Pregenerated sensors for GOLT1A (Homo sapiens)
Ensembl gene IDs: ENSG00000174567Ensembl transcript IDs: ENST00000308302.4, ENST00000475517.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTaGTCAGCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATA | + |
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Preference number: 1 (lower is better) Translates to: ASWQPLESTWGFDVS*SAPFLPSGLGEVRI Trigger: TATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| 3UTR CCA 90 bp | CTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTaGGGATTTGACGTCAGTTGCTCAGCTCCATTCCTTCCTTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LGVCISASWQPLEST*GFDVSCSAPFLPSG Trigger: TCCAGAAGGAAGGAATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| 3UTR CAA 90 bp | AGCCCAGTCTCCTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTaGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: SPVSLGSASLLPGSL*SRLGDLTSVAQLHS Trigger: GGAATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAGGAGACTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| 3UTR-3UTR TCA 90 bp | AGTCTCCTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGAGCCCCCTCAACCAATaGTCCAAGTTCAAGGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SLLGVCISASWQPLESTWSPLNQ*SKFKEL Trigger: GAGCTCCTTGAACTTGGATCATTGGTTGAGGGGGCT...CCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAGGAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| 3UTR CAA 90 bp | TCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTaGACGTCAGTTGCTCAGCTCCATTCCTTCCTTCTGGACTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SASLLPGSLLSRLGD*TSVAQLHSFLLDLG Trigger: CCCCAAGTCCAGAAGGAAGGAATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGGTCCTTCCTTCTGGACTaGGGGAGGTCCGGATATGTC | + |
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Preference number: 3 (lower is better) Translates to: VSLGSASLLPGSLLSRLGSFLLD*GRSGYV Trigger: GACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGA...CCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| 3UTR CCA 72 bp | TGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTaGGGATTTGACGTCAGTTGCTCAGCTCCATTCCTT | + |
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Preference number: 3 (lower is better) Translates to: CISASWQPLEST*GFDVSCSAPFL Trigger: AAGGAATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CCA 90 bp | CTCAGCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATATGTCGGGGAGTCGGGCAAGTGGAGCGTaGCCCAGAGGACGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSSIPSFWTWGGPDMSGSRASGA*PRGRSW Trigger: CCAGCTGCGTCCTCTGGGCCACGCTCCACTTGCCCG...ACTCCCCGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCATGTGGAAGCGGGCAAGTaGAGCGTGGCCCAGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: PGSLLSRLGDLTSVAQLHVEAGK*SVAQRT Trigger: CGTCCTCTGGGCCACGCTCCACTTGCCCGCTTCCAC...ATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CCA 90 bp | TCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCAATGCCGCACTCAGCCTaGGGGGCTTTCCGGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SWQPLESTWGFDVSCSAPMPHSA*GAFRVE Trigger: TTCCACCCGGAAAGCCCCCCAGGCTGAGTGCGGCAT...TGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR GCA 90 bp | CTCAGCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATATGTCGGGGAGTAGGTTTCCAGGAACATaGCGAGGAGGGGCCAGCGTA | + |
