RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GOLGA7B (Homo sapiens)

Ensembl gene IDs: ENSG00000155265

Ensembl transcript IDs: ENST00000370602.6, ENST00000423054.1, ENST00000596005.2

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGGCATAGGCCGTGGCCAGGGGCTGCGGTGGAGCCCACTGAACTaGGGCTCTCCAGGGGGATCCTTGGACCAGGACTCACTTGGGCCG +
Preference number: 1 (lower is better)
Translates to: EGIGRGQGLRWSPLN*GSPGGSLDQDSLGP
Trigger: CGGCCCAAGTGAGTCCTGGTCCAAGGATCCCCCTGGAGAGCCGCAGTTCAGTGGGCTCCACCGCAGCCCCTGGCCACGGCCTATGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp GCCTGTGCCCAGCCCTCCCATGGGAGATGCACAGGTCAGACACAATaGCCAGCCCCACAGGGGCCCAGGGAGGGCATAGGCCGTGGCCAG +
Preference number: 1 (lower is better)
Translates to: ACAQPSHGRCTGQTQ*PAPQGPREGIGRGQ
Trigger: CTGGCCACGGCCTATGCCCTCCCTGGGCCCCTGTGGGGCTGGGCATTGTGTCTGACCTGTGCATCTCCCATGGGAGGGCTGGGCACAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp CCCAGGCCCACAGTGAGTCGAGTCCCCCACTACCCTTCACCGGGCTaGCTCTGGGTCCCGCATGCCTGCGAGCACAGCCCATGCACCCTC +
Preference number: 1 (lower is better)
Translates to: PRPTVSRVPHYPSPG*LWVPHACEHSPCTL
Trigger: GAGGGTGCATGGGCTGTGCTCGCAGGCATGCGGGACCCAGAGGCAGCCCGGTGAAGGGTAGTGGGGGACTCGACTCACTGTGGGCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp CGTCACCCTCCCTCCCACCCCGGGCAGCAGGGTGAGCCCAAAGAATaGCTCAGAAGCGGGTGCTCTGGTAGCGCAGCCGCCGCAGGTCTG +
Preference number: 1 (lower is better)
Translates to: RHPPSHPGQQGEPKE*LRSGCSGSAAAAGL
Trigger: CAGACCTGCGGCGGCTGCGCTACCAGAGCACCCGCTTCTGAGTCATTCTTTGGGCTCACCCTGCTGCCCGGGGTGGGAGGGAGGGTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp CTCTGGGTCCCGCATGCCTGCGAGCACAGCCCATGCACCCTCCCGTaGTGCCCTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGG +
Preference number: 1 (lower is better)
Translates to: LWVPHACEHSPCTLP*CPGSGGASPASKPR
Trigger: CCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAGGGCATCACGGGAGGGTGCATGGGCTGTGCTCGCAGGCATGCGGGACCCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp CGAGCACAGCCCATGCACCCTCCCGTGATGCCCTGGAAGTGGAGGTaGCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTTCCC +
Preference number: 1 (lower is better)
Translates to: RAQPMHPPVMPWKWR*QPGLKTQAWLQVLP
Trigger: GGGAAGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAGGGCATCACGGGAGGGTGCATGGGCTGTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp TGCTCCTGGGTCTTGATGGGGCCTGTCCCTGGCTGGCAAGGTGGGTaGAGGGACATGGCTACAGCCAGACCCCGGAGAGACAGGCCACCA +
Preference number: 1 (lower is better)
Translates to: CSWVLMGPVPGWQGG*RDMATARPRRDRPP
Trigger: TGGTGGCCTGTCTCTCCGGGGTCTGGCTGTAGCCATGTCCCTGCACCCACCTTGCCAGCCAGGGACAGGCCCCATCAAGACCCAGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp CTGGCGCAGGGAGAGGAGCATGTGCAGCAGGAGCTTCCTGAGGCATaGCTGAGTGGCTGGGGCCTCACTTGGGACCTCGGGGACAGTCTG +
Preference number: 1 (lower is better)
Translates to: LAQGEEHVQQELPEA*LSGWGLTWDLGDSL
Trigger: CAGACTGTCCCCGAGGTCCCAAGTGAGGCCCCAGCCACTCAGGCATGCCTCAGGAAGCTCCTGCTGCACATGCTCCTCTCCCTGCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 90 bp TGCCTGCGAGCACAGCCCATGCACCCTCCCGTGATGCCCTGGAAGTaGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTC +
Preference number: 1 (lower is better)
Translates to: CLRAQPMHPPVMPWK*RCQPGLKTQAWLQV
Trigger: GACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAGGGCATCACGGGAGGGTGCATGGGCTGTGCTCGCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp AATGACTCAGAAGCGGGTGCTCTGGTAGCGCAGCCGCCGCAGGTCTaGAAGGCCCTCACTCCGGCCATACACCTCCCTACAGGGACTCTC +
Preference number: 1 (lower is better)
Translates to: NDSEAGALVAQPPQV*KALTPAIHLPTGTL
Trigger: GAGAGTCCCTGTAGGGAGGTGTATGGCCGGAGTGAGGGCCTTGCAGACCTGCGGCGGCTGCGCTACCAGAGCACCCGCTTCTGAGTCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp TCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGTaGGTCCAGGCTGCACACAGCTCACTGCAGCCCTTAGCGGCAGTG +
Preference number: 1 (lower is better)
Translates to: SLVATHTRPRFQQRE*VQAAHSSLQPLAAV
Trigger: CACTGCCGCTAAGGGCTGCAGTGAGCTGTGTGCAGCCTGGACTCACTCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp TTTCATCTTCGGGACACCAGCCCCAGGGGCTGCTCCCATCCCACCTaGTCCTCTGGGCCTCAGAAGCCGGGCATCATTGGCTGGACATCT +
Preference number: 1 (lower is better)
Translates to: FHLRDTSPRGCSHPT*SSGPQKPGIIGWTS
Trigger: AGATGTCCAGCCAATGATGCCCGGCTTCTGAGGCCCAGAGGAGCAGGTGGGATGGGAGCAGCCCCTGGGGCTGGTGTCCCGAAGATGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp AGCCCAGGGGCTGGCCCTAGGGAGAAAGTCACCAGACTCCACCTTTaGCCCACACCTCTGGAAGCCACAGAAAAGTCCCTGCGGGTGGCA +
Preference number: 1 (lower is better)
Translates to: SPGAGPREKVTRLHL*PTPLEATEKSLRVA
Trigger: TGCCACCCGCAGGGACTTTTCTGTGGCTTCCAGAGGTGTGGGGCAAAGGTGGAGTCTGGTGACTTTCTCCCTAGGGCCAGCCCCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp TGTGATCCCAGCCTCCCTGCAGCCTCAGGCAGCTTCCCATCTGGGTaGCATCCCTGTGGTAACAGAGTGGGCACTGAGTCAGGAGACCTG +
Preference number: 1 (lower is better)
Translates to: CDPSLPAASGSFPSG*HPCGNRVGTESGDL
Trigger: CAGGTCTCCTGACTCAGTGCCCACTCTGTTACCACAGGGATGGCACCCAGATGGGAAGCTGCCTGAGGCTGCAGGGAGGCTGGGATCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 90 bp TGGGAGACAGCCACGGGACGCAGGGCCCAAGGGAAAGAGTCCTGGTaGATATGGGTTTGGGATGAGGGGTCATGCAGTGTGGGAGTCCTC +
Preference number: 1 (lower is better)
Translates to: WETATGRRAQGKESW*IWVWDEGSCSVGVL
Trigger: GAGGACTCCCACACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGGCCCTGCGTCCCGTGGCTGTCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 90 bp CCTCGAGCTTCTGTAAACCCTGTGGTTTCACACACACCCGCCCTGTaGCCAAAGGAAGGAAGCCAGACAGCAGGGTGCTGGCGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: PRASVNPVVSHTPAL*PKEGSQTAGCWRRE
Trigger: CTCCCTGCGCCAGCACCCTGCTGTCTGGCTTCCTTCCTTTGGCCACAGGGCGGGTGTGTGTGAAACCACAGGGTTTACAGAAGCTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 90 bp ACGGGACGCAGGGCCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTaGGATGAGGGGTCATGCAGTGTGGGAGTCCTCTATGTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: TGRRAQGKESWWIWV*DEGSCSVGVLYVAG
Trigger: GCCTGCCACATAGAGGACTCCCACACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGGCCCTGCGTCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 90 bp TACTGGGAGACAGCCACGGGACGCAGGGCCCAAGGGAAAGAGTCCTaGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTGGGAGTC +
Preference number: 1 (lower is better)
Translates to: YWETATGRRAQGKES*WIWVWDEGSCSVGV
Trigger: GACTCCCACACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGGCCCTGCGTCCCGTGGCTGTCTCCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp TGGGCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTaGAAGGAGGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTT +
Preference number: 1 (lower is better)
Translates to: WASEAGHHWLDISFP*KEGVCLSPAGCWHL
Trigger: AAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp AACCCACACACGGCCCAGGTTCCAGCAGAGGGAGTGAGTCCAGGCTaGACACAGCTCACTGCAGCCCTTAGCGGCAGTGACAACAAACAT +
Preference number: 1 (lower is better)
Translates to: NPHTAQVPAEGVSPG*TQLTAALSGSDNKH
Trigger: ATGTTTGTTGTCACTGCCGCTAAGGGCTGCAGTGAGCTGTGTGCAGCCTGGACTCACTCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 90 bp ACAGCCACGGGACGCAGGGCCCAAGGGAAAGAGTCCTGGTGGATATaGGTTTGGGATGAGGGGTCATGCAGTGTGGGAGTCCTCTATGTG +
Preference number: 1 (lower is better)
Translates to: TATGRRAQGKESWWI*VWDEGSCSVGVLYV
Trigger: CACATAGAGGACTCCCACACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGGCCCTGCGTCCCGTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp CCAGTGGCTGGTCTTGCACATCCACTTCTAACACCTCCCGCCAACTaGGATAGGCAGCCCCCTTCATTTCATCTTCGGGACACCAGCCCC +
Preference number: 1 (lower is better)
Translates to: PVAGLAHPLLTPPAN*DRQPPSFHLRDTSP
Trigger: GGGGCTGGTGTCCCGAAGATGAAATGAAGGGGGCTGCCTATCTCAGTTGGCGGGAGGTGTTAGAAGTGGATGTGCAAGACCAGCCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp CACAGGGAAGAAGTCACAGACCCTCAGGTAGCGAAGACAGCAGGATaGAGAGAAGCAGTCGTTGGCCTGGCAGCCAAGGGGAACACACAA +
Preference number: 1 (lower is better)
Translates to: HREEVTDPQVAKTAG*REAVVGLAAKGNTQ
Trigger: TTGTGTGTTCCCCTTGGCTGCCAGGCCAACGACTGCTTCTCTGCATCCTGCTGTCTTCGCTACCTGAGGGTCTGTGACTTCTTCCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp GACAGAGTTCATCCTGCTCCCCATGTCAGGTCCAGTTCAGGCAGCTaGGTATCCCCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCA +
Preference number: 1 (lower is better)
Translates to: DRVHPAPHVRSSSGS*VSPHVVLEHRTDPP
Trigger: TGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGGGGATACTCAGCTGCCTGAACTGGACCTGACATGGGGAGCAGGATGAACTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp CCTAATCCCAGGACGGCTGAGGCCCTCAAGCTGTTAAGCGGCCTCTaGGGCTGGATCTGTCTTCTTCCTTGCAGTTTGGAGTCAGATTGC +
Preference number: 1 (lower is better)
Translates to: PNPRTAEALKLLSGL*GWICLLPCSLESDC
Trigger: GCAATCTGACTCCAAACTGCAAGGAAGAAGACAGATCCAGCCTCAGAGGCCGCTTAACAGCTTGAGGGCCTCAGCCGTCCTGGGATTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 90 bp ATGTCAGGTCCAGTTCAGGCAGCTGAGTATCCCCTCATGTGGTCCTaGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAAGCA +
Preference number: 1 (lower is better)
Translates to: MSGPVQAAEYPLMWS*SIELTLHRHGAEKA
Trigger: TGCTTTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGGGGATACTCAGCTGCCTGAACTGGACCTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp TCCTACATGCTGCTCCCATGTCTGGTAGAAAAGCAGGCCTCTCTTTaGCTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACATCCACT +
Preference number: 1 (lower is better)
Translates to: SYMLLPCLVEKQASL*LQRATSSGWSCTST
Trigger: AGTGGATGTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTTTCTACCAGACATGGGAGCAGCATGTAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp TTCAGATCTGATGTGGAGTGGTGTTTGCCTTGCCTTATCCCTGGGTaGATGGTAAAGCCCAAACCAGGTGGTGATGCCTCCTGTCTGGGC +
Preference number: 1 (lower is better)
Translates to: FRSDVEWCLPCLIPG*MVKPKPGGDASCLG
Trigger: GCCCAGACAGGAGGCATCACCACCTGGTTTGGGCTTTACCATTCACCCAGGGATAAGGCAAGGCAAACACCACTCCACATCAGATCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp AGTCGCCCGAGAAGGCTCATGCGGAAACCTCCGAAGGCTGGGCTCTaGAAGGAAGGAAAGAAACCGACATTACCAAGCATCTCTTTCATG +
Preference number: 1 (lower is better)
Translates to: SRPRRLMRKPPKAGL*KEGKKPTLPSISFM
Trigger: CATGAAAGAGATGCTTGGTAATGTCGGTTTCTTTCCTTCCTTTCAGAGCCCAGCCTTCGGAGGTTTCCGCATGAGCCTTCTCGGGCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp CAGCTCCAGGATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTaGAATGACAGGCCCTTTGAACATCCTCTTGGAGGAAGAGTTGTG +
Preference number: 1 (lower is better)
Translates to: QLQDPACEVLLSSRC*NDRPFEHPLGGRVV
Trigger: CACAACTCTTCCTCCAAGAGGATGTTCAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGATCCTGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp TGGCCTGGCAGCCAAGGGGAACACACAAACACACTCACACACACATaGACTCACCTGCATACACACACACTCATACACATGAACACTCAT +
Preference number: 1 (lower is better)
Translates to: WPGSQGEHTNTLTHT*THLHTHTLIHMNTH
Trigger: ATGAGTGTTCATGTGTATGAGTGTGTGTGTATGCAGGTGAGTGCATGTGTGTGTGAGTGTGTTTGTGTGTTCCCCTTGGCTGCCAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp AGATTCCAGATTAGAGATGCTGAGGTGTCTGCCTCTTCAGTAGACTaGAAGCTCCAAGAAGACAGAGTTCATCCTGCTCCCCATGTCAGG +
Preference number: 1 (lower is better)
Translates to: RFQIRDAEVSASSVD*KLQEDRVHPAPHVR
Trigger: CCTGACATGGGGAGCAGGATGAACTCTGTCTTCTTGGAGCTTGCAGTCTACTGAAGAGGCAGACACCTCAGCATCTCTAATCTGGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 90 bp AAATCTGGCCTCGGGGTAGAACAAACTTCCTATCCCAAAACAGAATaGACCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCC +
Preference number: 1 (lower is better)
Translates to: KSGLGVEQTSYPKTE*TCPHIREHAHLWQP
Trigger: GGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGGTTCATTCTGTTTTGGGATAGGAAGTTTGTTCTACCCCGAGGCCAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp AAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGATTTTTCATaGTTCCAGTTGACATCCATTGCCACCAAGGTTGAACGCCTCGGG +
Preference number: 1 (lower is better)
Translates to: KSESLRIGSGIGDFS*FQLTSIATKVERLG
Trigger: CCCGAGGCGTTCAACCTTGGTGGCAATGGATGTCAACTGGAAGCATGAAAAATCACCAATGCCTGATCCTATCCTCAGAGATTCTGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp CACACTGCACTTACACACATGTGCACTCACACATACATTCACATGTaGATACACACAGGTTCTAATCTCAGGAAACTGGCTGTAGTTCAG +
Preference number: 1 (lower is better)
Translates to: HTALTHMCTHTYIHM*IHTGSNLRKLAVVQ
Trigger: CTGAACTACAGCCAGTTTCCTGAGATTAGAACCTGTGTGTATGCACATGTGAATGTATGTGTGAGTGCACATGTGTGTAAGTGCAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 90 bp GGGAATCACATGGTGCATATGCATTTTTGTGTCTGGCTGCTTCTGTaGAACCATAAACTTCTTATTCAGGTCTCAGGCATTTTCAGAGGT +
Preference number: 1 (lower is better)
Translates to: GNHMVHMHFCVWLLL*NHKLLIQVSGIFRG
Trigger: ACCTCTGAAAATGCCTGAGACCTGAATAAGAAGTTTATGGTTCCACAGAAGCAGCCAGACACAAAAATGCATATGCACCATGTGATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp CATATAAGGGGAATCACATGGTGCATATGCATTTTTGTGTCTGGCTaGTTCTGTGGAACCATAAACTTCTTATTCAGGTCTCAGGCATTT +
Preference number: 1 (lower is better)
Translates to: HIRGITWCICIFVSG*FCGTINFLFRSQAF
Trigger: AAATGCCTGAGACCTGAATAAGAAGTTTATGGTTCCACAGAAGCAGCCAGACACAAAAATGCATATGCACCATGTGATTCCCCTTATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 90 bp AGCTCAAGAAATGAGGATTTATTGATATCATTAATTGATTACTTTTaGCCTCGCTTTCAGTCCAACCTGTTCCCCCACCCAAGGCTACAA +
Preference number: 1 (lower is better)
Translates to: SSRNEDLLISLIDYF*PRFQSNLFPHPRLQ
Trigger: TTGTAGCCTTGGGTGGGGGAACAGGTTGGACTGAAAGCGAGGCCAAAAGTAATCAATTAATGATATCAATAAATCCTCATTTCTTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 90 bp TATTCGGGAATCAGTGAACCCTTGGATAAATATCTGTTTATTCTATaGCAGAATCTGAAGCCTGCTATAAATCTACATCATGAGGCCATC +
Preference number: 1 (lower is better)
Translates to: YSGISEPLDKYLFIL*QNLKPAINLHHEAI
Trigger: GATGGCCTCATGATGTAGATTTATAGCAGGCTTCAGATTCTGGCATAGAATAAACAGATATTTATCCAAGGGTTCACTGATTCCCGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACCAGCCGCCGCAGGTCTaGAAGGCCCTCACTCCGGCC +
Preference number: 2 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHQPPQV*KALTPA
Trigger: GGCCGGAGTGAGGGCCTTGCAGACCTGCGGCGGCTG...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACTCCCCAGGCCCACAGTaGGTCGAGTCCCCCACTACC +
Preference number: 2 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHSPGPQ*VESPTT
Trigger: GGTAGTGGGGGACTCGACTCACTGTGGGCCTGGGGA...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACGGCTGGCAAGGTGGGTaGAGGGACATGGCTACAGCC +
Preference number: 2 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHGWQGG*RDMATA
Trigger: GGCTGTAGCCATGTCCCTGCACCCACCTTGCCAGCC...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACCTCTGGGAACAGGCCTaGGTTTGTGATCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHLWEQA*VCDPSL
Trigger: GAGGCTGGGATCACAAACTCAGGCCTGTTCCCAGAG...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACGCGAAGACAGCAGGATaGAGAGAAGCAGTCGTTGGC +
Preference number: 2 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHAKTAG*REAVVG
Trigger: GCCAACGACTGCTTCTCTGCATCCTGCTGTCTTCGC...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGACAGGCCGGGGCCCTaGAGGGGCATGAGAAGGAAC +
Preference number: 2 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPDRPGP*RGMRRN
Trigger: GTTCCTTCTCATGCCCCTGCAGGGCCCCGGCCTGTC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTAGGTCAGGAGTGCGCTaGACAGCTCCCAACCACGGC +
Preference number: 2 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPRSGVR*TAPNHG
Trigger: GCCGTGGTTGGGAGCTGTTCAGCGCACTCCTGACCT...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACTGGTGGATATGGGTTTaGGATGAGGGGTCATGCAGT +
Preference number: 2 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHWWIWV*DEGSCS
Trigger: ACTGCATGACCCCTCATCCCAAACCCATATCCACCA...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACGCAAAGTCTCAAAGTTaGATGCTTCTCGCAAGGCCG +
Preference number: 2 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHAKSQS*MLLARP
Trigger: CGGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGC...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGGCCCACAGGAAATATaGGGCCCGTCACCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGGPQEI*GPSPSL
Trigger: GAGGGAGGGTGACGGGCCTCATATTTCCTGTGGGCC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTACAGGCCTGAGTTTGTaGTCCCAGCCTCCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPTGLSL*SQPPCS
Trigger: GCTGCAGGGAGGCTGGGATCACAAACTCAGGCCTGT...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 90 bp GGAAATGGACTGATCCAGACGGGGGTGAGGGACAGGGGGCATAGGTaGATGGCCCACAGGAAATATGAGGCCCGTCACCCTCCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: GNGLIQTGVRDRGHR*MAHRKYEARHPPSH
