RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GORASP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000115806

Ensembl transcript IDs: ENST00000234160.5, ENST00000442798.5, ENST00000444801.5, ENST00000454751.5, ENST00000455067.5, ENST00000471559.5, ENST00000486498.1, ENST00000493692.5, ENST00000497674.5, ENST00000497928.1

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTCAGAAGCATTGGCATCCACAGCCGCAGAAACAGGCTTCTCGCTaGCTGGGGTGGAGTCGCCGACTCTGTCCTCAACGGTGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: TQKHWHPQPQKQASR*LGWSRRLCPQRWWG
Trigger: CCCCCACCACCGTTGAGGACAGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGTTTCTGCGGCTGTGGATGCCAATGCTTCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CCA 90 bp AGAAGCATTGGCATCCACAGCCGCAGAAACAGGCTTCTCGCTGACTaGGGTGGAGTCGCCGACTCTGTCCTCAACGGTGGTGGGGGCCTT +
Preference number: 1 (lower is better)
Translates to: RSIGIHSRRNRLLAD*GGVADSVLNGGGGL
Trigger: AAGGCCCCCACCACCGTTGAGGACAGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGTTTCTGCGGCTGTGGATGCCAATGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR GCA 90 bp CCCGCCACCACCTTTCCCGAAGATGCACACCCCCAGGAACGGCAGTaGAAGCCTGGCAGCAAGCCACCCTTACAATTCTTTTTGGTTGTT +
Preference number: 1 (lower is better)
Translates to: PATTFPEDAHPQERQ*KPGSKPPLQFFLVV
Trigger: AACAACCAAAAAGAATTGTAAGGGTGGCTTGCTGCCAGGCTTGCACTGCCGTTCCTGGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
3UTR CCA 90 bp GGTAATGTAGTAGCTGGATTCATTGGTGGCACAGAAGTGAGGGACTaGTTTACTTGTGGTGGCAATAACGGTACTGTTGGTACACCTGTA +
Preference number: 1 (lower is better)
Translates to: GNVVAGFIGGTEVRD*FTCGGNNGTVGTPV
Trigger: TACAGGTGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAATGAATCCAGCTACTACATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CCA 90 bp TCAGTTAACAGTGCGCGCTGTAGAACTTTAACACAAGTCTTCAGGTaGAATTCCTGTGTAAACCTTAGTAGAGATGCGACTCACGGAGAC +
Preference number: 1 (lower is better)
Translates to: SVNSARCRTLTQVFR*NSCVNLSRDATHGD
Trigger: GTCTCCGTGAGTCGCATCTCTACTAAGGTTTACACAGGAATTCCACCTGAAGACTTGTGTTAAAGTTCTACAGCGCGCACTGTTAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
3UTR TCA 90 bp GTTAAATATACCACGCCAATTCCAAAGAATGGTTCAAAGTTAAGGTaGCTCAGAAGCATTGGCATCCACAGCCGCAGAAACAGGCTTCTC +
Preference number: 1 (lower is better)
Translates to: VKYTTPIPKNGSKLR*LRSIGIHSRRNRLL
Trigger: GAGAAGCCTGTTTCTGCGGCTGTGGATGCCAATGCTTCTGAGTCACCTTAACTTTGAACCATTCTTTGGAATTGGCGTGGTATATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CCA 90 bp AGAAACAATAAAATCAAAGAAAGGCTCCAAACCAGCTCTGTGTCCTaGGGAATTTTCTTGTACCTCAGTCTCCTGATTGGAGTAGCTGGG +
Preference number: 1 (lower is better)
Translates to: RNNKIKERLQTSSVS*GIFLYLSLLIGVAG
Trigger: CCCAGCTACTCCAATCAGGAGACTGAGGTACAAGAAAATTCCCCAGGACACAGAGCTGGTTTGGAGCCTTTCTTTGATTTTATTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CCA 90 bp GAAAAGTTAAAGATGCGTGACATACTGGAGAGTAATAAGACATACTaGAGAGTAGTAAGTGCACACGTGGCAATTAAGGGTTGTAATTTA +
Preference number: 1 (lower is better)
Translates to: EKLKMRDILESNKTY*RVVSAHVAIKGCNL
Trigger: TAAATTACAACCCTTAATTGCCACGTGTGCACTTACTACTCTCCAGTATGTCTTATTACTCTCCAGTATGTCACGCATCTTTAACTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234160.5
3UTR CAA 90 bp GCAGCGTCTGCCTTTGCAGTAGTTGTGGCAGGGTCGGAGGGTGCGTaGCTGGTGGGCGGGAGGGAAGACAGCAGCTCTCCTGAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: AASAFAVVVAGSEGA*LVGGREDSSSPELA
Trigger: AGCAAGCTCAGGAGAGCTGCTGTCTTCCCTCCCGCCCACCAGCAACGCACCCTCCGACCCTGCCACAACTACTGCAAAGGCAGACGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CAA 90 bp GTGCGTTGCTGGTGGGCGGGAGGGAAGACAGCAGCTCTCCTGAGCTaGCTGCAGAAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGA +
Preference number: 2 (lower is better)
Translates to: VRCWWAGGKTAALLS*LQKSSLEPRGMTGG
Trigger: TCCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTTCTGCAGCAAGCTCAGGAGAGCTGCTGTCTTCCCTCCCGCCCACCAGCAACGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp GGGACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCGAGCCCCACTCAACCTaGCAGGATACAACCCACGTC +
Preference number: 2 (lower is better)
Translates to: GTGNLVDAPPPPFPKMHTEPHST*QDTTHV
Trigger: GACGTGGGTTGTATCCTGCCAGGTTGAGTGGGGCTC...GGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
3UTR-3UTR GCA 90 bp CTGGAACCAAGGGGAATGACGGGAGGAACTCGGATGGCAGGGGGAGAGGTGCAATGCCACATCCTAGGCTaGCTTCTCCACCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: LEPRGMTGGTRMAGGEVQCHILG*LLHPMQ
Trigger: CTGCATGGGGTGGAGAAGGCAGCCTAGGATGTGGCA...TTGCACCTCTCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR TCA 90 bp CCGCCACCACCTTTCCCGAAGATGCACACCCCCAGGAACGGCAGTGCAAGCCTGAATACAAGCGCTTTCTaGCATCTCACCCTAGCGTGT +
Preference number: 2 (lower is better)
Translates to: PPPPFPKMHTPRNGSASLNTSAF*HLTLAC
Trigger: ACACGCTAGGGTGAGATGTCAGAAAGCGCTTGTATT...CAGGCTTGCACTGCCGTTCCTGGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
3UTR-3UTR TCA 90 bp ACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCCAATACAAGCGCTTTCTaGCATCTCACCCTAGCGTGT +
Preference number: 2 (lower is better)
Translates to: TGNLVDAPPPPFPKMHTPNTSAF*HLTLAC
Trigger: ACACGCTAGGGTGAGATGTCAGAAAGCGCTTGTATT...GGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
3UTR-3UTR CCA 90 bp CTGGAACCAAGGGGAATGACGGGAGGAACTCGGATGGCAGGGGGAGAGGTGCAACCAGACACGCTCCCGTaGTTAAATATACCACGCCAA +
Preference number: 2 (lower is better)
Translates to: LEPRGMTGGTRMAGGEVQPDTLP*LNIPRQ
Trigger: TTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGG...TTGCACCTCTCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp ACAGGCTTCTCGCTGACTGGGGTGGAGTCGCCGACTCTGTCCTCAACGGTGGTGTTAACTGAGGACAGCTaGACCTCTGTAAACCCATCT +
Preference number: 2 (lower is better)
Translates to: TGFSLTGVESPTLSSTVVLTEDS*TSVNPS
Trigger: AGATGGGTTTACAGAGGTCCAGCTGTCCTCAGTTAA...CACCACCGTTGAGGACAGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp TCTCCTGAGCTTGCTGCAGAAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGCCTGATTGGAGTAGCTaGGATTACAGGTGCACACCA +
Preference number: 2 (lower is better)
Translates to: SPELAAEELSGTKGNDGRPDWSS*DYRCTP
Trigger: TGGTGTGCACCTGTAATCCCAGCTACTCCAATCAGG...CCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTTCTGCAGCAAGCTCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp AGCTCTCCTGAGCTTGCTGCAGAAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGTAGCTGGATTCATTaGTGGCACAGAAGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: SSPELAAEELSGTKGNDGSSWIH*WHRSEG
Trigger: TCCCTCACTTCTGTGCCACCAATGAATCCAGCTACT...CCCGTCATTCCCCTTGGTTCCAGAGAGCTCTTCTGCAGCAAGCTCAGGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR GCA 90 bp AAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGAACTCGGATGGCAGGGGGAGCCTTCTCCACCCCATaGAGAATTTGGTGTAATAAT +
Preference number: 2 (lower is better)
Translates to: KSSLEPRGMTGGTRMAGGAFSTP*RIWCNN
Trigger: ATTATTACACCAAATTCTGCATGGGGTGGAGAAGGC...TCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp TGCTTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGAGCCCCACTCAACCTaGCAGGATACAACCCACGTC +
Preference number: 2 (lower is better)
Translates to: CFPSIAIILQGATECHLLEPHST*QDTTHV
Trigger: GACGTGGGTTGTATCCTGCCAGGTTGAGTGGGGCTC...CAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234160.5
3UTR-3UTR CCA 90 bp GACACGCTCCCGTGGTTAAATATACCACGCCAATTCCAAAGAATGGTTCAAAGTCGGGAGGAACTCGGATaGCAGGGGGAGAGGTGCAAT +
Preference number: 2 (lower is better)
Translates to: DTLPWLNIPRQFQRMVQSREELG*QGERCN
Trigger: ATTGCACCTCTCCCCCTGCCATCCGAGTTCCTCCCG...ACTTTGAACCATTCTTTGGAATTGGCGTGGTATATTTAACCACGGGAGCGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp TTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTTACGGCAGTGCAAGCCTaGCAGCAAGCCACCCTTACA +
Preference number: 2 (lower is better)
Translates to: FPSIAIILQGATECHLLVTAVQA*QQATLT
Trigger: TGTAAGGGTGGCTTGCTGCCAGGCTTGCACTGCCGT...AACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
3UTR-3UTR CCA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTCGTCTCCTGCCCTGCTaGTCTTTCAGGCCACTCGGC +
Preference number: 2 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSRLLPC*SFRPLG
Trigger: GCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACG...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455067.5
3UTR CAA 90 bp ATCAAAGAAAGGCTCCAAACCAGCTCTGTGTCCTGGGGAATTTTCTaGTACCTCAGTCTCCTGATTGGAGTAGCTGGGATTACAGGTGCA +
Preference number: 2 (lower is better)
Translates to: IKERLQTSSVSWGIF*YLSLLIGVAGITGA
Trigger: TGCACCTGTAATCCCAGCTACTCCAATCAGGAGACTGAGGTACAAGAAAATTCCCCAGGACACAGAGCTGGTTTGGAGCCTTTCTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR TCA 90 bp GGCAGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGACAGGTTACTTGGTGTaGCTGAGGTCTCTCGCAGTT +
Preference number: 2 (lower is better)
Translates to: GRIQPTSSFSFPLGIIYRTGYLV*LRSLAV
Trigger: AACTGCGAGAGACCTCAGTCACACCAAGTAACCTGT...CCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR TCA 90 bp GGCAGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGTTGGTGGCACAGAAGTaGGGGACTGGTTTACTTGTG +
Preference number: 2 (lower is better)
Translates to: GRIQPTSSFSFPLGIIYRLVAQK*GTGLLV
Trigger: CACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAA...CCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR GCA 90 bp TTAACACAAGTCTTCAGGTGGAATTCCTGTGTAAACCTTAGTAGAGATGCGACTCACCTTTCCCGAAGATaGACACCCCCAGGAACGGCA +
Preference number: 2 (lower is better)
Translates to: LTQVFRWNSCVNLSRDATHLSRR*TPPGTA
Trigger: TGCCGTTCCTGGGGGTGTGCATCTTCGGGAAAGGTG...AGTCGCATCTCTACTAAGGTTTACACAGGAATTCCACCTGAAGACTTGTGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234160.5
3UTR-3UTR CCA 90 bp AAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACCCCTGGCATGATGTGTaGTGCTGGGAGGTTGAGGTT +
Preference number: 2 (lower is better)
Translates to: KSLYRLQFSEVVCILANDPWHDV*CWEVEV
Trigger: AACCTCAACCTCCCAGCACCACACATCATGCCAGGG...GTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp ACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCCTCTGTCCTCAACGGTaGTGGGGGCCTTGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: TKSKNLFTVYSLVRWSAFLCPQR*WGPWQW
Trigger: CCACTGCCAAGGCCCCCACCACCGTTGAGGACAGAG...GAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp AGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGATGCCAGACACGCTCCCGTaGTTAAATATACCACGCCAA +
Preference number: 2 (lower is better)
Translates to: RIQPTSSFSFPLGIIYRMPDTLP*LNIPRQ
Trigger: TTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGG...CATCCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
3UTR-3UTR CCA 90 bp GGCAGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGACAGAAGTGAGGGACTaGTTTACTTGTGGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: GRIQPTSSFSFPLGIIYRTEVRD*FTCGGN
Trigger: ATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGT...CCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CAA 90 bp CTCAACCTGGCAGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTaGGAATTATTTACAGGATGCCTACAGATACGGTACAAACTAGTA +
Preference number: 2 (lower is better)
Translates to: LNLAGYNPRPRLVFP*ELFTGCLQIRYKLV
Trigger: TACTAGTTTGTACCGTATCTGTAGGCATCCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCTGCCAGGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
3UTR-3UTR TCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGAGTTACTTGGTGTGACTaGGGTCTCTCGCAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: LQFSEVVCILANDLQSTRVTWCD*GLSQFQ
Trigger: TTGGAACTGCGAGAGACCTCAGTCACACCAAGTAAC...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp AGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATACTTCCAGGCCATTTaGTTTTCCGTCTCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: SIFTGFSTFAFSRSLRVSYFQAI*FSVSCP
Trigger: AGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTA...TGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
3UTR-3UTR CCA 90 bp GGCAGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGACACAAGTCTTCAGGTaGAATTCCTGTGTAAACCTT +
Preference number: 2 (lower is better)
Translates to: GRIQPTSSFSFPLGIIYRTQVFR*NSCVNL
Trigger: AAGGTTTACACAGGAATTCCACCTGAAGACTTGTGT...CCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234160.5
