RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GORAB (Homo sapiens)

Ensembl gene IDs: ENSG00000120370

Ensembl transcript IDs: ENST00000367762.2, ENST00000367763.8, ENST00000465717.1, ENST00000475113.1, ENST00000498166.6

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACATTGTTGTGACCATCATGGGAATTCTCAAGTCCCAGTTCCTTTaGCTGACTTTCAATGCCCTGTGGTTGTCCATCACCAACGGGGGA +
Preference number: 1 (lower is better)
Translates to: NIVVTIMGILKSQFL*LTFNALWLSITNGG
Trigger: TCCCCCGTTGGTGATGGACAACCACAGGGCATTGAAAGTCAGCCAAAGGAACTGGGACTTGAGAATTCCCATGATGGTCACAACAATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR TCA 90 bp GGTGCTGAAAGCAGCTGCTCTGGAAGTAATGAGGTTGATCCATCTTaGAGCCCAAGTTTTTGGCTTTGCTCTACAAGGGCTTTTTCTCGC +
Preference number: 1 (lower is better)
Translates to: GAESSCSGSNEVDPS*SPSFWLCSTRAFSR
Trigger: GCGAGAAAAAGCCCTTGTAGAGCAAAGCCAAAAACTTGGGCTTCAAGATGGATCAACCTCATTACTTCCAGAGCAGCTGCTTTCAGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR TCA 90 bp TCCGAGCGTATGAATAGTCTAAGCTGGCCTGATCAATCCGGTTCCTaGGAATTCCAATGTCAGCTGACACCATGTCATCTAAAGCCTGCA +
Preference number: 1 (lower is better)
Translates to: SERMNSLSWPDQSGS*EFQCQLTPCHLKPA
Trigger: TGCAGGCTTTAGATGACATGGTGTCAGCTGACATTGGAATTCTCAGGAACCGGATTGATCAGGCCAGCTTAGACTATTCATACGCTCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR TCA 90 bp CTGTTCTCTTTAGCAAATTCTAATGTCACACTCTCCTCCGCAGGCTaGAATGGCCTCTCTAAACGAACCACTGGTCTCCTTGATTCTACT +
Preference number: 1 (lower is better)
Translates to: LFSLANSNVTLSSAG*NGLSKRTTGLLDST
Trigger: AGTAGAATCAAGGAGACCAGTGGTTCGTTTAGAGAGGCCATTTCAGCCTGCGGAGGAGAGTGTGACATTAGAATTTGCTAAAGAGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR GCA 90 bp CGGAGCTCATTTTGCTGTATGATCGTACAAAGGTGTTCAGTGAGTTaGTCTTTTATCTCAGTCTTGCGCTGTATATCTAGCTTTGCTGCA +
Preference number: 1 (lower is better)
Translates to: RSSFCCMIVQRCSVS*SFISVLRCISSFAA
Trigger: TGCAGCAAAGCTAGATATACAGCGCAAGACTGAGATAAAAGAGCAACTCACTGAACACCTTTGTACGATCATACAGCAAAATGAGCTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR CAA 90 bp CCTCCGCAGGCTGAAATGGCCTCTCTAAACGAACCACTGGTCTCCTaGATTCTACTTCTTGTTCGTGTAGCAATCTCTCGACCTCCACCT +
Preference number: 2 (lower is better)
Translates to: PPQAEMASLNEPLVS*ILLLVRVAISRPPP
Trigger: AGGTGGAGGTCGAGAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTTAGAGAGGCCATTTCAGCCTGCGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR TCA 90 bp CTAAGAAAGGGGATGCTACTGGAATTTCCACACTGGTCATCTACCTTTGGGGAACTCTCCTCCGCAGGCTaGAATGGCCTCTCTAAACGA +
Preference number: 2 (lower is better)
Translates to: LRKGMLLEFPHWSSTFGELSSAG*NGLSKR
Trigger: TCGTTTAGAGAGGCCATTTCAGCCTGCGGAGGAGAG...TTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAGTAGCATCCCCTTTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR TCA 90 bp AATCTCTCGACCTCCACCTCAAGCTCCAAAGTCTCTTCATCGGCTTCTACATCTTCTCTGTTTTGGTGCTaGAAGCAGCTGCTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: NLSTSTSSSKVSSSASTSSLFWC*KQLLWK
Trigger: CTTCCAGAGCAGCTGCTTTCAGCACCAAAACAGAGA...AGATGTAGAAGCCGATGAAGAGACTTTGGAGCTTGAGGTGGAGGTCGAGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR GCA 90 bp GCTTTGCTGCAATGTACTCTGCTTCAGCCCTGTCAAACCGCTTCCGAGCGTATGCCAAGTTTTTGGCTTTaGTCTACAAGGGCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: ALLQCTLLQPCQTASERMPSFWL*STRAFS
Trigger: AGAAAAAGCCCTTGTAGAGCAAAGCCAAAAACTTGG...CATACGCTCGGAAGCGGTTTGACAGGGCTGAAGCAGAGTACATTGCAGCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR GCA 90 bp AATCTCTCGACCTCCACCTCAAGCTCCAAAGTCTCTTCATCGGCTTCTACATCTATGTCATCTAAAGCCTaGAACTCCTTCTGGATCCGC +
Preference number: 2 (lower is better)
Translates to: NLSTSTSSSKVSSSASTSMSSKA*NSFWIR
Trigger: GCGGATCCAGAAGGAGTTGCAGGCTTTAGATGACAT...AGATGTAGAAGCCGATGAAGAGACTTTGGAGCTTGAGGTGGAGGTCGAGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CCA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACGGGGAGACGTCGCTGTaGTTCAAATGGATCTCACTG +
Preference number: 2 (lower is better)
Translates to: SKVSSSASTSSCCINSSNGETSL*FKWISL
Trigger: CAGTGAGATCCATTTGAACCACAGCGACGTCTCCCC...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR TCA 90 bp AAACGAACCACTGGTCTCCTTGATTCTACTTCTTGTTCGTGTAGCAATCTCTCGGAGGTGAGAGTGAAATaGCTCGGAAGAGTAGGGGAA +
Preference number: 2 (lower is better)
Translates to: KRTTGLLDSTSCSCSNLSEVRVK*LGRVGE
Trigger: TTCCCCTACTCTTCCGAGTCATTTCACTCTCACCTC...CGAGAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR TCA 90 bp TCTAAACGAACCACTGGTCTCCTTGATTCTACTTCTTGTTCGTGTAGCAATCTCCCCAGTTCCTTTGGCTaGCTTTCAATGCCCTGTGGT +
Preference number: 2 (lower is better)
Translates to: SKRTTGLLDSTSCSCSNLPSSFG*LSMPCG
Trigger: ACCACAGGGCATTGAAAGTCAGCCAAAGGAACTGGG...GAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR GCA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACTGCTGCAATGTACTCTaGTTCAGCCCTGTCAAACCG +
Preference number: 2 (lower is better)
Translates to: SKVSSSASTSSCCINSSNCCNVL*FSPVKP
Trigger: CGGTTTGACAGGGCTGAAGCAGAGTACATTGCAGCA...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CCA 90 bp TCTAAACGAACCACTGGTCTCCTTGATTCTACTTCTTGTTCGTGTAGCAATCTCACTTTCAATGCCCTGTaGTTGTCCATCACCAACGGG +
Preference number: 2 (lower is better)
Translates to: SKRTTGLLDSTSCSCSNLTFNAL*LSITNG
Trigger: CCCGTTGGTGATGGACAACCACAGGGCATTGAAAGT...GAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CCA 90 bp ACCTTCTTGATTTGGGCAGTTTGGACTAAGAAAGGGGATGCTACTGGAATTTCCGCCTGCAACTCCTTCTaGATCCGCTTTAGTTTCATG +
Preference number: 2 (lower is better)
Translates to: TFLIWAVWTKKGDATGISACNSF*IRFSFM
Trigger: CATGAAACTAAAGCGGATCCAGAAGGAGTTGCAGGC...GGAAATTCCAGTAGCATCCCCTTTCTTAGTCCAAACTGCCCAAATCAAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CCA 90 bp CTAAGAAAGGGGATGCTACTGGAATTTCCACACTGGTCATCTACCTTTGGGGAAATGAATAGTCTAAGCTaGCCTGATCAATCCGGTTCC +
Preference number: 2 (lower is better)
Translates to: LRKGMLLEFPHWSSTFGEMNSLS*PDQSGS
Trigger: GGAACCGGATTGATCAGGCCAGCTTAGACTATTCAT...TTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAGTAGCATCCCCTTTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR CAA 90 bp TCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACTTCTaGGCCTTTCGGAGCTCATTTTGCTGTATGATCGTACAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: SSASTSSCCINSSNF*AFRSSFCCMIVQRC
Trigger: ACACCTTTGTACGATCATACAGCAAAATGAGCTCCGAAAGGCCAAGAAGTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR TCA 90 bp TTCCTGAGAATTCCAATGTCAGCTGACACCATGTCATCTAAAGCCTGCAACTCCTTGGAGGTCAGGGCATaGTCTACTGCAAAAAGTATA +
Preference number: 2 (lower is better)
Translates to: FLRIPMSADTMSSKACNSLEVRA*STAKSI
Trigger: TATACTTTTTGCAGTAGATCATGCCCTGACCTCCAA...GGAGTTGCAGGCTTTAGATGACATGGTGTCAGCTGACATTGGAATTCTCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR TCA 90 bp AAACGAACCACTGGTCTCCTTGATTCTACTTCTTGTTCGTGTAGCAATCTCTCGAGGGCTTTTTCTCGCTaGAGTTGTTGTCGACTTTTC +
Preference number: 2 (lower is better)
Translates to: KRTTGLLDSTSCSCSNLSRAFSR*SCCRLF
Trigger: GAAAAGTCGACAACAACTTCAGCGAGAAAAAGCCCT...CGAGAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR CAA 90 bp ATGATCGTACAAAGGTGTTCAGTGAGTTGCTCTTTTATCTCAGTCTaGCGCTGTATATCTAGCTTTGCTGCAATGTACTCTGCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: MIVQRCSVSCSFISV*RCISSFAAMYSASA
Trigger: GGCTGAAGCAGAGTACATTGCAGCAAAGCTAGATATACAGCGCAAGACTGAGATAAAAGAGCAACTCACTGAACACCTTTGTACGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR GCA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACTTTCGGAGCTCATTTTaGTGTATGATCGTACAAAGG +
Preference number: 2 (lower is better)
Translates to: SKVSSSASTSSCCINSSNFRSSF*CMIVQR