Trigger: GTGGGAGGGAGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCTCACCCCCGTCTGGATCAGTCCATTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGCGGGTGGCAGTGGCTaGCAACCGGGGAGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLAGGSG*QPGSRG
Trigger: CCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTCAGAGAAGCAGTCGTTaGCCTGGCAGCCAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPQRSSR*PGSQGE
Trigger: TTCCCCTTGGCTGCCAGGCCAACGACTGCTTCTCTG...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 90 bp CTGGGCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTaGCAAGGAGGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCT +
Preference number: 2 (lower is better)
Translates to: LGLRSRASLAGHLLS*QGGSLPFPCRLLAP
Trigger: AGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAAGGTCAGGAGTGCGCTaGACAGCTCCCAACCACGGC +
Preference number: 2 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRERSGVR*TAPNHG
Trigger: GCCGTGGTTGGGAGCTGTTCAGCGCACTCCTGACCT...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACACCCCGGGCAGCAGGGTaGGCCCAAAGAATGACTCAG +
Preference number: 2 (lower is better)
Translates to: KLDASRKAELASSSECRTPRAAG*AQRMTQ
Trigger: CTGAGTCATTCTTTGGGCTCACCCTGCTGCCCGGGG...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAGGCCCACAGGAAATATaGGGCCCGTCACCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: KLDASRKAELASSSECRTGPQEI*GPSPSL
Trigger: GAGGGAGGGTGACGGGCCTCATATTTCCTGTGGGCC...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGAGCCCCAGGCTCTGTaGCCCCCAACCAGCACCTGG +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLEPQAL*PPTSTW
Trigger: CCAGGTGCTGGTTGGGGGGCACAGAGCCTGGGGCTC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGAGTCCTGGTGGATATaGGTTTGGGATGAGGGGTCA +
Preference number: 2 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPESWWI*VWDEGS
Trigger: TGACCCCTCATCCCAAACCCATATCCACCAGGACTC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTATCCCACCTGCTCCTCTaGGCCTCAGAAGCCGGGCAT +
Preference number: 2 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLSHLLL*ASEAGH
Trigger: ATGCCCGGCTTCTGAGGCCCAGAGGAGCAGGTGGGA...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGCTACCTCCAGTGGCTaGTCTTGCACATCCACTTCT +
Preference number: 2 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPATSSG*SCTSTS
Trigger: AGAAGTGGATGTGCAAGACCAGCCACTGGAGGTAGC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTGGTGAGCCCAAAGAATaGCTCAGAAGCGGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPGEPKE*LRSGCS
Trigger: AGAGCACCCGCTTCTGAGTCATTCTTTGGGCTCACC...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAGGCCCTGCAGGGGCATaGGAAGGAACAGATACTGGG +
Preference number: 2 (lower is better)
Translates to: KLDASRKAELASSSECRTGPAGA*EGTDTG
Trigger: CCCAGTATCTGTTCCTTCTCATGCCCCTGCAGGGCC...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACGAGCCCCAGGCTCTGTaGCCCCCAACCAGCACCTGG +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHEPQAL*PPTSTW
Trigger: CCAGGTGCTGGTTGGGGGGCACAGAGCCTGGGGCTC...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAACACTTGTGCACTGGTaGACACACATGCGCTCACAC +
Preference number: 2 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGTLVHW*THMRSH
Trigger: GTGTGAGCGCATGTGTGTGCACCAGTGCACAAGTGT...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAAGCTTCCCATCTGGGTaGCATCCCTGTGGTAACAGA +
Preference number: 2 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGSFPSG*HPCGNR
Trigger: TCTGTTACCACAGGGATGGCACCCAGATGGGAAGCT...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAAGATCTGTCTCTGTGTaGCCCAGACCAGCCCCATCG +
Preference number: 2 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRERSVSV*PRPAPS
Trigger: CGATGGGGCTGGTCTGGGCCACACAGAGACAGATCT...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGACTCGCAAGGCCGAGCTaGCCTCTAGCTCTGAATGCA +
Preference number: 2 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGLARPS*PLALNA
Trigger: TGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAG...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGCTGAGTCAGGAGACCTaGGTTCCAAGCTTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: PALILENTLTCGNPHTAQLSQET*VPSLGP
Trigger: AGGGCCCAAGCTTGGAACCCAGGTCTCCTGACTCAG...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 90 bp GTGGTAACAGAGTGGGCACTGAGTCAGGAGACCTGGGTTCCAAGCTaGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAGGGCAAGTC +
Preference number: 2 (lower is better)
Translates to: VVTEWALSQETWVPS*GPVIINQLCGLGQV
Trigger: GACTTGCCCTAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTCCTGACTCAGTGCCCACTCTGTTACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAGGTGAGCCCAAAGAATaGCTCAGAAGCGGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREGEPKE*LRSGCS
Trigger: AGAGCACCCGCTTCTGAGTCATTCTTTGGGCTCACC...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAGATATGGGTTTGGGATaGGGGGTCATGCAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREDMGLG*GVMQCG
Trigger: CCCACACTGCATGACCCCTCATCCCAAACCCATATC...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGTCCAGTTCAGGCAGCTaGGTATCCCCTCATGTGGTC +
Preference number: 2 (lower is better)
Translates to: PALILENTLTCGNPHTAQSSSGS*VSPHVV
Trigger: GACCACATGAGGGGATACTCAGCTGCCTGAACTGGA...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGTGGAGCCCACTGAACTaGGGCTCTCCAGGGGGATCC +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLWSPLN*GSPGGS
Trigger: GGATCCCCCTGGAGAGCCGCAGTTCAGTGGGCTCCA...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACTGGGTCCCGCATGCCTaGGAGCACAGCCCATGCACC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHWVPHA*EHSPCT
Trigger: GGTGCATGGGCTGTGCTCGCAGGCATGCGGGACCCA...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAAGGGGTCATGCAGTGTaGGAGTCCTCTATGTGGCAG +
Preference number: 2 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRERGHAV*ESSMWQ
Trigger: CTGCCACATAGAGGACTCCCACACTGCATGACCCCT...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGAGAAGGAACAGATACTaGGAGACAGCCACGGGACGC +
Preference number: 2 (lower is better)
Translates to: PALILENTLTCGNPHTAQRRNRY*ETATGR
Trigger: GCGTCCCGTGGCTGTCTCCCAGTATCTGTTCCTTCT...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGTGGGTGCAGGGACATaGCTACAGCCAGACCCCGGA +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLVGAGT*LQPDPG
Trigger: TCCGGGGTCTGGCTGTAGCCATGTCCCTGCACCCAC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACGGCTGGGGCCTCACTTaGGACCTCGGGGACAGTCTG +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHGWGLT*DLGDSL
Trigger: CAGACTGTCCCCGAGGTCCCAAGTGAGGCCCCAGCC...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGCATGCCTGAGTGGCTaGGGCCTCACTTGGGACCTC +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLACLSG*GLTWDL
Trigger: GAGGTCCCAAGTGAGGCCCCAGCCACTCAGGCATGC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCAGACAGCAGGGTGCTaGCGCAGGGAGAGGAGCATG +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLQTAGC*RRERSM
Trigger: CATGCTCCTCTCCCTGCGCCAGCACCCTGCTGTCTG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 90 bp CTGGCACAGCCCTCTGACTCTCTTCACAGTTTCCCACTTCCTCCATaGTCCCTGATTCAAAACCCGACGCAGCTCCAGGATCCTGCATGC +
Preference number: 2 (lower is better)
Translates to: LAQPSDSLHSFPLPP*SLIQNPTQLQDPAC
Trigger: GCATGCAGGATCCTGGAGCTGCGTCGGGTTTTGAATCAGGGACAATGGAGGAAGTGGGAAACTGTGAAGAGAGTCAGAGGGCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGACACCTCCCGCCAACTaGGATAGGCAGCCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLTPPAN*DRQPPS
Trigger: TGAAGGGGGCTGCCTATCTCAGTTGGCGGGAGGTGT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACTGGGATGAGGGGTCATaGAGTGTGGGAGTCCTCTAT +
Preference number: 2 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNWDEGS*SVGVLY
Trigger: ATAGAGGACTCCCACACTGCATGACCCCTCATCCCA...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGGAGTGAGTCCAGGCTaGACACAGCTCACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLGVSPG*TQLTAA
Trigger: GGCTGCAGTGAGCTGTGTGCAGCCTGGACTCACTCC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACGAGCTTCCTGAGGCATaGCTGAGTGGCTGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHELPEA*LSGWGL
Trigger: GAGGCCCCAGCCACTCAGGCATGCCTCAGGAAGCTC...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAGAGTCCTGGTGGATATaGGTTTGGGATGAGGGGTCA +
Preference number: 2 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGESWWI*VWDEGS
Trigger: TGACCCCTCATCCCAAACCCATATCCACCAGGACTC...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACAGAAGGAACAGATACTaGGAGACAGCCACGGGACGC +
Preference number: 2 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHRRNRY*ETATGR
Trigger: GCGTCCCGTGGCTGTCTCCCAGTATCTGTTCCTTCT...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCTCCAGGGGGATCCTTaGACCAGGACTCACTTGGGC +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLLQGDP*TRTHLG
Trigger: GCCCAAGTGAGTCCTGGTCCAAGGATCCCCCTGGAG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCCCCACCTAAGAGGCTaGAGCCGTTGTCCCCACAGT +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLPHLRG*SRCPHS
Trigger: ACTGTGGGGACAACGGCTCCAGCCTCTTAGGTGGGG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACACCTCGGGGACAGTCTaGCTGAGGCTGGAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHTSGTV*LRLELL
Trigger: GAGCAGCTCCAGCCTCAGCCAGACTGTCCCCGAGGT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCACACACCCGCCCTGTaGCCAAAGGAAGGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLHTPAL*PKEGSQ
Trigger: CTGGCTTCCTTCCTTTGGCCACAGGGCGGGTGTGTG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 90 bp TTGCAAGGAGGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTaGAAGGTCCATGGAAACCTCACCTACAAAGCCTTAAAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: LQGGSLPFPCRLLAP*KVHGNLTYKALKSP
Trigger: GGGGCTCTTTAAGGCTTTGTAGGTGAGGTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCCTCCTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACACACCTCCCGCCAACTaGGATAGGCAGCCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHTPPAN*DRQPPS
Trigger: TGAAGGGGGCTGCCTATCTCAGTTGGCGGGAGGTGT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACTTCCTGAGGCATGCCTaGGTGGCTGGGGCCTCACTT +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHFLRHA*VAGASL
Trigger: AAGTGAGGCCCCAGCCACTCAGGCATGCCTCAGGAA...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACGGAGTGAGTCCAGGCTaGACACAGCTCACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHGVSPG*TQLTAA
Trigger: GGCTGCAGTGAGCTGTGTGCAGCCTGGACTCACTCC...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACCCACAGAAAAGTCCCTaGGGGTGGCAGTGGCTGCCA +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHPQKSP*GWQWLP
Trigger: TGGCAGCCACTGCCACCCGCAGGGACTTTTCTGTGG...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGACCAGACTCCACCTTTaGCCCACACCTCTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLTRLHL*PTPLEA
Trigger: GGCTTCCAGAGGTGTGGGGCAAAGGTGGAGTCTGGT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACCCCGTTGTCTTGTCATaGGGAGCTGAGAGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHPVVLS*GAERGH
Trigger: GTGCCCCCTCTCAGCTCCCCATGACAAGACAACGGG...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACGAAGCCGGGCATCATTaGCTGGACATCTCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHEAGHH*LDISFP
Trigger: AGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTC...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACTGCCCAGCCCTCCCATaGGAGATGCACAGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHCPALP*EMHRSD
Trigger: GTCTGACCTGTGCATCTCCCATGGGAGGGCTGGGCA...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCTGAGTCAGGAGACCTaGGTTCCAAGCTTGGGCCCT +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLLSQET*VPSLGP
Trigger: AGGGCCCAAGCTTGGAACCCAGGTCTCCTGACTCAG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 90 bp ATCCTACATGCTGCTCCCATGTCTGGTAGAAAAGCAGGCCTCTCTTaGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACATCCAC +
Preference number: 2 (lower is better)
Translates to: ILHAAPMSGRKAGLS*TPESYLQWLVLHIH
Trigger: GTGGATGTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTTTCTACCAGACATGGGAGCAGCATGTAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 90 bp AATGACAGGCCCTTTGAACATCCTCTTGGAGGAAGAGTTGTGAGCTaGGTGCAGGCTGCCCTTGGCACTGCCAGGGGAATAAATCCTCCT +
Preference number: 2 (lower is better)
Translates to: NDRPFEHPLGGRVVS*VQAALGTARGINPP
Trigger: AGGAGGATTTATTCCCCTGGCAGTGCCAAGGGCAGCCTGCACCAAGCTCACAACTCTTCCTCCAAGAGGATGTTCAAAGGGCCTGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACCTGCAAGGACTAGGCTaGCTCTCTCTGGTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHLQGLG*LSLVSG
Trigger: CCCAGAGACCAGAGAGAGTCAGCCTAGTCCTTGCAG...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGTCCAGTTCAGGCAGCTaGGTATCCCCTCATGTGGTC +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLSSSGS*VSPHVV
Trigger: GACCACATGAGGGGATACTCAGCTGCCTGAACTGGA...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAGCAAAGTCTCAAAGTTaGATGCTTCTCGCAAGGCCG +
Preference number: 2 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLAKSQS*MLLARP
Trigger: CGGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGC...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGAGAGCTACCTCCAGTaGCTGGTCTTGCACATCCAC +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLESYLQ*LVLHIH
Trigger: GTGGATGTGCAAGACCAGCCACTGGAGGTAGCTCTC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCATCAACCAGCTGTGTaGCCTAGGGCAAGTCACCCA +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLHQPAV*PRASHP
Trigger: TGGGTGACTTGCCCTAGGCCACACAGCTGGTTGATG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGGGCCTGTCCCTGGCTaGCAAGGTGGGTGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGGPVPG*QGGCRD
Trigger: GTCCCTGCACCCACCTTGCCAGCCAGGGACAGGCCC...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTATCTCATCTTCAGTACTaGGTGACCTGTGTGATCCAG +
Preference number: 2 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLSHLQY*VTCVIQ
Trigger: CTGGATCACACAGGTCACTCAGTACTGAAGATGAGA...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCAGCCGCCGCAGGTCTaGAAGGCCCTCACTCCGGCC +
Preference number: 2 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYQPPQV*KALTPA
Trigger: GGCCGGAGTGAGGGCCTTGCAGACCTGCGGCGGCTG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACACAAGGGAAAGAGTCCTaGTGGATATGGGTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: KLDASRKAELASSSECRTQGKES*WIWVWD
Trigger: ATCCCAAACCCATATCCACCAGGACTCTTTCCCTTG...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACGATTCAGGCCCCGCATaGCTATGTCTCTTCACGGAG +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHDSGPA*LCLFTE
Trigger: CTCCGTGAAGAGACATAGCCATGCGGGGCCTGAATC...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTCCAACCGGGGAGCCGTaGGGGACGTGTCACAACAGC +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGPTGEP*GTCHNS
Trigger: GCTGTTGTGACACGTCCCCCACGGCTCCCCGGTTGG...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACCTGTTAAGCGGCCTCTaGGGCTGGATCTGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHLLSGL*GWICLL
Trigger: AAGAAGACAGATCCAGCCTCAGAGGCCGCTTAACAG...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGAGTCTCAAAGTTGGATaGTTCTCGCAAGGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLSLKVG*FSQGRA
Trigger: AGCTCGGCCTTGCGAGAAGCATCCAACTTTGAGACT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGAGTATCCCCTCATGTaGTCCTGGAGCATAGAACTG +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLEYPLM*SWSIEL
Trigger: CAGTTCTATGCTCCAGGACCACATGAGGGGATACTC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGGCTGGAGCTGCTCCTaGGTCTTGATGGGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGGWSCS*VLMGPV
Trigger: GACAGGCCCCATCAAGACCCAGGAGCAGCTCCAGCC...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGGCCCTGCAGGGGCATaGGAAGGAACAGATACTGGG +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGGPAGA*EGTDTG
Trigger: CCCAGTATCTGTTCCTTCTCATGCCCCTGCAGGGCC...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGTCTCATCTTCAGTACTaGGTGACCTGTGTGATCCAG +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLSHLQY*VTCVIQ
Trigger: CTGGATCACACAGGTCACTCAGTACTGAAGATGAGA...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGCTCCAGGGGGATCCTTaGACCAGGACTCACTTGGGC +
Preference number: 2 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLLQGDP*TRTHLG
Trigger: GCCCAAGTGAGTCCTGGTCCAAGGATCCCCCTGGAG...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTTGCCCAGCCCTCCCATaGGAGATGCACAGGTCAGAC +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGCPALP*EMHRSD
