +
Preference number: 4 (lower is better)
Translates to: LLMGSTATDDGNLPPIKAKKLLR*SLLGMV
Trigger: TACCATTCCTAAAAGACTGCACCTCAGAAGTTTCTT...TGCTTTTATAGGGGGCAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR CCA 90 bp CAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGATTGGATGTAGAAACCTaGTTTTCTGAAGAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QANYQDSQLLPPMFPYSRLDVET*FSEEPS
Trigger: GCTGGGCTCTTCAGAAAACCAGGTTTCTACATCCAA...TCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATACAGCAGTGTAGATGTTaGAAGTCTACAAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: TTADILLLPVARTEANTIQQCRC*KSTNQA
Trigger: AGCCTGGTTTGTAGACTTCCAACATCTACACTGCTG...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CATCAGGCAGTAGTCCTTAAACTTTTGCCCATACGTTGTGGAGCATTTACAAAACCTCTCTTCCCTTGCTaGAGGTTTCTTTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: HQAVVLKLLPIRCGAFTKPLFPC*RFLSAK
Trigger: CTTTGCAGAAAGAAACCTCCAGCAAGGGAAGAGAGG...TTTTGTAAATGCTCCACAACGTATGGGCAAAAGTTTAAGGACTACTGCCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp TTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGGTGTTCATTTTGCTGTaGATTGACTTCAACATTCCT +
Preference number: 4 (lower is better)
Translates to: LSRQSTSPSDVSLFQTRVVFILL*IDFNIP
Trigger: AGGAATGTTGAAGTCAATTCACAGCAAAATGAACAC...CACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAACTGACAGACACTGGTaGTTCGTTTCTTTTATCATA +
Preference number: 4 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKTDRHW*FVSFII
Trigger: TATGATAAAAGAAACGAATCACCAGTGTCTGTCAGT...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGAATGAGCAAGTTCGCCTaGATAACAGCATCTATACAC +
Preference number: 4 (lower is better)
Translates to: QANYQDSQLLPPMFPYSRMSKFA*ITASIH
Trigger: GTGTATAGATGCTGTTATTCAGGCGAACTTGCTCAT...TCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAAAGTATGGTTGGAATTaGTTTCCCTCCTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: ANYQDSQLLPPMFPYSRPKYGWN*FPSSLK
Trigger: CTTAAGGGAGGAGGGAAATCAATTCCAACCATACTT...TGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGTTTCAGGACATCATaGGAAACACTTATCAACACC +
Preference number: 4 (lower is better)
Translates to: ANYQDSQLLPPMFPYSRPGFRTS*ETLINT
Trigger: GGTGTTGATAAGTGTTTCTCATGATGTCCTGAAACC...TGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ATTCATATTATGCAATTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGTTCTATCAGACGATCTaGGCTGTAGATGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: IHIMQLLMGSTATDDGNLFYQTI*AVDEKV
Trigger: CACCTTCTCATCTACAGCTCAGATCGTCTGATAGAA...CAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAATTGCATAATATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR TCA 90 bp ATTCATATTATGCAATTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGCCAAGCATCTGCCACTaGCTTATCTCTAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: IHIMQLLMGSTATDDGNLPSICH*LISKWE
Trigger: TTCCCATTTAGAGATAAGTCAGTGGCAGATGCTTGG...CAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAATTGCATAATATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR GCA 90 bp CTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGTACCCCTGTAAGCCTTaGCAAAAGTTGTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: LIIKTVNFSLRCFLIPDQYPCKP*QKLFNL
Trigger: GAGATTGAACAACTTTTGGCAAGGCTTACAGGGGTA...CTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACCAGGGTGGGAATGGATaGAAATACCTTGATATTAAA +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDQGGNG*KYLDIK
