Pregenerated sensors for GOLGA8N (Homo sapiens)

Ensembl gene IDs: ENSG00000232653, ENSG00000283589

Ensembl transcript IDs: ENST00000448387.6, ENST00000635923.2, ENST00000643824.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR GCA 90 bp	GGCCACTCTAGGGAAAAATCTTTCAGTATTTCCATGACACATTCTGTTTACAATTGGCATTTCTTTCTCTaGTTTTCGTTCCCACCATTT	+
Preference number: 2 (lower is better) Translates to: GHSREKSFSISMTHSVYNWHFFL*FSFPPF Trigger: AAATGGTGGGAACGAAAAGCAGAGAAAGAAATGCCA...ATTGTAAACAGAATGTGTCATGGAAATACTGAAAGATTTTTCCCTAGAGTGGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000448387.6 ENST00000635923.2 ENST00000643824.1
CDS-3UTR TCA 90 bp	GGCCACTCTAGGGAAAAATCTTTCAGTATTTCCATGACACATTCTGTTTACAATGTGGAAATCTGTTGCTaGATCCCCAGGTGGCTGGCA	+
Preference number: 4 (lower is better) Translates to: GHSREKSFSISMTHSVYNVEICC*IPRWLA Trigger: TGCCAGCCACCTGGGGATTCAGCAACAGATTTCCAC...ATTGTAAACAGAATGTGTCATGGAAATACTGAAAGATTTTTCCCTAGAGTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635923.2 ENST00000643824.1
CDS-3UTR CCA 90 bp	ATCACACCAGCAGTCAATAAGGCCACTCTAGGGAAAAATCTTTCAGTATTTCCAAAGGGTTCAGCCGTCTaGTTTTTGAGTTTGGACAAG	+
Preference number: 4 (lower is better) Translates to: ITPAVNKATLGKNLSVFPKGSAV*FLSLDK Trigger: CTTGTCCAAACTCAAAAACCAGACGGCTGAACCCTT...TGGAAATACTGAAAGATTTTTCCCTAGAGTGGCCTTATTGACTGCTGGTGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000635923.2 ENST00000643824.1
CDS-3UTR GCA 90 bp	GGCCACTCTAGGGAAAAATCTTTCAGTATTTCCATGACACATTCTGTTTACAATTCACGAAGATCACCATaGTTATCTGTAGCCCCAAGC	+
Preference number: 4 (lower is better) Translates to: GHSREKSFSISMTHSVYNSRRSP*LSVAPS Trigger: GCTTGGGGCTACAGATAAGCATGGTGATCTTCGTGA...ATTGTAAACAGAATGTGTCATGGAAATACTGAAAGATTTTTCCCTAGAGTGGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635923.2 ENST00000643824.1
CDS-3UTR CCA 90 bp	GGCCACTCTAGGGAAAAATCTTTCAGTATTTCCATGACACATTCTGTTTACAATAAGGGTTCAGCCGTCTaGTTTTTGAGTTTGGACAAG	+
Preference number: 4 (lower is better) Translates to: GHSREKSFSISMTHSVYNKGSAV*FLSLDK Trigger: CTTGTCCAAACTCAAAAACCAGACGGCTGAACCCTT...ATTGTAAACAGAATGTGTCATGGAAATACTGAAAGATTTTTCCCTAGAGTGGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000635923.2 ENST00000643824.1
CDS-3UTR GCA 90 bp	GGCCACTCTAGGGAAAAATCTTTCAGTATTTCCATGACACATTCTGTTTACAATAATGTGCAAATCTCCTaGGACATTTTACTCATCCTC	+
Preference number: 4 (lower is better) Translates to: GHSREKSFSISMTHSVYNNVQIS*DILLIL Trigger: GAGGATGAGTAAAATGTCGCAGGAGATTTGCACATT...ATTGTAAACAGAATGTGTCATGGAAATACTGAAAGATTTTTCCCTAGAGTGGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000448387.6 ENST00000635923.2 ENST00000643824.1
CDS-3UTR CAA 90 bp	ATCACACCAGCAGTCAATAAGGCCACTCTAGGGAAAAATCTTTCAGTATTTCCACCCTGTGGAAACCTGTaGCTGAATCCCCAGGTGGCT	+
Preference number: 5 (lower is better) Translates to: ITPAVNKATLGKNLSVFPPCGNL*LNPQVA Trigger: AGCCACCTGGGGATTCAGCAACAGGTTTCCACAGGG...TGGAAATACTGAAAGATTTTTCCCTAGAGTGGCCTTATTGACTGCTGGTGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448387.6
CDS-3UTR CAA 90 bp	ATCACACCAGCAGTCAATAAGGCCACTCTAGGGAAAAATCTTTCAGTATTTCCACCCTGTGGAAATCTGTaGCTGAATCCCCAGGTGGCT	+
Preference number: 5 (lower is better) Translates to: ITPAVNKATLGKNLSVFPPCGNL*LNPQVA Trigger: AGCCACCTGGGGATTCAGCAACAGATTTCCACAGGG...TGGAAATACTGAAAGATTTTTCCCTAGAGTGGCCTTATTGACTGCTGGTGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635923.2 ENST00000643824.1
CDS-3UTR CAA 90 bp	GGCCACTCTAGGGAAAAATCTTTCAGTATTTCCATGACACATTCTGTTTACAATCCCTGTGGAAATCTGTaGCTGAATCCCCAGGTGGCT	+
Preference number: 5 (lower is better) Translates to: GHSREKSFSISMTHSVYNPCGNL*LNPQVA Trigger: AGCCACCTGGGGATTCAGCAACAGATTTCCACAGGG...ATTGTAAACAGAATGTGTCATGGAAATACTGAAAGATTTTTCCCTAGAGTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000635923.2 ENST00000643824.1