Trigger: GTCTGACCTGTGCATCTCCCATGGGAGGGCTGGGCA...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATAGCCCCTGGGCAGGCTaGACACACAGTGTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYSPWAG*THSVCS
Trigger: GCTGCAGACACTGTGTGTTCAGCCTGCCCAGGGGCT...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTAGCCCCTGGGCAGGCTaGACACACAGTGTCTGCAGC +
Preference number: 2 (lower is better)
Translates to: NSRHNSARFQHPATFSIFSPWAG*THSVCS
Trigger: GCTGCAGACACTGTGTGTTCAGCCTGCCCAGGGGCT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTCTCTGGGAACAGGCCTaGGTTTGTGATCCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGLWEQA*VCDPSL
Trigger: GAGGCTGGGATCACAAACTCAGGCCTGTTCCCAGAG...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGTGCAAGGAGGGAGTTTaGCTTTCCCCTGCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLCKEGV*LSPAGC
Trigger: GCAGCCTGCAGGGGAAAGGCAAACTCCCTCCTTGCA...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTAGGGAGAGGAGCATGTaGAGCAGGAGCTTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGRERSM*SRSFLR
Trigger: CCTCAGGAAGCTCCTGCTGCACATGCTCCTCTCCCT...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGAAGCAGTCGTTGGCCTaGCAGCCAAGGGGAACACAC +
Preference number: 2 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLKQSLA*QPRGTH
Trigger: GTGTGTTCCCCTTGGCTGCCAGGCCAACGACTGCTT...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGCAGAGAAGCAGTCGTTaGCCTGGCAGCCAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLQRSSR*PGSQGE
Trigger: TTCCCCTTGGCTGCCAGGCCAACGACTGCTTCTCTG...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGAACACGCTCACTTGTaGCAACCCACACACGGCCCA +
Preference number: 2 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLEHAHL*QPTHGP
Trigger: TGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 90 bp CCGACCCAGGGTAATCTTGATCCTGACTCCCAATCAAAGGCGAGTTaGGCCTGTCTTTCAGTTTCATATAAGGGGAATCACATGGTGCAT +
Preference number: 2 (lower is better)
Translates to: PTQGNLDPDSQSKAS*ACLSVSYKGNHMVH
Trigger: ATGCACCATGTGATTCCCCTTATATGAAACTGAAAGACAGGCCAAACTCGCCTTTGATTGGGAGTCAGGATCAAGATTACCCTGGGTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGAGGATCAGGCATTGGTaGTTTTTCATGCTTCCAGTT +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLRIRHW*FFMLPV
Trigger: AACTGGAAGCATGAAAAATCACCAATGCCTGATCCT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGCCCTCCCATGGGAGATaGACAGGTCAGACACAATGC +
Preference number: 2 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLPSHGR*TGQTQC
Trigger: GCATTGTGTCTGACCTGTGCATCTCCCATGGGAGGG...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGAGGGGTCATGCAGTGTaGGAGTCCTCTATGTGGCAG +
Preference number: 2 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLRGHAV*ESSMWQ
Trigger: CTGCCACATAGAGGACTCCCACACTGCATGACCCCT...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGATTCAGGCCCCGCATaGCTATGTCTCTTCACGGAG +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGDSGPA*LCLFTE
Trigger: CTCCGTGAAGAGACATAGCCATGCGGGGCCTGAATC...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACAAGGCCACCAAAGTTTaGCTCTTCTTTCCTAGAACC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHKATKV*LFFPRT
Trigger: GGTTCTAGGAAAGAAGAGCCAAACTTTGGTGGCCTT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACACCTTTGAAGGTCCATaGAAACCTCACCTACAAAGC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHTFEGP*KPHLQS
Trigger: GCTTTGTAGGTGAGGTTTCCATGGACCTTCAAAGGT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACAGATCTGATGTGGAGTaGTGTTTGCCTTGCCTTATC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHRSDVE*CLPCLI
Trigger: GATAAGGCAAGGCAAACACCACTCCACATCAGATCT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTGCAAGGAGGGAGTTTaGCTTTCCCCTGCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYCKEGV*LSPAGC
Trigger: GCAGCCTGCAGGGGAAAGGCAAACTCCCTCCTTGCA...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACATCTGTCTTCTTCCTTaGAGTTTGGAGTCAGATTGC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHICLLP*SLESDC
Trigger: GCAATCTGACTCCAAACTGCAAGGAAGAAGACAGAT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTAGATCTGTCTCTGTGTaGCCCAGACCAGCCCCATCG +
Preference number: 2 (lower is better)
Translates to: NSRHNSARFQHPATFSIFRSVSV*PRPAPS
Trigger: CGATGGGGCTGGTCTGGGCCACACAGAGACAGATCT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCTCGCAAGGCCGAGCTaGCCTCTAGCTCTGAATGCA +
Preference number: 2 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYLARPS*PLALNA
Trigger: TGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCCCCCAACCAGCACCTaGCAGCCTGCAAAGTCTCAA +
Preference number: 2 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYPPTST*QPAKSQ
Trigger: TTGAGACTTTGCAGGCTGCCAGGTGCTGGTTGGGGG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTGATATGGGTTTGGGATaGGGGGTCATGCAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: NSRHNSARFQHPATFSIFDMGLG*GVMQCG
Trigger: CCCACACTGCATGACCCCTCATCCCAAACCCATATC...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGGTTGCTGTGAGAATTaGATGACTAATTATGTAGAG +
Preference number: 2 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLGCCEN*MTNYVE
Trigger: CTCTACATAATTAGTCATTCAATTCTCACAGCAACC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTGCGAAGACAGCAGGATaGAGAGAAGCAGTCGTTGGC +
Preference number: 2 (lower is better)
Translates to: NSRHNSARFQHPATFSIFAKTAG*REAVVG
Trigger: GCCAACGACTGCTTCTCTGCATCCTGCTGTCTTCGC...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGGGAAAGAGTCCTGGTaGATATGGGTTTGGGATGAG +
Preference number: 2 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLGKESW*IWVWDE
Trigger: CTCATCCCAAACCCATATCCACCAGGACTCTTTCCC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTCCCCTCATGTGGTCCTaGAGCATAGAACTGACCCTC +
Preference number: 2 (lower is better)
Translates to: NSRHNSARFQHPATFSIFPLMWS*SIELTL
Trigger: GAGGGTCAGTTCTATGCTCCAGGACCACATGAGGGG...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACGTCTGGCTGCTTCTGTaGAACCATAAACTTCTTATT +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHVWLLL*NHKLLI
Trigger: AATAAGAAGTTTATGGTTCCACAGAAGCAGCCAGAC...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTAACAACTGGGGAATCTaGGGCTCCAAGAGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGNNWGI*GSKSLH
Trigger: ATGAAGACTCTTGGAGCCTCAGATTCCCCAGTTGTT...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTTTTCATGCTTCCAGTTaGCATCCATTGCCACCAAGG +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGFHASS*HPLPPR
Trigger: CCTTGGTGGCAATGGATGTCAACTGGAAGCATGAAA...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTTGGGATGAGGGGTCATaGAGTGTGGGAGTCCTCTAT +
Preference number: 2 (lower is better)
Translates to: NSRHNSARFQHPATFSIFWDEGS*SVGVLY
Trigger: ATAGAGGACTCCCACACTGCATGACCCCTCATCCCA...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCCGGGCATCATTGGCTaGACATCTCCTTTCCTTGCA +
Preference number: 2 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYPGIIG*TSPFLA
Trigger: TGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACTTGCAGTTGTCTGTTTaGCATATGTGTTACATTTCC +
Preference number: 2 (lower is better)
Translates to: TFPFRGPTHSRADITFSHLQLSV*HMCYIS
Trigger: GGAAATGTAACACATATGCCAAACAGACAACTGCAA...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR GCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTCCAGTGGCTGGTCTTaGACATCCACTTCTAACACC +
Preference number: 2 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYSSGWS*TSTSNT
Trigger: GGTGTTAGAAGTGGATGTGCAAGACCAGCCACTGGA...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTAATTCAGATCTGATGTaGAGTGGTGTTTGCCTTGCC +
Preference number: 2 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGNSDLM*SGVCLA
Trigger: GGCAAGGCAAACACCACTCCACATCAGATCTGAATT...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR TCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGTACTTTCTCCATATTTaGTCTTGGCCAAAAGGCCGA +
Preference number: 2 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLYFLHI*SWPKGR
Trigger: TCGGCCTTTTGGCCAAGATCAAATATGGAGAAAGTA...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCAAGGGAAAGAGTCCTaGTGGATATGGGTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYQGKES*WIWVWD
Trigger: ATCCCAAACCCATATCCACCAGGACTCTTTCCCTTG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTACCTTTGAAGGTCCATaGAAACCTCACCTACAAAGC +
Preference number: 2 (lower is better)
Translates to: NSRHNSARFQHPATFSIFTFEGP*KPHLQS
Trigger: GCTTTGTAGGTGAGGTTTCCATGGACCTTCAAAGGT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 72 bp CCGCATGCCTGCGAGCACAGCCCATGCACCCTCCCGTaGTGCCCTGGAAGTGGAGGTGCCAGCCCGGCCTCA +
Preference number: 3 (lower is better)
Translates to: PHACEHSPCTLP*CPGSGGASPAS
Trigger: TGAGGCCGGGCTGGCACCTCCACTTCCAGGGCATCACGGGAGGGTGCATGGGCTGTGCTCGCAGGCATGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp GGCCGTGGCCAGGGGCTGCGGTGGAGCCCACTGAACTaGGGCTCTCCAGGGGGATCCTTGGACCAGGACTCA +
Preference number: 3 (lower is better)
Translates to: GRGQGLRWSPLN*GSPGGSLDQDS
Trigger: TGAGTCCTGGTCCAAGGATCCCCCTGGAGAGCCGCAGTTCAGTGGGCTCCACCGCAGCCCCTGGCCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACTGGACCAGGACTCACTaGGGCCGAGGACTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHWTRTH*GRGLPE
Trigger: CTCAGGAAGTCCTCGGCCCAAGTGAGTCCTGGTCCA...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 72 bp CCCTCCCACCCCGGGCAGCAGGGTGAGCCCAAAGAATaGCTCAGAAGCGGGTGCTCTGGTAGCGCAGCCGCC +
Preference number: 3 (lower is better)
Translates to: PSHPGQQGEPKE*LRSGCSGSAAA
Trigger: GGCGGCTGCGCTACCAGAGCACCCGCTTCTGAGTCATTCTTTGGGCTCACCCTGCTGCCCGGGGTGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp CCACTACCCTTCACCGGGCTGCCTCTGGGTCCCGCATaGCTGCGAGCACAGCCCATGCACCCTCCCGTGATG +
Preference number: 3 (lower is better)
Translates to: PLPFTGLPLGPA*LRAQPMHPPVM
Trigger: CATCACGGGAGGGTGCATGGGCTGTGCTCGCAGGCATGCGGGACCCAGAGGCAGCCCGGTGAAGGGTAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp AGTCGAGTCCCCCACTACCCTTCACCGGGCTGCCTCTaGGTCCCGCATGCCTGCGAGCACAGCCCATGCACC +
Preference number: 3 (lower is better)
Translates to: SRVPHYPSPGCL*VPHACEHSPCT
Trigger: GGTGCATGGGCTGTGCTCGCAGGCATGCGGGACCCAGAGGCAGCCCGGTGAAGGGTAGTGGGGGACTCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp GGCCTGTCCCTGGCTGGCAAGGTGGGTGCAGGGACATaGCTACAGCCAGACCCCGGAGAGACAGGCCACCAC +
Preference number: 3 (lower is better)
Translates to: GLSLAGKVGAGT*LQPDPGETGHH
Trigger: GTGGTGGCCTGTCTCTCCGGGGTCTGGCTGTAGCCATGTCCCTGCACCCACCTTGCCAGCCAGGGACAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp GAAGCGGGTGCTCTGGTAGCGCAGCCGCCGCAGGTCTaGAAGGCCCTCACTCCGGCCATACACCTCCCTACA +
Preference number: 3 (lower is better)
Translates to: EAGALVAQPPQV*KALTPAIHLPT
Trigger: TGTAGGGAGGTGTATGGCCGGAGTGAGGGCCTTGCAGACCTGCGGCGGCTGCGCTACCAGAGCACCCGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp ACAGTGAGTCGAGTCCCCCACTACCCTTCACCGGGCTaGCTCTGGGTCCCGCATGCCTGCGAGCACAGCCCA +
Preference number: 3 (lower is better)
Translates to: TVSRVPHYPSPG*LWVPHACEHSP
Trigger: TGGGCTGTGCTCGCAGGCATGCGGGACCCAGAGGCAGCCCGGTGAAGGGTAGTGGGGGACTCGACTCACTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp GCACAGCCCATGCACCCTCCCGTGATGCCCTGGAAGTaGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGG +
Preference number: 3 (lower is better)
Translates to: AQPMHPPVMPWK*RCQPGLKTQAW
Trigger: CCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAGGGCATCACGGGAGGGTGCATGGGCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp CCCATGCACCCTCCCGTGATGCCCTGGAAGTGGAGGTaGCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: PMHPPVMPWKWR*QPGLKTQAWLQ
Trigger: TTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAGGGCATCACGGGAGGGTGCATGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp CCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTaGGGGACGTGTCACAACAGCCATAGTTCTTTCTGT +
Preference number: 3 (lower is better)
Translates to: PCGWQWLPTGEP*GTCHNSHSSFC
Trigger: ACAGAAAGAACTATGGCTGTTGTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACTGCAAAGTCTCAAAGTaGGATGCTTCTCGCAAGGCC +
Preference number: 3 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHCKVSK*DASRKA
Trigger: GGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGCA...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGCAGAGAAGCAGTCGTaGGCCTGGCAGCCAAGGGGA +
Preference number: 3 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPAEKQS*AWQPRG
Trigger: TCCCCTTGGCTGCCAGGCCAACGACTGCTTCTCTGC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 72 bp GCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGTaGGTCCAGGCTGCACACAGCTCACTGCAGCCCTTA +
Preference number: 3 (lower is better)
Translates to: ATHTRPRFQQRE*VQAAHSSLQPL
Trigger: TAAGGGCTGCAGTGAGCTGTGTGCAGCCTGGACTCACTCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 72 bp ACAGCTCCCAACCACGGCACCCGTCTCCCCACACCTTaGATTTGGTGGAGGCAGGATCATAGACAGGCCGGG +
Preference number: 3 (lower is better)
Translates to: TAPNHGTRLPTP*IWWRQDHRQAG
Trigger: CCCGGCCTGTCTATGATCCTGCCTCCACCAAATTCAAGGTGTGGGGAGACGGGTGCCGTGGTTGGGAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp GCCACGGGACGCAGGGCCCAAGGGAAAGAGTCCTGGTaGATATGGGTTTGGGATGAGGGGTCATGCAGTGTG +
Preference number: 3 (lower is better)
Translates to: ATGRRAQGKESW*IWVWDEGSCSV
Trigger: CACACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGGCCCTGCGTCCCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp GAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATaGAGTGTGGGAGTCCTCTATGTGGCAGGCCTCGGC +
Preference number: 3 (lower is better)
Translates to: ESWWIWVWDEGS*SVGVLYVAGLG
Trigger: GCCGAGGCCTGCCACATAGAGGACTCCCACACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACTGCAGCCCCGTTGTCTaGTCATGGGGAGCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNCSPVV*SWGAER
Trigger: CCTCTCAGCTCCCCATGACAAGACAACGGGGCTGCA...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAATGGACCAGGACTCACTaGGGCCGAGGACTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREWTRTH*GRGLPE
Trigger: CTCAGGAAGTCCTCGGCCCAAGTGAGTCCTGGTCCA...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGCCGTCTCCCCACACCTaGAATTTGGTGGAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: PALILENTLTCGNPHTAQPSPHT*NLVEAG
Trigger: TCCTGCCTCCACCAAATTCAAGGTGTGGGGAGACGG...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACGTGTCTGCAGCCCCGTaGTCTTGTCATGGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHVSAAP*SCHGEL
Trigger: CAGCTCCCCATGACAAGACAACGGGGCTGCAGACAC...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 72 bp ACAGGCCCTTTGAACATCCTCTTGGAGGAAGAGTTGTaGGCTTGGTGCAGGCTGCCCTTGGCACTGCCAGGG +
Preference number: 3 (lower is better)
Translates to: TGPLNILLEEEL*AWCRLPLALPG
Trigger: CCCTGGCAGTGCCAAGGGCAGCCTGCACCAAGCTCACAACTCTTCCTCCAAGAGGATGTTCAAAGGGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp CCAACCAGCACCTGGCAGCCTGCAAAGTCTCAAAGTTaGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCT +
Preference number: 3 (lower is better)
Translates to: PTSTWQPAKSQS*MLLARPSWPLA
Trigger: AGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGCAGGCTGCCAGGTGCTGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp TGCTCCTCTGGGCCTCAGAAGCCGGGCATCATTGGCTaGACATCTCCTTTCCTTGCAAGGAGGGAGTTTGCC +
Preference number: 3 (lower is better)
Translates to: CSSGPQKPGIIG*TSPFLARREFA
Trigger: GGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGCCCAGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp CCAGTTCAGGCAGCTGAGTATCCCCTCATGTGGTCCTaGAGCATAGAACTGACCCTCCATCGTCACGGGGCA +
Preference number: 3 (lower is better)
Translates to: PVQAAEYPLMWS*SIELTLHRHGA
Trigger: TGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGGGGATACTCAGCTGCCTGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGTCTCTGGGTAGGCCCTaGTATCCTACATGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: PALILENTLTCGNPHTAQSLGRP*YPTCCS
Trigger: GGAGCAGCATGTAGGATACAAGGGCCTACCCAGAGA...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACTGGCTGGGGCCTCACTaGGGACCTCGGGGACAGTCT +
Preference number: 3 (lower is better)
Translates to: TFPFRGPTHSRADITFSHWLGPH*GPRGQS
Trigger: AGACTGTCCCCGAGGTCCCAAGTGAGGCCCCAGCCA...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp ACCCGACGCAGCTCCAGGATCCTGCATGCGAAGTTCTaGTGTCCAGCAGATGCTGAAATGACAGGCCCTTTG +
Preference number: 3 (lower is better)
Translates to: TRRSSRILHAKF*CPADAEMTGPL
Trigger: CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGATCCTGGAGCTGCGTCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACGCAGAGAAGCAGTCGTaGGCCTGGCAGCCAAGGGGA +
Preference number: 3 (lower is better)