Trigger: TTTAATATCAAGGTATTTGCATCCATTCCCACCCTG...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGCAGGGTGGGAATGGATaGAAATACCTTGATATTAAA +
Preference number: 4 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMQGGNG*KYLDIK
Trigger: TTTAATATCAAGGTATTTGCATCCATTCCCACCCTG...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTGGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCAGCAGGAAAACGATTaGCCAAAGTGTTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: LVRLIIKTVNFSLRCFLIQQEND*PKCSFC
Trigger: GCAAAATGAACACTTTGGCCAATCGTTTTCCTGCTG...AATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CCA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACATTCACAATCCAATCTaGCAGCTAAAAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDIHNPI*QLKEKQ
Trigger: CTGCTTTTCTTTTAGCTGCCAGATTGGATTGTGAAT...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp TTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGATTCACAATCCAATCTaGCAGCTAAAAGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSRQSTSPSDVSLFQTRVIHNPI*QLKEKQ
Trigger: CTGCTTTTCTTTTAGCTGCCAGATTGGATTGTGAAT...CACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGTAAGAATTCTGGTGGCTaGCTTAAAATCTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: HHCQSCIHPAGQANYQDSKNSGG*LKICHC
Trigger: ACAGTGACAGATTTTAAGCCAGCCACCAGAATTCTT...ACTGTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATGAATTGATCACTGGCTaGATTAATTGCAAAGCTCTA +
Preference number: 4 (lower is better)
Translates to: HRVHHCQSCIHPAGQANYELITG*INCKAL
Trigger: TAGAGCTTTGCAATTAATCCAGCCAGTGATCAATTC...ATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
3UTR CAA 72 bp GGATTCCTGGTACATCAGGCAGTAGTCCTTAAACTTTaGCCCATACGTTGTGGAGCATTTACAAAAGCAATT +
Preference number: 4 (lower is better)
Translates to: GFLVHQAVVLKL*PIRCGAFTKAI
Trigger: AATTGCTTTTGTAAATGCTCCACAACGTATGGGCAAAAGTTTAAGGACTACTGCCTGATGTACCAGGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GTTTCTTTCTGCAAAGAAACCCTAAGAGGAAAAAGCACTGGCCTAGCTGTCTACTTGTACATAGTTTGCTaGAGGAAACTAGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VSFCKETLRGKSTGLAVYLYIVC*RKLVSG
Trigger: ACCTGAAACTAGTTTCCTTCAGCAAACTATGTACAA...GTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGGTTTCTTTGCAGAAAGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCTTGTACATAGTTTGCTaGAGGAAACTAGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GQANYQDSQLLPPMFPYSLYIVC*RKLVSG
Trigger: ACCTGAAACTAGTTTCCTTCAGCAAACTATGTACAA...GGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATAAGAAAACTCTGTTTTTaGTTGGTTTACCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TTADILLLPVARTEANTIRKLCF*LVYLPP
Trigger: AGGAGGCAGGTAAACCAATCAAAAACAGAGTTTTCT...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTGGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTACTTTGACACCAGAATaGAAAACTTCTCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LVRLIIKTVNFSLRCFLITLTPE*KTSQSL
Trigger: CAGAGACTGAGAAGTTTTTCATTCTGGTGTCAAAGT...AATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTGACACCAACATCCATACCAAGCCTTTTAACTTCCTTGGAAGAACTGGTTTATTTAGTCAGACCTATCTaGCACCAACATCCATACCAA +
Preference number: 4 (lower is better)
Translates to: LTPTSIPSLLTSLEELVYLVRPI*HQHPYQ
Trigger: TTGGTATGGATGTTGGTGTCAGATAGGTCTGACTAA...ATAAACCAGTTCTTCCAAGGAAGTTAAAAGGCTTGGTATGGATGTTGGTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATATCCCATTATGCCTCCTaGAGTTTCATGTTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: TTADILLLPVARTEANTISHYAS*SFMLRD