Trigger: CCTTTGTACGATCATACAGCAAAATGAGCTCCGAAA...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR TCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATGATCAATCCGGTTCCTaGGAATTCCAATGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHDQSGS*EFQCQL
Trigger: CAGCTGACATTGGAATTCTCAGGAACCGGATTGATC...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR GCA 90 bp ACCTTCTTGATTTGGGCAGTTTGGACTAAGAAAGGGGATGCTACTGGAATTTCCTCTTTTTCTCCAATTTaGAATCTGGCTTTGGAGGTA +
Preference number: 2 (lower is better)
Translates to: TFLIWAVWTKKGDATGISSFSPI*NLALEV
Trigger: TACCTCCAAAGCCAGATTGCAAATTGGAGAAAAAGA...GGAAATTCCAGTAGCATCCCCTTTCTTAGTCCAAACTGCCCAAATCAAGAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CCA 90 bp TCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGACTTCAAAATACAGCACTGAATaGGGTTGTTTTGAGGCTTCA +
Preference number: 2 (lower is better)
Translates to: SNGTRTRLTSRAELRKTSKYSTE*GCFEAS
Trigger: TGAAGCCTCAAAACAACCCCATTCAGTGCTGTATTT...TGAAGTCTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367762.2
3UTR-3UTR CCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATCTGGAATTTCCACACTaGTCATCTACCTTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHLEFPH*SSTFGE
Trigger: TTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAG...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CCA 90 bp CAGCATTGTTTTAAAGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAATACCAGAACTTCATGTaGCCAAAGCAGCTGAAATGT +
Preference number: 2 (lower is better)
Translates to: QHCFKEVFIGGQGMIYCKYQNFM*PKQLKC
Trigger: ACATTTCAGCTGCTTTGGCCACATGAAGTTCTGGTA...TTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCTTTAAAACAATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR TCA 90 bp TATAAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCACTAGATGCTGAAAGATaGGCAAAAACACTTCCAAAC +
Preference number: 2 (lower is better)
Translates to: YKHSDVVVYPGLMRHSDSLDAER*AKTLPN
Trigger: GTTTGGAAGTGTTTTTGCTCATCTTTCAGCATCTAG...TGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367762.2
3UTR CAA 90 bp TTTCTTGCAATTCCACTTTCTTTTTCTCCAATTTGCAATCTGGCTTaGGAGGTAGAATCTCAACATTGTTGTGACCATCATGGGAATTCT +
Preference number: 2 (lower is better)
Translates to: FLAIPLSFSPICNLA*EVESQHCCDHHGNS
Trigger: AGAATTCCCATGATGGTCACAACAATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAATTGGAGAAAAAGAAAGTGGAATTGCAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR TCA 90 bp ATGAAAGCTAAAGTGAGGACTAGACTTCAATCCTATAGGACTATATCAGATATCCAAACATTAAATAGCTaGGGGTTTCGCAGCAAAGAC +
Preference number: 2 (lower is better)
Translates to: MKAKVRTRLQSYRTISDIQTLNS*GFRSKD
Trigger: GTCTTTGCTGCGAAACCCTCAGCTATTTAATGTTTG...GATATCTGATATAGTCCTATAGGATTGAAGTCTAGTCCTCACTTTAGCTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367762.2
3UTR CCA 72 bp GTGACCATCATGGGAATTCTCAAGTCCCAGTTCCTTTaGCTGACTTTCAATGCCCTGTGGTTGTCCATCACC +
Preference number: 3 (lower is better)
Translates to: VTIMGILKSQFL*LTFNALWLSIT
Trigger: GGTGATGGACAACCACAGGGCATTGAAAGTCAGCCAAAGGAACTGGGACTTGAGAATTCCCATGATGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CAA 90 bp ATTTGCAATCTGGCTTTGGAGGTAGAATCTCAACATTGTTGTGACCATCATGGGTTCAATGCCCTGTGGTaGTCCATCACCAACGGGGGA +
Preference number: 3 (lower is better)
Translates to: ICNLALEVESQHCCDHHGFNALW*SITNGG
Trigger: TCCCCCGTTGGTGATGGACAACCACAGGGCATTGAA...CCCATGATGGTCACAACAATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR TCA 72 bp AGCAGCTGCTCTGGAAGTAATGAGGTTGATCCATCTTaGAGCCCAAGTTTTTGGCTTTGCTCTACAAGGGCT +
Preference number: 3 (lower is better)
Translates to: SSCSGSNEVDPS*SPSFWLCSTRA
Trigger: AGCCCTTGTAGAGCAAAGCCAAAAACTTGGGCTTCAAGATGGATCAACCTCATTACTTCCAGAGCAGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR TCA 72 bp TTAGCAAATTCTAATGTCACACTCTCCTCCGCAGGCTaGAATGGCCTCTCTAAACGAACCACTGGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: LANSNVTLSSAG*NGLSKRTTGLL
Trigger: AAGGAGACCAGTGGTTCGTTTAGAGAGGCCATTTCAGCCTGCGGAGGAGAGTGTGACATTAGAATTTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CAA 90 bp TCTAAACGAACCACTGGTCTCCTTGATTCTACTTCTTGTTCGTGTAGCAATCTCTTCTCGCTGAAGTTGTaGTCGACTTTTCTTCGCGGG +
Preference number: 3 (lower is better)
Translates to: SKRTTGLLDSTSCSCSNLFSLKL*STFLRG
Trigger: CCCGCGAAGAAAAGTCGACAACAACTTCAGCGAGAA...GAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR GCA 72 bp ATTCCAATGTCAGCTGACACCATGTCATCTAAAGCCTaGAACTCCTTCTGGATCCGCTTTAGTTTCATGGTC +
Preference number: 3 (lower is better)
Translates to: IPMSADTMSSKA*NSFWIRFSFMV
Trigger: GACCATGAAACTAAAGCGGATCCAGAAGGAGTTGCAGGCTTTAGATGACATGGTGTCAGCTGACATTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CAA 90 bp ATTTGCAATCTGGCTTTGGAGGTAGAATCTCAACATTGTTGTGACCATCATGGGGTAATTCTCTGCTCCTaGGTGGTGATGAGCATCTCT +
Preference number: 3 (lower is better)
Translates to: ICNLALEVESQHCCDHHGVILCS*VVMSIS
Trigger: AGAGATGCTCATCACCACCAAGGAGCAGAGAATTAC...CCCATGATGGTCACAACAATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR TCA 72 bp TCCTTCTGGATCCGCTTTAGTTTCATGGTCTCTGCCTaGGTTCTTTTGGATCTTTCTGCAATAGCTTTAGCC +
Preference number: 3 (lower is better)
Translates to: SFWIRFSFMVSA*VLLDLSAIALA
Trigger: GGCTAAAGCTATTGCAGAAAGATCCAAAAGAACTCAGGCAGAGACCATGAAACTAAAGCGGATCCAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR TCA 72 bp ATGAATAGTCTAAGCTGGCCTGATCAATCCGGTTCCTaGGAATTCCAATGTCAGCTGACACCATGTCATCTA +
Preference number: 3 (lower is better)
Translates to: MNSLSWPDQSGS*EFQCQLTPCHL
Trigger: TAGATGACATGGTGTCAGCTGACATTGGAATTCTCAGGAACCGGATTGATCAGGCCAGCTTAGACTATTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR CCA 72 bp GATGCTACTGGAATTTCCACACTGGTCATCTACCTTTaGGGAAACAGCTTGTTCTTGACACTTTCTGTTCTC +
Preference number: 3 (lower is better)
Translates to: DATGISTLVIYL*GNSLFLTLSVL
Trigger: GAGAACAGAAAGTGTCAAGAACAAGCTGTTTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAGTAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CAA 90 bp AATCTCTCGACCTCCACCTCAAGCTCCAAAGTCTCTTCATCGGCTTCTACATCTGCTGGTTTAAGTTGTTaGGTTCTTCACATAAATTCC +
Preference number: 3 (lower is better)
Translates to: NLSTSTSSSKVSSSASTSAGLSC*VLHINS
Trigger: GGAATTTATGTGAAGAACCAAACAACTTAAACCAGC...AGATGTAGAAGCCGATGAAGAGACTTTGGAGCTTGAGGTGGAGGTCGAGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CAA 90 bp TTCCTGAGAATTCCAATGTCAGCTGACACCATGTCATCTAAAGCCTGCAACTCCATTTGCAATCTGGCTTaGGAGGTAGAATCTCAACAT +
Preference number: 3 (lower is better)
Translates to: FLRIPMSADTMSSKACNSICNLA*EVESQH
Trigger: ATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAAT...GGAGTTGCAGGCTTTAGATGACATGGTGTCAGCTGACATTGGAATTCTCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR TCA 72 bp CAATCTGGCTTTGGAGGTAGAATCTCAACATTGTTGTaGCCATCATGGGAATTCTCAAGTCCCAGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: QSGFGGRISTLL*PSWEFSSPSSF
Trigger: AAAGGAACTGGGACTTGAGAATTCCCATGATGGTCACAACAATGTTGAGATTCTACCTCCAAAGCCAGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CAA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACGATCTCACTGTATTCTaGATTTGTAATTCTCTGCTC +
Preference number: 3 (lower is better)
Translates to: SKVSSSASTSSCCINSSNDLTVF*ICNSLL
Trigger: GAGCAGAGAATTACAAATCAAGAATACAGTGAGATC...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CAA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATGAACCACTGGTCTCCTaGATTCTACTTCTTGTTCGT +
Preference number: 3 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHEPLVS*ILLLVR
Trigger: ACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTC...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR GCA 72 bp TTTTGCTGTATGATCGTACAAAGGTGTTCAGTGAGTTaGTCTTTTATCTCAGTCTTGCGCTGTATATCTAGC +
Preference number: 3 (lower is better)
Translates to: FCCMIVQRCSVS*SFISVLRCISS