Translates to: TFPFRGPTHSRADITFSHAEKQS*AWQPRG
Trigger: TCCCCTTGGCTGCCAGGCCAACGACTGCTTCTCTGC...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGATCTGTCTTCTTCCTaGCAGTTTGGAGTCAGATTG +
Preference number: 3 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPDLSSS*QFGVRL
Trigger: CAATCTGACTCCAAACTGCAAGGAAGAAGACAGATC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 72 bp CATCCTGCTCCCCATGTCAGGTCCAGTTCAGGCAGCTaGGTATCCCCTCATGTGGTCCTGGAGCATAGAACT +
Preference number: 3 (lower is better)
Translates to: HPAPHVRSSSGS*VSPHVVLEHRT
Trigger: AGTTCTATGCTCCAGGACCACATGAGGGGATACTCAGCTGCCTGAACTGGACCTGACATGGGGAGCAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp AGGGCCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTaGGATGAGGGGTCATGCAGTGTGGGAGTCCTCTAT +
Preference number: 3 (lower is better)
Translates to: RAQGKESWWIWV*DEGSCSVGVLY
Trigger: ATAGAGGACTCCCACACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp GAAACTGGCTGTAGTTCAGGAGATTCAGGCCCCGCATaGCTATGTCTCTTCACGGAGTTTCCCAGACCCCCA +
Preference number: 3 (lower is better)
Translates to: ETGCSSGDSGPA*LCLFTEFPRPP
Trigger: TGGGGGTCTGGGAAACTCCGTGAAGAGACATAGCCATGCGGGGCCTGAATCTCCTGAACTACAGCCAGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp TCGCCCGAGAAGGCTCATGCGGAAACCTCCGAAGGCTaGGCTCTGAAAGGAAGGAAAGAAACCGACATTACC +
Preference number: 3 (lower is better)
Translates to: SPEKAHAETSEG*ALKGRKETDIT
Trigger: GGTAATGTCGGTTTCTTTCCTTCCTTTCAGAGCCCAGCCTTCGGAGGTTTCCGCATGAGCCTTCTCGGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAGACAGGGGGCATAGGTaGATGGCCCACAGGAAATAT +
Preference number: 3 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLDRGHR*MAHRKY
Trigger: ATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTC...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGTGCAAAGTCTCAAAGTaGGATGCTTCTCGCAAGGCC +
Preference number: 3 (lower is better)
Translates to: PALILENTLTCGNPHTAQCKVSK*DASRKA
Trigger: GGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGCA...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGAGAGAACACGCTCACTaGTGGCAACCCACACACGGC +
Preference number: 3 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLREHAH*WQPTHG
Trigger: GCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 72 bp GGTCTTGCACATCCACTTCTAACACCTCCCGCCAACTaGGATAGGCAGCCCCCTTCATTTCATCTTCGGGAC +
Preference number: 3 (lower is better)
Translates to: GLAHPLLTPPAN*DRQPPSFHLRD
Trigger: GTCCCGAAGATGAAATGAAGGGGGCTGCCTATCTCAGTTGGCGGGAGGTGTTAGAAGTGGATGTGCAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 72 bp GATGTGGAGTGGTGTTTGCCTTGCCTTATCCCTGGGTaGATGGTAAAGCCCAAACCAGGTGGTGATGCCTCC +
Preference number: 3 (lower is better)
Translates to: DVEWCLPCLIPG*MVKPKPGGDAS
Trigger: GGAGGCATCACCACCTGGTTTGGGCTTTACCATTCACCCAGGGATAAGGCAAGGCAAACACCACTCCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp TTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATaGAAACCTCACCTACAAAGCCTTAAAGAGCCCCAG +
Preference number: 3 (lower is better)
Translates to: FPLQAAGTFEGP*KPHLQSLKEPQ
Trigger: CTGGGGCTCTTTAAGGCTTTGTAGGTGAGGTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGAGGCTGCTGGCACCTTaGAAGGTCCATGGAAACCTC +
Preference number: 3 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLRLLAP*KVHGNL
Trigger: GAGGTTTCCATGGACCTTCAAAGGTGCCAGCAGCCT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACAAGAGGCTGGAGCCGTaGTCCCCACAGTCTGATGAG +
Preference number: 3 (lower is better)
Translates to: TFPFRGPTHSRADITFSHKRLEP*SPQSDE
Trigger: CTCATCAGACTGTGGGGACAACGGCTCCAGCCTCTT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp TTCTTTCTGTCTCCACCTTTGATTCCCCGAGTGCAGTaGATAATCCTGCCACTCAGTGGCACCTCGAGCTTC +
Preference number: 3 (lower is better)
Translates to: FFLSPPLIPRVQ*IILPLSGTSSF
Trigger: GAAGCTCGAGGTGCCACTGAGTGGCAGGATTATGCACTGCACTCGGGGAATCAAAGGTGGAGACAGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGACAGGGGGCATAGGTaGATGGCCCACAGGAAATAT +
Preference number: 3 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLDRGHR*MAHRKY
Trigger: ATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGGACATCTCCTTTCCTaGCAAGGAGGGAGTTTGCCT +
Preference number: 3 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLGHLLS*QGGSLP
Trigger: AGGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTCC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGTTTCTGTCTCCACCTTaGATTCCCCGAGTGCAGTGC +
Preference number: 3 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLFLSPP*IPRVQC
Trigger: GCACTGCACTCGGGGAATCAAAGGTGGAGACAGAAA...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACAGGGGCAAGGGGCTTTaGGACATTTACTTACAGGGG +
Preference number: 3 (lower is better)
Translates to: TFPFRGPTHSRADITFSHRGKGL*DIYLQG
Trigger: CCCCTGTAAGTAAATGTCCAAAAGCCCCTTGCCCCT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACAAAGCAGGCCTCTCTTaGACTCCAGAGAGCTACCTC +
Preference number: 3 (lower is better)
Translates to: TFPFRGPTHSRADITFSHKAGLS*TPESYL
Trigger: GAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGTCTCCAGGGGGATCCTaGGACCAGGACTCACTTGGG +
Preference number: 3 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLSPGGS*DQDSLG
Trigger: CCCAAGTGAGTCCTGGTCCAAGGATCCCCCTGGAGA...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp ATTAGAGATGCTGAGGTGTCTGCCTCTTCAGTAGACTaGAAGCTCCAAGAAGACAGAGTTCATCCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: IRDAEVSASSVD*KLQEDRVHPAP
Trigger: GGGAGCAGGATGAACTCTGTCTTCTTGGAGCTTGCAGTCTACTGAAGAGGCAGACACCTCAGCATCTCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp GCACCTGAATGCAGTCGGGTCGAGGTTAAGAACTCCTaGTGTGAACCTGGGCTGTTTTCAGATTTTCTTAGG +
Preference number: 3 (lower is better)
Translates to: APECSRVEVKNS*CEPGLFSDFLR
Trigger: CCTAAGAAAATCTGAAAACAGCCCAGGTTCACACCAGGAGTTCTTAACCTCGACCCGACTGCATTCAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGAAGAGGCTGGAGCCGTaGTCCCCACAGTCTGATGAG +
Preference number: 3 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLKRLEP*SPQSDE
Trigger: CTCATCAGACTGTGGGGACAACGGCTCCAGCCTCTT...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGATCTGTCTTCTTCCTaGCAGTTTGGAGTCAGATTG +
Preference number: 3 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLDLSSS*QFGVRL
Trigger: CAATCTGACTCCAAACTGCAAGGAAGAAGACAGATC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp AGCCAAGGGGAACACACAAACACACTCACACACACATaGACTCACCTGCATACACACACACTCATACACATG +
Preference number: 3 (lower is better)
Translates to: SQGEHTNTLTHT*THLHTHTLIHM
Trigger: CATGTGTATGAGTGTGTGTGTATGCAGGTGAGTGCATGTGTGTGTGAGTGTGTTTGTGTGTTCCCCTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTAGAAGCCGGGCATCATaGGCTGGACATCTCCTTTCC +
Preference number: 3 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGRSRAS*AGHLLS
Trigger: GGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCT...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGAGGGGCAAGGGGCTTTaGGACATTTACTTACAGGGG +
Preference number: 3 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLRGKGL*DIYLQG
Trigger: CCCCTGTAAGTAAATGTCCAAAAGCCCCTTGCCCCT...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGGACATCTCCTTTCCTaGCAAGGAGGGAGTTTGCCT +
Preference number: 3 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLGHLLS*QGGSLP
Trigger: AGGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTCC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACACACGTAACATAGAGTaGCAGTTGTCTGTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: TFPFRGPTHSRADITFSHTRNIE*QLSVWH
Trigger: ATGCCAAACAGACAACTGCAACTCTATGTTACGTGT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp TCAGTGAATTCTCATGAAGTGAGCACCCCGTGTAACTaGCACTCTGATCAAGAAACAGAACATCCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: SVNSHEVSTPCN*HSDQETEHPEL
Trigger: GAGCTCAGGATGTTCTGTTTCTTGATCAGAGTGCCAGTTACACGGGGTGCTCACTTCATGAGAATTCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTAGGCTGCTGGCACCTTaGAAGGTCCATGGAAACCTC +
Preference number: 3 (lower is better)
Translates to: NSRHNSARFQHPATFSIFRLLAP*KVHGNL
Trigger: GAGGTTTCCATGGACCTTCAAAGGTGCCAGCAGCCT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR TCA 72 bp CTCGGGGTAGAACAAACTTCCTATCCCAAAACAGAATaGACCTGCCCTCATATTAGAGAACACGCTCACTTG +
Preference number: 3 (lower is better)
Translates to: LGVEQTSYPKTE*TCPHIREHAHL
Trigger: CAAGTGAGCGTGTTCTCTAATATGAGGGCAGGTTCATTCTGTTTTGGGATAGGAAGTTTGTTCTACCCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTCTTCTTCCTTGCAGTTaGGAGTCAGATTGCCTAGAT +
Preference number: 3 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGLLPCS*ESDCLD
Trigger: ATCTAGGCAATCTGACTCCAAACTGCAAGGAAGAAG...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR-3UTR CAA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTTTGAAAATGGAAGGGTaGAATGCCTCTCAGTCAGAT +
Preference number: 3 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGLKMEG*NASQSD
Trigger: ATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAA...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp ATGGTGCATATGCATTTTTGTGTCTGGCTGCTTCTGTaGAACCATAAACTTCTTATTCAGGTCTCAGGCATT +
Preference number: 3 (lower is better)
Translates to: MVHMHFCVWLLL*NHKLLIQVSGI
Trigger: AATGCCTGAGACCTGAATAAGAAGTTTATGGTTCCACAGAAGCAGCCAGACACAAAAATGCATATGCACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR GCA 72 bp TTTCAGTTTCATATAAGGGGAATCACATGGTGCATATaGATTTTTGTGTCTGGCTGCTTCTGTGGAACCATA +
Preference number: 3 (lower is better)
Translates to: FQFHIRGITWCI*IFVSGCFCGTI
Trigger: TATGGTTCCACAGAAGCAGCCAGACACAAAAATGCATATGCACCATGTGATTCCCCTTATATGAAACTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CCA 72 bp AATGAGGATTTATTGATATCATTAATTGATTACTTTTaGCCTCGCTTTCAGTCCAACCTGTTCCCCCACCCA +
Preference number: 3 (lower is better)
Translates to: NEDLLISLIDYF*PRFQSNLFPHP
Trigger: TGGGTGGGGGAACAGGTTGGACTGAAAGCGAGGCCAAAAGTAATCAATTAATGATATCAATAAATCCTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACCCCTGCGGGTGGCAGTaGCTGCCAACCGGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHPCGWQ*LPTGEP
Trigger: CGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGG...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACCCATGCAGAGGAAGATaGAGTAGGCCGTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHPCRGR*SRPWRR
Trigger: CCTGCGCCACGGCCTACTTCATCTTCCTCTGCATGG...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACCTTCGCCGGAGCTCCTaGAGATTGTGGACCTCGGTG +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHLRRSS*RLWTSV
Trigger: CACCGAGGTCCACAATCTGCAGGAGCTCCGGCGAAG...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS-3UTR CCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACAGATCTGTCTCTGTGTaGCCCAGACCAGCCCCATCG +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHRSVSV*PRPAPS
Trigger: CGATGGGGCTGGTCTGGGCCACACAGAGACAGATCT...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACTCCAGTTCAGGCAGCTaGGTATCCCCTCATGTGGTC +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHSSSGS*VSPHVV
Trigger: GACCACATGAGGGGATACTCAGCTGCCTGAACTGGA...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGAGCCCCAGGCTCTGTaGCCCCCAACCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPEPQAL*PPTSTW
Trigger: CCAGGTGCTGGTTGGGGGGCACAGAGCCTGGGGCTC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGGGCCTGTCCCTGGCTaGCAAGGTGGGTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPGPVPG*QGGCRD
Trigger: GTCCCTGCACCCACCTTGCCAGCCAGGGACAGGCCC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTCACCCCCACCGCTGCTaGTGCCACTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPHPHRC*CHCRCC
Trigger: GCAGCAGCGGCAGTGGCAGCAGCAGCGGTGGGGGTG...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGAGCCCCAGGCTCTGTaGCCCCCAACCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGEPQAL*PPTSTW
Trigger: CCAGGTGCTGGTTGGGGGGCACAGAGCCTGGGGCTC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTTGGGTCCCGCATGCCTaGGAGCACAGCCCATGCACC +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPWVPHA*EHSPCT
Trigger: GGTGCATGGGCTGTGCTCGCAGGCATGCGGGACCCA...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGATCACCGGGCTGCCTCTaGGTCCCGCATGCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGSPGCL*VPHACE
Trigger: CTCGCAGGCATGCGGGACCCAGAGGCAGCCCGGTGA...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACCCCTGCGGGTGGCAGTaGCTGCCAACCGGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNPCGWQ*LPTGEP
Trigger: CGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGG...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp GCGGCTCTCCAGGGGGATCCTTGGACCAGGACTCACTaGGGCCGAGGACTTCCTGAGGCTGCAAGGACTAGG +
Preference number: 4 (lower is better)
Translates to: AALQGDPWTRTH*GRGLPEAARTR
Trigger: CCTAGTCCTTGCAGCCTCAGGAAGTCCTCGGCCCAAGTGAGTCCTGGTCCAAGGATCCCCCTGGAGAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGATCCCCAGGCCCACAGTaGGTCGAGTCCCCCACTACC +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGSPGPQ*VESPTT
Trigger: GGTAGTGGGGGACTCGACTCACTGTGGGCCTGGGGA...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACCTGTCCAGCAGATGCTaGAATGACAGGCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHLSSRC*NDRPFE
Trigger: TTCAAAGGGCCTGTCATTTCAGCATCTGCTGGACAG...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGACACCCCCACCGCTGCTaGTGCCACTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGHPHRC*CHCRCC
Trigger: GCAGCAGCGGCAGTGGCAGCAGCAGCGGTGGGGGTG...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACCAGCCGCCGCAGGTCTaGAAGGCCCTCACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNQPPQV*KALTPA
Trigger: GGCCGGAGTGAGGGCCTTGCAGACCTGCGGCGGCTG...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACGGGAAAGAGTCCTGGTaGATATGGGTTTGGGATGAG +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHGKESW*IWVWDE
Trigger: CTCATCCCAAACCCATATCCACCAGGACTCTTTCCC...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGGCTGGGGCCTCACTTaGGACCTCGGGGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGGWGLT*DLGDSL
Trigger: CAGACTGTCCCCGAGGTCCCAAGTGAGGCCCCAGCC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTCAGACAGCAGGGTGCTaGCGCAGGGAGAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPQTAGC*RRERSM
Trigger: CATGCTCCTCTCCCTGCGCCAGCACCCTGCTGTCTG...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGGGAAAGGGGGCAGCTaGCACAGCCCTCTGACTCTC +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPGKGGS*HSPLTL
Trigger: GAGAGTCAGAGGGCTGTGCCAGCTGCCCCCTTTCCC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTGACCTTGGTGGCCAGTaGGGCACTTCGCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPDLGGQ*GTSPEL
Trigger: GAGCTCCGGCGAAGTGCCTCACTGGCCACCAAGGTC...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAATGCGGTGGAGCCCACTaGACTGCGGCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRECGGAH*TAALQG
Trigger: CCCCTGGAGAGCCGCAGTTCAGTGGGCTCCACCGCA...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACAACTCTTTAAAATCCTaGTGCCCAAGCTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHNSLKS*CPSCPP
Trigger: TGGGGGACAGCTTGGGCATCAGGATTTTAAAGAGTT...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGACGCTGCCGCGGCTCCTaGAGGCAACGGCCGGGTTTA +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGRCRGS*RQRPGL
Trigger: TAAACCCGGCCGTTGCCTGCAGGAGCCGCGGCAGCG...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS-3UTR GCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGATGCCACTGCCGCTGCTaGTGCCGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGCHCRC*CRCWSC
Trigger: GCAGCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCA...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACTGCTGCCACTGCCGCTaGTGCTGCCGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNCCHCR*CCRCWS
Trigger: GCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCAGCA...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGAGCTTCCTGAGGCATaGCTGAGTGGCTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGELPEA*LSGWGL
Trigger: GAGGCCCCAGCCACTCAGGCATGCCTCAGGAAGCTC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACCAAGGGAAAGAGTCCTaGTGGATATGGGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHQGKES*WIWVWD
Trigger: ATCCCAAACCCATATCCACCAGGACTCTTTCCCTTG...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGATCCCACCTGCTCCTCTaGGCCTCAGAAGCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGSHLLL*ASEAGH
Trigger: ATGCCCGGCTTCTGAGGCCCAGAGGAGCAGGTGGGA...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGGACCAGGACTCACTTaGGCCGAGGACTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPGPGLT*AEDFLR