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Preference number: 4 (lower is better) Translates to: LSSIPSFWTWGGPDMSGSRFPGT*RGGASV Trigger: TACGCTGGCCCCTCCTCGGCATGTTCCTGGAAACCT...ACTCCCCGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR TCA 90 bp | GCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATATGTCGGGGAGTGAGTATCGAGCTAGTGCCTTaGAGTCTCCGGAACAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: APFLPSGLGEVRICRGVSIELVP*SLRNSA Trigger: TGCGCTGTTCCGGAGACTTCAAGGCACTAGCTCGAT...ACTCACTCCCCGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR TCA 90 bp | AGTCTCCTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGTATAGAGTGAGGGTGTaGTACCAGCCCCAGCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SLLGVCISASWQPLESTWYRVRV*YQPQPS Trigger: ACTGGGCTGGGGCTGGTATCACACCCTCACTCTATA...CCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAGGAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR GCA 90 bp | AGCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATATGTCGGGGAGTGAGGGATGTTGCAGACATTaGCCAGGAAGCCGAAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: SSIPSFWTWGGPDMSGSEGCCRH*PGSRRR Trigger: TCGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCC...CTCACTCCCCGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CCA 90 bp | AGTCTCCTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGCCTTCCTTCTGGACTTaGGGAGGTCCGGATATGTCG | + |
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Preference number: 4 (lower is better) Translates to: SLLGVCISASWQPLESTWPSFWT*GGPDMS Trigger: CGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGG...CCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAGGAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR TCA 90 bp | GCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATATGTCGGGGAGTGAGTAGATGCCGAAACCGGTaGTCCCCACACCAATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: APFLPSGLGEVRICRGVSRCRNR*SPHQSS Trigger: AGAAGATTGGTGTGGGGATCACCGGTTTCGGCATCT...ACTCACTCCCCGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR TCA 90 bp | CCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCATGTCGACTTGGGGATTTaGCGTCAGTTGCTCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PGSLLSRLGDLTSVAQLHVDLGI*RQLLSS Trigger: GGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGAC...ATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR GCA 90 bp | CTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTAGTCTCCTTGGGGTCTaGATCTCTGCTTCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGVCISASWQPLESTWGFSLLGV*ISASWQ Trigger: CTGCCAGGAAGCAGAGATGCAGACCCCAAGGAGACT...AAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| 3UTR CAA 72 bp | TCCTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTaGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SLGSASLLPGSL*SRLGDLTSVAQ Trigger: CTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR TCA 90 bp | CCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCATTCTTCTGCCATTCGGTaGTGGAGATCATGCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: PGSLLSRLGDLTSVAQLHSSAIR*WRSCRT Trigger: AGTGCGGCATGATCTCCATCACCGAATGGCAGAAGA...ATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR TCA 90 bp | GCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATATGTCGGGGAGTGAGTGTGTTCCAAAGAGGATaGAGAAGATGCCGAAACCGG | + |
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Preference number: 4 (lower is better) Translates to: APFLPSGLGEVRICRGVSVFQRG*RRCRNR Trigger: CCGGTTTCGGCATCTTCTTCATCCTCTTTGGAACAC...ACTCACTCCCCGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR TCA 90 bp | TCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCAGGAAGCTGGTTCCCTTaGGTTTGTGCCGTTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SWQPLESTWGFDVSCSAPGSWFP*VCAVGR Trigger: TCTTCCAACGGCACAAACTCAAGGGAACCAGCTTCC...TGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CCA 90 bp | CTCAGCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATATGTCGGGGAGTCCTCTTGAGTCGACTTaGGGATTTGACGTCAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSSIPSFWTWGGPDMSGSPLEST*GFDVSC Trigger: GCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGG...ACTCCCCGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CCA 90 bp | GCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTTGCATCTCTGCTTCCTaGCAGCCTCTTGAGTCGACT | + |