Trigger: ATCTCTTAACATGAAACTTCAGGAGGCATAATGGGA...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CATCAGGCAGTAGTCCTTAAACTTTTGCCCATACGTTGTGGAGCATTTACAAAATACCCCTGTAAGCCTTaGCAAAAGTTGTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: HQAVVLKLLPIRCGAFTKYPCKP*QKLFNL
Trigger: GAGATTGAACAACTTTTGGCAAGGCTTACAGGGGTA...TTTTGTAAATGCTCCACAACGTATGGGCAAAAGTTTAAGGACTACTGCCTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTGACACCAACATCCATACCAAGCCTTTTAACTTCCTTGGAAGAACTGGTTTATTTAATTGATCATTCTTaGGTGTTTCTCGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LTPTSIPSLLTSLEELVYLIDHS*VFLAEG
Trigger: CCCCTCTGCGAGAAACACCCAAGAATGATCAATTAA...ATAAACCAGTTCTTCCAAGGAAGTTAAAAGGCTTGGTATGGATGTTGGTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp GTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGTGTTCATTTTGCTGTaGATTGACTTCAACATTCCT +
Preference number: 4 (lower is better)
Translates to: VRLIIKTVNFSLRCFLIPVFILL*IDFNIP
Trigger: AGGAATGTTGAAGTCAATTCACAGCAAAATGAACAC...TGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR TCA 90 bp ACTACAGCTGATATCCTTTTATTGCCTGTGGCTCGGACTGAAGCCAATACTATAGTGTTCATTTTGCTGTaGATTGACTTCAACATTCCT +
Preference number: 4 (lower is better)
Translates to: TTADILLLPVARTEANTIVFILL*IDFNIP
Trigger: AGGAATGTTGAAGTCAATTCACAGCAAAATGAACAC...TATAGTATTGGCTTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGCTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGTCCAAAGTGTTCATTTTaGTGTGAATTGACTTCAACA +
Preference number: 4 (lower is better)
Translates to: HHCQSCIHPAGQANYQDSPKCSF*CELTST
Trigger: TGTTGAAGTCAATTCACAGCAAAATGAACACTTTGG...ACTGTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR GCA 90 bp GGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCATCAGCTTTAATGAATaGACAAAAGAATCAGACCAG +
Preference number: 4 (lower is better)
Translates to: GQANYQDSQLLPPMFPYSISFNE*TKESDQ
Trigger: CTGGTCTGATTCTTTTGTGCATTCATTAAAGCTGAT...GGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTGGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTTGTATTATTTCATCCTaGGTTTCAGGACATCATGAG +
Preference number: 4 (lower is better)
Translates to: LVRLIIKTVNFSLRCFLICIISS*VSGHHE
Trigger: CTCATGATGTCCTGAAACCCAGGATGAAATAATACA...AATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR TCA 90 bp CTGACACCAACATCCATACCAAGCCTTTTAACTTCCTTGGAAGAACTGGTTTATTCATATGATGGTTTCTaGATGACATGTGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: LTPTSIPSLLTSLEELVYSYDGF*MTCDSF
Trigger: AAAGCTGTCACATGTCATTCAGAAACCATCATATGA...ATAAACCAGTTCTTCCAAGGAAGTTAAAAGGCTTGGTATGGATGTTGGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp AGTAGTAAGAAACTTCTGAGGTGCAGTCTTTTAGGAATGGTACTAAAGAGCATATACCCCTGTAAGCCTTaGCAAAAGTTGTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: SSKKLLRCSLLGMVLKSIYPCKP*QKLFNL
Trigger: GAGATTGAACAACTTTTGGCAAGGCTTACAGGGGTA...TATGCTCTTTAGTACCATTCCTAAAAGACTGCACCTCAGAAGTTTCTTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427274.6
CDS-3UTR GCA 90 bp GCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAACTGGCTGGATTAATTaGAAAGCTCTAAAATTAGAC +
Preference number: 4 (lower is better)
Translates to: ANYQDSQLLPPMFPYSRPTGWIN*KALKLD
Trigger: GTCTAATTTTAGAGCTTTGCAATTAATCCAGCCAGT...TGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp CTGACACCAACATCCATACCAAGCCTTTTAACTTCCTTGGAAGAACTGGTTTATTTTGCCCATACGTTGTaGAGCATTTACAAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LTPTSIPSLLTSLEELVYFAHTL*SIYKSN