Trigger: CCTCAGGAAGTCCTCGGCCCAAGTGAGTCCTGGTCC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTGATGGGGCCTGTCCCTaGCTGGCAAGGTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPDGACP*LARWVQ
Trigger: CTGCACCCACCTTGCCAGCCAGGGACAGGCCCCATC...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGGCTGGAGCTGCTCCTaGGTCTTGATGGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGGWSCS*VLMGPV
Trigger: GACAGGCCCCATCAAGACCCAGGAGCAGCTCCAGCC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACAGCACCCCGTGTAACTaGCACTCTGATCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHSTPCN*HSDQET
Trigger: TGTTTCTTGATCAGAGTGCCAGTTACACGGGGTGCT...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGTGAATTGCTGGGGGTaGGAAAGGGGGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPVNCWG*ERGQLA
Trigger: TGCCAGCTGCCCCCTTTCCCACCCCCAGCAATTCAC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAGACCTTGGTGGCCAGTaGGGCACTTCGCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREDLGGQ*GTSPEL
Trigger: GAGCTCCGGCGAAGTGCCTCACTGGCCACCAAGGTC...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTAGGTCAGGAGTGCGCTaGACAGCTCCCAACCACGGC +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPRSGVR*TAPNHG
Trigger: GCCGTGGTTGGGAGCTGTTCAGCGCACTCCTGACCT...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTATGCGGTGGAGCCCACTaGACTGCGGCTCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLCGGAH*TAALQG
Trigger: CCCCTGGAGAGCCGCAGTTCAGTGGGCTCCACCGCA...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACCATGTGTCAGTGTCATaGAGCCAGAGCTCAAATTCA +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHHVSVS*SQSSNS
Trigger: TGAATTTGAGCTCTGGCTTCATGACACTGACACATG...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTGCCACTGCCGCTGCTaGTGCCGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVCHCRC*CRCWSC
Trigger: GCAGCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCA...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAGACAGGCCGGGGCCCTaGAGGGGCATGAGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREDRPGP*RGMRRN
Trigger: GTTCCTTCTCATGCCCCTGCAGGGCCCCGGCCTGTC...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACTGGGTCCCGCATGCCTaGGAGCACAGCCCATGCACC +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNWVPHA*EHSPCT
Trigger: GGTGCATGGGCTGTGCTCGCAGGCATGCGGGACCCA...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTAGGGAGAGGAGCATGTaGAGCAGGAGCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPRERSM*SRSFLR
Trigger: CCTCAGGAAGCTCCTGCTGCACATGCTCCTCTCCCT...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAAGCCAGACAGCAGGGTaGTGGCGCAGGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGSQTAG*WRRERS
Trigger: GCTCCTCTCCCTGCGCCAGCACCCTGCTGTCTGGCT...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGCCCGAGAAGGCTCATaGGGAAACCTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGAREGS*GNLRRL
Trigger: CAGCCTTCGGAGGTTTCCGCATGAGCCTTCTCGGGC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTAAGCAGTCGTTGGCCTaGCAGCCAAGGGGAACACAC +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPKQSLA*QPRGTH
Trigger: GTGTGTTCCCCTTGGCTGCCAGGCCAACGACTGCTT...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGACCCCACCTAAGAGGCTaGAGCCGTTGTCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGPHLRG*SRCPHS
Trigger: ACTGTGGGGACAACGGCTCCAGCCTCTTAGGTGGGG...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACGTGATGCCCTGGAAGTaGAGGTGCCAGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNVMPWK*RCQPGL
Trigger: GAGGCCGGGCTGGCACCTCCACTTCCAGGGCATCAC...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTGGCTGGAGCTGCTCCTaGGTCTTGATGGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPGWSCS*VLMGPV
Trigger: GACAGGCCCCATCAAGACCCAGGAGCAGCTCCAGCC...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAACCAACCGGGGAGCCGTaGGGGACGTGTCACAACAGC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREPTGEP*GTCHNS
Trigger: GCTGTTGTGACACGTCCCCCACGGCTCCCCGGTTGG...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACAGATCTGATGTGGAGTaGTGTTTGCCTTGCCTTATC +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHRSDVE*CLPCLI
Trigger: GATAAGGCAAGGCAAACACCACTCCACATCAGATCT...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAACCCCGGGCAGCAGGGTaGGCCCAAAGAATGACTCAG +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREPRAAG*AQRMTQ
Trigger: CTGAGTCATTCTTTGGGCTCACCCTGCTGCCCGGGG...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGAGCCCCTGGGCAGGCTaGACACACAGTGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQSPWAG*THSVCS
Trigger: GCTGCAGACACTGTGTGTTCAGCCTGCCCAGGGGCT...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAACCATGCACCCTCCCGTaGTGCCCTGGAAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREPCTLP*CPGSGG
Trigger: ACCTCCACTTCCAGGGCATCACGGGAGGGTGCATGG...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACTCCCCAGGCCCACAGTaGGTCGAGTCCCCCACTACC +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHSPGPQ*VESPTT
Trigger: GGTAGTGGGGGACTCGACTCACTGTGGGCCTGGGGA...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTCCGAAGGCTGGGCTCTaGAAGGAAGGAAAGAAACCG +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPPKAGL*KEGKKP
Trigger: CGGTTTCTTTCCTTCCTTTCAGAGCCCAGCCTTCGG...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGCTGGCACAGCCCTCTaGCTCTCTTCACAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGAGTAL*LSSQFP
Trigger: GGGAAACTGTGAAGAGAGTCAGAGGGCTGTGCCAGC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTGCCGCTGCTGGAGCTaGCACTGCTGCACCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVCRCWS*HCCTGP
Trigger: AGGACCGGTGCAGCAGTGGCAGCTCCAGCAGCGGCA...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAGACAGGCCGGGGCCCTaGAGGGGCATGAGAAGGAAC +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTDRPGP*RGMRRN
Trigger: GTTCCTTCTCATGCCCCTGCAGGGCCCCGGCCTGTC...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACACCTCTGGGTCCCGCATaGCTGCGAGCACAGCCCATG +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTPLGPA*LRAQPM
Trigger: CATGGGCTGTGCTCGCAGGCATGCGGGACCCAGAGG...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACGGCTGGCAAGGTGGGTaGAGGGACATGGCTACAGCC +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNGWQGG*RDMATA
Trigger: GGCTGTAGCCATGTCCCTGCACCCACCTTGCCAGCC...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGACAGAGAAGCAGTCGTTaGCCTGGCAGCCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGQRSSR*PGSQGE
Trigger: TTCCCCTTGGCTGCCAGGCCAACGACTGCTTCTCTG...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTACCTCCCGTGATGCCCTaGAAGTGGAGGTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLPPVMP*KWRCQP
Trigger: GGGCTGGCACCTCCACTTCCAGGGCATCACGGGAGG...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACGTGGGTGCAGGGACATaGCTACAGCCAGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNVGAGT*LQPDPG
Trigger: TCCGGGGTCTGGCTGTAGCCATGTCCCTGCACCCAC...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAGTGGGTGCAGGGACATaGCTACAGCCAGACCCCGGA +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGVGAGT*LQPDPG
Trigger: TCCGGGGTCTGGCTGTAGCCATGTCCCTGCACCCAC...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGACCTCGGGGACAGTCTaGCTGAGGCTGGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQTSGTV*LRLELL
Trigger: GAGCAGCTCCAGCCTCAGCCAGACTGTCCCCGAGGT...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGCATGCCTGAGTGGCTaGGGCCTCACTTGGGACCTC +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQACLSG*GLTWDL
Trigger: GAGGTCCCAAGTGAGGCCCCAGCCACTCAGGCATGC...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACGCATGCCTGAGTGGCTaGGGCCTCACTTGGGACCTC +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNACLSG*GLTWDL
Trigger: GAGGTCCCAAGTGAGGCCCCAGCCACTCAGGCATGC...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTCACACACCCGCCCTGTaGCCAAAGGAAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPHTPAL*PKEGSQ
Trigger: CTGGCTTCCTTCCTTTGGCCACAGGGCGGGTGTGTG...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGCCAACCGGGGAGCCGTaGGGGACGTGTCACAACAGC +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVPTGEP*GTCHNS
Trigger: GCTGTTGTGACACGTCCCCCACGGCTCCCCGGTTGG...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGGTGCAGGCTGCCCTTaGCACTGCCAGGGGAATAAA +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGGAGCP*HCQGNK
Trigger: TTTATTCCCCTGGCAGTGCCAAGGGCAGCCTGCACC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp CCCAACCAGCACCTGGCAGCCTGCAAAGTCTCAAAGTaGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PNQHLAACKVSK*DASRKAELASS
Trigger: GCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGCAGGCTGCCAGGTGCTGGTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp CCACCTGCTCCTCTGGGCCTCAGAAGCCGGGCATCATaGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PPAPLGLRSRAS*AGHLLSLQGGS
Trigger: ACTCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGCCCAGAGGAGCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGCCATGCAGAGGAAGATaGAGTAGGCCGTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQPCRGR*SRPWRR
Trigger: CCTGCGCCACGGCCTACTTCATCTTCCTCTGCATGG...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGCCCCGGGCAGCAGGGTaGGCCCAAAGAATGACTCAG +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVPRAAG*AQRMTQ
Trigger: CTGAGTCATTCTTTGGGCTCACCCTGCTGCCCGGGG...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAGGCCCTGCAGGGGCATaGGAAGGAACAGATACTGGG +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGGPAGA*EGTDTG
Trigger: CCCAGTATCTGTTCCTTCTCATGCCCCTGCAGGGCC...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAAGGTCAGGAGTGCGCTaGACAGCTCCCAACCACGGC +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLRSGVR*TAPNHG
Trigger: GCCGTGGTTGGGAGCTGTTCAGCGCACTCCTGACCT...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTCTGCAAGGACTAGGCTaGCTCTCTCTGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPLQGLG*LSLVSG
Trigger: CCCAGAGACCAGAGAGAGTCAGCCTAGTCCTTGCAG...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACTATCCCAAAACAGAATaGACCTGCCCTCATATTAGA +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHYPKTE*TCPHIR
Trigger: TCTAATATGAGGGCAGGTTCATTCTGTTTTGGGATA...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGTTCCTGAGGCATGCCTaGGTGGCTGGGGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQFLRHA*VAGASL
Trigger: AAGTGAGGCCCCAGCCACTCAGGCATGCCTCAGGAA...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTTTGGAGGAAGAGTTGTaGGCTTGGTGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPLEEEL*AWCRLP
Trigger: GGGCAGCCTGCACCAAGCTCACAACTCTTCCTCCAA...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTTGCAAGGAGGGAGTTTaGCTTTCCCCTGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPCKEGV*LSPAGC
Trigger: GCAGCCTGCAGGGGAAAGGCAAACTCCCTCCTTGCA...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTATGGAGCCCACTGAACTaGGGCTCTCCAGGGGGATCC +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLWSPLN*GSPGGS
Trigger: GGATCCCCCTGGAGAGCCGCAGTTCAGTGGGCTCCA...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGGAGTGAGTCCAGGCTaGACACAGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQGVSPG*TQLTAA
Trigger: GGCTGCAGTGAGCTGTGTGCAGCCTGGACTCACTCC...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTCCTTCCCTGGGAATCTaGCTGATCCTAATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPPSLGI*LILIPG
Trigger: TCCTGGGATTAGGATCAGGCAGATTCCCAGGGAAGG...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAGGCTGGCAAGGTGGGTaGAGGGACATGGCTACAGCC +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTGWQGG*RDMATA
Trigger: GGCTGTAGCCATGTCCCTGCACCCACCTTGCCAGCC...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAAGGGGTCATGCAGTGTaGGAGTCCTCTATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGRGHAV*ESSMWQ
Trigger: CTGCCACATAGAGGACTCCCACACTGCATGACCCCT...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTCTCGCAAGGCCGAGCTaGCCTCTAGCTCTGAATGCA +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPLARPS*PLALNA
Trigger: TGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAG...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTCAGAGAAGCAGTCGTTaGCCTGGCAGCCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPQRSSR*PGSQGE
Trigger: TTCCCCTTGGCTGCCAGGCCAACGACTGCTTCTCTG...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACCCCGTTGTCTTGTCATaGGGAGCTGAGAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNPVVLS*GAERGH
Trigger: GTGCCCCCTCTCAGCTCCCCATGACAAGACAACGGG...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACTCCCACCTGCTCCTCTaGGCCTCAGAAGCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHSHLLL*ASEAGH
Trigger: ATGCCCGGCTTCTGAGGCCCAGAGGAGCAGGTGGGA...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGGACCAGGACTCACTTaGGCCGAGGACTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQGPGLT*AEDFLR
Trigger: CCTCAGGAAGTCCTCGGCCCAAGTGAGTCCTGGTCC...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAACTCCAGGGGGATCCTTaGACCAGGACTCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRELQGDP*TRTHLG
Trigger: GCCCAAGTGAGTCCTGGTCCAAGGATCCCCCTGGAG...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACCCCCACCTAAGAGGCTaGAGCCGTTGTCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNPHLRG*SRCPHS
Trigger: ACTGTGGGGACAACGGCTCCAGCCTCTTAGGTGGGG...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTACCCTGGCTGGCAAGGTaGGTGCAGGGACATGGCTAC +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLPWLAR*VQGHGY
Trigger: GTAGCCATGTCCCTGCACCCACCTTGCCAGCCAGGG...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACACCCTGGCTGGCAAGGTaGGTGCAGGGACATGGCTAC +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTPWLAR*VQGHGY
Trigger: GTAGCCATGTCCCTGCACCCACCTTGCCAGCCAGGG...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTGGTGCAGGCTGCCCTTaGCACTGCCAGGGGAATAAA +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPGAGCP*HCQGNK
Trigger: TTTATTCCCCTGGCAGTGCCAAGGGCAGCCTGCACC...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACGTGAATTGCTGGGGGTaGGAAAGGGGGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNVNCWG*ERGQLA
Trigger: TGCCAGCTGCCCCCTTTCCCACCCCCAGCAATTCAC...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGCTGCAAGGACTAGGCTaGCTCTCTCTGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQLQGLG*LSLVSG
Trigger: CCCAGAGACCAGAGAGAGTCAGCCTAGTCCTTGCAG...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGACAGGCCTGAGTTTGTaGTCCCAGCCTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVTGLSL*SQPPCS
Trigger: GCTGCAGGGAGGCTGGGATCACAAACTCAGGCCTGT...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACCTCTGGGAACAGGCCTaGGTTTGTGATCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNLWEQA*VCDPSL
Trigger: GAGGCTGGGATCACAAACTCAGGCCTGTTCCCAGAG...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTTCCAGCAGAGGGAGTaGGTCCAGGCTGCACACAGC +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVFQQRE*VQAAHS
Trigger: GCTGTGTGCAGCCTGGACTCACTCCCTCTGCTGGAA...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACATTCCAGCAGAGGGAGTaGGTCCAGGCTGCACACAGC +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTFQQRE*VQAAHS
Trigger: GCTGTGTGCAGCCTGGACTCACTCCCTCTGCTGGAA...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAATTGGAGGAAGAGTTGTaGGCTTGGTGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRELEEEL*AWCRLP
Trigger: GGGCAGCCTGCACCAAGCTCACAACTCTTCCTCCAA...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGACCTCGAGGTAGGAGCTaGCCCCAATCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGPRGRS*PQSSQP
Trigger: AGGCTGAGAAGATTGGGGGCAGCTCCTACCTCGAGG...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGTGCCGCTGCTGGAGCTaGCACTGCTGCACCGGTCCT +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLCRCWS*HCCTGP
Trigger: AGGACCGGTGCAGCAGTGGCAGCTCCAGCAGCGGCA...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGAGCCAGACAGCAGGGTaGTGGCGCAGGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLSQTAG*WRRERS
Trigger: GCTCCTCTCCCTGCGCCAGCACCCTGCTGTCTGGCT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGCCACAGAAAAGTCCCTaGGGGTGGCAGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVPQKSP*GWQWLP
Trigger: TGGCAGCCACTGCCACCCGCAGGGACTTTTCTGTGG...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAACCAGACTCCACCTTTaGCCCACACCTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRETRLHL*PTPLEA