Trigger: GCTAGATATACAGCGCAAGACTGAGATAAAAGAGCAACTCACTGAACACCTTTGTACGATCATACAGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR CCA 72 bp CGTTTATTTTTCTCTTCCATTAGCCGTTGTTCTTGTTaGAGGACTTCCCAACGAGATTTTTCTTGCAATTCC +
Preference number: 3 (lower is better)
Translates to: RLFFSSISRCSC*RTSQRDFSCNS
Trigger: GGAATTGCAAGAAAAATCTCGTTGGGAAGTCCTCCAACAAGAACAACGGCTAATGGAAGAGAAAAATAAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR-3UTR CAA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATGCTGGTTTAAGTTGTTaGGTTCTTCACATAAATTCC +
Preference number: 3 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHAGLSC*VLHINS
Trigger: GGAATTTATGTGAAGAACCAAACAACTTAAACCAGC...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp GCTTTGCTGCAATGTACTCTGCTTCAGCCCTGTCAAACCGCTTCCGAGCGTATGCCCAGTTCCTTTGGCTaGCTTTCAATGCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: ALLQCTLLQPCQTASERMPSSFG*LSMPCG
Trigger: ACCACAGGGCATTGAAAGTCAGCCAAAGGAACTGGG...CATACGCTCGGAAGCGGTTTGACAGGGCTGAAGCAGAGTACATTGCAGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp TTTCTCGCTGAAGTTGTTGTCGACTTTTCTTCGCGGGGAGACGTCGCTGTGGTTCTCTCCTCCGCAGGCTaGAATGGCCTCTCTAAACGA +
Preference number: 4 (lower is better)
Translates to: FLAEVVVDFSSRGDVAVVLSSAG*NGLSKR
Trigger: TCGTTTAGAGAGGCCATTTCAGCCTGCGGAGGAGAG...AACCACAGCGACGTCTCCCCGCGAAGAAAAGTCGACAACAACTTCAGCGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR GCA 90 bp CATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTCTACGGCACCCCCAAAAGTaGCCAAATCTCGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: HSDVVVYPGLMRHSDSFLRHPQK*PNLAAA
Trigger: CGCGGCTGCGAGATTTGGGCACTTTTGGGGGTGCCG...TAGAAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp AATCTCTCGACCTCCACCTCAAGCTCCAAAGTCTCTTCATCGGCTTCTACATCTGAGGTGAGAGTGAAATaGCTCGGAAGAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: NLSTSTSSSKVSSSASTSEVRVK*LGRVGE
Trigger: TTCCCCTACTCTTCCGAGTCATTTCACTCTCACCTC...AGATGTAGAAGCCGATGAAGAGACTTTGGAGCTTGAGGTGGAGGTCGAGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR GCA 90 bp TATAAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATCTCGCAGCCGCGACTaGCAACACTGCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: YKHSDVVVYPGLMRHSDSSRSRD*QHCCPA
Trigger: AGCTGGGCAGCAGTGTTGGCAGTCGCGGCTGCGAGA...TGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR GCA 90 bp CAGCATTGTTTTAAAGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAATCTCGCAGCCGCGACTaGCAACACTGCTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QHCFKEVFIGGQGMIYCKSRSRD*QHCCPA
Trigger: AGCTGGGCAGCAGTGTTGGCAGTCGCGGCTGCGAGA...TTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCTTTAAAACAATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR GCA 90 bp TCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGACTTCACTCCTCAGAGAATCCTaGCCAACCTTGCGCCATCGG +
Preference number: 4 (lower is better)
Translates to: SNGTRTRLTSRAELRKTSLLRES*PTLRHR
Trigger: CCGATGGCGCAAGGTTGGGCAGGATTCTCTGAGGAG...TGAAGTCTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR GCA 90 bp AAGTCACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCACTCCTCAGAGAATCCTaGCCAACCTTGCGCCATCGG +
Preference number: 4 (lower is better)
Translates to: KSLTFSKKGKRNTERTGPLLRES*PTLRHR
Trigger: CCGATGGCGCAAGGTTGGGCAGGATTCTCTGAGGAG...TGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTCGGCACCCCCAAAAGTaGCCAAATCTCGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIIRHPQK*PNLAAA
Trigger: CGCGGCTGCGAGATTTGGGCACTTTTGGGGGTGCCG...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp TTCCTGAGAATTCCAATGTCAGCTGACACCATGTCATCTAAAGCCTGCAACTCCACTTTCAATGCCCTGTaGTTGTCCATCACCAACGGG +
Preference number: 4 (lower is better)
Translates to: FLRIPMSADTMSSKACNSTFNAL*LSITNG
Trigger: CCCGTTGGTGATGGACAACCACAGGGCATTGAAAGT...GGAGTTGCAGGCTTTAGATGACATGGTGTCAGCTGACATTGGAATTCTCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACTCTCTGTTTTGGTGCTaGAAGCAGCTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SKVSSSASTSSCCINSSNSLFWC*KQLLWK
Trigger: CTTCCAGAGCAGCTGCTTTCAGCACCAAAACAGAGA...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CCA 90 bp CTAAGAAAGGGGATGCTACTGGAATTTCCACACTGGTCATCTACCTTTGGGGAAAGCCGTTGTTCTTGTTaGAGGACTTCCCAACGAGAT +
Preference number: 4 (lower is better)
Translates to: LRKGMLLEFPHWSSTFGESRCSC*RTSQRD
Trigger: ATCTCGTTGGGAAGTCCTCCAACAAGAACAACGGCT...TTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAGTAGCATCCCCTTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CCA 90 bp TCGCGGGGAGACGTCGCTGTGGTTCAAATGGATCTCACTGTATTCTTGATTTGTACTCCTCCAACTTCTTaGCCTTTCGGAGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: SRGDVAVVQMDLTVFLICTPPTS*PFGAHF
Trigger: AAAATGAGCTCCGAAAGGCCAAGAAGTTGGAGGAGT...ACAAATCAAGAATACAGTGAGATCCATTTGAACCACAGCGACGTCTCCCCGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp TCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGACTTCATCTCTGTTTTGGTGCTaGAAGCAGCTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SNGTRTRLTSRAELRKTSSLFWC*KQLLWK
Trigger: CTTCCAGAGCAGCTGCTTTCAGCACCAAAACAGAGA...TGAAGTCTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp CACAGACTTGGTGTCAGAGTAACAGTTTTGGCGAAACCACTCAGATATTTACTTCCCAGTTCCTTTGGCTaGCTTTCAATGCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HRLGVRVTVLAKPLRYLLPSSFG*LSMPCG
Trigger: ACCACAGGGCATTGAAAGTCAGCCAAAGGAACTGGG...AAGTAAATATCTGAGTGGTTTCGCCAAAACTGTTACTCTGACACCAAGTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp AACTGCTCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGGATCAATCCGGTTCCTaGGAATTCCAATGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: NCSNGTRTRLTSRAELRKDQSGS*EFQCQL
Trigger: CAGCTGACATTGGAATTCTCAGGAACCGGATTGATC...CTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR GCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTCTCCTCAGAGAATCCTaGCCAACCTTGCGCCATCGG +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIILLRES*PTLRHR
Trigger: CCGATGGCGCAAGGTTGGGCAGGATTCTCTGAGGAG...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
3UTR CAA 72 bp GCTCTTTTATCTCAGTCTTGCGCTGTATATCTAGCTTaGCTGCAATGTACTCTGCTTCAGCCCTGTCAAACC +
Preference number: 4 (lower is better)
Translates to: ALLSQSCAVYLA*LQCTLLQPCQT
Trigger: GGTTTGACAGGGCTGAAGCAGAGTACATTGCAGCAAAGCTAGATATACAGCGCAAGACTGAGATAAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR CAA 72 bp GCTGAAATGGCCTCTCTAAACGAACCACTGGTCTCCTaGATTCTACTTCTTGTTCGTGTAGCAATCTCTCGA +
Preference number: 4 (lower is better)
Translates to: AEMASLNEPLVS*ILLLVRVAISR
Trigger: TCGAGAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTTAGAGAGGCCATTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp AGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCTCTCCTCCGCAGGCTaGAATGGCCTCTCTAAACGA +
Preference number: 4 (lower is better)
Translates to: RGFYWRSGHDLLQKVYFTLSSAG*NGLSKR
Trigger: TCGTTTAGAGAGGCCATTTCAGCCTGCGGAGGAGAG...AGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATTGCTGCAATGTACTCTaGTTCAGCCCTGTCAAACCG +
Preference number: 4 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNCCNVL*FSPVKP
Trigger: CGGTTTGACAGGGCTGAAGCAGAGTACATTGCAGCA...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp TCGCGGGGAGACGTCGCTGTGGTTCAAATGGATCTCACTGTATTCTTGATTTGTTTTCGGAGCTCATTTTaGTGTATGATCGTACAAAGG +
Preference number: 4 (lower is better)
Translates to: SRGDVAVVQMDLTVFLICFRSSF*CMIVQR
Trigger: CCTTTGTACGATCATACAGCAAAATGAGCTCCGAAA...ACAAATCAAGAATACAGTGAGATCCATTTGAACCACAGCGACGTCTCCCCGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CCA 90 bp ATTTGCAATCTGGCTTTGGAGGTAGAATCTCAACATTGTTGTGACCATCATGGGGCCTGCAACTCCTTCTaGATCCGCTTTAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: ICNLALEVESQHCCDHHGACNSF*IRFSFM