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Preference number: 4 (lower is better) Translates to: ASWQPLESTWGFDVSCSACISAS*QPLEST Trigger: AGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCA...AGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| 3UTR CAA 72 bp | CTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTaGACGTCAGTTGCTCAGCTCCATTCCTTCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLPGSLLSRLGD*TSVAQLHSFLL Trigger: CAGAAGGAAGGAATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR TCA 90 bp | TCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAAGCCCCCTCAACCAATaGTCCAAGTTCAAGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SASLLPGSLLSRLGDLTSSPLNQ*SKFKEL Trigger: GAGCTCCTTGAACTTGGATCATTGGTTGAGGGGGCT...TGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR TCA 90 bp | GCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCCATAAATATAGAGTaGGGGTGTGATACCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: ASWQPLESTWGFDVSCSAPINIE*GCDTSP Trigger: GGGGCTGGTATCACACCCTCACTCTATATTTATGGG...AGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR GCA 90 bp | AGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCATTCCTTCCCAGGAAGGGGATGTTaGAGACATTGCCCAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SLLSRLGDLTSVAQLHSFPGRGC*RHCPGS Trigger: GCTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGG...GAAGGAATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CCA 90 bp | AGCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATATGTCGGGGAGTGAGTTGAGTTTGTGCCGTTaGAAGAAGAACCAAAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SSIPSFWTWGGPDMSGSELSLCR*KKNQKV Trigger: GACCTTTTGGTTCTTCTTCCAACGGCACAAACTCAA...CTCACTCCCCGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR GCA 90 bp | CTCCCTCTAGCCCCCTCAACCAATGATCCAAGTTCAAGGAGCTCATCTCTGTTTGGATTTGACGTCAGTTaGTCAGCTCCATTCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LPLAPSTNDPSSRSSSLFGFDVS*SAPFLP Trigger: AGGAAGGAATGGAGCTGAGCAACTGACGTCAAATCC...AAACAGAGATGAGCTCCTTGAACTTGGATCATTGGTTGAGGGGGCTAGAGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR GCA 90 bp | CTCCCTCTAGCCCCCTCAACCAATGATCCAAGTTCAAGGAGCTCATCTCTGTTTGTTCCCTTGAGTTTGTaGCGTTGGAAGAAGAACCAA | + |
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Preference number: 4 (lower is better) Translates to: LPLAPSTNDPSSRSSSLFVPLSL*RWKKNQ Trigger: TTGGTTCTTCTTCCAACGGCACAAACTCAAGGGAAC...AAACAGAGATGAGCTCCTTGAACTTGGATCATTGGTTGAGGGGGCTAGAGGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS CCA 90 bp | CCAATCTTCTGCCATTCGGTGATGGAGATCATGCCGCACTCAGCCTaGGGGGCTTTCCGGGTGGAAGCGGGCAAGTGGAGCGTGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PIFCHSVMEIMPHSA*GAFRVEAGKWSVAQ Trigger: CTGGGCCACGCTCCACTTGCCCGCTTCCACCCGGAAAGCCCCCCAGGCTGAGTGCGGCATGATCTCCATCACCGAATGGCAGAAGATTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CAA 90 bp | GTCTCCTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGGGATGTTGCAGACATaGCCCAGGAAGCCGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: VSLGSASLLPGSLLSRLGGMLQT*PRKPKA Trigger: CGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCCC...CCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAGGAGAC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS GCA 90 bp | AGGGCTGCAGGCATCATCTGCTTACCGCACCCAGGAAGGGGATGTTaGAGACATTGCCCAGGAAGCCGAAGGCGACAGGGAAAAAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: RAAGIICLPHPGRGC*RHCPGSRRRQGKSP Trigger: AGGGCTTTTTCCCTGTCGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGGGTGCGGTAAGCAGATGATGCCTGCAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475517.1 |
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| CDS-3UTR CAA 90 bp | CTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTCCCAGGAAGGGGATGTaGCAGACATTGCCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LGVCISASWQPLESTWGFPRKGM*QTLPRK Trigger: CTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGGG...AAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CAA 90 bp | GCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCATCGAGCTAGTGCCTaGAAGTCTCCGGAACAGCGC | + |