Trigger: ATTGCTTTTGTAAATGCTCCACAACGTATGGGCAAA...ATAAACCAGTTCTTCCAAGGAAGTTAAAAGGCTTGGTATGGATGTTGGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CATCAGGCAGTAGTCCTTAAACTTTTGCCCATACGTTGTGGAGCATTTACAAAACCAAAGTGTTCATTTTaGTGTGAATTGACTTCAACA +
Preference number: 4 (lower is better)
Translates to: HQAVVLKLLPIRCGAFTKPKCSF*CELTST
Trigger: TGTTGAAGTCAATTCACAGCAAAATGAACACTTTGG...TTTTGTAAATGCTCCACAACGTATGGGCAAAAGTTTAAGGACTACTGCCTGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CTGACACCAACATCCATACCAAGCCTTTTAACTTCCTTGGAAGAACTGGTTTATCCAAAGTGTTCATTTTaGTGTGAATTGACTTCAACA +
Preference number: 4 (lower is better)
Translates to: LTPTSIPSLLTSLEELVYPKCSF*CELTST
Trigger: TGTTGAAGTCAATTCACAGCAAAATGAACACTTTGG...ATAAACCAGTTCTTCCAAGGAAGTTAAAAGGCTTGGTATGGATGTTGGTGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR GCA 90 bp CTGACACCAACATCCATACCAAGCCTTTTAACTTCCTTGGAAGAACTGGTTTATACTGGCTGGATTAATTaGAAAGCTCTAAAATTAGAC +
Preference number: 4 (lower is better)
Translates to: LTPTSIPSLLTSLEELVYTGWIN*KALKLD
Trigger: GTCTAATTTTAGAGCTTTGCAATTAATCCAGCCAGT...ATAAACCAGTTCTTCCAAGGAAGTTAAAAGGCTTGGTATGGATGTTGGTGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CCA 90 bp ATTCATATTATGCAATTACTGATGGGCTCTACTGCTACTGATGATGGCAACCTGATTCAAAAAGGATACTaGCCAAAGTGTTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: IHIMQLLMGSTATDDGNLIQKGY*PKCSFC
Trigger: GCAAAATGAACACTTTGGCCAGTATCCTTTTTGAAT...CAGGTTGCCATCATCAGTAGCAGTAGAGCCCATCAGTAATTGCATAATATGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427274.6
3UTR CAA 72 bp GGTAGCCATCCTTATCACCATTTTATAGAAGAGGAATaGATCACTGGCTGGATTAATTGCAAAGCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: GSHPYHHFIEEE*ITGWINCKALK
Trigger: TTTTAGAGCTTTGCAATTAATCCAGCCAGTGATCAATTCCTCTTCTATAAAATGGTGATAAGGATGGCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp GGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGCGCCGCTTCCTCAGGTaGATCCTCTGGATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GQLPGRRRSSLPRWGGCRRRFLR*ILWIRL
Trigger: CAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGCG...CCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp GGGCAGCTGCCCGGGCGTAGACGCTCCTCACTTCCCAGATGGGGTGGCTGCCGGCTGCACCCAGCCCTATaGTCATGGTTTTTCATATTT +
Preference number: 5 (lower is better)
Translates to: GQLPGRRRSSLPRWGGCRLHPAL*SWFFIF
Trigger: AAATATGAAAAACCATGACAATAGGGCTGGGTGCAG...CCGGCAGCCACCCCATCTGGGAAGTGAGGAGCGTCTACGCCCGGGCAGCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS CCA 90 bp CCCCCTAGGATGAGCGAGTCCCGCCGCTTCCTCAGGTTGATCCTCTaGATCAGGCTGTTTACAGCAGGAAAACGATTGGCCAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: PPRMSESRRFLRLIL*IRLFTAGKRLAKVF
Trigger: GAACACTTTGGCCAATCGTTTTCCTGCTGTAAACAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGCGGGACTCGCTCATCCTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
ENST00000477885.1
ENST00000494918.1
ENST00000581721.5
CDS-3UTR CAA 90 bp GCTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGTCCCTGCCGCCATCTTaGTCGTCCAACGTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: AQPDHVTESITVSLAFILSLPPS*SSNVSR
Trigger: CCGGCTGACGTTGGACGACAAAGATGGCGGCAGGGA...CAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCGGCGCTCGCCTGCAATaGCAGGCACTCGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TESITVSLAFILLVRLIIGARLQ*QALGRL
Trigger: CAGCCTGCCGAGTGCCTGCAATTGCAGGCGAGCGCC...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGTCCCTGCCGCCATCTTaGTCGTCCAACGTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVSLPPS*SSNVSR