Trigger: CATGAAACTAAAGCGGATCCAGAAGGAGTTGCAGGC...CCCATGATGGTCACAACAATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CCA 90 bp ACCTTCTTGATTTGGGCAGTTTGGACTAAGAAAGGGGATGCTACTGGAATTTCCCTGGTCATCTACCTTTaGGGAAACAGCTTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: TFLIWAVWTKKGDATGISLVIYL*GNSLFL
Trigger: CAAGAACAAGCTGTTTCCCCAAAGGTAGATGACCAG...GGAAATTCCAGTAGCATCCCCTTTCTTAGTCCAAACTGCCCAAATCAAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
3UTR CAA 72 bp GGATGCTACTGGAATTTCCACACTGGTCATCTACCTTaGGGGAAACAGCTTGTTCTTGACACTTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GCYWNFHTGHLP*GKQLVLDTFCS
Trigger: AGAACAGAAAGTGTCAAGAACAAGCTGTTTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAGTAGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp TTAACTCTCTGTTTTGGTGCTGAAAGCAGCTGCTCTGGAAGTAATGAGGTTGATAGGGCTTTTTCTCGCTaGAGTTGTTGTCGACTTTTC +
Preference number: 4 (lower is better)
Translates to: LTLCFGAESSCSGSNEVDRAFSR*SCCRLF
Trigger: GAAAAGTCGACAACAACTTCAGCGAGAAAAAGCCCT...ATCAACCTCATTACTTCCAGAGCAGCTGCTTTCAGCACCAAAACAGAGAGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATCCCAGTTCCTTTGGCTaGCTTTCAATGCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHPSSFG*LSMPCG
Trigger: ACCACAGGGCATTGAAAGTCAGCCAAAGGAACTGGG...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp GCTCTGGAAGTAATGAGGTTGATCCATCTTGAAGCCCAAGTTTTTGGCTTTGCTTTCATGGTCTCTGCCTaGGTTCTTTTGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: ALEVMRLIHLEAQVFGFAFMVSA*VLLDLS
Trigger: AGAAAGATCCAAAAGAACTCAGGCAGAGACCATGAA...AGCAAAGCCAAAAACTTGGGCTTCAAGATGGATCAACCTCATTACTTCCAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp AAACGAACCACTGGTCTCCTTGATTCTACTTCTTGTTCGTGTAGCAATCTCTCGTTGGAGGTCAGGGCATaGTCTACTGCAAAAAGTATA +
Preference number: 4 (lower is better)
Translates to: KRTTGLLDSTSCSCSNLSLEVRA*STAKSI
Trigger: TATACTTTTTGCAGTAGATCATGCCCTGACCTCCAA...CGAGAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR GCA 90 bp ATGAAAGCTAAAGTGAGGACTAGACTTCAATCCTATAGGACTATATCAGATATCGACTGCCAACACTGCTaGCCAGCTCATCCGGGTTTT +
Preference number: 4 (lower is better)
Translates to: MKAKVRTRLQSYRTISDIDCQHC*PAHPGF
Trigger: AAAACCCGGATGAGCTGGGCAGCAGTGTTGGCAGTC...GATATCTGATATAGTCCTATAGGATTGAAGTCTAGTCCTCACTTTAGCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CCA 90 bp AAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTACTTTCAATGCCCTGTaGTTGTCCATCACCAACGGG +
Preference number: 4 (lower is better)
Translates to: KHSDVVVYPGLMRHSDSFTFNAL*LSITNG
Trigger: CCCGTTGGTGATGGACAACCACAGGGCATTGAAAGT...AAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CCA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATAGCCGTTGTTCTTGTTaGAGGACTTCCCAACGAGAT +
Preference number: 4 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNSRCSC*RTSQRD
Trigger: ATCTCGTTGGGAAGTCCTCCAACAAGAACAACGGCT...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp TTAACTCTCTGTTTTGGTGCTGAAAGCAGCTGCTCTGGAAGTAATGAGGTTGATATGAATAGTCTAAGCTaGCCTGATCAATCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: LTLCFGAESSCSGSNEVDMNSLS*PDQSGS
Trigger: GGAACCGGATTGATCAGGCCAGCTTAGACTATTCAT...ATCAACCTCATTACTTCCAGAGCAGCTGCTTTCAGCACCAAAACAGAGAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CCA 90 bp ATTTGCAATCTGGCTTTGGAGGTAGAATCTCAACATTGTTGTGACCATCATGGGCTGGAATTTCCACACTaGTCATCTACCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ICNLALEVESQHCCDHHGLEFPH*SSTFGE
Trigger: TTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAG...CCCATGATGGTCACAACAATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATGGGGAGACGTCGCTGTaGTTCAAATGGATCTCACTG +
Preference number: 4 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHGETSL*FKWISL
Trigger: CAGTGAGATCCATTTGAACCACAGCGACGTCTCCCC...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp CATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTCTAAGGGCTTTTTCTCGCTaGAGTTGTTGTCGACTTTTC +
Preference number: 4 (lower is better)
Translates to: HSDVVVYPGLMRHSDSFLRAFSR*SCCRLF
Trigger: GAAAAGTCGACAACAACTTCAGCGAGAAAAAGCCCT...TAGAAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTATCTCTGTTTTGGTGCTaGAAGCAGCTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILSLFWC*KQLLWK
Trigger: CTTCCAGAGCAGCTGCTTTCAGCACCAAAACAGAGA...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATGAGGTGAGAGTGAAATaGCTCGGAAGAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHEVRVK*LGRVGE
Trigger: TTCCCCTACTCTTCCGAGTCATTTCACTCTCACCTC...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp AAACGAACCACTGGTCTCCTTGATTCTACTTCTTGTTCGTGTAGCAATCTCTCGATGTCATTACCTTCTTaGTTTGGGCAGTTTGGACTA +
Preference number: 4 (lower is better)
Translates to: KRTTGLLDSTSCSCSNLSMSLPS*FGQFGL
Trigger: TAGTCCAAACTGCCCAAATCAAGAAGGTAATGACAT...CGAGAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp CTAAGAAAGGGGATGCTACTGGAATTTCCACACTGGTCATCTACCTTTGGGGAAATCTCACTGTATTCTTaGTTTGTAATTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LRKGMLLEFPHWSSTFGEISLYS*FVILCS
Trigger: GGAGCAGAGAATTACAAATCAAGAATACAGTGAGAT...TTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAGTAGCATCCCCTTTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR GCA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACCCAAGTTTTTGGCTTTaGTCTACAAGGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SKVSSSASTSSCCINSSNPSFWL*STRAFS
Trigger: AGAAAAAGCCCTTGTAGAGCAAAGCCAAAAACTTGG...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR GCA 90 bp TATAAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCAATGTCATCTAAAGCCTaGAACTCCTTCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: YKHSDVVVYPGLMRHSDSMSSKA*NSFWIR
Trigger: GCGGATCCAGAAGGAGTTGCAGGCTTTAGATGACAT...TGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR GCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATTGCTGCAATGTACTCTaGTTCAGCCCTGTCAAACCG +
Preference number: 4 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHCCNVL*FSPVKP
Trigger: CGGTTTGACAGGGCTGAAGCAGAGTACATTGCAGCA...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp AGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTACTTTCAATGCCCTGTaGTTGTCCATCACCAACGGG +
Preference number: 4 (lower is better)
Translates to: RGFYWRSGHDLLQKVYFTTFNAL*LSITNG
Trigger: CCCGTTGGTGATGGACAACCACAGGGCATTGAAAGT...AGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp TATAAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCAGCCTGCAACTCCTTCTaGATCCGCTTTAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: YKHSDVVVYPGLMRHSDSACNSF*IRFSFM
Trigger: CATGAAACTAAAGCGGATCCAGAAGGAGTTGCAGGC...TGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CCA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATGAAAGGGGATGCTACTaGAATTTCCACACTGGTCAT +
Preference number: 4 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNERGCY*NFHTGH
Trigger: ATGACCAGTGTGGAAATTCCAGTAGCATCCCCTTTC...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp AAGTCACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCATACCAGAACTTCATGTaGCCAAAGCAGCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: KSLTFSKKGKRNTERTGPYQNFM*PKQLKC
Trigger: ACATTTCAGCTGCTTTGGCCACATGAAGTTCTGGTA...TGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp ATGAAAGCTAAAGTGAGGACTAGACTTCAATCCTATAGGACTATATCAGATATCGAGGTGAGAGTGAAATaGCTCGGAAGAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: MKAKVRTRLQSYRTISDIEVRVK*LGRVGE