3UTR-3UTR CCA 90 bp TTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTCTCCTCAGTCTCCTGATTaGAGTAGCTGGGATTACAGG +
Preference number: 2 (lower is better)
Translates to: FTGFSTFAFSRSLRVSLSPQSPD*SSWDYR
Trigger: CCTGTAATCCCAGCTACTCCAATCAGGAGACTGAGG...AGACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp AGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCAACCAGCTCTGTGTCCTaGGGAATTTTCTTGTACTTC +
Preference number: 2 (lower is better)
Translates to: SIFTGFSTFAFSRSLRVSTSSVS*GIFLYF
Trigger: GAAGTACAAGAAAATTCCCCAGGACACAGAGCTGGT...TGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
3UTR-3UTR CCA 90 bp AGTTTCAATGGTTTTGCTTCATGTGTTTCGATAAGGCTGAATAGATCTTCAGACACCAGCTCTGTGTCCTaGGGAATTTTCTTGTACCTC +
Preference number: 2 (lower is better)
Translates to: SFNGFASCVSIRLNRSSDTSSVS*GIFLYL
Trigger: GAGGTACAAGAAAATTCCCCAGGACACAGAGCTGGT...GTCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGCAAAACCATTGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR GCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGACCAAACATTTTCATTTaGCCCATCAAAGCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: LQFSEVVCILANDLQSTRPNIFI*PIKAAE
Trigger: TTCTGCAGCTTTGATGGGGCAAATGAAAATGTTTGG...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp ACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTACAGTTTAGTGAGGTaGTCTGCATTCTCGCAAACG +
Preference number: 2 (lower is better)
Translates to: TKSKNLFTVYSLVRWSAFYSLVR*SAFSQT
Trigger: CGTTTGCGAGAATGCAGACCACCTCACTAAACTGTA...GAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
3UTR-3UTR CCA 90 bp AGTTTCAATGGTTTTGCTTCATGTGTTTCGATAAGGCTGAATAGATCTTCAGACTACAGTTTAGTGAGGTaGTCTGCATTCTCGCAAACG +
Preference number: 2 (lower is better)
Translates to: SFNGFASCVSIRLNRSSDYSLVR*SAFSQT
Trigger: CGTTTGCGAGAATGCAGACCACCTCACTAAACTGTA...GTCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGCAAAACCATTGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CCA 90 bp ACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCCTTTCCTTCCTCAAATaGGCGTGTAGGTATTCGATG +
Preference number: 2 (lower is better)
Translates to: TKSKNLFTVYSLVRWSAFLSFLK*ACRYSM
Trigger: CATCGAATACCTACACGCCCATTTGAGGAAGGAAAG...GAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR GCA 90 bp TCATGTGTTTCGATAAGGCTGAATAGATCTTCAGACTCATTCATGACTGTATCTAGGCTTTTCAACGTTTaGTTTCAGCAGATCCTTAAG +
Preference number: 2 (lower is better)
Translates to: SCVSIRLNRSSDSFMTVSRLFNV*FQQILK
Trigger: CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCT...AGATACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442798.5
ENST00000444801.5
3UTR CAA 90 bp GAATTTGGTGTAATAATCACTTCTCGACAGTTATCAGTGTCTGTGTaGTACACATACAGTTTCAATGGTTTTGCTTCATGTGTTTCGATA +
Preference number: 2 (lower is better)
Translates to: EFGVIITSRQLSVSV*YTYSFNGFASCVSI
Trigger: TATCGAAACACATGAAGCAAAACCATTGAAACTGTATGTGTACAACACAGACACTGATAACTGTCGAGAAGTGATTATTACACCAAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR GCA 72 bp GTACTTCCAGGCCATTTGGTTTTCCGTCTCCTGCCCTaGTGGTCTTTCAGGCCACTCGGCCGGCGCCGAGGT +
Preference number: 3 (lower is better)
Translates to: VLPGHLVFRLLP*WSFRPLGRRRG
Trigger: ACCTCGGCGCCGGCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455067.5
3UTR CCA 72 bp GGCATCCACAGCCGCAGAAACAGGCTTCTCGCTGACTaGGGTGGAGTCGCCGACTCTGTCCTCAACGGTGGT +
Preference number: 3 (lower is better)
Translates to: GIHSRRNRLLAD*GGVADSVLNGG
Trigger: ACCACCGTTGAGGACAGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGTTTCTGCGGCTGTGGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CCA 72 bp CTTCCAGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTaGTCTTTCAGGCCACTCGGCCGGCGCCGAGGTGAT +
Preference number: 3 (lower is better)
Translates to: LPGHLVFRLLPC*SFRPLGRRRGD
Trigger: ATCACCTCGGCGCCGGCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455067.5
3UTR TCA 72 bp GCTTGCTGCAGAAGAGCTCTCTGGAACCAAGGGGAATaGCGGGAGGAACTCGGATGGCAGGGGGAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: ACCRRALWNQGE*REELGWQGERC
Trigger: GCACCTCTCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTTCTGCAGCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR TCA 72 bp CATTGGCATCCACAGCCGCAGAAACAGGCTTCTCGCTaGCTGGGGTGGAGTCGCCGACTCTGTCCTCAACGG +
Preference number: 3 (lower is better)
Translates to: HWHPQPQKQASR*LGWSRRLCPQR
Trigger: CCGTTGAGGACAGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGTTTCTGCGGCTGTGGATGCCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR GCA 72 bp TTCTTGTACTTCCAGGCCATTTGGTTTTCCGTCTCCTaGCCTGCTGGTCTTTCAGGCCACTCGGCCGGCGCC +
Preference number: 3 (lower is better)
Translates to: FLYFQAIWFSVS*PAGLSGHSAGA
Trigger: GGCGCCGGCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455067.5
3UTR-3UTR CAA 90 bp CTGGAACCAAGGGGAATGACGGGAGGAACTCGGATGGCAGGGGGAGAGGTGCAATCCTGGGGAATTTTCTaGTACCTCAGTCTCCTGATT +
Preference number: 3 (lower is better)
Translates to: LEPRGMTGGTRMAGGEVQSWGIF*YLSLLI
Trigger: AATCAGGAGACTGAGGTACAAGAAAATTCCCCAGGA...TTGCACCTCTCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CCA 72 bp CGAAGATGCACACCCCCAGGAACGGCAGTGCAAGCCTaGCAGCAAGCCACCCTTACAATTCTTTTTGGTTGT +
Preference number: 3 (lower is better)
Translates to: RRCTPPGTAVQA*QQATLTILFGC
Trigger: ACAACCAAAAAGAATTGTAAGGGTGGCTTGCTGCCAGGCTTGCACTGCCGTTCCTGGGGGTGTGCATCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
3UTR-3UTR CAA 90 bp CCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATGTTTTGTCCTGGGGAATTTTCTaGTACTTCCAGGCCATTTGG +
Preference number: 3 (lower is better)
Translates to: PPHRLLGVTEVSRSSNVLSWGIF*YFQAIW
Trigger: CCAAATGGCCTGGAAGTACAAGAAAATTCCCCAGGA...CAAAACATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
3UTR-3UTR CAA 90 bp AAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACGGTGACTCAGAAGCATaGGCATCCACAGCCGCAGAA +
Preference number: 3 (lower is better)
Translates to: KSLYRLQFSEVVCILANDGDSEA*ASTAAE
Trigger: TTCTGCGGCTGTGGATGCCAATGCTTCTGAGTCACC...GTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR-3UTR CAA 90 bp CATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTACTTCCAGGCCATTaGGTTTTCCGTCTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: HLYRLFNVCFQQILKSVIVLPGH*VFRLLP
Trigger: GGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTAC...AATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
3UTR TCA 72 bp ATTCTGAGAGCTCAAAACAAGGATCCGCGTATAGGCTaGAGAAAAAGACGTTCAGTTAACAGTGCGCGCTGT +
Preference number: 3 (lower is better)
Translates to: ILRAQNKDPRIG*RKRRSVNSARC
Trigger: ACAGCGCGCACTGTTAACTGAACGTCTTTTTCTTCAGCCTATACGCGGATCCTTGTTTTGAGCTCTCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234160.5
3UTR-3UTR CAA 90 bp GGATTCATTGGTGGCACAGAAGTGAGGGACTGGTTTACTTGTGGTGGCAATAACAAAGTACAAGAAATGTaGCGTGTGAGTATTAGGCAT +
Preference number: 3 (lower is better)
Translates to: GFIGGTEVRDWFTCGGNNKVQEM*RVSIRH
Trigger: ATGCCTAATACTCACACGCAACATTTCTTGTACTTT...GTTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAATGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CCA 72 bp AAGATGCGTGACATACTGGAGAGTAATAAGACATACTaGAGAGTAGTAAGTGCACACGTGGCAATTAAGGGT +
Preference number: 3 (lower is better)
Translates to: KMRDILESNKTY*RVVSAHVAIKG
Trigger: ACCCTTAATTGCCACGTGTGCACTTACTACTCTCCAGTATGTCTTATTACTCTCCAGTATGTCACGCATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
3UTR-3UTR CAA 90 bp CATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTTCCTGGGGAATTTTCTaGTACTTCCAGGCCATTTGG +
Preference number: 3 (lower is better)
Translates to: HLYRLFNVCFQQILKSVISWGIF*YFQAIW
Trigger: CCAAATGGCCTGGAAGTACAAGAAAATTCCCCAGGA...AATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
3UTR-3UTR CAA 90 bp TTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTTAAAGTACAAGAAATGTaGCGTGTGAGTATTAGGCAT +
Preference number: 3 (lower is better)
Translates to: FPSIAIILQGATECHLLVKVQEM*RVSIRH
Trigger: ATGCCTAATACTCACACGCAACATTTCTTGTACTTT...AACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
3UTR GCA 72 bp GCTATAGATAAGCATCTTTACAGGCTTTTCAACGTTTaGTTTCAGCAGATCCTTAAGAGTGTCATTGTCTTT +
Preference number: 3 (lower is better)
Translates to: AIDKHLYRLFNV*FQQILKSVIVF
Trigger: AAAGACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATCTATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442798.5
ENST00000454751.5
ENST00000455067.5
3UTR CCA 72 bp AGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTaGTCTGCATTCTCGCAAACGACTTACAAAGTACAA +
Preference number: 3 (lower is better)
Translates to: SKNLFTVYSLVR*SAFSQTTYKVQ
Trigger: TTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTTTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp AGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTGGTCTTTCAGGCCACTCGGCCGCGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGA +
Preference number: 4 (lower is better)
Translates to: RPFGFPSPALLVFQATRPRGSPR*PRPGSR
Trigger: TCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACG...CGGCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS-3UTR GCA 90 bp TCTCCTGAGCTTGCTGCAGAAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGGGCAGGGTCGGAGGGTaGGTTGCTGGTGGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SPELAAEELSGTKGNDGRGRVGG*VAGGRE
Trigger: CTCCCGCCCACCAGCAACGCACCCTCCGACCCTGCC...CCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTTCTGCAGCAAGCTCAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp GGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCCAGGCGGGAGGAACTCGGATaGCAGGGGGAGAGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: GNLVDAPPPPFPKMHTPRREELG*QGERCN
Trigger: ATTGCACCTCTCCCCCTGCCATCCGAGTTCCTCCCG...CCTGGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp ACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCCCTCTGTCCTCAACGGTaGTGGGGGCCTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TGNLVDAPPPPFPKMHTPLCPQR*WGPWQW
Trigger: CCACTGCCAAGGCCCCCACCACCGTTGAGGACAGAG...GGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp GGGACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCAGCCAACCCCTGGCATaGTGTGTGGTGCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GTGNLVDAPPPPFPKMHTSQPLA*CVVLGG
Trigger: ACCTCCCAGCACCACACATCATGCCAGGGGTTGGCT...GGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp GGGACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCGCGTCACATCCACAGTaGGTGAGGAGGCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GTGNLVDAPPPPFPKMHTASHPQ*VRRQRL
Trigger: CAGACGCTGCCTCCTCACTCACTGTGGATGTGACGC...GGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp TGCAGTAGTTGTGGCAGGGTCGGAGGGTGCGTTGCTGGTGGGCGGGAGGGAAGAGGCAGCGTCTGCCTTTaGAGTAGTTGTGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CSSCGRVGGCVAGGREGRGSVCL*SSCGRV
Trigger: GACCCTGCCACAACTACTGCAAAGGCAGACGCTGCC...TCTTCCCTCCCGCCCACCAGCAACGCACCCTCCGACCCTGCCACAACTACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp TGCAGTAGTTGTGGCAGGGTCGGAGGGTGCGTTGCTGGTGGGCGGGAGGGAAGAACGGCAGTGCAAGCCTaGCAGCAAGCCACCCTTACA +
Preference number: 4 (lower is better)
Translates to: CSSCGRVGGCVAGGREGRTAVQA*QQATLT
Trigger: TGTAAGGGTGGCTTGCTGCCAGGCTTGCACTGCCGT...TCTTCCCTCCCGCCCACCAGCAACGCACCCTCCGACCCTGCCACAACTACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp AGCTCTCCTGAGCTTGCTGCAGAAGAGCTCTCTGGAACCAAGGGGAATGACGGGTGGGGGCCTTGGCAGTaGGGGGCGTCACATCCACAG +
Preference number: 4 (lower is better)
Translates to: SSPELAAEELSGTKGNDGWGPWQ*GASHPQ
Trigger: CTGTGGATGTGACGCCCCCCACTGCCAAGGCCCCCA...CCCGTCATTCCCCTTGGTTCCAGAGAGCTCTTCTGCAGCAAGCTCAGGAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp CCCTGGCCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATCGTCTCCTGCCCTGCTaGTCTTTCAGGCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: PWPPHRLLGVTEVSRSSNRLLPC*SFRPLG
Trigger: GCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACG...ATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp TACTTCCAGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTGGTCTTTCAGGCCACCCCCAGCGCACCGCCTaGTCTAATCCTCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: YFQAIWFSVSCPAGLSGHPQRTA*SNPPRS
Trigger: GCTACGCGGAGGATTAGAGCAGGCGGTGCGCTGGGG...GTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS-3UTR CCA 90 bp AAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGAACTCGGATGGCAGGGGGACGGGAGGAACTCGGATaGCAGGGGGAGAGGTGCAAT +