Trigger: GGCTTCCAGAGGTGTGGGGCAAAGGTGGAGTCTGGT...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGACCAGACTCCACCTTTaGCCCACACCTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQTRLHL*PTPLEA
Trigger: GGCTTCCAGAGGTGTGGGGCAAAGGTGGAGTCTGGT...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTGCAGCTCCAGGATCCTaGATGCGAAGTTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPAAPGS*MRSSAV
Trigger: GACAGCAGAACTTCGCATGCAGGATCCTGGAGCTGC...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGACCCCCAACCAGCACCTaGCAGCCTGCAAAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGPPTST*QPAKSQ
Trigger: TTGAGACTTTGCAGGCTGCCAGGTGCTGGTTGGGGG...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGCTACCTCCAGTGGCTaGTCTTGCACATCCACTTCT +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGATSSG*SCTSTS
Trigger: AGAAGTGGATGTGCAAGACCAGCCACTGGAGGTAGC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACTGCCCAGCCCTCCCATaGGAGATGCACAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHCPALP*EMHRSD
Trigger: GTCTGACCTGTGCATCTCCCATGGGAGGGCTGGGCA...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTATGCCCAGCCCTCCCATaGGAGATGCACAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLCPALP*EMHRSD
Trigger: GTCTGACCTGTGCATCTCCCATGGGAGGGCTGGGCA...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTCCCCTCATGTGGTCCTaGAGCATAGAACTGACCCTC +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPPLMWS*SIELTL
Trigger: GAGGGTCAGTTCTATGCTCCAGGACCACATGAGGGG...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGAGTATCCCCTCATGTaGTCCTGGAGCATAGAACTG +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPEYPLM*SWSIEL
Trigger: CAGTTCTATGCTCCAGGACCACATGAGGGGATACTC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACTTAATTGATTACTTTTaGCCTCGCTTTCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHLIDYF*PRFQSN
Trigger: GTTGGACTGAAAGCGAGGCCAAAAGTAATCAATTAA...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTACACACACCCGCCCTGTaGCCAAAGGAAGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLHTPAL*PKEGSQ
Trigger: CTGGCTTCCTTCCTTTGGCCACAGGGCGGGTGTGTG...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGGGTCTCCGCGGTGCTaGCCCCGGGAGCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLGSPRC*PREQVG
Trigger: GCCCACCTGCTCCCGGGGTCAGCACCGCGGAGACCC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAATCCAGTTCAGGCAGCTaGGTATCCCCTCATGTGGTC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRESSSGS*VSPHVV
Trigger: GACCACATGAGGGGATACTCAGCTGCCTGAACTGGA...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTACTCTGGGAACAGGCCTaGGTTTGTGATCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLLWEQA*VCDPSL
Trigger: GAGGCTGGGATCACAAACTCAGGCCTGTTCCCAGAG...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTCTGTTAAGCGGCCTCTaGGGCTGGATCTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPLLSGL*GWICLL
Trigger: AAGAAGACAGATCCAGCCTCAGAGGCCGCTTAACAG...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTTTTCATGCTTCCAGTTaGCATCCATTGCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPFHASS*HPLPPR
Trigger: CCTTGGTGGCAATGGATGTCAACTGGAAGCATGAAA...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACCCGAAGGCTGGGCTCTaGAAGGAAGGAAAGAAACCG +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNPKAGL*KEGKKP
Trigger: CGGTTTCTTTCCTTCCTTTCAGAGCCCAGCCTTCGG...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACGCTGGCACAGCCCTCTaGCTCTCTTCACAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHAGTAL*LSSQFP
Trigger: GGGAAACTGTGAAGAGAGTCAGAGGGCTGTGCCAGC...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTTGGGATGAGGGGTCATaGAGTGTGGGAGTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPWDEGS*SVGVLY
Trigger: ATAGAGGACTCCCACACTGCATGACCCCTCATCCCA...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGCCCTCCCATGGGAGATaGACAGGTCAGACACAATGC +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQPSHGR*TGQTQC
Trigger: GCATTGTGTCTGACCTGTGCATCTCCCATGGGAGGG...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACTACCCTTCACCGGGCTaGCTCTGGGTCCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: TFPFRGPTHSRADITFSHYPSPG*LWVPHA
Trigger: GGCATGCGGGACCCAGAGGCAGCCCGGTGAAGGGTA...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGCAGCTCCAGGATCCTaGATGCGAAGTTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQAAPGS*MRSSAV
Trigger: GACAGCAGAACTTCGCATGCAGGATCCTGGAGCTGC...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAAGCTCCTGCAGATTGTaGACCTCGGTGGCCATGATC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRESSCRL*TSVAMI
Trigger: GATCATGGCCACCGAGGTCCACAATCTGCAGGAGCT...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS-3UTR CCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTACCCCCAACCAGCACCTaGCAGCCTGCAAAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLPPTST*QPAKSQ
Trigger: TTGAGACTTTGCAGGCTGCCAGGTGCTGGTTGGGGG...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGCATCAACCAGCTGTGTaGCCTAGGGCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQHQPAV*PRASHP
Trigger: TGGGTGACTTGCCCTAGGCCACACAGCTGGTTGATG...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACACTGAGTCAGGAGACCTaGGTTCCAAGCTTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTLSQET*VPSLGP
Trigger: AGGGCCCAAGCTTGGAACCCAGGTCTCCTGACTCAG...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAGAACACGCTCACTTGTaGCAACCCACACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTEHAHL*QPTHGP
Trigger: TGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTC...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTTTTGCCCCACACCTCTaGAAGCCACAGAAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPFAPHL*KPQKSP
Trigger: GGGACTTTTCTGTGGCTTCCAGAGGTGTGGGGCAAA...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGAAACCTCCGAAGGCTaGGCTCTGAAAGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGETSEG*ALKGRK
Trigger: TTTCCTTCCTTTCAGAGCCCAGCCTTCGGAGGTTTC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp AGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTaGCAAGGAGGGAGTTTGCCTTTCCCCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSRASLAGHLLS*QGGSLPFPCRL
Trigger: CAGCCTGCAGGGGAAAGGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp GAGTGGGCACTGAGTCAGGAGACCTGGGTTCCAAGCTaGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: EWALSQETWVPS*GPVIINQLCGL
Trigger: TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTCCTGACTCAGTGCCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGGACCTCGGTGGCCATaGTCCGGGGGCGCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLGPRWP*SGGARR
Trigger: CCTCCGAGCGCCCCCGGATCATGGCCACCGAGGTCC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGGATATGGGTTTGGGATaGGGGGTCATGCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVDMGLG*GVMQCG
Trigger: CCCACACTGCATGACCCCTCATCCCAAACCCATATC...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACGCAGCAGGAGCTTCCTaGGGCATGCCTGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TFPFRGPTHSRADITFSHAAGAS*GMPEWL
Trigger: CAGCCACTCAGGCATGCCTCAGGAAGCTCCTGCTGC...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGATTCCTCCATTGTCCCTaGTTCAAAACCCGACGCAGC +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGFLHCP*FKTRRS
Trigger: GCTGCGTCGGGTTTTGAATCAGGGACAATGGAGGAA...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACGCGAAGACAGCAGGATaGAGAGAAGCAGTCGTTGGC +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHAKTAG*REAVVG
Trigger: GCCAACGACTGCTTCTCTGCATCCTGCTGTCTTCGC...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAAGCTTCCCATCTGGGTaGCATCCCTGTGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGSFPSG*HPCGNR
Trigger: TCTGTTACCACAGGGATGGCACCCAGATGGGAAGCT...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGCGGGTGGCAGTGGCTaGCAACCGGGGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLAGGSG*QPGSRG
Trigger: CCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGCCCGAGAAGGCTCATaGGGAAACCTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLAREGS*GNLRRL
Trigger: CAGCCTTCGGAGGTTTCCGCATGAGCCTTCTCGGGC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAGAGTCCTGGTGGATATaGGTTTGGGATGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREESWWI*VWDEGS
Trigger: TGACCCCTCATCCCAAACCCATATCCACCAGGACTC...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTGCAAAGTCTCAAAGTTaGATGCTTCTCGCAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPAKSQS*MLLARP
Trigger: CGGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGC...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACCCGGGCATCATTGGCTaGACATCTCCTTTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNPGIIG*TSPFLA
Trigger: TGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGG...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACGAGAGCTACCTCCAGTaGCTGGTCTTGCACATCCAC +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHESYLQ*LVLHIH
Trigger: GTGGATGTGCAAGACCAGCCACTGGAGGTAGCTCTC...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACCATCAACCAGCTGTGTaGCCTAGGGCAAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHHQPAV*PRASHP
Trigger: TGGGTGACTTGCCCTAGGCCACACAGCTGGTTGATG...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTGTTTGGATTCAAATCTaGCCTCGGGGTAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPVWIQI*PRGRTN
Trigger: GTTTGTTCTACCCCGAGGCCAGATTTGAATCCAAAC...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGCTCAAAACCCAGGCATaGCTCCAAGTCCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVLKTQA*LQVLPW
Trigger: CCAGGGAAGGACTTGGAGCCATGCCTGGGTTTTGAG...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp GCTGCTCCCATGTCTGGTAGAAAAGCAGGCCTCTCTTaGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: AAPMSGRKAGLS*TPESYLQWLVL
Trigger: CAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTTTCTACCAGACATGGGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp TCCCCATCCATTCGCTACCCCCGACCCAGGGTAATCTaGATCCTGACTCCCAATCAAAGGCGAGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPSIRYPRPRVI*ILTPNQRRVWP
Trigger: AGGCCAAACTCGCCTTTGATTGGGAGTCAGGATCAAGATTACCCTGGGTCGGGGGTAGCGAATGGATGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTAGCGGGAAATCTTCTTaGGAACCTTCTCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPSGKSS*EPSHSG
Trigger: CCCACTATGAGAAGGTTCTCAAGAAGATTTCCCGCT...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGACACATAATATGCACCTaGATGCAGTCGGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGHIICT*MQSGRG
Trigger: ACCTCGACCCGACTGCATTCAGGTGCATATTATGTG...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTTGGCCAGTTTCTTACTaGCTCCTCAAAACCAATTGT +
Preference number: 4 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPWPVSY*LLKTNC
Trigger: ACAATTGGTTTTGAGGAGTCAGTAAGAAACTGGCCA...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTTCCTCCATTGTCCCTaGTTCAAAACCCGACGCAGC +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVFLHCP*FKTRRS
Trigger: GCTGCGTCGGGTTTTGAATCAGGGACAATGGAGGAA...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGTCTCTTCAAAGAGCTaGCGCTCGATCCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLVSSKS*RSIRLS
Trigger: GGACAGCCGGATCGAGCGGCAGCTCTTTGAAGAGAC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAAATCTTCTCAGCCTCTaGGTAAAATCCGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGNLLSL*VKSVEG
Trigger: ACCCTCAACGGATTTTACGCAGAGGCTGAGAAGATT...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAACACTTGTGCACTGGTaGACACACATGCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLTLVHW*THMRSH
Trigger: GTGTGAGCGCATGTGTGTGCACCAGTGCACAAGTGT...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACAGACAGAGTTCATCCTaGTCCCCATGTCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHRQSSS*SPCQVQ
Trigger: CTGGACCTGACATGGGGAGCAGGATGAACTCTGTCT...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTACCTTCCCTGGGAATCTaGCTGATCCTAATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLPSLGI*LILIPG
Trigger: TCCTGGGATTAGGATCAGGCAGATTCCCAGGGAAGG...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAATTCCCCGAGTGCAGTaGATAATCCTGCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGIPRVQ*IILPLS
Trigger: ACTGAGTGGCAGGATTATGCACTGCACTCGGGGAAT...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAGCAAAGTCTCAAAGTTaGATGCTTCTCGCAAGGCCG +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGAKSQS*MLLARP
Trigger: CGGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGC...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGAACACGCTCACTTGTaGCAACCCACACACGGCCCA +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLEHAHL*QPTHGP
Trigger: TGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTaGAAGGTCCATGGAAACCTCACCTACAAAGCCTTA +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAP*KVHGNLTYKAL
Trigger: TAAGGCTTTGTAGGTGAGGTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGCTCAAATTCAGATCTaGTGTGGAGTGGTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQAQIQI*CGVVFA
Trigger: GGCAAACACCACTCCACATCAGATCTGAATTTGAGC...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAAACAACTGGGGAATCTaGGGCTCCAAGAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGNNWGI*GSKSLH
Trigger: ATGAAGACTCTTGGAGCCTCAGATTCCCCAGTTGTT...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGGTTGCATACCCCTTTaGGAATCTGCTGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQGCIPL*ESAESC
Trigger: ACAGCTTTCAGCAGATTCTCAAAGGGGTATGCAACC...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGCTGTCCAGCAGATGCTaGAATGACAGGCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVLSSRC*NDRPFE
Trigger: TTCAAAGGGCCTGTCATTTCAGCATCTGCTGGACAG...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATGGCCCGATCGCCCGCTaGCGCGGCTCCTGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYGPIAR*RGSCRQ
Trigger: TTGCCTGCAGGAGCCGCGGCAGCGGGCGATCGGGCC...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS-3UTR GCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTTGCTGCCACTGCCGCTaGTGCTGCCGCTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGCCHCR*CCRCWS
Trigger: GCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCAGCA...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACAGTCTCAAAGTTGGATaGTTCTCGCAAGGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHSLKVG*FSQGRA
Trigger: AGCTCGGCCTTGCGAGAAGCATCCAACTTTGAGACT...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGACATCTCCTTTCCTTaGAAGGAGGGAGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQDISFP*KEGVCL
Trigger: AAGGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTC...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCCCTCCCATGGGAGATaGACAGGTCAGACACAATGC +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLPSHGR*TGQTQC
Trigger: GCATTGTGTCTGACCTGTGCATCTCCCATGGGAGGG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACGCCTCTTCAGTAGACTaGAAGCTCCAAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNASSVD*KLQEDR
Trigger: TCTGTCTTCTTGGAGCTTGCAGTCTACTGAAGAGGC...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAGCCTCTTCAGTAGACTaGAAGCTCCAAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREASSVD*KLQEDR
Trigger: TCTGTCTTCTTGGAGCTTGCAGTCTACTGAAGAGGC...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAATTCCCCGAGTGCAGTaGATAATCCTGCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTIPRVQ*IILPLS
Trigger: ACTGAGTGGCAGGATTATGCACTGCACTCGGGGAAT...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTACTGCATGCGAAGTTCTaGTGTCCAGCAGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLLHAKF*CPADAE
Trigger: TTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAG...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTCTGGAACTGACAGATaGTCCCATCGCTGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVSGTDR*SHRCSL
Trigger: GAGACTACAGCGATGGGACCATCTGTCAGTTCCAGA...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTATGGTGGATATGGGTTTaGGATGAGGGGTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLWWIWV*DEGSCS
Trigger: ACTGCATGACCCCTCATCCCAAACCCATATCCACCA...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAGGGAAAGAGTCCTGGTaGATATGGGTTTGGGATGAG +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTGKESW*IWVWDE
Trigger: CTCATCCCAAACCCATATCCACCAGGACTCTTTCCC...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAAGCACCCCGTGTAACTaGCACTCTGATCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGSTPCN*HSDQET
Trigger: TGTTTCTTGATCAGAGTGCCAGTTACACGGGGTGCT...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACGAGGTTAAGAACTCCTaGTGTGAACCTGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNEVKNS*CEPGLF