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Preference number: 5 (lower is better) Translates to: ASWQPLESTWGFDVSCSAHRASA*KSPEQR Trigger: GCGCTGTTCCGGAGACTTCAAGGCACTAGCTCGATG...AGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CAA 90 bp | AGTCTCCTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGAGGAAGCTGGTTCCCTaGAGTTTGTGCCGTTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SLLGVCISASWQPLESTWRKLVP*SLCRWK Trigger: CTTCCAACGGCACAAACTCAAGGGAACCAGCTTCCT...CCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAGGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CAA 90 bp | AGCTCCATTCCTTCCTTCTGGACTTGGGGAGGTCCGGATATGTCGGGGAGTGAGCTGGTTCCCTTGAGTTaGTGCCGTTGGAAGAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: SSIPSFWTWGGPDMSGSELVPLS*CRWKKN Trigger: GTTCTTCTTCCAACGGCACAAACTCAAGGGAACCAG...CTCACTCCCCGACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGAATGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CAA 90 bp | TCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGGGATTTGACGTCACTTCCTGGCAGCCTCTaGAGTCGACTTGGGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: SASLLPGSLLSRLGDLTSLPGSL*SRLGDL Trigger: CAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAG...TGACGTCAAATCCCCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CAA 90 bp | AGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCATTCCTTCTCCTTCCTTCTGGACTaGGGGAGGTCCGGATATGTC | + |
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Preference number: 5 (lower is better) Translates to: SLLSRLGDLTSVAQLHSFSFLLD*GRSGYV Trigger: GACATATCCGGACCTCCCCAAGTCCAGAAGGAAGGA...GAAGGAATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CAA 90 bp | AGTCTCCTTGGGGTCTGCATCTCTGCTTCCTGGCAGCCTCTTGAGTCGACTTGGCTTGAGTTTGTGCCGTaGGAAGAAGAACCAAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: SLLGVCISASWQPLESTWLEFVP*EEEPKG Trigger: ACCTTTTGGTTCTTCTTCCAACGGCACAAACTCAAG...CCAAGTCGACTCAAGAGGCTGCCAGGAAGCAGAGATGCAGACCCCAAGGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS-3UTR CAA 90 bp | AGCCTCTTGAGTCGACTTGGGGATTTGACGTCAGTTGCTCAGCTCCATTCCTTCAGTCGACTTGGGGATTaGACGTCAGTTGCTCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SLLSRLGDLTSVAQLHSFSRLGD*TSVAQL Trigger: GAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACT...GAAGGAATGGAGCTGAGCAACTGACGTCAAATCCCCAAGTCGACTCAAGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS GCA 72 bp | TGCTCCCCCTCACTCCCCAGGGTACGCCCGCAGGGCTaGAGGCATCATCTGCTTACCGCACCCAGGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: CSPSLPRVRPQG*RHHLLTAPRKG Trigger: CCCCTTCCTGGGTGCGGTAAGCAGATGATGCCTGCAGCCCTGCGGGCGTACCCTGGGGAGTGAGGGGGAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475517.1 |
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| CDS CCA 72 bp | TGCCATTCGGTGATGGAGATCATGCCGCACTCAGCCTaGGGGGCTTTCCGGGTGGAAGCGGGCAAGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CHSVMEIMPHSA*GAFRVEAGKWS Trigger: GCTCCACTTGCCCGCTTCCACCCGGAAAGCCCCCCAGGCTGAGTGCGGCATGATCTCCATCACCGAATGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS GCA 72 bp | TCCCCAGGGTACGCCCGCAGGGCTGCAGGCATCATCTaGTTACCGCACCCAGGAAGGGGATGTTGCAGACAT | + |
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Preference number: 6 (lower is better) Translates to: SPGYARRAAGII*LPHPGRGCCRH Trigger: ATGTCTGCAACATCCCCTTCCTGGGTGCGGTAAGCAGATGATGCCTGCAGCCCTGCGGGCGTACCCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475517.1 |