Preference number: 4 (lower is better)
Translates to: KSSLEPRGMTGGTRMAGGREELG*QGERCN
Trigger: ATTGCACCTCTCCCCCTGCCATCCGAGTTCCTCCCG...TCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CAA 72 bp TGGTGGGCGGGAGGGAAGACAGCAGCTCTCCTGAGCTaGCTGCAGAAGAGCTCTCTGGAACCAAGGGGAATG +
Preference number: 4 (lower is better)
Translates to: WWAGGKTAALLS*LQKSSLEPRGM
Trigger: CATTCCCCTTGGTTCCAGAGAGCTCTTCTGCAGCAAGCTCAGGAGAGCTGCTGTCTTCCCTCCCGCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR TCA 90 bp AAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGAACTCGGATGGCAGGGGGATGGAACCAAGGGGAATaGCGGGAGGAACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: KSSLEPRGMTGGTRMAGGWNQGE*REELGW
Trigger: CCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCA...TCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp AGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTGGTCTTTCAGGCCACTCGGCCGTGGTTTTCCGTCTCCTaGCCTGCTGGTCTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RPFGFPSPALLVFQATRPWFSVS*PAGLSG
Trigger: GCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCA...CGGCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS-3UTR CCA 90 bp AGCTCTCCTGAGCTTGCTGCAGAAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGCTTCTCGCTGACTaGGGTGGAGTCGCCGACTCT +
Preference number: 4 (lower is better)
Translates to: SSPELAAEELSGTKGNDGRLLAD*GGVADS
Trigger: AGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCT...CCCGTCATTCCCCTTGGTTCCAGAGAGCTCTTCTGCAGCAAGCTCAGGAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp CCCTGGCCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATTCACAGTCACCACTTTaGAGACGTTGCCTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PWPPHRLLGVTEVSRSSNSQSPL*RRCLRA
Trigger: GGCGCGGAGGCAACGTCTCCAAAGTGGTGACTGTGA...ATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454751.5
CDS-3UTR GCA 90 bp CCGCCACCACCTTTCCCGAAGATGCACACCCCCAGGAACGGCAGTGCAAGCCTGTTGCCCCATCAAAGCTaGAGAAACGAATGCTCACTC +
Preference number: 4 (lower is better)
Translates to: PPPPFPKMHTPRNGSASLLPHQS*RNECSL
Trigger: GAGTGAGCATTCGTTTCTGCAGCTTTGATGGGGCAA...CAGGCTTGCACTGCCGTTCCTGGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp CCGCCACCACCTTTCCCGAAGATGCACACCCCCAGGAACGGCAGTGCAAGCCTGCAGAGTGCCACCTTCTaGTTTAAAACTGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: PPPPFPKMHTPRNGSASLQSATF*FKTVAP
Trigger: AGGTGCCACAGTTTTAAACCAGAAGGTGGCACTCTG...CAGGCTTGCACTGCCGTTCCTGGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp GGGACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCTGATTGGAGTAGCTaGGATTACAGGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: GTGNLVDAPPPPFPKMHTPDWSS*DYRCTP
Trigger: TGGTGTGCACCTGTAATCCCAGCTACTCCAATCAGG...GGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CAA 72 bp GGCATGATGTGTGGTGCTGGGAGGTTGAGGTTGAGGTaGGGGAGGTTGGGCAGTCCTGCTGGTAAAGGCATC +
Preference number: 4 (lower is better)
Translates to: GMMCGAGRLRLR*GRLGSPAGKGI
Trigger: GATGCCTTTACCAGCAGGACTGCCCAACCTCCCCAACCTCAACCTCAACCTCCCAGCACCACACATCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR TCA 90 bp CAGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTGGTCTTTCAGGCCACTCGGCCACAGGTTACTTGGTGTaGCTGAGGTCTCTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: QAIWFSVSCPAGLSGHSATGYLV*LRSLAV
Trigger: AACTGCGAGAGACCTCAGTCACACCAAGTAACCTGT...GGCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS-3UTR TCA 90 bp GGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCCAGGGGTTCAAAGTTAAGGTaGCTCAGAAGCATTGGCATC +
Preference number: 4 (lower is better)
Translates to: GNLVDAPPPPFPKMHTPRGSKLR*LRSIGI
Trigger: GATGCCAATGCTTCTGAGTCACCTTAACTTTGAACC...CCTGGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp TGCTTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGCGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGA +
Preference number: 4 (lower is better)
Translates to: CFPSIAIILQGATECHLLRGSPR*PRPGSR
Trigger: TCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACG...CAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp ACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCCAGCTGCAGAAACGAATaGTCACTCCCAATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TGNLVDAPPPPFPKMHTPSCRNE*SLPISP
Trigger: AGGGCTTATTGGGAGTGAGCATTCGTTTCTGCAGCT...GGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp TTTCTTGTACTTCCAGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTGGTCTTTCTTTGCGAGGAGCCCATaGCGGCGGGCGATCGGTGTG +
Preference number: 4 (lower is better)
Translates to: FLVLPGHLVFRLLPCWSFFARSP*RRAIGV
Trigger: CACACCGATCGCCCGCCGCCATGGGCTCCTCGCAAA...GAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTACAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS-3UTR CCA 90 bp ACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCCAGTAGCTGGATTCATTaGTGGCACAGAAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TGNLVDAPPPPFPKMHTPSSWIH*WHRSEG
Trigger: TCCCTCACTTCTGTGCCACCAATGAATCCAGCTACT...GGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp ACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCCACCAGCTCTGTGTCCTaGGGAATTTTCTTGTACCTC +
Preference number: 4 (lower is better)
Translates to: TGNLVDAPPPPFPKMHTPTSSVS*GIFLYL
Trigger: GAGGTACAAGAAAATTCCCCAGGACACAGAGCTGGT...GGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp CAGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTGGTCTTTCAGGCCACTCGGCCTACTTCCAGGCCATTTaGTTTTCCGTCTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QAIWFSVSCPAGLSGHSAYFQAI*FSVSCP
Trigger: AGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTA...GGCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS-3UTR TCA 90 bp CCCTGGCCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATGTTACTTGGTGTGACTaGGGTCTCTCGCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: PWPPHRLLGVTEVSRSSNVTWCD*GLSQFQ
Trigger: TTGGAACTGCGAGAGACCTCAGTCACACCAAGTAAC...ATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR CCA 90 bp ACAGGCTTCTCGCTGACTGGGGTGGAGTCGCCGACTCTGTCCTCAACGGTGGTGACAGAAGTGAGGGACTaGTTTACTTGTGGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TGFSLTGVESPTLSSTVVTEVRD*FTCGGN
Trigger: ATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGT...CACCACCGTTGAGGACAGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp AAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGAACTCGGATGGCAGGGGGACCTCAGTCTCCTGATTaGAGTAGCTGGGATTACAGG +
Preference number: 4 (lower is better)
Translates to: KSSLEPRGMTGGTRMAGGPQSPD*SSWDYR
Trigger: CCTGTAATCCCAGCTACTCCAATCAGGAGACTGAGG...TCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp CCCTGGCCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATAGCTGCAGAAACGAATaGTCACTCCCAATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PWPPHRLLGVTEVSRSSNSCRNE*SLPISP
Trigger: AGGGCTTATTGGGAGTGAGCATTCGTTTCTGCAGCT...ATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp CCCTGGCCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATTTGCCCCATCAAAGCTaGAGAAACGAATGCTCACTC +
Preference number: 4 (lower is better)
Translates to: PWPPHRLLGVTEVSRSSNLPHQS*RNECSL
Trigger: GAGTGAGCATTCGTTTCTGCAGCTTTGATGGGGCAA...ATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
CDS-3UTR GCA 90 bp GGGACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCGCCTTCTCCACCCCATaGAGAATTTGGTGTAATAAT +
Preference number: 4 (lower is better)
Translates to: GTGNLVDAPPPPFPKMHTAFSTP*RIWCNN
Trigger: ATTATTACACCAAATTCTGCATGGGGTGGAGAAGGC...GGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp ACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCCGCCTTCTCCACCCCATaGAGAATTTGGTGTAATAAT +
Preference number: 4 (lower is better)
Translates to: TGNLVDAPPPPFPKMHTPAFSTP*RIWCNN
Trigger: ATTATTACACCAAATTCTGCATGGGGTGGAGAAGGC...GGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp CCGCCACCACCTTTCCCGAAGATGCACACCCCCAGGAACGGCAGTGCAAGCCTGACCCCATGCAGAATTTaGTGTAATAATCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: PPPPFPKMHTPRNGSASLTPCRI*CNNHFS
Trigger: CGAGAAGTGATTATTACACCAAATTCTGCATGGGGT...CAGGCTTGCACTGCCGTTCCTGGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp CCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATGTTTTGAGTTTCGGGGAGGCATaGAAGGAAGAGGTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: PPHRLLGVTEVSRSSNVLSFGEA*KEEVAD
Trigger: GTCTGCCACCTCTTCCTTCCATGCCTCCCCGAAACT...CAAAACATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp TGCTTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGCGGAGGGTGCGTTGCTaGTGGGCGGGAGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: CFPSIAIILQGATECHLLRRVRC*WAGGKT
Trigger: TGTCTTCCCTCCCGCCCACCAGCAACGCACCCTCCG...CAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR TCA 90 bp AAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGAACTCGGATGGCAGGGGGAGGTTCAAAGTTAAGGTaGCTCAGAAGCATTGGCATC +
Preference number: 4 (lower is better)
Translates to: KSSLEPRGMTGGTRMAGGGSKLR*LRSIGI
Trigger: GATGCCAATGCTTCTGAGTCACCTTAACTTTGAACC...TCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp CTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTCCGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGA +
Preference number: 4 (lower is better)
Translates to: LYRLFNVCFQQILKSVIVRGSPR*PRPGSR
Trigger: TCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACG...GACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp TTAACACAAGTCTTCAGGTGGAATTCCTGTGTAAACCTTAGTAGAGATGCGACTGGCAGGGTCGGAGGGTaGGTTGCTGGTGGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LTQVFRWNSCVNLSRDATGRVGG*VAGGRE
Trigger: CTCCCGCCCACCAGCAACGCACCCTCCGACCCTGCC...AGTCGCATCTCTACTAAGGTTTACACAGGAATTCCACCTGAAGACTTGTGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp TTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTTTTTGCGAGGAGCCCATaGCGGCGGGCGATCGGTGTG +
Preference number: 4 (lower is better)
Translates to: FPSIAIILQGATECHLLVFARSP*RRAIGV
Trigger: CACACCGATCGCCCGCCGCCATGGGCTCCTCGCAAA...AACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp GGGACAGGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCACCAGCCATTTGTCCTaGAAGAGAAATTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GTGNLVDAPPPPFPKMHTTSHLS*KRNFLS
Trigger: GGAAAGAAAATTTCTCTTCCAGGACAAATGGCTGGT...GGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTCGGCCGGCGCCGAGGTaGTTTAACACCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSRPAPR*FNTCRR
Trigger: GCGGCGGCAGGTGTTAAATCACCTCGGCGCCGGCCG...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR TCA 90 bp ATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGCGGCCGGCGCCGAGGTaGTTTAACACCTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IFTGFSTFAFSRSLRVSLRPAPR*FNTCRR
Trigger: GCGGCGGCAGGTGTTAAATCACCTCGGCGCCGGCCG...CAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp ATCACTTCTCGACAGTTATCAGTGTCTGTGTTGTACACATACAGTTTCAATGGTCGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGA +
Preference number: 4 (lower is better)
Translates to: ITSRQLSVSVLYTYSFNGRGSPR*PRPGSR
Trigger: TCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACG...ACCATTGAAACTGTATGTGTACAACACAGACACTGATAACTGTCGAGAAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTCGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGA +
Preference number: 4 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSRGSPR*PRPGSR
Trigger: TCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACG...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp TGCAGTAGTTGTGGCAGGGTCGGAGGGTGCGTTGCTGGTGGGCGGGAGGGAAGAGAATTATTTACAGGATaGCTACAGATACGGTACAAA +
Preference number: 4 (lower is better)
Translates to: CSSCGRVGGCVAGGREGRELFTG*LQIRYK
Trigger: TTTGTACCGTATCTGTAGGCATCCTGTAAATAATTC...TCTTCCCTCCCGCCCACCAGCAACGCACCCTCCGACCCTGCCACAACTACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp CCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATGTTTTGGTGACTCAGAAGCATTaGCATCCACAGCCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PPHRLLGVTEVSRSSNVLVTQKH*HPQPQK