Trigger: AAACAGCCCAGGTTCACACCAGGAGTTCTTAACCTC...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACACTGCGTAAAATCCGTTaGGGGTCTTCACAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTLRKIR*GSSQSL
Trigger: AAGAGACTGTGAAGACCCTCAACGGATTTTACGCAG...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAAGCGGGAAATCTTCTTaGGAACCTTCTCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLSGKSS*EPSHSG
Trigger: CCCACTATGAGAAGGTTCTCAAGAAGATTTCCCGCT...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTCTCATCTTCAGTACTaGGTGACCTGTGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVSHLQY*VTCVIQ
Trigger: CTGGATCACACAGGTCACTCAGTACTGAAGATGAGA...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACATCTCATCTTCAGTACTaGGTGACCTGTGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTSHLQY*VTCVIQ
Trigger: CTGGATCACACAGGTCACTCAGTACTGAAGATGAGA...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGAACAACTGGGGAATCTaGGGCTCCAAGAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVNNWGI*GSKSLH
Trigger: ATGAAGACTCTTGGAGCCTCAGATTCCCCAGTTGTT...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTACTCAGGAAAGTTAAGTaGATTGCTGGGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLLRKVK*IAGGGK
Trigger: TTTCCCACCCCCAGCAATTCACTTAACTTTCCTGAG...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTCAGCCGCCGCAGGTCTaGAAGGCCCTCACTCCGGCC +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFQPPQV*KALTPA
Trigger: GGCCGGAGTGAGGGCCTTGCAGACCTGCGGCGGCTG...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGTGGGATGAGGGGTCATaGAGTGTGGGAGTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLWDEGS*SVGVLY
Trigger: ATAGAGGACTCCCACACTGCATGACCCCTCATCCCA...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTCCTCTGGGTCCCGCATaGCTGCGAGCACAGCCCATG +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGPLGPA*LRAQPM
Trigger: CATGGGCTGTGCTCGCAGGCATGCGGGACCCAGAGG...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGTACCCTTCACCGGGCTaGCTCTGGGTCCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLYPSPG*LWVPHA
Trigger: GGCATGCGGGACCCAGAGGCAGCCCGGTGAAGGGTA...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGAGTCCTGGTGGATATaGGTTTGGGATGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLESWWI*VWDEGS
Trigger: TGACCCCTCATCCCAAACCCATATCCACCAGGACTC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACAGAAGGAACAGATACTaGGAGACAGCCACGGGACGC +
Preference number: 4 (lower is better)
Translates to: TFPFRGPTHSRADITFSHRRNRY*ETATGR
Trigger: GCGTCCCGTGGCTGTCTCCCAGTATCTGTTCCTTCT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACAAGGCCACCAAAGTTTaGCTCTTCTTTCCTAGAACC +
Preference number: 4 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNKATKV*LFFPRT
Trigger: GGTTCTAGGAAAGAAGAGCCAAACTTTGGTGGCCTT...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCCGGGCATCATTGGCTaGACATCTCCTTTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLPGIIG*TSPFLA
Trigger: TGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGATGGGGCCTGTCCCTaGCTGGCAAGGTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLDGACP*LARWVQ
Trigger: CTGCACCCACCTTGCCAGCCAGGGACAGGCCCCATC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAAATTCAGATCTGATGTaGAGTGGTGTTTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGNSDLM*SGVCLA
Trigger: GGCAAGGCAAACACCACTCCACATCAGATCTGAATT...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAAATTCAGATCTGATGTaGAGTGGTGTTTGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRENSDLM*SGVCLA
Trigger: GGCAAGGCAAACACCACTCCACATCAGATCTGAATT...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTATGCATTTTTGTGTCTaGCTGCTTCTGTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPMHFCV*LLLWNH
Trigger: ATGGTTCCACAGAAGCAGCCAGACACAAAAATGCAT...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGAATTTGGTCTGGAACTaGCAGATGGTCCCATCGCTG +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLNLVWN*QMVPSL
Trigger: CAGCGATGGGACCATCTGTCAGTTCCAGACCAAATT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGTGCCTTATCCCTGGGTaGATGGTAAAGCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLCLIPG*MVKPKP
Trigger: TGGTTTGGGCTTTACCATTCACCCAGGGATAAGGCA...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGCATGTGTCAGTGTCATaGAGCCAGAGCTCAAATTCA +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVHVSVS*SQSSNS
Trigger: TGAATTTGAGCTCTGGCTTCATGACACTGACACATG...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACACACTTGTGCACTGGTaGACACACATGCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: TFPFRGPTHSRADITFSHTLVHW*THMRSH
Trigger: GTGTGAGCGCATGTGTGTGCACCAGTGCACAAGTGT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGTCCAGTGGCTGGTCTTaGACATCCACTTCTAACACC +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLSSGWS*TSTSNT
Trigger: GGTGTTAGAAGTGGATGTGCAAGACCAGCCACTGGA...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAATCTGTCTTCTTCCTTaGAGTTTGGAGTCAGATTGC +
Preference number: 4 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGICLLP*SLESDC
Trigger: GCAATCTGACTCCAAACTGCAAGGAAGAAGACAGAT...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTCCCTGGAAGTGGAGGTaGCAGCCCGGCCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGPWKWR*QPGLKT
Trigger: GGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAGGG...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCTGCATGCGAAGTTCTaGTGTCCAGCAGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLLHAKF*CPADAE
Trigger: TTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATGGGCCTGTCCCTGGCTaGCAAGGTGGGTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYGPVPG*QGGCRD
Trigger: GTCCCTGCACCCACCTTGCCAGCCAGGGACAGGCCC...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTACCTCGGGGACAGTCTaGCTGAGGCTGGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGTSGTV*LRLELL
Trigger: GAGCAGCTCCAGCCTCAGCCAGACTGTCCCCGAGGT...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGATGCATTTTTGTGTCTaGCTGCTTCTGTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQMHFCV*LLLWNH
Trigger: ATGGTTCCACAGAAGCAGCCAGACACAAAAATGCAT...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGGGAAAGGGGGCAGCTaGCACAGCCCTCTGACTCTC +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLGKGGS*HSPLTL
Trigger: GAGAGTCAGAGGGCTGTGCCAGCTGCCCCCTTTCCC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTACACCTCCCGCCAACTaGGATAGGCAGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGTPPAN*DRQPPS
Trigger: TGAAGGGGGCTGCCTATCTCAGTTGGCGGGAGGTGT...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTACTTTCTCCATATTTaGTCTTGGCCAAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVYFLHI*SWPKGR
Trigger: TCGGCCTTTTGGCCAAGATCAAATATGGAGAAAGTA...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACTACTTTCTCCATATTTaGTCTTGGCCAAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHYFLHI*SWPKGR
Trigger: TCGGCCTTTTGGCCAAGATCAAATATGGAGAAAGTA...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAATATCCCAAAACAGAATaGACCTGCCCTCATATTAGA +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREYPKTE*TCPHIR
Trigger: TCTAATATGAGGGCAGGTTCATTCTGTTTTGGGATA...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTTTCCTGAGGCATGCCTaGGTGGCTGGGGCCTCACTT +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGFLRHA*VAGASL
Trigger: AAGTGAGGCCCCAGCCACTCAGGCATGCCTCAGGAA...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACCACATAATATGCACCTaGATGCAGTCGGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: TFPFRGPTHSRADITFSHHIICT*MQSGRG
Trigger: ACCTCGACCCGACTGCATTCAGGTGCATATTATGTG...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGGACATCTCCTTTCCTTaGAAGGAGGGAGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLDISFP*KEGVCL
Trigger: AAGGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTC...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGGAGTGAGTCCAGGCTaGACACAGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGGVSPG*TQLTAA
Trigger: GGCTGCAGTGAGCTGTGTGCAGCCTGGACTCACTCC...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGATTTTTGTGTCTGGCTaGTTCTGTGGAACCATAAAC +
Preference number: 4 (lower is better)
Translates to: PALILENTLTCGNPHTAQIFVSG*FCGTIN
Trigger: GTTTATGGTTCCACAGAAGCAGCCAGACACAAAAAT...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTGAGCTTGGTGCAGGCTaGCCTTGGCACTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFELGAG*PWHCQG
Trigger: CCCCTGGCAGTGCCAAGGGCAGCCTGCACCAAGCTC...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATGTGATGCCCTGGAAGTaGAGGTGCCAGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYVMPWK*RCQPGL
Trigger: GAGGCCGGGCTGGCACCTCCACTTCCAGGGCATCAC...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTCCTCCCGTGATGCCCTaGAAGTGGAGGTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFPPVMP*KWRCQP
Trigger: GGGCTGGCACCTCCACTTCCAGGGCATCACGGGAGG...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTGGCTGGGGCCTCACTTaGGACCTCGGGGACAGTCTG +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFGWGLT*DLGDSL
Trigger: CAGACTGTCCCCGAGGTCCCAAGTGAGGCCCCAGCC...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACCTGCGTAAAATCCGTTaGGGGTCTTCACAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: TFPFRGPTHSRADITFSHLRKIR*GSSQSL
Trigger: AAGAGACTGTGAAGACCCTCAACGGATTTTACGCAG...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTGGCCCACAGGAAATATaGGGCCCGTCACCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFGPQEI*GPSPSL
Trigger: GAGGGAGGGTGACGGGCCTCATATTTCCTGTGGGCC...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCCATGCACCCTCCCGTaGTGCCCTGGAAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYPCTLP*CPGSGG
Trigger: ACCTCCACTTCCAGGGCATCACGGGAGGGTGCATGG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACATATAAATCTACATCATaGGGCCATCGTATAACGAGG +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTYKSTS*GHRITR
Trigger: CCTCGTTATACGATGGCCTCATGATGTAGATTTATA...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGTCTCTTCAAAGAGCTaGCGCTCGATCCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLVSSKS*RSIRLS
Trigger: GGACAGCCGGATCGAGCGGCAGCTCTTTGAAGAGAC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTGGAGCCCACTGAACTaGGGCTCTCCAGGGGGATCC +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYWSPLN*GSPGGS
Trigger: GGATCCCCCTGGAGAGCCGCAGTTCAGTGGGCTCCA...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTCCCTGGAAGTGGAGGTaGCAGCCCGGCCTCAAAACC +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFPWKWR*QPGLKT
Trigger: GGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAGGG...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTGAGCTTCCTGAGGCATaGCTGAGTGGCTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFELPEA*LSGWGL
Trigger: GAGGCCCCAGCCACTCAGGCATGCCTCAGGAAGCTC...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAAGGGGAATCACATGGTaGATATGCATTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: KLDASRKAELASSSECRTRGITW*ICIFVS
Trigger: AGACACAAAAATGCATATGCACCATGTGATTCCCCT...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGCTCGCAAGGCCGAGCTaGCCTCTAGCTCTGAATGCA +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLLARPS*PLALNA
Trigger: TGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAG...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGCACAGAGCTTCACGCTaGGCAAGTTCTTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLHRASR*ASSFIG
Trigger: TCCAATAAAAGAACTTGCCCAGCGTGAAGCTCTGTG...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAATTAATTGATTACTTTTaGCCTCGCTTTCAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRELIDYF*PRFQSN
Trigger: GTTGGACTGAAAGCGAGGCCAAAAGTAATCAATTAA...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCAGACAGCAGGGTGCTaGCGCAGGGAGAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYQTAGC*RRERSM
Trigger: CATGCTCCTCTCCCTGCGCCAGCACCCTGCTGTCTG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAGTCTGGCTGCTTCTGTaGAACCATAAACTTCTTATT +
Preference number: 4 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLVWLLL*NHKLLI
Trigger: AATAAGAAGTTTATGGTTCCACAGAAGCAGCCAGAC...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGGTCTGGCTGCTTCTGTaGAACCATAAACTTCTTATT +
Preference number: 4 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVVWLLL*NHKLLI
Trigger: AATAAGAAGTTTATGGTTCCACAGAAGCAGCCAGAC...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGGTGAGCCCAAAGAATaGCTCAGAAGCGGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGGEPKE*LRSGCS
Trigger: AGAGCACCCGCTTCTGAGTCATTCTTTGGGCTCACC...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATGGCCCTGCAGGGGCATaGGAAGGAACAGATACTGGG +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYGPAGA*EGTDTG
Trigger: CCCAGTATCTGTTCCTTCTCATGCCCCTGCAGGGCC...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATACACCTCCCGCCAACTaGGATAGGCAGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYTPPAN*DRQPPS
Trigger: TGAAGGGGGCTGCCTATCTCAGTTGGCGGGAGGTGT...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGCGAAGACAGCAGGATaGAGAGAAGCAGTCGTTGGC +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGAKTAG*REAVVG
Trigger: GCCAACGACTGCTTCTCTGCATCCTGCTGTCTTCGC...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCCACAGAAAAGTCCCTaGGGGTGGCAGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYPQKSP*GWQWLP
Trigger: TGGCAGCCACTGCCACCCGCAGGGACTTTTCTGTGG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCCCGTTGTCTTGTCATaGGGAGCTGAGAGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYPVVLS*GAERGH
Trigger: GTGCCCCCTCTCAGCTCCCCATGACAAGACAACGGG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGAGAGCTACCTCCAGTaGCTGGTCTTGCACATCCAC +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLESYLQ*LVLHIH
Trigger: GTGGATGTGCAAGACCAGCCACTGGAGGTAGCTCTC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAATAAGCACCCAGATTTaGTTTTACCCGTTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREISTQI*FYPFSK
Trigger: TTTACTAAACGGGTAAAACCAAATCTGGGTGCTTAT...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACTTGCAGTTGTCTGTTTaGCATATGTGTTACATTTCC +
Preference number: 4 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHLQLSV*HMCYIS
Trigger: GGAAATGTAACACATATGCCAAACAGACAACTGCAA...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACAGGATCAGGCATTGGTaGTTTTTCATGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TFPFRGPTHSRADITFSHRIRHW*FFMLPV
Trigger: AACTGGAAGCATGAAAAATCACCAATGCCTGATCCT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTAGACAGAGTTCATCCTaGTCCCCATGTCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGRQSSS*SPCQVQ
Trigger: CTGGACCTGACATGGGGAGCAGGATGAACTCTGTCT...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTAGGGAGAGGAGCATGTaGAGCAGGAGCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFRERSM*SRSFLR
Trigger: CCTCAGGAAGCTCCTGCTGCACATGCTCCTCTCCCT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGAGGGGAATCACATGGTaGATATGCATTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLRGITW*ICIFVS
Trigger: AGACACAAAAATGCATATGCACCATGTGATTCCCCT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTAAGCAGTCGTTGGCCTaGCAGCCAAGGGGAACACAC +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFKQSLA*QPRGTH
Trigger: GTGTGTTCCCCTTGGCTGCCAGGCCAACGACTGCTT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGAAGCCGGGCATCATTaGCTGGACATCTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLEAGHH*LDISFP
Trigger: AGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGAAGCCGGGCATCATTaGCTGGACATCTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGEAGHH*LDISFP
Trigger: AGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTC...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGCCTGGGTTCCAAGCTTaGGCCCTGTTATCATCAACC +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLPGFQA*ALLSST
Trigger: GGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGG...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTTCCAGTGGCTGGTCTTaGACATCCACTTCTAACACC +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGSSGWS*TSTSNT
Trigger: GGTGTTAGAAGTGGATGTGCAAGACCAGCCACTGGA...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATAGAAGGAACAGATACTaGGAGACAGCCACGGGACGC +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYRRNRY*ETATGR
Trigger: GCGTCCCGTGGCTGTCTCCCAGTATCTGTTCCTTCT...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATGATTCAGGCCCCGCATaGCTATGTCTCTTCACGGAG +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYDSGPA*LCLFTE