Trigger: CCGGCTGACGTTGGACGACAAAGATGGCGGCAGGGA...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp CAGACAACCTCAAACATGCTGAAGCTGGTCCATCAGCATCTCAAAGAATCTATGGGCGCTCGCCTGCAATaGCAGGCACTCGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QTTSNMLKLVHQHLKESMGARLQ*QALGRL
Trigger: CAGCCTGCCGAGTGCCTGCAATTGCAGGCGAGCGCC...CATAGATTCTTTGAGATGCTGATGGACCAGCTTCAGCATGTTTGAGGTTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp TGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATCGCCGCTTCCTCAGGTaGATCCTCTGGATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CHRVHHCQSCIHPAGQANRRFLR*ILWIRL
Trigger: CAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGCG...ATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS TCA 90 bp CTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGAGTCCCTaGAGATGTCCCATCAATGGAACGCATACAGCAGCAACAGGATGG +
Preference number: 5 (lower is better)
Translates to: LIPDQGVKAVAVKSP*RCPINGTHTAATGW
Trigger: CCATCCTGTTGCTGCTGTATGCGTTCCATTGATGGGACATCTTCAGGGACTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
ENST00000477885.1
ENST00000494918.1
CDS-3UTR CAA 90 bp CCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGAGCCATCACTGTCAGTCTaGCATTCATCCTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: PPMFPYSRPGCESGGCQEPSLSV*HSSCWS
Trigger: TGACCAGCAGGATGAATGCAAGACTGACAGTGATGG...CTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS TCA 90 bp CAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTaGAAGCGGTGGCTGTCAAGAGTCCCTGAAGATGTCCCATCAATG +
Preference number: 5 (lower is better)
Translates to: QSTSPSDVSLFQTRV*KRWLSRVPEDVPSM
Trigger: CATTGATGGGACATCTTCAGGGACTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
ENST00000477885.1
ENST00000494918.1
CDS-3UTR CAA 90 bp CATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGTCGCCGCTTCCTCAGGTaGATCCTCTGGATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: HHCQSCIHPAGQANYQDSRRFLR*ILWIRL
Trigger: CAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGCG...ACTGTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp ATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTCGCCGCTTCCTCAGGTaGATCCTCTGGATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: IIKTVNFSLRCFLIPDQGRRFLR*ILWIRL
Trigger: CAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGCG...ACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp CAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGCACACCTCTCTTCCCTaGCTGGAGGTTTCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: QPDHVTESITVSLAFILLHTSLP*LEVSFC
Trigger: GCAGAAAGAAACCTCCAGCAAGGGAAGAGAGGTGTG...CAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp GCTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGACAGTGGCACAATCGTaGCTTACTGCAGCCTTGACC +
Preference number: 5 (lower is better)
Translates to: AQPDHVTESITVSLAFILTVAQS*LTAALT
Trigger: GGTCAAGGCTGCAGTAAGCAACGATTGTGCCACTGT...CAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp GAGCACCAGGTTGGGGGTAAGGTCATAGATCAACAGGATCCCAAGGCAGAAGAAGCTGTAAGACCTGGCTaGTCATTAGGCTTCAACACT +
Preference number: 5 (lower is better)
Translates to: EHQVGGKVIDQQDPKAEEAVRPG*SLGFNT
Trigger: AGTGTTGAAGCCTAATGACAAGCCAGGTCTTACAGC...TTCTTCTGCCTTGGGATCCTGTTGATCTATGACCTTACCCCCAACCTGGTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp TGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATCACACCTCTCTTCCCTaGCTGGAGGTTTCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: CHRVHHCQSCIHPAGQANHTSLP*LEVSFC