Trigger: TTTCTGCGGCTGTGGATGCCAATGCTTCTGAGTCAC...CAAAACATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR TCA 90 bp TGTCTGAGTGATTCTGAGAGCTCAAAACAAGGATCCGCGTATAGGCTGAAGAAAAAACAGGCTTCTCGCTaGCTGGGGTGGAGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: CLSDSESSKQGSAYRLKKKQASR*LGWSRR
Trigger: TCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGTTT...TTTCTTCAGCCTATACGCGGATCCTTGTTTTGAGCTCTCAGAATCACTCAGACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGACCCCAGCGCACCGCCTaGTCTAATCCTCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRPQRTA*SNPPRS
Trigger: GCTACGCGGAGGATTAGAGCAGGCGGTGCGCTGGGG...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp GTGCCACCTTCTGGTTTAAAACTGTGGCACCTTATTTCTTTTGAAATGTCACTTGGTCGGAGGGTGCGTTaGTGGTGGGCGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VPPSGLKLWHLISFEMSLGRRVR*WWAGGK
Trigger: CTTCCCTCCCGCCCACCAGCAACGCACCCTCCGACC...AAGTGACATTTCAAAAGAAATAAGGTGCCACAGTTTTAAACCAGAAGGTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp TGTGTTTCGATAAGGCTGAATAGATCTTCAGACTCATTCATGACTGTATCTGCTGGTCGGAGGGTGCGTTaGTGGTGGGCGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CVSIRLNRSSDSFMTVSAGRRVR*WWAGGK
Trigger: CTTCCCTCCCGCCCACCAGCAACGCACCCTCCGACC...AGCAGATACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp AAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCTTTGCGAGGAGCCCATaGCGGCGGGCGATCGGTGTG +
Preference number: 4 (lower is better)
Translates to: KHLYRLFNVCFQQILKSVFARSP*RRAIGV
Trigger: CACACCGATCGCCCGCCGCCATGGGCTCCTCGCAAA...GACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR CCA 90 bp AGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGATGAGGGTGCGTTGCTGGTaGGCGGGAGGGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: RIQPTSSFSFPLGIIYRMRVRCW*AGGKTA
Trigger: TGCTGTCTTCCCTCCCGCCCACCAGCAACGCACCCT...CATCCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp CGACTCACGGAGACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGGGGCCTTGGCAGTaGGGGGCGTCACATCCACAG +
Preference number: 4 (lower is better)
Translates to: RLTETKSKNLFTVYSLVRWGPWQ*GASHPQ
Trigger: CTGTGGATGTGACGCCCCCCACTGCCAAGGCCCCCA...CCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGTCTCCGTGAGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp AAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACCTCTGTCCTCAACGGTaGTGGGGGCCTTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KSLYRLQFSEVVCILANDLCPQR*WGPWQW
Trigger: CCACTGCCAAGGCCCCCACCACCGTTGAGGACAGAG...GTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp AGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGATGAGCCAACCCCTGGCATaGTGTGTGGTGCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RIQPTSSFSFPLGIIYRMSQPLA*CVVLGG
Trigger: ACCTCCCAGCACCACACATCATGCCAGGGGTTGGCT...CATCCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp GCTTCATGTGTTTCGATAAGGCTGAATAGATCTTCAGACTCATTCATGACTGTACCCCAGCGCACCGCCTaGTCTAATCCTCCGCGTAGC +
Preference number: 4 (lower is better)
Translates to: ASCVSIRLNRSSDSFMTVPQRTA*SNPPRS
Trigger: GCTACGCGGAGGATTAGAGCAGGCGGTGCGCTGGGG...TACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444801.5
CDS-3UTR GCA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGGGGATCTCGACGCTTTaGGAGGAGCCCATGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVGISTL*EEPMAA
Trigger: CGCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCC...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp TTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTTGGGGGAGAGGTGCAATaGCAGGTAAGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: FPSIAIILQGATECHLLVGGEVQ*QVSFGE
Trigger: CTCCCCGAAACTTACCTGGCATTGCACCTCTCCCCC...AACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTTTGCGAGGAGCCCATaGCGGCGGGCGATCGGTGTG +
Preference number: 4 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVFARSP*RRAIGV
Trigger: CACACCGATCGCCCGCCGCCATGGGCTCCTCGCAAA...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR CCA 90 bp ATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTTTGCGAGGAGCCCATaGCGGCGGGCGATCGGTGTG +
Preference number: 4 (lower is better)
Translates to: IFTGFSTFAFSRSLRVSLFARSP*RRAIGV
Trigger: CACACCGATCGCCCGCCGCCATGGGCTCCTCGCAAA...CAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR CCA 90 bp CCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATGTTTTGTTAACTGAGGACAGCTaGACCTCTGTAAACCCATCT +
Preference number: 4 (lower is better)
Translates to: PPHRLLGVTEVSRSSNVLLTEDS*TSVNPS
Trigger: AGATGGGTTTACAGAGGTCCAGCTGTCCTCAGTTAA...CAAAACATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp ATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGCGGAGGGTGCGTTGCTaGTGGGCGGGAGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: IFTGFSTFAFSRSLRVSLRRVRC*WAGGKT
Trigger: TGTCTTCCCTCCCGCCCACCAGCAACGCACCCTCCG...CAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp GTGCCACCTTCTGGTTTAAAACTGTGGCACCTTATTTCTTTTGAAATGTCACTTTGTCCTCAACGGTGGTaGGGGCCTTGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VPPSGLKLWHLISFEMSLCPQRW*GPWQWG
Trigger: CCCCCACTGCCAAGGCCCCCACCACCGTTGAGGACA...AAGTGACATTTCAAAAGAAATAAGGTGCCACAGTTTTAAACCAGAAGGTGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp ATCACTTCTCGACAGTTATCAGTGTCTGTGTTGTACACATACAGTTTCAATGGTTGTCCTCAACGGTGGTaGGGGCCTTGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ITSRQLSVSVLYTYSFNGCPQRW*GPWQWG
Trigger: CCCCCACTGCCAAGGCCCCCACCACCGTTGAGGACA...ACCATTGAAACTGTATGTGTACAACACAGACACTGATAACTGTCGAGAAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp TTTCCAGACACGCTCCCGTGGTTAAATATACCACGCCAATTCCAAAGAATGGTTGAGCCCCACTCAACCTaGCAGGATACAACCCACGTC +
Preference number: 4 (lower is better)
Translates to: FPDTLPWLNIPRQFQRMVEPHST*QDTTHV
Trigger: GACGTGGGTTGTATCCTGCCAGGTTGAGTGGGGCTC...AACCATTCTTTGGAATTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp TTTCCAGACACGCTCCCGTGGTTAAATATACCACGCCAATTCCAAAGAATGGTTACGGCAGTGCAAGCCTaGCAGCAAGCCACCCTTACA +
Preference number: 4 (lower is better)
Translates to: FPDTLPWLNIPRQFQRMVTAVQA*QQATLT
Trigger: TGTAAGGGTGGCTTGCTGCCAGGCTTGCACTGCCGT...AACCATTCTTTGGAATTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp TGTGTTTCGATAAGGCTGAATAGATCTTCAGACTCATTCATGACTGTATCTGCTGTAGCACTTGGGACGTaGCACTCGCTGCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: CVSIRLNRSSDSFMTVSAVALGT*HSLPPE
Trigger: CTCCGGCGGCAGCGAGTGCCACGTCCCAAGTGCTAC...AGCAGATACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444801.5
CDS-3UTR CCA 90 bp CATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTCCTCCGCGTAGCACTTaGGACGTGGCACTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLYRLFNVCFQQILKSVIPPRST*DVALAA
Trigger: GGCAGCGAGTGCCACGTCCCAAGTGCTACGCGGAGG...AATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444801.5
CDS-3UTR CCA 90 bp AGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCACGTCTCCTGCCCTGCTaGTCTTTCAGGCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: SIFTGFSTFAFSRSLRVSRLLPC*SFRPLG
Trigger: GCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACG...TGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR TCA 90 bp GGATTCATTGGTGGCACAGAAGTGAGGGACTGGTTTACTTGTGGTGGCAATAACTTGGTGGCACAGAAGTaGGGGACTGGTTTACTTGTG +
Preference number: 4 (lower is better)
Translates to: GFIGGTEVRDWFTCGGNNLVAQK*GTGLLV
Trigger: CACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAA...GTTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAATGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR TCA 90 bp TCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTATGGAACCAAGGGGAATaGCGGGAGGAACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: SLYRLQFSEVVCILANDLWNQGE*REELGW
Trigger: CCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCA...TAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp AGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCAAAACAGGCTTCTCGCTaGCTGGGGTGGAGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: SIFTGFSTFAFSRSLRVSKQASR*LGWSRR
Trigger: TCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGTTT...TGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp ACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCGGGATCTCGACGCTTTaGGAGGAGCCCATGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TKSKNLFTVYSLVRWSAFGISTL*EEPMAA
Trigger: CGCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCC...GAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp TCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTATGCCACATCCTAGGCTaGCTTCTCCACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SLYRLQFSEVVCILANDLCHILG*LLHPMQ
Trigger: CTGCATGGGGTGGAGAAGGCAGCCTAGGATGTGGCA...TAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp CTTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTTGGCATGATGTGTGGTaGTGGGAGGTTGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LSQYSYNTTRSHRVPPSGWHDVW*WEVEVE
Trigger: CTCAACCTCAACCTCCCAGCACCACACATCATGCCA...ACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp TCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTAGGCAGCGTCTGCCTTTaGAGTAGTTGTGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SLYRLQFSEVVCILANDLGSVCL*SSCGRV
Trigger: GACCCTGCCACAACTACTGCAAAGGCAGACGCTGCC...TAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp TTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTTCCCTGGCATGATGTGTaGTGCTGGGAGGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FPSIAIILQGATECHLLVPWHDV*CWEVEV
Trigger: AACCTCAACCTCCCAGCACCACACATCATGCCAGGG...AACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGAAGGCTTCTCGCTGACTaGGGTGGAGTCGCCGACTCT +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRRLLAD*GGVADS
Trigger: AGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCT...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp AGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGATGGAGCCCCACTCAACCTaGCAGGATACAACCCACGTC +
Preference number: 4 (lower is better)
Translates to: RIQPTSSFSFPLGIIYRMEPHST*QDTTHV
Trigger: GACGTGGGTTGTATCCTGCCAGGTTGAGTGGGGCTC...CATCCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp ACAGAAGTGAGGGACTGGTTTACTTGTGGTGGCAATAACGGTACTGTTGGTACAGTTACTTGGTGTGACTaGGGTCTCTCGCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: TEVRDWFTCGGNNGTVGTVTWCD*GLSQFQ
Trigger: TTGGAACTGCGAGAGACCTCAGTCACACCAAGTAAC...TGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR TCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGACACATCCACAGTGAGTaGGGAGGCAGCGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRHIHSE*GGSVCL
Trigger: AAGGCAGACGCTGCCTCCTCACTCACTGTGGATGTG...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp CCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATGTTTTGAGGCTTTTCAACGTTTaGTTTCAGCAGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: PPHRLLGVTEVSRSSNVLRLFNV*FQQILK
Trigger: CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCT...CAAAACATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp CGACTCACGGAGACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGCACCTTTCCCGAAGATaGACACCCCCAGGAACGGCA +
Preference number: 4 (lower is better)
Translates to: RLTETKSKNLFTVYSLVRHLSRR*TPPGTA
Trigger: TGCCGTTCCTGGGGGTGTGCATCTTCGGGAAAGGTG...CCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGTCTCCGTGAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp GGCAGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGACCAGCTCTGTGTCCTaGGGAATTTTCTTGTACCCG +
Preference number: 4 (lower is better)
Translates to: GRIQPTSSFSFPLGIIYRTSSVS*GIFLYP
Trigger: CGGGTACAAGAAAATTCCCCAGGACACAGAGCTGGT...CCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp CTTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTAGCTGGATTCATTGGTaGCACAGAAGTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: LSQYSYNTTRSHRVPPSGSWIHW*HRSEGL
Trigger: CAGTCCCTCACTTCTGTGCCACCAATGAATCCAGCT...ACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp ACAGAAGTGAGGGACTGGTTTACTTGTGGTGGCAATAACGGTACTGTTGGTACAAGCTGGATTCATTGGTaGCACAGAAGTGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: TEVRDWFTCGGNNGTVGTSWIHW*HRSEGL
Trigger: CAGTCCCTCACTTCTGTGCCACCAATGAATCCAGCT...TGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp CTTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTCATGATGTGTGGTGCTaGGAGGTTGAGGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LSQYSYNTTRSHRVPPSGHDVWC*EVEVEV