Trigger: TTCCCCTACTCTTCCGAGTCATTTCACTCTCACCTC...GATATCTGATATAGTCCTATAGGATTGAAGTCTAGTCCTCACTTTAGCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTGATCAATCCGGTTCCTaGGAATTCCAATGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIIDQSGS*EFQCQL
Trigger: CAGCTGACATTGGAATTCTCAGGAACCGGATTGATC...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp CACAGACTTGGTGTCAGAGTAACAGTTTTGGCGAAACCACTCAGATATTTACTTCAAACATTAAATAGCTaGGGGTTTCGCAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: HRLGVRVTVLAKPLRYLLQTLNS*GFRSKD
Trigger: GTCTTTGCTGCGAAACCCTCAGCTATTTAATGTTTG...AAGTAAATATCTGAGTGGTTTCGCCAAAACTGTTACTCTGACACCAAGTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATGCTCATTTTGCTGTATaGTCGTACAAAGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNAHFAV*SYKGVQ
Trigger: CTGAACACCTTTGTACGATCATACAGCAAAATGAGC...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp GTTCTTGTTGGAGGACTTCCCAACGAGATTTTTCTTGCAATTCCACTTTCTTTTAACCACTGGTCTCCTTaGTTCTACTTCTTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: VLVGGLPNEIFLAIPLSFNHWSP*FYFLFV
Trigger: CACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTT...AAAAGAAAGTGGAATTGCAAGAAAAATCTCGTTGGGAAGTCCTCCAACAAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATGGGCCAAAATCAAGGTaGAACATACCCCTAGAAATA +
Preference number: 4 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNGPKSR*NIPLEI
Trigger: TATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCC...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp AACTGCTCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGTCTTTTTCTCCAATTTaGAATCTGGCTTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: NCSNGTRTRLTSRAELRKSFSPI*NLALEV
Trigger: TACCTCCAAAGCCAGATTGCAAATTGGAGAAAAAGA...CTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGAGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR GCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTATGTCATCTAAAGCCTaGAACTCCTTCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIIMSSKA*NSFWIR
Trigger: GCGGATCCAGAAGGAGTTGCAGGCTTTAGATGACAT...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATGTCATCTAAAGCCTaGAACTCCTTCTGGATCCGC +
Preference number: 4 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHMSSKA*NSFWIR
Trigger: GCGGATCCAGAAGGAGTTGCAGGCTTTAGATGACAT...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTAGGGGAGACGTCGCTGTaGTTCAAATGGATCTTTAGT +
Preference number: 4 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILGETSL*FKWIFS
Trigger: ACTAAAGATCCATTTGAACCACAGCGACGTCTCCCC...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367763.8
CDS-3UTR CCA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTAGCCTGCAACTCCTTCTaGATCCGCTTTAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILACNSF*IRFSFM
Trigger: CATGAAACTAAAGCGGATCCAGAAGGAGTTGCAGGC...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp TATAAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCAATGAATAGTCTAAGCTaGCCTGATCAATCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: YKHSDVVVYPGLMRHSDSMNSLS*PDQSGS
Trigger: GGAACCGGATTGATCAGGCCAGCTTAGACTATTCAT...TGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CCA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATTACCAGAACTTCATGTaGCCAAAGCAGCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNYQNFM*PKQLKC
Trigger: ACATTTCAGCTGCTTTGGCCACATGAAGTTCTGGTA...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTAAGGGCTTTTTCTCGCTaGAGTTGTTGTCGACTTTTC +
Preference number: 4 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILRAFSR*SCCRLF
Trigger: GAAAAGTCGACAACAACTTCAGCGAGAAAAAGCCCT...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp AGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTGAGGTTGATCCATCTTaGAGCCCAAGTTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RGFYWRSGHDLLQKVYFTEVDPS*SPSFWL
Trigger: AAGCCAAAAACTTGGGCTTCAAGATGGATCAACCTC...AGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp TATAAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTCATGGTCTCTGCCTaGGTTCTTTTGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: YKHSDVVVYPGLMRHSDSFMVSA*VLLDLS
Trigger: AGAAAGATCCAAAAGAACTCAGGCAGAGACCATGAA...TGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp AGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTAACCACTGGTCTCCTTaGTTCTACTTCTTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: RGFYWRSGHDLLQKVYFTNHWSP*FYFLFV
Trigger: CACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTT...AGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATTGTGGCCAAAGCAGCTaGAATGTCATTACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHCGQSS*NVITFL
Trigger: CAAGAAGGTAATGACATTTCAGCTGCTTTGGCCACA...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTATGTGGCCAAAGCAGCTaGAATGTCATTACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILCGQSS*NVITFL
Trigger: CAAGAAGGTAATGACATTTCAGCTGCTTTGGCCACA...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp CAGCATTGTTTTAAAGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAGGGCCAAAATCAAGGTaGAACATACCCCTAGAAATA +
Preference number: 4 (lower is better)
Translates to: QHCFKEVFIGGQGMIYCKGPKSR*NIPLEI
Trigger: TATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCC...TTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCTTTAAAACAATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp CATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTCTAAATGGATCTTTAGTCTaGTTTAGTCTCCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HSDVVVYPGLMRHSDSFLNGSLV*FSLLSS
Trigger: GGAACTGAGGAGACTAAAGCAGACTAAAGATCCATT...TAGAAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR GCA 90 bp CATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTCTACCAAGTTTTTGGCTTTaGTCTACAAGGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HSDVVVYPGLMRHSDSFLPSFWL*STRAFS
Trigger: AGAAAAAGCCCTTGTAGAGCAAAGCCAAAAACTTGG...TAGAAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR GCA 90 bp AACTGCTCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGTCTTTTGGATCTTTCTaGAATAGCTTTAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: NCSNGTRTRLTSRAELRKSFGSF*NSFSQK
Trigger: CTTTTGGCTAAAGCTATTGCAGAAAGATCCAAAAGA...CTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGAGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR GCA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACTCTTTTGGATCTTTCTaGAATAGCTTTAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SKVSSSASTSSCCINSSNSFGSF*NSFSQK
Trigger: CTTTTGGCTAAAGCTATTGCAGAAAGATCCAAAAGA...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR GCA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATAGGTGTTCAGTGAGTTaGTCTTTTATCTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNRCSVS*SFISVL
Trigger: CAAGACTGAGATAAAAGAGCAACTCACTGAACACCT...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp ATGAAAGCTAAAGTGAGGACTAGACTTCAATCCTATAGGACTATATCAGATATCGGGGAGACGTCGCTGTaGTTCAAATGGATCTTTAGT +
Preference number: 4 (lower is better)
Translates to: MKAKVRTRLQSYRTISDIGETSL*FKWIFS
Trigger: ACTAAAGATCCATTTGAACCACAGCGACGTCTCCCC...GATATCTGATATAGTCCTATAGGATTGAAGTCTAGTCCTCACTTTAGCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CCA 90 bp ATGAAAGCTAAAGTGAGGACTAGACTTCAATCCTATAGGACTATATCAGATATCAGCCGTTGTTCTTGTTaGAGGACTTCCCAACGAGAT +
Preference number: 4 (lower is better)
Translates to: MKAKVRTRLQSYRTISDISRCSC*RTSQRD
Trigger: ATCTCGTTGGGAAGTCCTCCAACAAGAACAACGGCT...GATATCTGATATAGTCCTATAGGATTGAAGTCTAGTCCTCACTTTAGCTTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTATGAATAGTCTAAGCTaGCCTGATCAATCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIIMNSLS*PDQSGS