Trigger: GCAGAAAGAAACCTCCAGCAAGGGAAGAGAGGTGTG...ATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp GTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTTTGCTTACTGCAGCCTaGACCTCCTGGGCTCATGAT +
Preference number: 5 (lower is better)
Translates to: VTESITVSLAFILLVRLILLTAA*TSWAHD
Trigger: ATCATGAGCCCAGGAGGTCAAGGCTGCAGTAAGCAA...AATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAAGCCATCAACAGGGTTaGCTTGGCTGCAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKSHQQG*LGCSEL
Trigger: TAGCTCACTGCAGCCAAGCAAACCCTGTTGATGGCT...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAATTGCTTACTGCAGCCTaGACCTCCTGGGCTCATGAT +
Preference number: 5 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKLLTAA*TSWAHD
Trigger: ATCATGAGCCCAGGAGGTCAAGGCTGCAGTAAGCAA...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAACCATCACTGTCAGTCTaGCATTCATCCTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKPSLSV*HSSCWS
Trigger: TGACCAGCAGGATGAATGCAAGACTGACAGTGATGG...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp CCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGCGGTGGCTGTCAAGAGCAAGGGAGAAAAGTTTaGTTCTCCCAACAGAGAATT +
Preference number: 5 (lower is better)
Translates to: PPMFPYSRPGCESGGCQEQGRKV*FSQQRI
Trigger: AATTCTCTGTTGGGAGAACAAAACTTTTCTCCCTTG...CTCTTGACAGCCACCGCTTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp ATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTCCATCACTGTCAGTCTaGCATTCATCCTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: IIKTVNFSLRCFLIPDQGPSLSV*HSSCWS
Trigger: TGACCAGCAGGATGAATGCAAGACTGACAGTGATGG...ACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp GCTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCAGAAAACTCTGTTTTaGATTGGTTTACCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: AQPDHVTESITVSLAFILQKTLF*IGLPAS
Trigger: GGAGGCAGGTAAACCAATCAAAAACAGAGTTTTCTG...CAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCGCTGTAAGACCTGGCTaGTCATTAGGCTTCAACACT +
Preference number: 5 (lower is better)
Translates to: TESITVSLAFILLVRLIIAVRPG*SLGFNT
Trigger: AGTGTTGAAGCCTAATGACAAGCCAGGTCTTACAGC...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGGCTGATATCCTTTTATaGCCTGTGGCTCGGACTGAA +
Preference number: 5 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMADILL*PVARTE
Trigger: TTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGC...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp GTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAAGCCATCAACAGGGTTaGCTTGGCTGCAGTGAGCTA +
Preference number: 5 (lower is better)
Translates to: VRLIIKTVNFSLRCFLIPSHQQG*LGCSEL
Trigger: TAGCTCACTGCAGCCAAGCAAACCCTGTTGATGGCT...TGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp CAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGAACAGTGGCACAATCGTaGCTTACTGCAGCCTTGACC +
Preference number: 5 (lower is better)
Translates to: QANYQDSQLLPPMFPYSRTVAQS*LTAALT
Trigger: GGTCAAGGCTGCAGTAAGCAACGATTGTGCCACTGT...TCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAGTAGTCCTTAAACTTTaGCCCATACGTTGTGGAGCA +
Preference number: 5 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKVVLKL*PIRCGA
Trigger: TGCTCCACAACGTATGGGCAAAAGTTTAAGGACTAC...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp CTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCCAAGGGAGAAAAGTTTaGTTCTCCCAACAGAGAATT +
Preference number: 5 (lower is better)
Translates to: LNLTMSQSPSLSVLHSSCQGRKV*FSQQRI