Trigger: AACCTCAACCTCAACCTCCCAGCACCACACATCATG...ACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp ACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCAGGGTGCGTTGCTGGTaGGCGGGAGGGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: TKSKNLFTVYSLVRWSAFRVRCW*AGGKTA
Trigger: TGCTGTCTTCCCTCCCGCCCACCAGCAACGCACCCT...GAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp TTAACACAAGTCTTCAGGTGGAATTCCTGTGTAAACCTTAGTAGAGATGCGACTAGACGGGGGATTAACTaGGGACAGCTGGACCTCTGT +
Preference number: 4 (lower is better)
Translates to: LTQVFRWNSCVNLSRDATRRGIN*GQLDLC
Trigger: ACAGAGGTCCAGCTGTCCTCAGTTAATCCCCCGTCT...AGTCGCATCTCTACTAAGGTTTACACAGGAATTCCACCTGAAGACTTGTGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR TCA 90 bp TTTCCAGACACGCTCCCGTGGTTAAATATACCACGCCAATTCCAAAGAATGGTTTTGGTGGCACAGAAGTaGGGGACTGGTTTACTTGTG +
Preference number: 4 (lower is better)
Translates to: FPDTLPWLNIPRQFQRMVLVAQK*GTGLLV
Trigger: CACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAA...AACCATTCTTTGGAATTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGCACATCCACAGTGAGTaGGGAGGCAGCGTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVHIHSE*GGSVCL
Trigger: AAGGCAGACGCTGCCTCCTCACTCACTGTGGATGTG...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR TCA 90 bp ATAGATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGGCGTCACATCCACAGTaGGTGAGGAGGCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: IDKHLYRLFNVCFQQILKASHPQ*VRRQRL
Trigger: CAGACGCTGCCTCCTCACTCACTGTGGATGTGACGC...CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp GGCAGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGAGCTGCAGAAACGAATaGTCACTCCCAATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GRIQPTSSFSFPLGIIYRSCRNE*SLPISP
Trigger: AGGGCTTATTGGGAGTGAGCATTCGTTTCTGCAGCT...CCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp TGTGTTTCGATAAGGCTGAATAGATCTTCAGACTCATTCATGACTGTATCTGCTTGCCACATCCTAGGCTaGCTTCTCCACCCCATGCAG +
Preference number: 4 (lower is better)
Translates to: CVSIRLNRSSDSFMTVSACHILG*LLHPMQ
Trigger: CTGCATGGGGTGGAGAAGGCAGCCTAGGATGTGGCA...AGCAGATACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGGGGGAGAGGTGCAATaGCAGGTAAGTTTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSGGEVQ*QVSFGE
Trigger: CTCCCCGAAACTTACCTGGCATTGCACCTCTCCCCC...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp GTTTTCCCCTTGGAATTATTTACAGGATGCCTACAGATACGGTACAAACTAGTACACCTTTCCCGAAGATaGACACCCCCAGGAACGGCA +
Preference number: 4 (lower is better)
Translates to: VFPLELFTGCLQIRYKLVHLSRR*TPPGTA
Trigger: TGCCGTTCCTGGGGGTGTGCATCTTCGGGAAAGGTG...TACTAGTTTGTACCGTATCTGTAGGCATCCTGTAAATAATTCCAAGGGGAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTTTCCGTCTCCTGCCCTaGTGGTCTTTCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSFRLLP*WSFRPL
Trigger: GAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAA...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp CATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTCCACTTTGGAGACGTTaGCTCCGCGCCCTTCCTAAC +
Preference number: 4 (lower is better)
Translates to: HLYRLFNVCFQQILKSVIPLWRR*LRALPN
Trigger: GTTAGGAAGGGCGCGGAGGCAACGTCTCCAAAGTGG...AATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454751.5
CDS-3UTR CCA 90 bp TTACAGGTGCACACCATTATGCCCGGCTTAAGCTTCCTTATTTCTGACAATGTGCATGATGTGTGGTGCTaGGAGGTTGAGGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LQVHTIMPGLSFLISDNVHDVWC*EVEVEV
Trigger: AACCTCAACCTCAACCTCCCAGCACCACACATCATG...CACATTGTCAGAAATAAGGAAGCTTAAGCCGGGCATAATGGTGTGCACCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGACCCTGGCATGATGTGTaGTGCTGGGAGGTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRPWHDV*CWEVEV
Trigger: AACCTCAACCTCCCAGCACCACACATCATGCCAGGG...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp CTGAGTGATTCTGAGAGCTCAAAACAAGGATCCGCGTATAGGCTGAAGAAAAAGGTGACTCAGAAGCATTaGCATCCACAGCCGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSDSESSKQGSAYRLKKKVTQKH*HPQPQK
Trigger: TTTCTGCGGCTGTGGATGCCAATGCTTCTGAGTCAC...CTTTTTCTTCAGCCTATACGCGGATCCTTGTTTTGAGCTCTCAGAATCACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp TTTCCAGACACGCTCCCGTGGTTAAATATACCACGCCAATTCCAAAGAATGGTTCCAGACACGCTCCCGTaGTTAAATATACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: FPDTLPWLNIPRQFQRMVPDTLP*LNIPRQ
Trigger: TTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGG...AACCATTCTTTGGAATTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp CATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTAGACGGGGGATTAACTaGGGACAGCTGGACCTCTGT +
Preference number: 4 (lower is better)
Translates to: HLYRLFNVCFQQILKSVIRRGIN*GQLDLC
Trigger: ACAGAGGTCCAGCTGTCCTCAGTTAATCCCCCGTCT...AATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR TCA 90 bp TGTCTGAGTGATTCTGAGAGCTCAAAACAAGGATCCGCGTATAGGCTGAAGAAAAATACAAGCGCTTTCTaGCATCTCACCCTAGCGTGT +
Preference number: 4 (lower is better)
Translates to: CLSDSESSKQGSAYRLKKNTSAF*HLTLAC
Trigger: ACACGCTAGGGTGAGATGTCAGAAAGCGCTTGTATT...TTTCTTCAGCCTATACGCGGATCCTTGTTTTGAGCTCTCAGAATCACTCAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp ATAGATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGTTCCGTCTCCTGCCCTaGTGGTCTTTCAGGCCACTC +
Preference number: 4 (lower is better)
Translates to: IDKHLYRLFNVCFQQILKFRLLP*WSFRPL
Trigger: GAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAA...CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp ATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTGGTTTTCCGTCTCCTaGCCTGCTGGTCTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: IFTGFSTFAFSRSLRVSLWFSVS*PAGLSG
Trigger: GCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCA...CAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR CCA 90 bp GTTTTCCCCTTGGAATTATTTACAGGATGCCTACAGATACGGTACAAACTAGTAAGTTTCGGGGAGGCATaGAAGGAAGAGGTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: VFPLELFTGCLQIRYKLVSFGEA*KEEVAD
Trigger: GTCTGCCACCTCTTCCTTCCATGCCTCCCCGAAACT...TACTAGTTTGTACCGTATCTGTAGGCATCCTGTAAATAATTCCAAGGGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp CGACTCACGGAGACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGACAGGTTACTTGGTGTaGCTGAGGTCTCTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: RLTETKSKNLFTVYSLVRTGYLV*LRSLAV
Trigger: AACTGCGAGAGACCTCAGTCACACCAAGTAACCTGT...CCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGTCTCCGTGAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp AGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCAACAGGTTACTTGGTGTaGCTGAGGTCTCTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: SIFTGFSTFAFSRSLRVSTGYLV*LRSLAV
Trigger: AACTGCGAGAGACCTCAGTCACACCAAGTAACCTGT...TGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR TCA 90 bp TTAACACAAGTCTTCAGGTGGAATTCCTGTGTAAACCTTAGTAGAGATGCGACTTGCTGCAGGAGAATTTaGTTCCACCTCCAGCACATG +
Preference number: 4 (lower is better)
Translates to: LTQVFRWNSCVNLSRDATCCRRI*FHLQHM
Trigger: CATGTGCTGGAGGTGGAATCAAATTCTCCTGCAGCA...AGTCGCATCTCTACTAAGGTTTACACAGGAATTCCACCTGAAGACTTGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR TCA 90 bp CTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTCTGCTGCAGGAGAATTTaGTTCCACCTCCAGCACATG +
Preference number: 4 (lower is better)
Translates to: LYRLFNVCFQQILKSVIVCCRRI*FHLQHM
Trigger: CATGTGCTGGAGGTGGAATCAAATTCTCCTGCAGCA...GACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442798.5
ENST00000444801.5
CDS-3UTR TCA 90 bp CGACTCACGGAGACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGTAGTTCCTGGTGGTaGCAAAGACGGGGGATTAAC +
Preference number: 4 (lower is better)
Translates to: RLTETKSKNLFTVYSLVRCSSWW*QRRGIN
Trigger: GTTAATCCCCCGTCTTTGTCACCACCAGGAACTACA...CCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGTCTCCGTGAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp CTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTCTGTAGTTCCTGGTGGTaGCAAAGACGGGGGATTAAC +
Preference number: 4 (lower is better)
Translates to: LYRLFNVCFQQILKSVIVCSSWW*QRRGIN
Trigger: GTTAATCCCCCGTCTTTGTCACCACCAGGAACTACA...GACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp TTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTTTCCACCTCCAGCACATaGCAAACATTTTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: FPSIAIILQGATECHLLVSTSST*QTFSFA
Trigger: GGCAAATGAAAATGTTTGGCATGTGCTGGAGGTGGA...AACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp TGTCTGAGTGATTCTGAGAGCTCAAAACAAGGATCCGCGTATAGGCTGAAGAAATTAACTGAGGACAGCTaGACCTCTGTAAACCCATCT +
Preference number: 4 (lower is better)
Translates to: CLSDSESSKQGSAYRLKKLTEDS*TSVNPS
Trigger: AGATGGGTTTACAGAGGTCCAGCTGTCCTCAGTTAA...TTTCTTCAGCCTATACGCGGATCCTTGTTTTGAGCTCTCAGAATCACTCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGACCAGACACGCTCCCGTaGTTAAATATACCACGCCAA +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRPDTLP*LNIPRQ
Trigger: TTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGG...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp CTGAGTGATTCTGAGAGCTCAAAACAAGGATCCGCGTATAGGCTGAAGAAAAAGTACAGTTTAGTGAGGTaGTCTGCATTCTCGCAAACG +
Preference number: 4 (lower is better)
Translates to: LSDSESSKQGSAYRLKKKYSLVR*SAFSQT
Trigger: CGTTTGCGAGAATGCAGACCACCTCACTAAACTGTA...CTTTTTCTTCAGCCTATACGCGGATCCTTGTTTTGAGCTCTCAGAATCACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp TTTCCAGACACGCTCCCGTGGTTAAATATACCACGCCAATTCCAAAGAATGGTTTACAGTTTAGTGAGGTaGTCTGCATTCTCGCAAACG +
Preference number: 4 (lower is better)
Translates to: FPDTLPWLNIPRQFQRMVYSLVR*SAFSQT
Trigger: CGTTTGCGAGAATGCAGACCACCTCACTAAACTGTA...AACCATTCTTTGGAATTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp GTTTTCCCCTTGGAATTATTTACAGGATGCCTACAGATACGGTACAAACTAGTAGTTACTTGGTGTGACTaGGGTCTCTCGCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: VFPLELFTGCLQIRYKLVVTWCD*GLSQFQ
Trigger: TTGGAACTGCGAGAGACCTCAGTCACACCAAGTAAC...TACTAGTTTGTACCGTATCTGTAGGCATCCTGTAAATAATTCCAAGGGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGGTTACTTGGTGTGACTaGGGTCTCTCGCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVVTWCD*GLSQFQ
Trigger: TTGGAACTGCGAGAGACCTCAGTCACACCAAGTAAC...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR TCA 90 bp ATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGGTTACTTGGTGTGACTaGGGTCTCTCGCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: IFTGFSTFAFSRSLRVSLVTWCD*GLSQFQ
Trigger: TTGGAACTGCGAGAGACCTCAGTCACACCAAGTAAC...CAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR TCA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGACAGGTTACTTGGTGTaGCTGAGGTCTCTCGCAGTT +
Preference number: 4 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVTGYLV*LRSLAV
Trigger: AACTGCGAGAGACCTCAGTCACACCAAGTAACCTGT...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR TCA 90 bp GTTTTCCCCTTGGAATTATTTACAGGATGCCTACAGATACGGTACAAACTAGTATGCTGCAGGAGAATTTaGTTCCACCTCCAGCACATG +
Preference number: 4 (lower is better)
Translates to: VFPLELFTGCLQIRYKLVCCRRI*FHLQHM
Trigger: CATGTGCTGGAGGTGGAATCAAATTCTCCTGCAGCA...TACTAGTTTGTACCGTATCTGTAGGCATCCTGTAAATAATTCCAAGGGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp AGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGCCCCATCAAAGCTaGAGAAACGAATGCTCACTC +
Preference number: 4 (lower is better)
Translates to: SIFTGFSTFAFSRSLRVSLPHQS*RNECSL
Trigger: GAGTGAGCATTCGTTTCTGCAGCTTTGATGGGGCAA...TGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
CDS-3UTR GCA 90 bp AGTTTCAATGGTTTTGCTTCATGTGTTTCGATAAGGCTGAATAGATCTTCAGACTGGCATGATGTGTGGTaGTGGGAGGTTGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SFNGFASCVSIRLNRSSDWHDVW*WEVEVE
Trigger: CTCAACCTCAACCTCCCAGCACCACACATCATGCCA...GTCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGCAAAACCATTGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGAAGTAGCTGGATTCATTaGTGGCACAGAAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRSSWIH*WHRSEG
Trigger: TCCCTCACTTCTGTGCCACCAATGAATCCAGCTACT...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp ATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTACTTCCAGGCCATTTaGTTTTCCGTCTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IFTGFSTFAFSRSLRVSLYFQAI*FSVSCP