Trigger: GGAACCGGATTGATCAGGCCAGCTTAGACTATTCAT...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATACTCCTCCAACTTCTTaGCCTTTCGGAGCTCATTTT +
Preference number: 4 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHTPPTS*PFGAHF
Trigger: AAAATGAGCTCCGAAAGGCCAAGAAGTTGGAGGAGT...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATCTGGTCATCTACCTTTaGGGAAACAGCTTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHLVIYL*GNSLFL
Trigger: CAAGAACAAGCTGTTTCCCCAAAGGTAGATGACCAG...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTCTGGAATTTCCACACTaGTCATCTACCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIILEFPH*SSTFGE
Trigger: TTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAG...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp AGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTGAAAGGGGATGCTACTaGAATTTCCACACTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RGFYWRSGHDLLQKVYFTERGCY*NFHTGH
Trigger: ATGACCAGTGTGGAAATTCCAGTAGCATCCCCTTTC...AGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp ATGAAAGCTAAAGTGAGGACTAGACTTCAATCCTATAGGACTATATCAGATATCGAGGTTGATCCATCTTaGAGCCCAAGTTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: MKAKVRTRLQSYRTISDIEVDPS*SPSFWL
Trigger: AAGCCAAAAACTTGGGCTTCAAGATGGATCAACCTC...GATATCTGATATAGTCCTATAGGATTGAAGTCTAGTCCTCACTTTAGCTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTTTCATGGTCTCTGCCTaGGTTCTTTTGGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIIFMVSA*VLLDLS
Trigger: AGAAAGATCCAAAAGAACTCAGGCAGAGACCATGAA...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp AGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTGCTCATTTTGCTGTATaGTCGTACAAAGGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RGFYWRSGHDLLQKVYFTAHFAV*SYKGVQ
Trigger: CTGAACACCTTTGTACGATCATACAGCAAAATGAGC...AGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTTTGGAGGTCAGGGCATaGTCTACTGCAAAAAGTATA +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIILEVRA*STAKSI
Trigger: TATACTTTTTGCAGTAGATCATGCCCTGACCTCCAA...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATTCTTTTTCTCCAATTTaGAATCTGGCTTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNSFSPI*NLALEV
Trigger: TACCTCCAAAGCCAGATTGCAAATTGGAGAAAAAGA...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CCA 90 bp AAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTAAATACAGCACTGAATaGGGTTGTTTTGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KHSDVVVYPGLMRHSDSFKYSTE*GCFEAS
Trigger: TGAAGCCTCAAAACAACCCCATTCAGTGCTGTATTT...AAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CCA 90 bp CATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTCTAGAAAGAACACAGACTTaGTGTCAGAGTAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: HSDVVVYPGLMRHSDSFLERTQT*CQSNSF
Trigger: AAAACTGTTACTCTGACACCAAGTCTGTGTTCTTTC...TAGAAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp ATGAAAGCTAAAGTGAGGACTAGACTTCAATCCTATAGGACTATATCAGATATCCACAGCATTCCCTTGTaGAAAAAGACAAACCAGGAT +
Preference number: 4 (lower is better)
Translates to: MKAKVRTRLQSYRTISDIHSIPL*KKTNQD
Trigger: ATCCTGGTTTGTCTTTTTTCACAAGGGAATGCTGTG...GATATCTGATATAGTCCTATAGGATTGAAGTCTAGTCCTCACTTTAGCTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp AAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTCCTAATGAGGCATTCTaGTTCATTTCTAGTGTAACA +
Preference number: 4 (lower is better)
Translates to: KHSDVVVYPGLMRHSDSFPNEAF*FISSVT
Trigger: TGTTACACTAGAAATGAATCAGAATGCCTCATTAGG...AAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR TCA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTAATGTCATTACCTTCTTaGTTTGGGCAGTTTGGACTA +
Preference number: 4 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILMSLPS*FGQFGL
Trigger: TAGTCCAAACTGCCCAAATCAAGAAGGTAATGACAT...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTAAATGGATCTTTAGTCTaGTTTAGTCTCCTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILNGSLV*FSLLSS
Trigger: GGAACTGAGGAGACTAAAGCAGACTAAAGATCCATT...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367763.8
CDS-3UTR GCA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTACCAAGTTTTTGGCTTTaGTCTACAAGGGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILPSFWL*STRAFS
Trigger: AGAAAAAGCCCTTGTAGAGCAAAGCCAAAAACTTGG...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTAGGTGTTCAGTGAGTTaGTCTTTTATCTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIIRCSVS*SFISVL
Trigger: CAAGACTGAGATAAAAGAGCAACTCACTGAACACCT...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATTTTCGGAGCTCATTTTaGTGTATGATCGTACAAAGG +
Preference number: 4 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHFRSSF*CMIVQR
Trigger: CCTTTGTACGATCATACAGCAAAATGAGCTCCGAAA...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
3UTR CAA 72 bp ATTCCACTTTCTTTTTCTCCAATTTGCAATCTGGCTTaGGAGGTAGAATCTCAACATTGTTGTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: IPLSFSPICNLA*EVESQHCCDHH
Trigger: ATGATGGTCACAACAATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAATTGGAGAAAAAGAAAGTGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR TCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTAATTTAAACGCTTCATaGCAGGGTAATTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIINLNAS*QGNSCP
Trigger: TGGACATGAATTACCCTGTCATGAAGCGTTTAAATT...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR TCA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTAAATTTAAACGCTTCATaGCAGGGTAATTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILNLNAS*QGNSCP
Trigger: TGGACATGAATTACCCTGTCATGAAGCGTTTAAATT...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR GCA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTTCTTTTGGATCTTTCTaGAATAGCTTTAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIISFGSF*NSFSQK
Trigger: CTTTTGGCTAAAGCTATTGCAGAAAGATCCAAAAGA...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
3UTR CAA 72 bp CAAATTGAAGACAAAAGTGATGCTGGTTTAAGTTGTTaGGTTCTTCACATAAATTCCAGTTTCCAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: QIEDKSDAGLSC*VLHINSSFQVV
Trigger: CACAACTTGGAAACTGGAATTTATGTGAAGAACCAAACAACTTAAACCAGCATCACTTTTGTCTTCAATTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS GCA 90 bp GCCCAACCTTGCGCCATCGGCCCGGGCCACCGGCACCCCCAAAAGTaGCCAAATCTCGCAGCCGCGACTGCCAACACTGCTGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: AQPCAIGPGHRHPQK*PNLAAATANTAAQL
Trigger: GAGCTGGGCAGCAGTGTTGGCAGTCGCGGCTGCGAGATTTGGGCACTTTTGGGGGTGCCGGTGGCCCGGGCCGATGGCGCAAGGTTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367762.2
ENST00000498166.6
CDS-3UTR CAA 90 bp GCTTTGCTGCAATGTACTCTGCTTCAGCCCTGTCAAACCGCTTCCGAGCGTATGGAATCCTGCCCAACCTaGCGCCATCGGCCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: ALLQCTLLQPCQTASERMESCPT*RHRPGP
Trigger: TGGCCCGGGCCGATGGCGCAAGGTTGGGCAGGATTC...CATACGCTCGGAAGCGGTTTGACAGGGCTGAAGCAGAGTACATTGCAGCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGACTTCAGAATCCTGCCCAACCTaGCGCCATCGGCCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: SNGTRTRLTSRAELRKTSESCPT*RHRPGP
Trigger: TGGCCCGGGCCGATGGCGCAAGGTTGGGCAGGATTC...TGAAGTCTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATGAATCCTGCCCAACCTaGCGCCATCGGCCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNESCPT*RHRPGP
Trigger: TGGCCCGGGCCGATGGCGCAAGGTTGGGCAGGATTC...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp GCTTTGCTGCAATGTACTCTGCTTCAGCCCTGTCAAACCGCTTCCGAGCGTATGGAACCACTGGTCTCCTaGATTCTACTTCTTGTTCGT +
Preference number: 5 (lower is better)
Translates to: ALLQCTLLQPCQTASERMEPLVS*ILLLVR
Trigger: ACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTC...CATACGCTCGGAAGCGGTTTGACAGGGCTGAAGCAGAGTACATTGCAGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACTTCAATGCCCTGTGGTaGTCCATCACCAACGGGGGA +