Trigger: AATTCTCTGTTGGGAGAACAAAACTTTTCTCCCTTG...GCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp AAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGAAAACAGCAGGAAAACGATaGGCCAAAGTGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: KTVNFSLRCFLIPDQGVKTAGKR*AKVFIL
Trigger: CAAAATGAACACTTTGGCCAATCGTTTTCCTGCTGT...TTTCACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp ACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCACAGCAGGAAAACGATaGGCCAAAGTGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: TESITVSLAFILLVRLIITAGKR*AKVFIL
Trigger: CAAAATGAACACTTTGGCCAATCGTTTTCCTGCTGT...GATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGACTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp GTCCATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACCAGAAAACTCTGTTTTaGATTGGTTTACCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: VHHCQSCIHPAGQANYQDQKTLF*IGLPAS
Trigger: GGAGGCAGGTAAACCAATCAAAAACAGAGTTTTCTG...GTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp CTGGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTGCTGATATCCTTTTATaGCCTGTGGCTCGGACTGAA +
Preference number: 5 (lower is better)
Translates to: LVRLIIKTVNFSLRCFLIADILL*PVARTE
Trigger: TTCAGTCCGAGCCACAGGCAATAAAAGGATATCAGC...AATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp CTCAACCTGACCATGTCACAGAGTCCATCACTGTCAGTCTTGCATTCATCCTGCTATCCCCAAACTACCTaGATGGTTACTGTTTCAATA +
Preference number: 5 (lower is better)
Translates to: LNLTMSQSPSLSVLHSSCYPQTT*MVTVSI
Trigger: TATTGAAACAGTAACCATCAAGGTAGTTTGGGGATA...GCAGGATGAATGCAAGACTGACAGTGATGGACTCTGTGACATGGTCAGGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp ATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGGGTGTGTCATTTTGCTGTGAATaGACTTCAACATTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: IKTVNFSLRCFLIPDQGVSFCCE*TSTFLS
Trigger: AGAGAGGAATGTTGAAGTCAATTCACAGCAAAATGA...CACACCCTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp CATCACTGTCAGTCTTGCATTCATCCTGCTGGTCAGGCTAATTATCAAGACAGTACAGCAGGAAAACGATaGGCCAAAGTGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: HHCQSCIHPAGQANYQDSTAGKR*AKVFIL
Trigger: CAAAATGAACACTTTGGCCAATCGTTTTCCTGCTGT...ACTGTCTTGATAATTAGCCTGACCAGCAGGATGAATGCAAGACTGACAGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp CAGACAACCTCAAACATGCTGAAGCTGGTCCATCAGCATCTCAAAGAATCTATGACTTTTGCCCATACGTaGTGGAGCATTTACAAAAGC +
Preference number: 5 (lower is better)
Translates to: QTTSNMLKLVHQHLKESMTFAHT*WSIYKS
Trigger: GCTTTTGTAAATGCTCCACAACGTATGGGCAAAAGT...CATAGATTCTTTGAGATGCTGATGGACCAGCTTCAGCATGTTTGAGGTTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp CTGGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTACAGCAGGAAAACGATaGGCCAAAGTGTTCATTTTG +
Preference number: 5 (lower is better)
Translates to: LVRLIIKTVNFSLRCFLITAGKR*AKVFIL
Trigger: CAAAATGAACACTTTGGCCAATCGTTTTCCTGCTGT...AATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp CTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCAGACTTTTGCCCATACGTaGTGGAGCATTTACAAAAGC +
Preference number: 5 (lower is better)
Translates to: LIIKTVNFSLRCFLIPDQTFAHT*WSIYKS
Trigger: GCTTTTGTAAATGCTCCACAACGTATGGGCAAAAGT...CTGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGCCATTCTCTGGATGTTaGGAAATGCTTAACAGATTT +
Preference number: 5 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMPFSGC*EMLNRF
Trigger: AAATCTGTTAAGCATTTCCAAACATCCAGAGAATGG...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp GTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCACTGCACCCAGCCCTATaGTCATGGTTTTTCATATTT +