Trigger: AGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTA...CAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR TCA 90 bp GTTTTCCCCTTGGAATTATTTACAGGATGCCTACAGATACGGTACAAACTAGTAGACAGCTGGTGGAGTTaGGCTAATAGAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VFPLELFTGCLQIRYKLVDSWWS*ANRKSS
Trigger: ACTGGACTTTCTATTAGCTCAACTCCACCAGCTGTC...TACTAGTTTGTACCGTATCTGTAGGCATCCTGTAAATAATTCCAAGGGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR TCA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGGACAGCTGGTGGAGTTaGGCTAATAGAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVDSWWS*ANRKSS
Trigger: ACTGGACTTTCTATTAGCTCAACTCCACCAGCTGTC...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR TCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGAGATCCGCGTATAGGCTaGAGAAAAAGACGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRDPRIG*RKRRSV
Trigger: AACTGAACGTCTTTTTCTTCAGCCTATACGCGGATC...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp TTTCCAGACACGCTCCCGTGGTTAAATATACCACGCCAATTCCAAAGAATGGTTAGGCTTTTCAACGTTTaGTTTCAGCAGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: FPDTLPWLNIPRQFQRMVRLFNV*FQQILK
Trigger: CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCT...AACCATTCTTTGGAATTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTAGCTGCAGAAACGAATaGTCACTCCCAATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSSCRNE*SLPISP
Trigger: AGGGCTTATTGGGAGTGAGCATTCGTTTCTGCAGCT...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp TTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTCTAGCTGCAGAAACGAATaGTCACTCCCAATAAGCCCT +
Preference number: 4 (lower is better)
Translates to: FTGFSTFAFSRSLRVSLSSCRNE*SLPISP
Trigger: AGGGCTTATTGGGAGTGAGCATTCGTTTCTGCAGCT...AGACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp ATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTTGCCCCATCAAAGCTaGAGAAACGAATGCTCACTC +
Preference number: 4 (lower is better)
Translates to: IFTGFSTFAFSRSLRVSLLPHQS*RNECSL
Trigger: GAGTGAGCATTCGTTTCTGCAGCTTTGATGGGGCAA...CAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
CDS-3UTR GCA 90 bp TTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTTCCAAACATTTTCATTTaGCCCATCAAAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FPSIAIILQGATECHLLVPNIFI*PIKAAE
Trigger: TTCTGCAGCTTTGATGGGGCAAATGAAAATGTTTGG...AACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGATCCACCTCCAGCACATaGCAAACATTTTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRSTSST*QTFSFA
Trigger: GGCAAATGAAAATGTTTGGCATGTGCTGGAGGTGGA...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp AAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTTAGTGAGGTGGTCTaGATTCTCGCAAACGACTTA +
Preference number: 4 (lower is better)
Translates to: KSLYRLQFSEVVCILANDFSEVV*ILANDL
Trigger: TAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAA...GTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp AGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGATGTATATAATCACTGTGTaGTCTAAGACCTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: RIQPTSSFSFPLGIIYRMYIITV*SKTCQC
Trigger: GCACTGGCAGGTCTTAGACCACACAGTGATTATATA...CATCCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGACTTTCCTTCCTCAAATaGGCGTGTAGGTATTCGATG +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRLSFLK*ACRYSM
Trigger: CATCGAATACCTACACGCCCATTTGAGGAAGGAAAG...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp CTGAGTGATTCTGAGAGCTCAAAACAAGGATCCGCGTATAGGCTGAAGAAAAAGACCAGCCATTTGTCCTaGAAGAGAAATTTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSDSESSKQGSAYRLKKKTSHLS*KRNFLS
Trigger: GGAAAGAAAATTTCTCTTCCAGGACAAATGGCTGGT...CTTTTTCTTCAGCCTATACGCGGATCCTTGTTTTGAGCTCTCAGAATCACTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp GGCAGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGAGATGCGTGACATACTaGAGAGTAATAAGACATACT +
Preference number: 4 (lower is better)
Translates to: GRIQPTSSFSFPLGIIYRRCVTY*RVIRHT
Trigger: AGTATGTCTTATTACTCTCCAGTATGTCACGCATCT...CCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CCA 90 bp CTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTCACCAGCTCTGTGTCCTaGGGAATTTTCTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: LYRLFNVCFQQILKSVIVTSSVS*GIFLYF
Trigger: GAAGTACAAGAAAATTCCCCAGGACACAGAGCTGGT...GACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR TCA 90 bp ATAGATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAATACAAGCGCTTTCTaGCATCTCACCCTAGCGTGT +
Preference number: 4 (lower is better)
Translates to: IDKHLYRLFNVCFQQILKNTSAF*HLTLAC
Trigger: ACACGCTAGGGTGAGATGTCAGAAAGCGCTTGTATT...CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR GCA 90 bp TCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACCAAACATTTTCATTTaGCCCATCAAAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SLYRLQFSEVVCILANDLPNIFI*PIKAAE
Trigger: TTCTGCAGCTTTGATGGGGCAAATGAAAATGTTTGG...TAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGAAATAACCATATCCAATaGCACATCCTAGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LQFSEVVCILANDLQSTRNNHIQ*HILGCL
Trigger: AAGGCAGCCTAGGATGTGGCATTGGATATGGTTATT...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp CGACTCACGGAGACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGAATAACCATATCCAATaGCACATCCTAGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RLTETKSKNLFTVYSLVRNNHIQ*HILGCL
Trigger: AAGGCAGCCTAGGATGTGGCATTGGATATGGTTATT...CCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGTCTCCGTGAGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp CGACTCACGGAGACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTTTAGTGAGGTGGTCTaGATTCTCGCAAACGACTTA +
Preference number: 4 (lower is better)
Translates to: RLTETKSKNLFTVYSLVRFSEVV*ILANDL
Trigger: TAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAA...CCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGTCTCCGTGAGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGACCAGCTCTGTGTCCTaGGGAATTTTCTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVTSSVS*GIFLYF
Trigger: GAAGTACAAGAAAATTCCCCAGGACACAGAGCTGGT...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR TCA 90 bp TCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTATTACAAAATGTTGTCTaGGTGATTCTGAGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SLYRLQFSEVVCILANDLLQNVV*VILRAQ
Trigger: TTGAGCTCTCAGAATCACTCAGACAACATTTTGTAA...TAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp ATAGATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGTCCACCTCCAGCACATaGCAAACATTTTCATTTGCC +
Preference number: 4 (lower is better)
Translates to: IDKHLYRLFNVCFQQILKSTSST*QTFSFA
Trigger: GGCAAATGAAAATGTTTGGCATGTGCTGGAGGTGGA...CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442798.5
ENST00000444801.5
CDS-3UTR CCA 90 bp CATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTTATATAATCACTGTGTaGTCTAAGACCTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: HLYRLFNVCFQQILKSVIYIITV*SKTCQC
Trigger: GCACTGGCAGGTCTTAGACCACACAGTGATTATATA...AATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442798.5
ENST00000444801.5
CDS-3UTR CCA 90 bp TGTGTTTCGATAAGGCTGAATAGATCTTCAGACTCATTCATGACTGTATCTGCTTATATAATCACTGTGTaGTCTAAGACCTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: CVSIRLNRSSDSFMTVSAYIITV*SKTCQC
Trigger: GCACTGGCAGGTCTTAGACCACACAGTGATTATATA...AGCAGATACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442798.5
ENST00000444801.5
CDS-3UTR CCA 90 bp TCATGTGTTTCGATAAGGCTGAATAGATCTTCAGACTCATTCATGACTGTATCTCTTTCCTTCCTCAAATaGGCGTGTAGGTATTCGATG +
Preference number: 4 (lower is better)
Translates to: SCVSIRLNRSSDSFMTVSLSFLK*ACRYSM
Trigger: CATCGAATACCTACACGCCCATTTGAGGAAGGAAAG...AGATACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CCA 90 bp ACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCACAGAAGTGAGGGACTaGTTTACTTGTGGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TKSKNLFTVYSLVRWSAFTEVRD*FTCGGN
Trigger: ATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGT...GAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CCA 90 bp TTAACACAAGTCTTCAGGTGGAATTCCTGTGTAAACCTTAGTAGAGATGCGACTACACAAGTCTTCAGGTaGAATTCCTGTGTAAACCTT +
Preference number: 4 (lower is better)
Translates to: LTQVFRWNSCVNLSRDATTQVFR*NSCVNL
Trigger: AAGGTTTACACAGGAATTCCACCTGAAGACTTGTGT...AGTCGCATCTCTACTAAGGTTTACACAGGAATTCCACCTGAAGACTTGTGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR GCA 90 bp TTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTCTAGGCTTTTCAACGTTTaGTTTCAGCAGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: FTGFSTFAFSRSLRVSLSRLFNV*FQQILK
Trigger: CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCT...AGACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTAGGCTTTTCAACGTTTaGTTTCAGCAGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSRLFNV*FQQILK
Trigger: CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCT...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGAGGCTTTTCAACGTTTaGTTTCAGCAGATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVRLFNV*FQQILK
Trigger: CTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCT...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR GCA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTCCAAACATTTTCATTTaGCCCATCAAAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSPNIFI*PIKAAE
Trigger: TTCTGCAGCTTTGATGGGGCAAATGAAAATGTTTGG...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
CDS-3UTR GCA 90 bp TTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTCTCCAAACATTTTCATTTaGCCCATCAAAGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FTGFSTFAFSRSLRVSLSPNIFI*PIKAAE
Trigger: TTCTGCAGCTTTGATGGGGCAAATGAAAATGTTTGG...AGACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
CDS-3UTR GCA 90 bp AAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACGAATTATTTACAGGATaGCTACAGATACGGTACAAA +
Preference number: 4 (lower is better)
Translates to: KSLYRLQFSEVVCILANDELFTG*LQIRYK
Trigger: TTTGTACCGTATCTGTAGGCATCCTGTAAATAATTC...GTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR GCA 90 bp GCTTCATGTGTTTCGATAAGGCTGAATAGATCTTCAGACTCATTCATGACTGTATTATTTCTGACAATGTaGTTGAGCCTTCTCTCATTG +
Preference number: 4 (lower is better)
Translates to: ASCVSIRLNRSSDSFMTVLFLTM*LSLLSL
Trigger: CAATGAGAGAAGGCTCAAGCACATTGTCAGAAATAA...TACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACATGAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442798.5
3UTR CAA 72 bp GTAATAATCACTTCTCGACAGTTATCAGTGTCTGTGTaGTACACATACAGTTTCAATGGTTTTGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: VIITSRQLSVSV*YTYSFNGFASC
Trigger: ACATGAAGCAAAACCATTGAAACTGTATGTGTACAACACAGACACTGATAACTGTCGAGAAGTGATTATTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS GCA 90 bp AGGCAGCGCCCGCGACCGCCGCTCCTTCGCGGGATCGGGCCTGGCTaGCCCGTGAAGGAGCCCATGGGGGCCTCCGCCTCCCCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: RQRPRPPLLRGIGPG*PVKEPMGASASPRP
Trigger: CGGCCGCGGGGAGGCGGAGGCCCCCATGGGCTCCTTCACGGGGCAGCCAGGCCCGATCCCGCGAAGGAGCGGCGGTCGCGGGCGCTGCCT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497928.1
CDS GCA 90 bp GCCCATGGCGGCGGGCGATCGGTGTGGCCGAGCCGGGCTCCGCGCTaGTCCCGCCCCCAGCGCACCGCCTGCTCTAATCCTCCGCGTAGC +
Preference number: 5 (lower is better)
Translates to: AHGGGRSVWPSRAPR*SRPQRTACSNPPRS
Trigger: GCTACGCGGAGGATTAGAGCAGGCGGTGCGCTGGGGGCGGGAGCAGCGCGGAGCCCGGCTCGGCCACACCGATCGCCCGCCGCCATGGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000234160.5
ENST00000444801.5
ENST00000455067.5
ENST00000493692.5
ENST00000497674.5
CDS GCA 90 bp CTACAGCCGCGGACCCCGTGCCCAGGGCGCTCCGCGGAGGTGGGATaGGAGCGGCCTCCGGAACCAGCCTCGACCAAGGCAGCGCCCGCG +
Preference number: 5 (lower is better)
Translates to: LQPRTPCPGRSAEVG*ERPPEPASTKAAPA
Trigger: CGCGGGCGCTGCCTTGGTCGAGGCTGGTTCCGGAGGCCGCTCGCATCCCACCTCCGCGGAGCGCCCTGGGCACGGGGTCCGCGGCTGTAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497928.1
CDS CCA 90 bp CCTCGGTGCCCCCGCCCGGGATCTCGACGCTTTGCGAGGAGCCCATaGCGGCGGGCGATCGGTGTGGCCGAGCCGGGCTCCGCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PRCPRPGSRRFARSP*RRAIGVAEPGSALL