Preference number: 5 (lower is better)
Translates to: SKVSSSASTSSCCINSSNFNALW*SITNGG
Trigger: TCCCCCGTTGGTGATGGACAACCACAGGGCATTGAA...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TTTCTCGCTGAAGTTGTTGTCGACTTTTCTTCGCGGGGAGACGTCGCTGTGGTTAGAGTGAGGTTCCTCTaGTCTCTGAAGCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: FLAEVVVDFSSRGDVAVVRVRFL*SLKQVL
Trigger: AAGAACTTGCTTCAGAGACAAGAGGAACCTCACTCT...AACCACAGCGACGTCTCCCCGCGAAGAAAAGTCGACAACAACTTCAGCGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS TCA 90 bp ACCGAGCGTATGAATAGTCTAAGCTGGCCTGATCAATCCGGTTCCTaGGAATTCCAATGTCAGCTGACACCATGTCATCTAAAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: TERMNSLSWPDQSGS*EFQCQLTPCHLKPA
Trigger: TGCAGGCTTTAGATGACATGGTGTCAGCTGACATTGGAATTCTCAGGAACCGGATTGATCAGGCCAGCTTAGACTATTCATACGCTCGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp AAACGAACCACTGGTCTCCTTGATTCTACTTCTTGTTCGTGTAGCAATCTCTCGCAGAGGCCAGGGCACTaGTACCCTTTAGTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: KRTTGLLDSTSCSCSNLSQRPGH*YPLVCF
Trigger: AAAGCAGACTAAAGGGTACAAGTGCCCTGGCCTCTG...CGAGAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TTCCTGAGAATTCCAATGTCAGCTGACACCATGTCATCTAAAGCCTGCAACTCCTTGAAGCCCAAGTTTTaGGCTTTGCTCTACAAGGGC +
Preference number: 5 (lower is better)
Translates to: FLRIPMSADTMSSKACNSLKPKF*ALLYKG
Trigger: GCCCTTGTAGAGCAAAGCCAAAAACTTGGGCTTCAA...GGAGTTGCAGGCTTTAGATGACATGGTGTCAGCTGACATTGGAATTCTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp AACTGCTCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGTTGAAGCCCAAGTTTTaGGCTTTGCTCTACAAGGGC +
Preference number: 5 (lower is better)
Translates to: NCSNGTRTRLTSRAELRKLKPKF*ALLYKG
Trigger: GCCCTTGTAGAGCAAAGCCAAAAACTTGGGCTTCAA...CTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp TTCCTGAGAATTCCAATGTCAGCTGACACCATGTCATCTAAAGCCTGCAACTCCCTGGAAGTAATGAGGTaGATCCATCTTGAAGCCCAA +
Preference number: 5 (lower is better)
Translates to: FLRIPMSADTMSSKACNSLEVMR*IHLEAQ
Trigger: TTGGGCTTCAAGATGGATCAACCTCATTACTTCCAG...GGAGTTGCAGGCTTTAGATGACATGGTGTCAGCTGACATTGGAATTCTCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TATAAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTCAATGCCCTGTGGTaGTCCATCACCAACGGGGGA +
Preference number: 5 (lower is better)
Translates to: YKHSDVVVYPGLMRHSDSFNALW*SITNGG
Trigger: TCCCCCGTTGGTGATGGACAACCACAGGGCATTGAA...TGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTATTCAATGCCCTGTGGTaGTCCATCACCAACGGGGGA +
Preference number: 5 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILFNALW*SITNGG
Trigger: TCCCCCGTTGGTGATGGACAACCACAGGGCATTGAA...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp TTCCTGAGAATTCCAATGTCAGCTGACACCATGTCATCTAAAGCCTGCAACTCCCTTTCGGAGCTCATTTaGCTGTATGATCGTACAAAG +
Preference number: 5 (lower is better)
Translates to: FLRIPMSADTMSSKACNSLSELI*LYDRTK
Trigger: CTTTGTACGATCATACAGCAAAATGAGCTCCGAAAG...GGAGTTGCAGGCTTTAGATGACATGGTGTCAGCTGACATTGGAATTCTCAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp AAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTTTCTCGCTGAAGTTGTaGTCGACTTTTCTTCGCGGG +
Preference number: 5 (lower is better)
Translates to: KHSDVVVYPGLMRHSDSFFSLKL*STFLRG
Trigger: CCCGCGAAGAAAAGTCGACAACAACTTCAGCGAGAA...AAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp CAGCATTGTTTTAAAGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAATTCTCGCTGAAGTTGTaGTCGACTTTTCTTCGCGGG +
Preference number: 5 (lower is better)
Translates to: QHCFKEVFIGGQGMIYCKFSLKL*STFLRG
Trigger: CCCGCGAAGAAAAGTCGACAACAACTTCAGCGAGAA...TTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCTTTAAAACAATGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACTTTTTCTCGCTGAAGTaGTTGTCGACTTTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: SKVSSSASTSSCCINSSNFFSLK*LSTFLR
Trigger: GCGAAGAAAAGTCGACAACAACTTCAGCGAGAAAAA...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp AAGTCACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCACCCAAGTTTTTGGCTTaGCTCTACAAGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KSLTFSKKGKRNTERTGPPKFLA*LYKGFF
Trigger: GAAAAAGCCCTTGTAGAGCAAAGCCAAAAACTTGGG...TGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp TCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGACTTCACTGGAAGTAATGAGGTaGATCCATCTTGAAGCCCAA +
Preference number: 5 (lower is better)
Translates to: SNGTRTRLTSRAELRKTSLEVMR*IHLEAQ
Trigger: TTGGGCTTCAAGATGGATCAACCTCATTACTTCCAG...TGAAGTCTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp CTAAGAAAGGGGATGCTACTGGAATTTCCACACTGGTCATCTACCTTTGGGGAAATTTGCAATCTGGCTTaGGAGGTAGAATCTCAACAT +
Preference number: 5 (lower is better)
Translates to: LRKGMLLEFPHWSSTFGEICNLA*EVESQH
Trigger: ATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAAT...TTCCCCAAAGGTAGATGACCAGTGTGGAAATTCCAGTAGCATCCCCTTTCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TTAACTCTCTGTTTTGGTGCTGAAAGCAGCTGCTCTGGAAGTAATGAGGTTGATACTGGTCATCTACCTTaGGGGAAACAGCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: LTLCFGAESSCSGSNEVDTGHLP*GKQLVL
Trigger: AAGAACAAGCTGTTTCCCCAAAGGTAGATGACCAGT...ATCAACCTCATTACTTCCAGAGCAGCTGCTTTCAGCACCAAAACAGAGAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TCTAATGGCACACGAACAAGGTTAACTAGTAGGGCAGAGTTAAGGAAGACTTCATTTTTCTCGCTGAAGTaGTTGTCGACTTTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: SNGTRTRLTSRAELRKTSFFSLK*LSTFLR
Trigger: GCGAAGAAAAGTCGACAACAACTTCAGCGAGAAAAA...TGAAGTCTTCCTTAACTCTGCCCTACTAGTTAACCTTGTTCGTGTGCCATTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp CATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTCTACCCAAGTTTTTGGCTTaGCTCTACAAGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: HSDVVVYPGLMRHSDSFLPKFLA*LYKGFF
Trigger: GAAAAAGCCCTTGTAGAGCAAAGCCAAAAACTTGGG...TAGAAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATCTGGAAGTAATGAGGTaGATCCATCTTGAAGCCCAA +
Preference number: 5 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNLEVMR*IHLEAQ
Trigger: TTGGGCTTCAAGATGGATCAACCTCATTACTTCCAG...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATGAACCACTGGTCTCCTaGATTCTACTTCTTGTTCGT +
Preference number: 5 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNEPLVS*ILLLVR
Trigger: ACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTC...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AAGTCACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCACTTTGGGGAAACAGCTaGTTCTTGACACTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: KSLTFSKKGKRNTERTGPLWGNS*FLTLSV
Trigger: AACAGAAAGTGTCAAGAACAAGCTGTTTCCCCAAAG...TGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp GTTCTTGTTGGAGGACTTCCCAACGAGATTTTTCTTGCAATTCCACTTTCTTTTGTAATTCTCTGCTCCTaGGTGGTGATGAGCATCTCT +
Preference number: 5 (lower is better)
Translates to: VLVGGLPNEIFLAIPLSFVILCS*VVMSIS
Trigger: AGAGATGCTCATCACCACCAAGGAGCAGAGAATTAC...AAAAGAAAGTGGAATTGCAAGAAAAATCTCGTTGGGAAGTCCTCCAACAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp CACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAAATTTTTTCTCGCTGAAGTaGTTGTCGACTTTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: HLLSVKRVNGTLKEPGQNFFSLK*LSTFLR
Trigger: GCGAAGAAAAGTCGACAACAACTTCAGCGAGAAAAA...ATTTTGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp CAGCATTGTTTTAAAGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAACCCAAGTTTTTGGCTTaGCTCTACAAGGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: QHCFKEVFIGGQGMIYCKPKFLA*LYKGFF