Preference number: 5 (lower is better)
Translates to: VRLIIKTVNFSLRCFLIPLHPAL*SWFFIF
Trigger: AAATATGAAAAACCATGACAATAGGGCTGGGTGCAG...TGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp ACATTAGAAATTGAGCAGTCCCCTTCCTCAGCTACCAGTGTCAATGCTGGTATGTATCCCCAAACTACCTaGATGGTTACTGTTTCAATA +
Preference number: 5 (lower is better)
Translates to: TLEIEQSPSSATSVNAGMYPQTT*MVTVSI
Trigger: TATTGAAACAGTAACCATCAAGGTAGTTTGGGGATA...CATACCAGCATTGACACTGGTAGCTGAGGAAGGGGACTGCTCAATTTCTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS-3UTR CAA 90 bp CTGGTCAGGCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTTCATTTTGCTGTGAATaGACTTCAACATTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: LVRLIIKTVNFSLRCFLISFCCE*TSTFLS
Trigger: AGAGAGGAATGTTGAAGTCAATTCACAGCAAAATGA...AATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGCCTGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
CDS-3UTR CAA 90 bp GCTAATTATCAAGACAGTCAACTTCTCCCTCCGATGTTTCCTTATTCCAGACCACCATTCTCTGGATGTTaGGAAATGCTTAACAGATTT +
Preference number: 5 (lower is better)
Translates to: ANYQDSQLLPPMFPYSRPPFSGC*EMLNRF
Trigger: AAATCTGTTAAGCATTTCCAAACATCCAGAGAATGG...TGGTCTGGAATAAGGAAACATCGGAGGGAGAAGTTGACTGTCTTGATAATTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225724.9
ENST00000451249.7
CDS CAA 72 bp GATCTTCCCAGTAACTGCTGGTCCCTGCCGCCATCTTaGTCGTCCAACGTCAGCCGGGATAGGGGAGCAGAG +
Preference number: 6 (lower is better)
Translates to: DLPSNCWSLPPS*SSNVSRDRGAE
Trigger: CTCTGCTCCCCTATCCCGGCTGACGTTGGACGACAAAGATGGCGGCAGGGACCAGCAGTTACTGGGAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225724.9
CDS CAA 90 bp CCAATAACACCCCCTAGGATGAGCGAGTCCCGCCGCTTCCTCAGGTaGATCCTCTGGATCAGGCTGTTTACAGCAGGAAAACGATTGGCC +
Preference number: 6 (lower is better)
Translates to: PITPPRMSESRRFLR*ILWIRLFTAGKRLA
Trigger: GGCCAATCGTTTTCCTGCTGTAAACAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGCGGGACTCGCTCATCCTAGGGGGTGTTATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
ENST00000477885.1
ENST00000494918.1
ENST00000581721.5
CDS CCA 72 bp ATGAGCGAGTCCCGCCGCTTCCTCAGGTTGATCCTCTaGATCAGGCTGTTTACAGCAGGAAAACGATTGGCC +
Preference number: 6 (lower is better)
Translates to: MSESRRFLRLIL*IRLFTAGKRLA
Trigger: GGCCAATCGTTTTCCTGCTGTAAACAGCCTGATCCAGAGGATCAACCTGAGGAAGCGGCGGGACTCGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
ENST00000477885.1
ENST00000494918.1
ENST00000581721.5
CDS CCA 72 bp GGTGGCTGTCAAGAGTCCCTGAAGATGTCCCATCAATaGAACGCATACAGCAGCAACAGGATGGTACAGATC +
Preference number: 6 (lower is better)
Translates to: GGCQESLKMSHQ*NAYSSNRMVQI
Trigger: GATCTGTACCATCCTGTTGCTGCTGTATGCGTTCCATTGATGGGACATCTTCAGGGACTCTTGACAGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225724.9
ENST00000414833.2
ENST00000451249.7
ENST00000467337.6
ENST00000477885.1
ENST00000494918.1
ENST00000581721.5
CDS TCA 72 bp GAAATTGGTTTAGCAGTCTGGCATCTAAGGGTTGCGTaGCAGAAGCCACAGTCTGGACACCCACACACAGAT +
Preference number: 6 (lower is better)
Translates to: EIGLAVWHLRVA*QKPQSGHPHTD
Trigger: ATCTGTGTGTGGGTGTCCAGACTGTGGCTTCTGTCACGCAACCCTTAGATGCCAGACTGCTAAACCAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579905.1
CDS TCA 72 bp CCAAATGCCAGTTCGAATCTCGGCACAGCCACTTACTaGCTCTATGATTTATCAACAATCTACTTAACCTAT +
Preference number: 6 (lower is better)
Translates to: PNASSNLGTATY*LYDLSTIYLTY
Trigger: ATAGGTTAAGTAGATTGTTGATAAATCATAGAGTCAGTAAGTGGCTGTGCCGAGATTCGAACTGGCATTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579905.1