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| CDS GCA 72 bp | GAAGTCTCCGGAACAGCGCACCCAGGAAGGGGATGTTaGAGACATTGCCCAGGAAGCCGAAGGCGACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: EVSGTAHPGRGC*RHCPGSRRRQG Trigger: TCCCTGTCGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGGGTGCGCTGTTCCGGAGACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS CAA 72 bp | CGGAACAGCGCACCCAGGAAGGGGATGTTGCAGACATaGCCCAGGAAGCCGAAGGCGACAGGGAAAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RNSAPRKGMLQT*PRKPKATGKKP Trigger: GGGCTTTTTCCCTGTCGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGGGTGCGCTGTTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS CAA 90 bp | CAGGGCTGCAGGCATCATCTGCTTACCGCACCCAGGAAGGGGATGTaGCAGACATTGCCCAGGAAGCCGAAGGCGACAGGGAAAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: QGCRHHLLTAPRKGM*QTLPRKPKATGKKP Trigger: GGGCTTTTTCCCTGTCGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGGGTGCGGTAAGCAGATGATGCCTGCAGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475517.1 |
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| CDS GCA 72 bp | GGCATCATCTGCTTACCGCACCCAGGAAGGGGATGTTaGAGACATTGCCCAGGAAGCCGAAGGCGACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GIICLPHPGRGC*RHCPGSRRRQG Trigger: TCCCTGTCGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGGGTGCGGTAAGCAGATGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475517.1 |
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| CDS CAA 72 bp | CTGCTTACCGCACCCAGGAAGGGGATGTTGCAGACATaGCCCAGGAAGCCGAAGGCGACAGGGAAAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LLTAPRKGMLQT*PRKPKATGKKP Trigger: GGGCTTTTTCCCTGTCGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGGGTGCGGTAAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475517.1 |
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| CDS CAA 72 bp | AGGCATCATCTGCTTACCGCACCCAGGAAGGGGATGTaGCAGACATTGCCCAGGAAGCCGAAGGCGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: RHHLLTAPRKGM*QTLPRKPKATG Trigger: CCCTGTCGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGGGTGCGGTAAGCAGATGATGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475517.1 |
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| CDS CAA 90 bp | AGGCATCATCTGCTTACCGCACCCAGGAAGGGGATGTTGCAGACATaGCCCAGGAAGCCGAAGGCGACAGGGAAAAAGCCCTTAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RHHLLTAPRKGMLQT*PRKPKATGKKPLKR Trigger: CCTCTTTAAGGGCTTTTTCCCTGTCGCCTTCGGCTTCCTGGGCAATGTCTGCAACATCCCCTTCCTGGGTGCGGTAAGCAGATGATGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000475517.1 |
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| CDS TCA 72 bp | CTCATCTCTGTTTTTCAGACCATCGAGCTAGTGCCTTaGAGTCTCCGGAACAGCGCACCCAGGAAGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: LISVFQTIELVP*SLRNSAPRKGM Trigger: CATCCCCTTCCTGGGTGCGCTGTTCCGGAGACTTCAAGGCACTAGCTCGATGGTCTGAAAAACAGAGATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS CAA 72 bp | GCTCATCTCTGTTTTTCAGACCATCGAGCTAGTGCCTaGAAGTCTCCGGAACAGCGCACCCAGGAAGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: AHLCFSDHRASA*KSPEQRTQEGD Trigger: ATCCCCTTCCTGGGTGCGCTGTTCCGGAGACTTCAAGGCACTAGCTCGATGGTCTGAAAAACAGAGATGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS CCA 72 bp | CCCAGGAGGAAGCTGGTTCCCTTGAGTTTGTGCCGTTaGAAGAAGAACCAAAAGGTCTTCCTCAGGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: PRRKLVPLSLCR*KKNQKVFLRPM Trigger: CATTGGCCTGAGGAAGACCTTTTGGTTCTTCTTCCAACGGCACAAACTCAAGGGAACCAGCTTCCTCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS CAA 72 bp | CCCCAGGAGGAAGCTGGTTCCCTTGAGTTTGTGCCGTaGGAAGAAGAACCAAAAGGTCTTCCTCAGGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: PQEEAGSLEFVP*EEEPKGLPQAN Trigger: ATTGGCCTGAGGAAGACCTTTTGGTTCTTCTTCCAACGGCACAAACTCAAGGGAACCAGCTTCCTCCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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| CDS TCA 72 bp | GGTGGTTCCCATTCTCCCTCTAGCCCCCTCAACCAATaGTCCAAGTTCAAGGAGCTCATCTCTGTTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GGSHSPSSPLNQ*SKFKELISVFQ Trigger: CTGAAAAACAGAGATGAGCTCCTTGAACTTGGATCATTGGTTGAGGGGGCTAGAGGGAGAATGGGAACCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000308302.4 |
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