Trigger: GAGCAGCGCGGAGCCCGGCTCGGCCACACCGATCGCCCGCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000234160.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
ENST00000493692.5
ENST00000497674.5
CDS GCA 90 bp AGCCGCCTCCAGCTCCAGCCCGTCCTCCTACAGCCGCGGACCCCGTaGCCAGGGCGCTCCGCGGAGGTGGGATGCGAGCGGCCTCCGGAA +
Preference number: 5 (lower is better)
Translates to: SRLQLQPVLLQPRTP*PGRSAEVGCERPPE
Trigger: TTCCGGAGGCCGCTCGCATCCCACCTCCGCGGAGCGCCCTGGGCACGGGGTCCGCGGCTGTAGGAGGACGGGCTGGAGCTGGAGGCGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497928.1
CDS GCA 90 bp ACTGCGGGTCCGGATCCCTCTCCCGCAGAACGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGACGCTTTGCGAGGAGCCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: TAGPDPSPAERGSPR*PRPGSRRFARSPWR
Trigger: CCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACGTTCTGCGGGAGAGGGATCCGGACCCGCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS TCA 90 bp TCTCCTGCCCTGCTGGTCTTTCAGGCCACTCGGCCGGCGCCGAGGTaGTTTAACACCTGCCGCCGCAGGCCCCGCCTCCGGACTGCGGGT +
Preference number: 5 (lower is better)
Translates to: SPALLVFQATRPAPR*FNTCRRRPRLRTAG
Trigger: ACCCGCAGTCCGGAGGCGGGGCCTGCGGCGGCAGGTGTTAAATCACCTCGGCGCCGGCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454751.5
ENST00000455067.5
ENST00000497928.1
CDS GCA 90 bp GCGCCCTTCCTAACTTTGGAAGCCGCAGAACGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGACGCTTTGCGAGGAGCCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: APFLTLEAAERGSPR*PRPGSRRFARSPWR
Trigger: CCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACGTTCTGCGGCTTCCAAAGTTAGGAAGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454751.5
CDS GCA 90 bp CTTGAGCCTTCTCTCATTGATGCCGCAGAACGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGACGCTTTGCGAGGAGCCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: LEPSLIDAAERGSPR*PRPGSRRFARSPWR
Trigger: CCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACGTTCTGCGGCATCAATGAGAGAAGGCTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS GCA 90 bp TCCGGACTGCGGGTCCGGATCCCTCTCCTAGGAAAGCGCAAAGGCTaGCTTCACAGTCACCACTTTGGAGACGTTGCCTCCGCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: SGLRVRIPLLGKRKG*LHSHHFGDVASAPF
Trigger: GAAGGGCGCGGAGGCAACGTCTCCAAAGTGGTGACTGTGAAGGCAGCCTTTGCGCTTTCCTAGGAGAGGGATCCGGACCCGCAGTCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000497928.1
CDS-3UTR CAA 90 bp TACTTCCAGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTGGTCTTTCAGGCCACCGGGATCTCGACGCTTaGCGAGGAGCCCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: YFQAIWFSVSCPAGLSGHRDLDA*RGAHGG
Trigger: GCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCG...GTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS-3UTR CAA 90 bp GGAAACCTAGTGGACGCCCCGCCACCACCTTTCCCGAAGATGCACACCCCCAGGTTGAGGTTGGGGAGGTaGGGCAGTCCTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: GNLVDAPPPPFPKMHTPRLRLGR*GSPAGK
Trigger: TTTACCAGCAGGACTGCCCAACCTCCCCAACCTCAA...CCTGGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGGGGCGTCCACTAGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CAA 90 bp ACAGGCTTCTCGCTGACTGGGGTGGAGTCGCCGACTCTGTCCTCAACGGTGGTGAGGTTGAGGTTGAGGTaGGGGAGGTTGGGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: TGFSLTGVESPTLSSTVVRLRLR*GRLGSP
Trigger: AGGACTGCCCAACCTCCCCAACCTCAACCTCAACCT...CACCACCGTTGAGGACAGAGTCGGCGACTCCACCCCAGTCAGCGAGAAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS CCA 90 bp CCCTCTCCTAGGAAAGCGCAAAGGCTGCCTTCACAGTCACCACTTTaGAGACGTTGCCTCCGCGCCCTTCCTAACTTTGGAAGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PSPRKAQRLPSQSPL*RRCLRALPNFGSRR
Trigger: TCTGCGGCTTCCAAAGTTAGGAAGGGCGCGGAGGCAACGTCTCCAAAGTGGTGACTGTGAAGGCAGCCTTTGCGCTTTCCTAGGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454751.5
CDS CCA 90 bp TTTCTTGTACTTCCAGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTaGTCTTTCAGGCCACTCGGCCGGCGCCGAGGTGATTTAACACCT +
Preference number: 5 (lower is better)
Translates to: FLVLPGHLVFRLLPC*SFRPLGRRRGDLTP
Trigger: AGGTGTTAAATCACCTCGGCGCCGGCCGAGTGGCCTGAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTACAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454751.5
ENST00000455067.5
ENST00000497928.1
CDS CCA 90 bp GTAGGATTGTCAATCAGAGTGTCTGCCCTGCCCAAACCAAGGGAATaGCTCATGGTCAAAGCCAGGCCAATTTCTCTTGCCCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: VGLSIRVSALPKPRE*LMVKARPISLAHGC
Trigger: GCAGCCATGGGCAAGAGAAATTGGCCTGGCTTTGACCATGAGCCATTCCCTTGGTTTGGGCAGGGCAGACACTCTGATTGACAATCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486498.1
CDS-3UTR CAA 90 bp CCGCCACCACCTTTCCCGAAGATGCACACCCCCAGGAACGGCAGTGCAAGCCTGAAAGTACAAGAAATGTaGCGTGTGAGTATTAGGCAT +
Preference number: 5 (lower is better)
Translates to: PPPPFPKMHTPRNGSASLKVQEM*RVSIRH
Trigger: ATGCCTAATACTCACACGCAACATTTCTTGTACTTT...CAGGCTTGCACTGCCGTTCCTGGGGGTGTGCATCTTCGGGAAAGGTGGTGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS CCA 90 bp TGTCAATCAGAGTGTCTGCCCTGCCCAAACCAAGGGAATGGCTCATaGTCAAAGCCAGGCCAATTTCTCTTGCCCATGGCTGCAAACCTT +
Preference number: 5 (lower is better)
Translates to: CQSECLPCPNQGNGS*SKPGQFLLPMAANL
Trigger: AAGGTTTGCAGCCATGGGCAAGAGAAATTGGCCTGGCTTTGACCATGAGCCATTCCCTTGGTTTGGGCAGGGCAGACACTCTGATTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486498.1
CDS-3UTR CAA 90 bp AAGAGCTCTCTGGAACCAAGGGGAATGACGGGAGGAACTCGGATGGCAGGGGGAAGGTGTACCAGCCATTaGTCCTGGAAGAGAAATTTT +
Preference number: 5 (lower is better)
Translates to: KSSLEPRGMTGGTRMAGGRCTSH*SWKRNF
Trigger: AAAATTTCTCTTCCAGGACAAATGGCTGGTACACCT...TCCCCCTGCCATCCGAGTTCCTCCCGTCATTCCCCTTGGTTCCAGAGAGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CAA 90 bp CCCTGGCCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATTTTCTGACAATGTGCTaGAGCCTTCTCTCATTGATG +
Preference number: 5 (lower is better)
Translates to: PWPPHRLLGVTEVSRSSNFLTMC*SLLSLM
Trigger: CATCAATGAGAGAAGGCTCAAGCACATTGTCAGAAA...ATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CAA 90 bp GTGCCACCTTCTGGTTTAAAACTGTGGCACCTTATTTCTTTTGAAATGTCACTTCGGGATCTCGACGCTTaGCGAGGAGCCCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: VPPSGLKLWHLISFEMSLRDLDA*RGAHGG
Trigger: GCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCG...AAGTGACATTTCAAAAGAAATAAGGTGCCACAGTTTTAAACCAGAAGGTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CAA 90 bp TGTGTTTCGATAAGGCTGAATAGATCTTCAGACTCATTCATGACTGTATCTGCTCGGGATCTCGACGCTTaGCGAGGAGCCCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: CVSIRLNRSSDSFMTVSARDLDA*RGAHGG
Trigger: GCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCG...AGCAGATACAGTCATGAATGAGTCTGAAGATCTATTCAGCCTTATCGAAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442798.5
ENST00000444801.5
CDS-3UTR CAA 90 bp CATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTCGGGATCTCGACGCTTaGCGAGGAGCCCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: HLYRLFNVCFQQILKSVIRDLDA*RGAHGG
Trigger: GCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCG...AATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR CAA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGCGGGATCTCGACGCTTaGCGAGGAGCCCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVRDLDA*RGAHGG
Trigger: GCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCG...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000442798.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
CDS-3UTR CAA 90 bp TTTCCAGACACGCTCCCGTGGTTAAATATACCACGCCAATTCCAAAGAATGGTTAGGTTGAGGTTGAGGTaGGGGAGGTTGGGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: FPDTLPWLNIPRQFQRMVRLRLR*GRLGSP
Trigger: AGGACTGCCCAACCTCCCCAACCTCAACCTCAACCT...AACCATTCTTTGGAATTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS CCA 90 bp GGTAATGTAGTAGCTGGATTCATTGGTGGCACAGAAGTGAGGGACTaGTTTACTTGTGGTGGCAATAACGGTACTGTTGGTACACCTGCC +
Preference number: 5 (lower is better)
Translates to: GNVVAGFIGGTEVRD*FTCGGNNGTVGTPA
Trigger: GGCAGGTGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAATGAATCCAGCTACTACATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493692.5
CDS-3UTR CAA 90 bp TGTCTGAGTGATTCTGAGAGCTCAAAACAAGGATCCGCGTATAGGCTGAAGAAAGGTGACTCAGAAGCATaGGCATCCACAGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: CLSDSESSKQGSAYRLKKGDSEA*ASTAAE
Trigger: TTCTGCGGCTGTGGATGCCAATGCTTCTGAGTCACC...TTTCTTCAGCCTATACGCGGATCCTTGTTTTGAGCTCTCAGAATCACTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CAA 90 bp TTTCTTGTACTTCCAGGCCATTTGGTTTTCCGTCTCCTGCCCTGCTGGTCTTTCTCCTGGGGAATTTTCTaGTACTTCCAGGCCATTTGG +
Preference number: 5 (lower is better)
Translates to: FLVLPGHLVFRLLPCWSFSWGIF*YFQAIW
Trigger: CCAAATGGCCTGGAAGTACAAGAAAATTCCCCAGGA...GAAAGACCAGCAGGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTACAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS-3UTR CAA 90 bp GGCAGGATACAACCCACGTCCTCGTTTAGTTTTCCCCTTGGAATTATTTACAGGTCCTGGGGAATTTTCTaGTACCCGCAGAACGTGGTA +
Preference number: 5 (lower is better)
Translates to: GRIQPTSSFSFPLGIIYRSWGIF*YPQNVV
Trigger: TACCACGTTCTGCGGGTACAAGAAAATTCCCCAGGA...CCTGTAAATAATTCCAAGGGGAAAACTAAACGAGGACGTGGGTTGTATCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CAA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGAGCAGCTCTCCTGAGCTaGCTGCAGAAGAGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LQFSEVVCILANDLQSTRAALLS*LQKSSL
Trigger: CAGAGAGCTCTTCTGCAGCAAGCTCAGGAGAGCTGC...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CAA 90 bp CCGCCCCACAGGTTACTTGGTGTGACTGAGGTCTCTCGCAGTTCCAATGTTTTGTCCTTAAGAGTGTCATaGTCTTTATTCAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PPHRLLGVTEVSRSSNVLSLRVS*SLFSSV
Trigger: CACAGAGCTGAATAAAGACAATGACACTCTTAAGGA...CAAAACATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444801.5
CDS-3UTR CAA 90 bp TTACAGTTTAGTGAGGTGGTCTGCATTCTCGCAAACGACTTACAAAGTACAAGAGGTGACTCAGAAGCATaGGCATCCACAGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: LQFSEVVCILANDLQSTRGDSEA*ASTAAE
Trigger: TTCTGCGGCTGTGGATGCCAATGCTTCTGAGTCACC...TCTTGTACTTTGTAAGTCGTTTGCGAGAATGCAGACCACCTCACTAAACTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CAA 90 bp TTTCCAGACACGCTCCCGTGGTTAAATATACCACGCCAATTCCAAAGAATGGTTTTGAGCCTTCTCTCATaGATGCCGCAGAACGTGGTA +
Preference number: 5 (lower is better)
Translates to: FPDTLPWLNIPRQFQRMVLSLLS*MPQNVV
Trigger: TACCACGTTCTGCGGCATCAATGAGAGAAGGCTCAA...AACCATTCTTTGGAATTGGCGTGGTATATTTAACCACGGGAGCGTGTCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS-3UTR CAA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGCGCCCTTCCTAACTTaGGAAGCCGCAGAACGTGGT +
Preference number: 5 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSAPFLT*EAAERG
Trigger: ACCACGTTCTGCGGCTTCCAAAGTTAGGAAGGGCGC...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454751.5
CDS-3UTR CAA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTTTCACAGTCACCACTTaGGAGACGTTGCCTCCGCGC +
Preference number: 5 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSFTVTT*ETLPPR
Trigger: GCGCGGAGGCAACGTCTCCAAAGTGGTGACTGTGAA...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454751.5
CDS-3UTR CAA 90 bp ACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCGCAGCTCTCCTGAGCTaGCTGCAGAAGAGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: TKSKNLFTVYSLVRWSAFAALLS*LQKSSL
Trigger: CAGAGAGCTCTTCTGCAGCAAGCTCAGGAGAGCTGC...GAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CAA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTACTTCCAGGCCATTaGGTTTTCCGTCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSVLPGH*VFRLLP
Trigger: GGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTAC...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR CAA 90 bp TTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCATTGTCTGTACTTCCAGGCCATTaGGTTTTCCGTCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: FTGFSTFAFSRSLRVSLSVLPGH*VFRLLP
Trigger: GGGCAGGAGACGGAAAACCAAATGGCCTGGAAGTAC...AGACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000455067.5
CDS-3UTR CAA 90 bp ACCAAAAGTAAAAATCTCTTTACCGTTTACAGTTTAGTGAGGTGGTCTGCATTCTTGAGGTTGGGGAGGTaGGGCAGTCCTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: TKSKNLFTVYSLVRWSAFLRLGR*GSPAGK