Trigger: GAAAAAGCCCTTGTAGAGCAAAGCCAAAAACTTGGG...TTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCTTTAAAACAATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTTTGAAGCCCAAGTTTTaGGCTTTGCTCTACAAGGGC +
Preference number: 5 (lower is better)
Translates to: RGFYWRSGHDLLQKVYFTLKPKF*ALLYKG
Trigger: GCCCTTGTAGAGCAAAGCCAAAAACTTGGGCTTCAA...AGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AAGTCACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCATTCTTTTTCTCCAATTaGCAATCTGGCTTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KSLTFSKKGKRNTERTGPFFFSN*QSGFGG
Trigger: ACCTCCAAAGCCAGATTGCAAATTGGAGAAAAAGAA...TGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AAACGAACCACTGGTCTCCTTGATTCTACTTCTTGTTCGTGTAGCAATCTCTCGTCTTTTATCTCAGTCTaGCGCTGTATATCTAGCTTT +
Preference number: 5 (lower is better)
Translates to: KRTTGLLDSTSCSCSNLSSFISV*RCISSF
Trigger: AAAGCTAGATATACAGCGCAAGACTGAGATAAAAGA...CGAGAGATTGCTACACGAACAAGAAGTAGAATCAAGGAGACCAGTGGTTCGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp AAGTCACTTACTTTCAGTAAAAAGGGTAAACGGAACACTGAAAGAACCGGGCCAAATGTCATTACCTTCTaGATTTGGGCAGTTTGGACT +
Preference number: 5 (lower is better)
Translates to: KSLTFSKKGKRNTERTGPNVITF*IWAVWT
Trigger: AGTCCAAACTGCCCAAATCAAGAAGGTAATGACATT...TGGCCCGGTTCTTTCAGTGTTCCGTTTACCCTTTTTACTGAAAGTAAGTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp TTAACTCTCTGTTTTGGTGCTGAAAGCAGCTGCTCTGGAAGTAATGAGGTTGATAATGTCATTACCTTCTaGATTTGGGCAGTTTGGACT +
Preference number: 5 (lower is better)
Translates to: LTLCFGAESSCSGSNEVDNVITF*IWAVWT
Trigger: AGTCCAAACTGCCCAAATCAAGAAGGTAATGACATT...ATCAACCTCATTACTTCCAGAGCAGCTGCTTTCAGCACCAAAACAGAGAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TCCAAAGTCTCTTCATCGGCTTCTACATCTAGTTGTTGCATCAACTCCTCCAACGCTGGTTTAAGTTGTTaGGTTCTTCACATAAATTCC +
Preference number: 5 (lower is better)
Translates to: SKVSSSASTSSCCINSSNAGLSC*VLHINS
Trigger: GGAATTTATGTGAAGAACCAAACAACTTAAACCAGC...GTTGGAGGAGTTGATGCAACAACTAGATGTAGAAGCCGATGAAGAGACTTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TATAAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCAGTCAGAGTAACAGTTTaGGCGAAACCACTCAGATAT +
Preference number: 5 (lower is better)
Translates to: YKHSDVVVYPGLMRHSDSVRVTV*AKPLRY
Trigger: ATATCTGAGTGGTTTCGCCAAAACTGTTACTCTGAC...TGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp CAGCATTGTTTTAAAGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAGCTGTATATCTAGCTTaGCTGCAATGTACTCTGCTT +
Preference number: 5 (lower is better)
Translates to: QHCFKEVFIGGQGMIYCKAVYLA*LQCTLL
Trigger: AAGCAGAGTACATTGCAGCAAAGCTAGATATACAGC...TTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCTTTAAAACAATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTACTGGTCATCTACCTTaGGGGAAACAGCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: RGFYWRSGHDLLQKVYFTTGHLP*GKQLVL
Trigger: AAGAACAAGCTGTTTCCCCAAAGGTAGATGACCAGT...AGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AAACATTCTGATGTTGTGGTTTACCCTGGCCTAATGAGGCATTCTGATTCATTTATTTGCAATCTGGCTTaGGAGGTAGAATCTCAACAT +
Preference number: 5 (lower is better)
Translates to: KHSDVVVYPGLMRHSDSFICNLA*EVESQH
Trigger: ATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAAT...AAATGAATCAGAATGCCTCATTAGGCCAGGGTAAACCACAACATCAGAATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp CAGCATTGTTTTAAAGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAATTTGCAATCTGGCTTaGGAGGTAGAATCTCAACAT +
Preference number: 5 (lower is better)
Translates to: QHCFKEVFIGGQGMIYCKICNLA*EVESQH
Trigger: ATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAAT...TTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCTTTAAAACAATGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AGAGGTTTTTATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTGCTGTATATCTAGCTTaGCTGCAATGTACTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RGFYWRSGHDLLQKVYFTAVYLA*LQCTLL
Trigger: AAGCAGAGTACATTGCAGCAAAGCTAGATATACAGC...AGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATAAAAACCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTCTTTCGGAGCTCATTTaGCTGTATGATCGTACAAAG +
Preference number: 5 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIILSELI*LYDRTK
Trigger: CTTTGTACGATCATACAGCAAAATGAGCTCCGAAAG...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp GGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATATTATTGTTGACTTTTCTTTaGTCCTGGAAAATGCGCCTC +
Preference number: 5 (lower is better)
Translates to: GGQGMIYCKKYTLLNTILLLTFL*SWKMRL
Trigger: GAGGCGCATTTTCCAGGACAAAAGAAAAGTCAACAA...TAATATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS-3UTR CAA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATTTCTTTTTCTCCAATTaGCAATCTGGCTTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHFFFSN*QSGFGG
Trigger: ACCTCCAAAGCCAGATTGCAAATTGGAGAAAAAGAA...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTGGAAACAGCTTGTTCTaGACACTTTCTGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIIGNSLF*TLSVLF
Trigger: AAAGAGAACAGAAAGTGTCAAGAACAAGCTGTTTCC...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp ATGAAAGCTAAAGTGAGGACTAGACTTCAATCCTATAGGACTATATCAGATATCTTCTTTTTCTCCAATTaGCAATCTGGCTTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: MKAKVRTRLQSYRTISDIFFFSN*QSGFGG
Trigger: ACCTCCAAAGCCAGATTGCAAATTGGAGAAAAAGAA...GATATCTGATATAGTCCTATAGGATTGAAGTCTAGTCCTCACTTTAGCTTTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367762.2
CDS-3UTR CAA 90 bp TATTGGAGGTCAGGGCATGATCTACTGCAAAAAGTATACTTTACTCAATACCATTCTTTTATCTCAGTCTaGCGCTGTATATCTAGCTTT +
Preference number: 5 (lower is better)
Translates to: YWRSGHDLLQKVYFTQYHSFISV*RCISSF
Trigger: AAAGCTAGATATACAGCGCAAGACTGAGATAAAAGA...ATGGTATTGAGTAAAGTATACTTTTTGCAGTAGATCATGCCCTGACCTCCAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTGCTGGTTTAAGTTGTTaGGTTCTTCACATAAATTCC +
Preference number: 5 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIIAGLSC*VLHINS
Trigger: GGAATTTATGTGAAGAACCAAACAACTTAAACCAGC...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367763.8
ENST00000498166.6
CDS-3UTR CAA 90 bp AACCGGGCCAAAATCAAGGTGAAACATACCCCTAGAAATACAGTTATCATAATTGATCTCACTGTATTCTaGATTTGTAATTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: NRAKIKVKHTPRNTVIIIDLTVF*ICNSLL
Trigger: GAGCAGAGAATTACAAATCAAGAATACAGTGAGATC...AATTATGATAACTGTATTTCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS TCA 72 bp CCTGGAAAATGCGCCTCTGCTAACACACAAACTTTGTaGAATCTTCCCAAGCTCCATCCAATCCCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: PGKCASANTQTL*NLPKLHPIPGR
Trigger: TCTGCCGGGGATTGGATGGAGCTTGGGAAGATTTCACAAAGTTTGTGTGTTAGCAGAGGCGCATTTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS CAA 72 bp AAGCTCCATCCAATCCCCGGCAGAGTGAGGTTCCTCTaGTCTCTGAAGCAAGTTCTTGCAATATCTACTATC +
Preference number: 6 (lower is better)
Translates to: KLHPIPGRVRFL*SLKQVLAISTI
Trigger: GATAGTAGATATTGCAAGAACTTGCTTCAGAGACAAGAGGAACCTCACTCTGCCGGGGATTGGATGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498166.6
CDS TCA 72 bp TCCTTCTGGATCCGCTTTAGTTTCATGGTCTCTGCCTaGGTTCTTTTGGATCTAGAAAATCAGGTATGTGAG +
Preference number: 6 (lower is better)
Translates to: SFWIRFSFMVSA*VLLDLENQVCE
Trigger: CTCACATACCTGATTTTCTAGATCCAAAAGAACTCAGGCAGAGACCATGAAACTAAAGCGGATCCAGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475113.1
CDS CAA 90 bp TTACTAACAATTCCACTTTCTTTTTCTCCAATTTGCAATCTGGCTTaGGAGGTAGAATCTCAACATTGTTGTGACCATCATGGGAATTCT +
Preference number: 6 (lower is better)
Translates to: LLTIPLSFSPICNLA*EVESQHCCDHHGNS
Trigger: AGAATTCCCATGATGGTCACAACAATGTTGAGATTCTACCTCCAAAGCCAGATTGCAAATTGGAGAAAAAGAAAGTGGAATTGTTAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465717.1