Trigger: TTTACCAGCAGGACTGCCCAACCTCCCCAACCTCAA...GAATGCAGACCACCTCACTAAACTGTAAACGGTAAAGAGATTTTTACTTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234160.5
ENST00000442798.5
CDS-3UTR CAA 90 bp GATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTTCCTGGGGAATTTTCTaGTACCCGCAGAACGTGGTA +
Preference number: 5 (lower is better)
Translates to: DKHLYRLFNVCFQQILKSSWGIF*YPQNVV
Trigger: TACCACGTTCTGCGGGTACAAGAAAATTCCCCAGGA...ACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444801.5
CDS-3UTR CAA 90 bp TTTCCCAGTATAGCTATAATACTACAAGGAGCCACAGAGTGCCACCTTCTGGTTAGGTGTACCAGCCATTaGTCCTGGAAGAGAAATTTT +
Preference number: 5 (lower is better)
Translates to: FPSIAIILQGATECHLLVRCTSH*SWKRNF
Trigger: AAAATTTCTCTTCCAGGACAAATGGCTGGTACACCT...AACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTATTATAGCTATACTGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CAA 90 bp TGTCTGAGTGATTCTGAGAGCTCAAAACAAGGATCCGCGTATAGGCTGAAGAAAAAAGTACAAGAAATGTaGCGTGTGAGTATTAGGCAT +
Preference number: 5 (lower is better)
Translates to: CLSDSESSKQGSAYRLKKKVQEM*RVSIRH
Trigger: ATGCCTAATACTCACACGCAACATTTCTTGTACTTT...TTTCTTCAGCCTATACGCGGATCCTTGTTTTGAGCTCTCAGAATCACTCAGACA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234160.5
CDS-3UTR CAA 90 bp ATAAGCATCTTTACAGGCTTTTCAACGTTTGCTTTCAGCAGATCCTTAAGAGTGTCCTGGGGAATTTTCTaGTACCTCAGTCTCCTGATT +
Preference number: 5 (lower is better)
Translates to: ISIFTGFSTFAFSRSLRVSWGIF*YLSLLI
Trigger: AATCAGGAGACTGAGGTACAAGAAAATTCCCCAGGA...CACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS GCA 90 bp TGTTTTGCTGCTATAGATAAGCATCTTTACAGGCTTTTCAACGTTTaGTTTCAGCAGATCCTTAAGAGTGTCATTGTCTTTATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: CFAAIDKHLYRLFNV*FQQILKSVIVFIQL
Trigger: GAGCTGAATAAAGACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATCTATAGCAGCAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444801.5
CDS CCA 72 bp GCGCCCGCGACCGCCGCTCCTTCGCGGGATCGGGCCTaGCTGCCCCGTGAAGGAGCCCATGGGGGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: APATAAPSRDRA*LPREGAHGGLR
Trigger: GCGGAGGCCCCCATGGGCTCCTTCACGGGGCAGCCAGGCCCGATCCCGCGAAGGAGCGGCGGTCGCGGGCGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497928.1
CDS GCA 72 bp CCGCGACCGCCGCTCCTTCGCGGGATCGGGCCTGGCTaGCCCGTGAAGGAGCCCATGGGGGCCTCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: PRPPLLRGIGPG*PVKEPMGASAS
Trigger: GGAGGCGGAGGCCCCCATGGGCTCCTTCACGGGGCAGCCAGGCCCGATCCCGCGAAGGAGCGGCGGTCGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497928.1
CDS GCA 72 bp CAGCTCCAGCCCGTCCTCCTACAGCCGCGGACCCCGTaGCCAGGGCGCTCCGCGGAGGTGGGATGCGAGCGG +
Preference number: 6 (lower is better)
Translates to: QLQPVLLQPRTP*PGRSAEVGCER
Trigger: CCGCTCGCATCCCACCTCCGCGGAGCGCCCTGGGCACGGGGTCCGCGGCTGTAGGAGGACGGGCTGGAGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497928.1
CDS CCA 72 bp CCCCGCCCGGGATCTCGACGCTTTGCGAGGAGCCCATaGCGGCGGGCGATCGGTGTGGCCGAGCCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PRPGSRRFARSP*RRAIGVAEPGS
Trigger: GGAGCCCGGCTCGGCCACACCGATCGCCCGCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000234160.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
ENST00000493692.5
ENST00000497674.5
CDS CCA 72 bp AGCCGCGGACCCCGTGCCCAGGGCGCTCCGCGGAGGTaGGATGCGAGCGGCCTCCGGAACCAGCCTCGACCA +
Preference number: 6 (lower is better)
Translates to: SRGPRAQGAPRR*DASGLRNQPRP
Trigger: TGGTCGAGGCTGGTTCCGGAGGCCGCTCGCATCCCACCTCCGCGGAGCGCCCTGGGCACGGGGTCCGCGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497928.1
CDS GCA 72 bp CGGACCCCGTGCCCAGGGCGCTCCGCGGAGGTGGGATaGGAGCGGCCTCCGGAACCAGCCTCGACCAAGGCA +
Preference number: 6 (lower is better)
Translates to: RTPCPGRSAEVG*ERPPEPASTKA
Trigger: TGCCTTGGTCGAGGCTGGTTCCGGAGGCCGCTCGCATCCCACCTCCGCGGAGCGCCCTGGGCACGGGGTCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497928.1
CDS CAA 72 bp GTAGCCCTCGGTGCCCCCGCCCGGGATCTCGACGCTTaGCGAGGAGCCCATGGCGGCGGGCGATCGGTGTGG +
Preference number: 6 (lower is better)
Translates to: VALGAPARDLDA*RGAHGGGRSVW
Trigger: CCACACCGATCGCCCGCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000234160.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
ENST00000493692.5
ENST00000497674.5
CDS CAA 90 bp CAGAACGTGGTAGCCCTCGGTGCCCCCGCCCGGGATCTCGACGCTTaGCGAGGAGCCCATGGCGGCGGGCGATCGGTGTGGCCGAGCCGG +
Preference number: 6 (lower is better)
Translates to: QNVVALGAPARDLDA*RGAHGGGRSVWPSR
Trigger: CCGGCTCGGCCACACCGATCGCCCGCCGCCATGGGCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACGTTCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000234160.5
ENST00000444801.5
ENST00000454751.5
ENST00000455067.5
ENST00000493692.5
ENST00000497674.5
CDS TCA 72 bp CTGCTGGTCTTTCAGGCCACTCGGCCGGCGCCGAGGTaGTTTAACACCTGCCGCCGCAGGCCCCGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: LLVFQATRPAPR*FNTCRRRPRLR
Trigger: CCGGAGGCGGGGCCTGCGGCGGCAGGTGTTAAATCACCTCGGCGCCGGCCGAGTGGCCTGAAAGACCAGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454751.5
ENST00000455067.5
ENST00000497928.1
CDS GCA 72 bp CCGGATCCCTCTCCCGCAGAACGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGACGCTTTGCGAGGAGC +
Preference number: 6 (lower is better)
Translates to: PDPSPAERGSPR*PRPGSRRFARS
Trigger: GCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACGTTCTGCGGGAGAGGGATCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455067.5
CDS CCA 72 bp CCGCCTGCTCTAATCCTCCGCGTAGCACTTGGGACGTaGCACTCGCTGCCGCCGGAGAGCCGGGCCGCACAG +
Preference number: 6 (lower is better)
Translates to: PPALILRVALGT*HSLPPESRAAQ
Trigger: CTGTGCGGCCCGGCTCTCCGGCGGCAGCGAGTGCCACGTCCCAAGTGCTACGCGGAGGATTAGAGCAGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444801.5
CDS CCA 72 bp CAGCGCACCGCCTGCTCTAATCCTCCGCGTAGCACTTaGGACGTGGCACTCGCTGCCGCCGGAGAGCCGGGC +
Preference number: 6 (lower is better)
Translates to: QRTACSNPPRST*DVALAAAGEPG
Trigger: GCCCGGCTCTCCGGCGGCAGCGAGTGCCACGTCCCAAGTGCTACGCGGAGGATTAGAGCAGGCGGTGCGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444801.5
CDS GCA 72 bp TCTCTCATTGATGCCGCAGAACGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGACGCTTTGCGAGGAGC +
Preference number: 6 (lower is better)
Translates to: SLIDAAERGSPR*PRPGSRRFARS
Trigger: GCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACGTTCTGCGGCATCAATGAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442798.5
CDS GCA 72 bp CTAACTTTGGAAGCCGCAGAACGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGACGCTTTGCGAGGAGC +
Preference number: 6 (lower is better)
Translates to: LTLEAAERGSPR*PRPGSRRFARS
Trigger: GCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACGTTCTGCGGCTTCCAAAGTTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454751.5
CDS GCA 72 bp AATTTTCTTGTACCCGCAGAACGTGGTAGCCCTCGGTaGCCCCGCCCGGGATCTCGACGCTTTGCGAGGAGC +
Preference number: 6 (lower is better)
Translates to: NFLVPAERGSPR*PRPGSRRFARS
Trigger: GCTCCTCGCAAAGCGTCGAGATCCCGGGCGGGGGCACCGAGGGCTACCACGTTCTGCGGGTACAAGAAAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234160.5
ENST00000444801.5
ENST00000493692.5
ENST00000497674.5
CDS GCA 72 bp CGGGTCCGGATCCCTCTCCTAGGAAAGCGCAAAGGCTaGCTTCACAGTCACCACTTTGGAGACGTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: RVRIPLLGKRKG*LHSHHFGDVAS
Trigger: GGAGGCAACGTCTCCAAAGTGGTGACTGTGAAGGCAGCCTTTGCGCTTTCCTAGGAGAGGGATCCGGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454751.5
ENST00000497928.1
CDS GCA 72 bp CAAAGGCTGCCTTCACAGTCACCACTTTGGAGACGTTaGCTCCGCGCCCTTCCTAACTTTGGAAGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: QRLPSQSPLWRR*LRALPNFGSRR
Trigger: TCTGCGGCTTCCAAAGTTAGGAAGGGCGCGGAGGCAACGTCTCCAAAGTGGTGACTGTGAAGGCAGCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454751.5
CDS CCA 72 bp TCAATCAGAGTGTCTGCCCTGCCCAAACCAAGGGAATaGCTCATGGTCAAAGCCAGGCCAATTTCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: SIRVSALPKPRE*LMVKARPISLA
Trigger: GGCAAGAGAAATTGGCCTGGCTTTGACCATGAGCCATTCCCTTGGTTTGGGCAGGGCAGACACTCTGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486498.1
CDS CAA 72 bp GGGAATGGCTCATGGTCAAAGCCAGGCCAATTTCTCTaGCCCATGGCTGCAAACCTTGGGAGTCAGAGAAAA +
Preference number: 6 (lower is better)
Translates to: GNGSWSKPGQFL*PMAANLGSQRK
Trigger: TTTTCTCTGACTCCCAAGGTTTGCAGCCATGGGCAAGAGAAATTGGCCTGGCTTTGACCATGAGCCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486498.1
CDS CAA 90 bp CTTGTACCTCCTTCAGGTAGCCAGGTCGTATTCATGCTTATTCCGTaGTCGTATTCCGTTGCTGCTTTTGCCCCTTACGTGTACTCCCTC +
Preference number: 6 (lower is better)
Translates to: LVPPSGSQVVFMLIP*SYSVAAFAPYVYSL
Trigger: GAGGGAGTACACGTAAGGGGCAAAAGCAGCAACGGAATACGACAACGGAATAAGCATGAATACGACCTGGCTACCTGAAGGAGGTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471559.5
CDS CAA 72 bp CCTTCAGGTAGCCAGGTCGTATTCATGCTTATTCCGTaGTCGTATTCCGTTGCTGCTTTTGCCCCTTACGTG +
Preference number: 6 (lower is better)
Translates to: PSGSQVVFMLIP*SYSVAAFAPYV
Trigger: CACGTAAGGGGCAAAAGCAGCAACGGAATACGACAACGGAATAAGCATGAATACGACCTGGCTACCTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471559.5
CDS CAA 72 bp ATTACTTCTCTGCTGTTGTGTGCAGTGCTGGTAGGATaGTCAATCAGAGTGTCTGCCCTGCCCAAACCAAGG +
Preference number: 6 (lower is better)
Translates to: ITSLLLCAVLVG*SIRVSALPKPR
Trigger: CCTTGGTTTGGGCAGGGCAGACACTCTGATTGACAATCCTACCAGCACTGCACACAACAGCAGAGAAGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486498.1
CDS GCA 72 bp CATGCTTATTCCGTTGTCGTATTCCGTTGCTGCTTTTaGCCCTTACGTGTACTCCCTCTGAAACCCCTAGTT +
Preference number: 6 (lower is better)
Translates to: HAYSVVVFRCCF*PLRVLPLKPLV
Trigger: AACTAGGGGTTTCAGAGGGAGTACACGTAAGGGGCAAAAGCAGCAACGGAATACGACAACGGAATAAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471559.5
CDS GCA 72 bp CGTATTCATGCTTATTCCGTTGTCGTATTCCGTTGCTaGTTTTGCCCCTTACGTGTACTCCCTCTGAAACCC +
Preference number: 6 (lower is better)
Translates to: RIHAYSVVVFRC*FCPLRVLPLKP
Trigger: GGGTTTCAGAGGGAGTACACGTAAGGGGCAAAAGCAGCAACGGAATACGACAACGGAATAAGCATGAATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471559.5
CDS CCA 72 bp AAAATCAAAGAAAGGCTCCAAACCAGCTCTGTGTCCTaGGGAATTTTCTTGTACCCGCAGAACGTGGTAGCC +
Preference number: 6 (lower is better)
Translates to: KIKERLQTSSVS*GIFLYPQNVVA
Trigger: GGCTACCACGTTCTGCGGGTACAAGAAAATTCCCCAGGACACAGAGCTGGTTTGGAGCCTTTCTTTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234160.5
ENST00000493692.5
ENST00000497674.5
CDS CAA 72 bp TCATGCTTATTCCGTTGTCGTATTCCGTTGCTGCTTTaGCCCCTTACGTGTACTCCCTCTGAAACCCCTAGT +
Preference number: 6 (lower is better)
Translates to: SCLFRCRIPLLL*PLTCTPSETPS
Trigger: ACTAGGGGTTTCAGAGGGAGTACACGTAAGGGGCAAAAGCAGCAACGGAATACGACAACGGAATAAGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471559.5
CDS GCA 72 bp GGTCGTATTCATGCTTATTCCGTTGTCGTATTCCGTTaGTGCTTTTGCCCCTTACGTGTACTCCCTCTGAAA +
Preference number: 6 (lower is better)
Translates to: GRIHAYSVVVFR*CFCPLRVLPLK
Trigger: TTTCAGAGGGAGTACACGTAAGGGGCAAAAGCAGCAACGGAATACGACAACGGAATAAGCATGAATACGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471559.5
CDS CCA 72 bp AAAATCAAAGAAAGGCTCCAAACCAGCTCTGTGTCCTaGGGAATTTTCTTGTACCTCCTTCAGGTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: KIKERLQTSSVS*GIFLYLLQVAR
Trigger: CCTGGCTACCTGAAGGAGGTACAAGAAAATTCCCCAGGACACAGAGCTGGTTTGGAGCCTTTCTTTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471559.5
CDS CAA 72 bp AGGTCGTATTCATGCTTATTCCGTTGTCGTATTCCGTaGCTGCTTTTGCCCCTTACGTGTACTCCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: RSYSCLFRCRIP*LLLPLTCTPSE
Trigger: TTCAGAGGGAGTACACGTAAGGGGCAAAAGCAGCAACGGAATACGACAACGGAATAAGCATGAATACGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471559.5
CDS GCA 72 bp TTCTTGTACCTCCTTCAGGTAGCCAGGTCGTATTCATaGTTATTCCGTTGTCGTATTCCGTTGCTGCTTTTG +
Preference number: 6 (lower is better)
Translates to: FLYLLQVARSYS*LFRCRIPLLLL
Trigger: CAAAAGCAGCAACGGAATACGACAACGGAATAAGCATGAATACGACCTGGCTACCTGAAGGAGGTACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471559.5
CDS GCA 72 bp AACGGTACTGTTGGTACACCTGCCTTCTCCACCCCATaGAGAATTTGGTGTAATAATCACTTCTCGACAGTT +
Preference number: 6 (lower is better)
Translates to: NGTVGTPAFSTP*RIWCNNHFSTV
Trigger: AACTGTCGAGAAGTGATTATTACACCAAATTCTGCATGGGGTGGAGAAGGCAGGTGTACCAACAGTACCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493692.5