Trigger: CTCCGTGAAGAGACATAGCCATGCGGGGCCTGAATC...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGAGTATCCCCTCATGTaGTCCTGGAGCATAGAACTG +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLEYPLM*SWSIEL
Trigger: CAGTTCTATGCTCCAGGACCACATGAGGGGATACTC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATCTGTTAAGCGGCCTCTaGGGCTGGATCTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYLLSGL*GWICLL
Trigger: AAGAAGACAGATCCAGCCTCAGAGGCCGCTTAACAG...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGGTTGCATACCCCTTTaGGAATCTGCTGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLGCIPL*ESAESC
Trigger: ACAGCTTTCAGCAGATTCTCAAAGGGGTATGCAACC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTCTCAGGAAAGTTAAGTaGATTGCTGGGGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGLRKVK*IAGGGK
Trigger: TTTCCCACCCCCAGCAATTCACTTAACTTTCCTGAG...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATAGCTTCCCATCTGGGTaGCATCCCTGTGGTAACAGA +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYSFPSG*HPCGNR
Trigger: TCTGTTACCACAGGGATGGCACCCAGATGGGAAGCT...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATGCTACCTCCAGTGGCTaGTCTTGCACATCCACTTCT +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYATSSG*SCTSTS
Trigger: AGAAGTGGATGTGCAAGACCAGCCACTGGAGGTAGC...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTCCTGGGTTCCAAGCTTaGGCCCTGTTATCATCAACC +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFPGFQA*ALLSST
Trigger: GGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGG...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTTGCCCCACACCTCTaGAAGCCACAGAAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYFAPHL*KPQKSP
Trigger: GGGACTTTTCTGTGGCTTCCAGAGGTGTGGGGCAAA...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp CTGGATCTGTCTTCTTCCTTGCAGTTTGGAGTCAGATaGCCTAGATTCAAAGCCAAGATCTGCAATTTCCCA +
Preference number: 4 (lower is better)
Translates to: LDLSSSLQFGVR*PRFKAKICNFP
Trigger: TGGGAAATTGCAGATCTTGGCTTTGAATCTAGGCAATCTGACTCCAAACTGCAAGGAAGAAGACAGATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp GGTAATCTTGATCCTGACTCCCAATCAAAGGCGAGTTaGGCCTGTCTTTCAGTTTCATATAAGGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: GNLDPDSQSKAS*ACLSVSYKGNH
Trigger: GTGATTCCCCTTATATGAAACTGAAAGACAGGCCAAACTCGCCTTTGATTGGGAGTCAGGATCAAGATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTTGCCTTATCCCTGGGTaGATGGTAAAGCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFCLIPG*MVKPKP
Trigger: TGGTTTGGGCTTTACCATTCACCCAGGGATAAGGCA...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATAGTCTCAAAGTTGGATaGTTCTCGCAAGGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYSLKVG*FSQGRA
Trigger: AGCTCGGCCTTGCGAGAAGCATCCAACTTTGAGACT...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTTCTGGAACTGACAGATaGTCCCATCGCTGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFSGTDR*SHRCSL
Trigger: GAGACTACAGCGATGGGACCATCTGTCAGTTCCAGA...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTGGTGGATATGGGTTTaGGATGAGGGGTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYWWIWV*DEGSCS
Trigger: ACTGCATGACCCCTCATCCCAAACCCATATCCACCA...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGTTTGGATTCAAATCTaGCCTCGGGGTAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLVWIQI*PRGRTN
Trigger: GTTTGTTCTACCCCGAGGCCAGATTTGAATCCAAAC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACATAAGCACCCAGATTTaGTTTTACCCGTTTAGTAAA +
Preference number: 4 (lower is better)
Translates to: TFPFRGPTHSRADITFSHISTQI*FYPFSK
Trigger: TTTACTAAACGGGTAAAACCAAATCTGGGTGCTTAT...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTGCTCAAATTCAGATCTaGTGTGGAGTGGTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFAQIQI*CGVVFA
Trigger: GGCAAACACCACTCCACATCAGATCTGAATTTGAGC...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTTCATGCTTCCAGTTaGCATCCATTGCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYFHASS*HPLPPR
Trigger: CCTTGGTGGCAATGGATGTCAACTGGAAGCATGAAA...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTAGGATCAGGCATTGGTaGTTTTTCATGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGRIRHW*FFMLPV
Trigger: AACTGGAAGCATGAAAAATCACCAATGCCTGATCCT...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTAACTCTTTAAAATCCTaGTGCCCAAGCTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFNSLKS*CPSCPP
Trigger: TGGGGGACAGCTTGGGCATCAGGATTTTAAAGAGTT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTCAAGGGAAAGAGTCCTaGTGGATATGGGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFQGKES*WIWVWD
Trigger: ATCCCAAACCCATATCCACCAGGACTCTTTCCCTTG...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTGAGGTTAAGAACTCCTaGTGTGAACCTGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFEVKNS*CEPGLF
Trigger: AAACAGCCCAGGTTCACACCAGGAGTTCTTAACCTC...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp TTCACACACACACACACACACACACGTAACATAGAGTaGCAGTTGTCTGTTTGGCATATGTGTTACATTTCC +
Preference number: 4 (lower is better)
Translates to: FTHTHTHTRNIE*QLSVWHMCYIS
Trigger: GGAAATGTAACACATATGCCAAACAGACAACTGCAACTCTATGTTACGTGTGTGTGTGTGTGTGTGTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGTATAAATCTACATCATaGGGCCATCGTATAACGAGG +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLYKSTS*GHRITR
Trigger: CCTCGTTATACGATGGCCTCATGATGTAGATTTATA...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTAATCTTCTCAGCCTCTaGGTAAAATCCGTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFNLLSL*VKSVEG
Trigger: ACCCTCAACGGATTTTACGCAGAGGCTGAGAAGATT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR GCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTATTTTTGTGTCTGGCTaGTTCTGTGGAACCATAAAC +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGIFVSG*FCGTIN
Trigger: GTTTATGGTTCCACAGAAGCAGCCAGACACAAAAAT...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CCA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATACCTTTGAAGGTCCATaGAAACCTCACCTACAAAGC +
Preference number: 4 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYTFEGP*KPHLQS
Trigger: GCTTTGTAGGTGAGGTTTCCATGGACCTTCAAAGGT...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGGTTGCTGTGAGAATTaGATGACTAATTATGTAGAG +
Preference number: 4 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLGCCEN*MTNYVE
Trigger: CTCTACATAATTAGTCATTCAATTCTCACAGCAACC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTGGTTGCTGTGAGAATTaGATGACTAATTATGTAGAG +
Preference number: 4 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGGCCEN*MTNYVE
Trigger: CTCTACATAATTAGTCATTCAATTCTCACAGCAACC...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR TCA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTTGGCCAGTTTCTTACTaGCTCCTCAAAACCAATTGT +
Preference number: 4 (lower is better)
Translates to: NSRHNSARFQHPATFSIFWPVSY*LLKTNC
Trigger: ACAATTGGTTTTGAGGAGTCAGTAAGAAACTGGCCA...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
3UTR CAA 72 bp AATGTTCCTGGCATTTATTCGGGAATCAGTGAACCCTaGGATAAATATCTGTTTATTCTATGCCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: NVPGIYSGISEP*DKYLFILCQNL
Trigger: CAGATTCTGGCATAGAATAAACAGATATTTATCCAAGGGTTCACTGATTCCCGAATAAATGCCAGGAACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS GCA 90 bp GCGCCCGAGGCTCCTCACGGCCCGATCGCCCGCTGCCGCGGCTCCTaGAGGCAACGGCCGGGTTTAGCTTTGGCGGCGGCGGCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: APEAPHGPIARCRGS*RQRPGLALAAAAAG
Trigger: CCCCGCCGCCGCCGCCGCCAAAGCTAAACCCGGCCGTTGCCTGCAGGAGCCGCGGCAGCGGGCGATCGGGCCGTGAGGAGCCTCGGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS GCA 90 bp GGAGGCGAGGCCGCGCCCGAGGCTCCTCACGGCCCGATCGCCCGCTaGCGCGGCTCCTGCAGGCAACGGCCGGGTTTAGCTTTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: GGEAAPEAPHGPIAR*RGSCRQRPGLALAA
Trigger: CGCCGCCAAAGCTAAACCCGGCCGTTGCCTGCAGGAGCCGCGGCAGCGGGCGATCGGGCCGTGAGGAGCCTCGGGCGCGGCCTCGCCTCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS GCA 90 bp CCGCCCCACCACCCCCACCGCTGCTGCTGCCACTGCCGCTGCTGCTaGCGCTGCTGGAGCTGCCACTGCTGCACCGGTCCTCGTAGATGG +
Preference number: 5 (lower is better)
Translates to: PPHHPHRCCCHCRCC*RCWSCHCCTGPRRW
Trigger: CCATCTACGAGGACCGGTGCAGCAGTGGCAGCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCAGCAGCAGCGGTGGGGGTGGTGGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACTGGCTGGGGCCTCACTaGGGACCTCGGGGACAGTCT +
Preference number: 5 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHWLGPH*GPRGQS
Trigger: AGACTGTCCCCGAGGTCCCAAGTGAGGCCCCAGCCA...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS GCA 90 bp CACCACCCCCACCGCTGCTGCTGCCACTGCCGCTGCTGCTGCCGCTaGTGGAGCTGCCACTGCTGCACCGGTCCTCGTAGATGGAGATCT +
Preference number: 5 (lower is better)
Translates to: HHPHRCCCHCRCCCR*WSCHCCTGPRRWRS
Trigger: AGATCTCCATCTACGAGGACCGGTGCAGCAGTGGCAGCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCAGCAGCAGCGGTGGGGGTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AGTCCCTGCGGGTGGCAGTGGCTGCCAACCGGGGAGCCGTGGGGGACGTGTCACGGAAGAGTTGTGAGCTaGGTGCAGGCTGCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: SPCGWQWLPTGEPWGTCHGRVVS*VQAALG
Trigger: GCCAAGGGCAGCCTGCACCAAGCTCACAACTCTTCC...GTGACACGTCCCCCACGGCTCCCCGGTTGGCAGCCACTGCCACCCGCAGGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS CCA 90 bp CACCCCCACCGCTGCTGCTGCCACTGCCGCTGCTGCTGCCGCTGCTaGAGCTGCCACTGCTGCACCGGTCCTCGTAGATGGAGATCTCAA +
Preference number: 5 (lower is better)
Translates to: HPHRCCCHCRCCCRC*SCHCCTGPRRWRSQ
Trigger: TTGAGATCTCCATCTACGAGGACCGGTGCAGCAGTGGCAGCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCAGCAGCAGCGGTGGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTAGCTGCTCCTGGGTCTaGATGGGGCCTGTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPSCSWV*MGPVPG
Trigger: GCCAGGGACAGGCCCCATCAAGACCCAGGAGCAGCT...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAAGCTGCTCCTGGGTCTaGATGGGGCCTGTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGSCSWV*MGPVPG
Trigger: GCCAGGGACAGGCCCCATCAAGACCCAGGAGCAGCT...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTGCAGAGAAGCAGTCGTaGGCCTGGCAGCCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPAEKQS*AWQPRG
Trigger: TCCCCTTGGCTGCCAGGCCAACGACTGCTTCTCTGC...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGATGGACCAGGACTCACTaGGGCCGAGGACTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGWTRTH*GRGLPE
Trigger: CTCAGGAAGTCCTCGGCCCAAGTGAGTCCTGGTCCA...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGGAAGAGTTGTGAGCTaGGTGCAGGCTGCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGGRVVS*VQAALG
Trigger: GCCAAGGGCAGCCTGCACCAAGCTCACAACTCTTCC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS TCA 90 bp GGTCCCATCGCTGTAGTCTCTCTGGATAAAGACCTTGGTGGCCAGTaGGGCACTTCGCCGGAGCTCCTGCAGATTGTGGACCTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: GPIAVVSLDKDLGGQ*GTSPELLQIVDLGG
Trigger: GCCACCGAGGTCCACAATCTGCAGGAGCTCCGGCGAAGTGCCTCACTGGCCACCAAGGTCTTTATCCAGAGAGACTACAGCGATGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS-3UTR CAA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACCGGAGCTCCTGCAGATaGTGGACCTCGGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNRSSCR*WTSVAM
Trigger: CATGGCCACCGAGGTCCACAATCTGCAGGAGCTCCG...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS-3UTR CAA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACATGGCTGGGGCCTCACTaGGGACCTCGGGGACAGTCT +
Preference number: 5 (lower is better)
Translates to: KLDASRKAELASSSECRTWLGPH*GPRGQS
Trigger: AGACTGTCCCCGAGGTCCCAAGTGAGGCCCCAGCCA...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACGTGTCTGCAGCCCCGTaGTCTTGTCATGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNVSAAP*SCHGEL
Trigger: CAGCTCCCCATGACAAGACAACGGGGCTGCAGACAC...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAAGGCTGCTGGCACCTTaGAAGGTCCATGGAAACCTC +
Preference number: 5 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGRLLAP*KVHGNL
Trigger: GAGGTTTCCATGGACCTTCAAAGGTGCCAGCAGCCT...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGTGGACCAGGACTCACTaGGGCCGAGGACTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: PALILENTLTCGNPHTAQWTRTH*GRGLPE
Trigger: CTCAGGAAGTCCTCGGCCCAAGTGAGTCCTGGTCCA...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACTCTCCAGGGGGATCCTaGGACCAGGACTCACTTGGG +
Preference number: 5 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNSPGGS*DQDSLG
Trigger: CCCAAGTGAGTCCTGGTCCAAGGATCCCCCTGGAGA...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGATGTGGAGTGGTGTTaGCCTTGCCTTATCCCTGGG +
Preference number: 5 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGDVEWC*PCLIPG
Trigger: CCCAGGGATAAGGCAAGGCAAACACCACTCCACATC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS TCA 90 bp GGTCCCATCGCTGTAGTCTCTCTGGATAAAGACCTTGGTGGCCAGTaGGGCACTTCGCCGGAGCTCCTGCAGATTGTGGACCTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GPIAVVSLDKDLGGQ*GTSPELLQIVDLRR
Trigger: TCTCCTCAGGTCCACAATCTGCAGGAGCTCCGGCGAAGTGCCTCACTGGCCACCAAGGTCTTTATCCAGAGAGACTACAGCGATGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596005.2
CDS-3UTR CAA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGGTGTCTGCAGCCCCGTaGTCTTGTCATGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVVSAAP*SCHGEL
Trigger: CAGCTCCCCATGACAAGACAACGGGGCTGCAGACAC...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGAAGAGGCTGGAGCCGTaGTCCCCACAGTCTGATGAG +
Preference number: 5 (lower is better)
Translates to: PALILENTLTCGNPHTAQKRLEP*SPQSDE
Trigger: CTCATCAGACTGTGGGGACAACGGCTCCAGCCTCTT...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAAGAGAACACGCTCACTaGTGGCAACCCACACACGGC +
Preference number: 5 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGREHAH*WQPTHG
Trigger: GCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCT...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CTGGAAGTGGAGGTGCCAGCCCGGCCTCAAAACCCAGGCATGGCTCCAAGTCCTCGACCCAGGGTAATCTaGATCCTGACTCCCAATCAA +
Preference number: 5 (lower is better)
Translates to: LEVEVPARPQNPGMAPSPRPRVI*ILTPNQ
Trigger: TTGATTGGGAGTCAGGATCAAGATTACCCTGGGTCG...AGGACTTGGAGCCATGCCTGGGTTTTGAGGCCGGGCTGGCACCTCCACTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGCCGTCTCCCCACACCTaGAATTTGGTGGAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVPSPHT*NLVEAG
Trigger: TCCTGCCTCCACCAAATTCAAGGTGTGGGGAGACGG...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACATTGCAAGGAGGGAGTTaGCCTTTCCCCTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: KLDASRKAELASSSECRTLQGGS*PFPCRL
Trigger: CAGCCTGCAGGGGAAAGGCAAACTCCCTCCTTGCAA...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AGGGACAGGGGGCATAGGTTGATGGCCCACAGGAAATATGAGGCCCGTCACCCTGGACATCTCCTTTCCTaGCAAGGAGGGAGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: RDRGHRLMAHRKYEARHPGHLLS*QGGSLP
Trigger: AGGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTCC...AGGGTGACGGGCCTCATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAAAGAGGCTGGAGCCGTaGTCCCCACAGTCTGATGAG +
Preference number: 5 (lower is better)
Translates to: KLDASRKAELASSSECRTKRLEP*SPQSDE
Trigger: CTCATCAGACTGTGGGGACAACGGCTCCAGCCTCTT...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAGATGTGGAGTGGTGTTaGCCTTGCCTTATCCCTGGG +
Preference number: 5 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREDVEWC*PCLIPG
Trigger: CCCAGGGATAAGGCAAGGCAAACACCACTCCACATC...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGACGACCCAGGGTAATCTaGATCCTGACTCCCAATCAA +
Preference number: 5 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGRPRVI*ILTPNQ
Trigger: TTGATTGGGAGTCAGGATCAAGATTACCCTGGGTCG...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGATTCCCACTTCCTCCATaGTCCCTGATTCAAAACCCG +
Preference number: 5 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGFPLPP*SLIQNP
Trigger: CGGGTTTTGAATCAGGGACAATGGAGGAAGTGGGAA...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS GCA 90 bp CAGGCAGCCCTCGAGGTAGGAGCTGCCCCCAATCTTCTCAGCCTCTaGGTAAAATCCGTTGAGGGTCTTCACAGTCTCTTCAAAGAGCTG +
Preference number: 5 (lower is better)
Translates to: QAALEVGAAPNLLSL*VKSVEGLHSLFKEL
Trigger: CAGCTCTTTGAAGAGACTGTGAAGACCCTCAACGGATTTTACGCAGAGGCTGAGAAGATTGGGGGCAGCTCCTACCTCGAGGGCTGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAAGGCTGCTGGCACCTTaGAAGGTCCATGGAAACCTC +
Preference number: 5 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLRLLAP*KVHGNL
Trigger: GAGGTTTCCATGGACCTTCAAAGGTGCCAGCAGCCT...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGGACATCTCCTTTCCTaGCAAGGAGGGAGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PALILENTLTCGNPHTAQGHLLS*QGGSLP
Trigger: AGGCAAACTCCCTCCTTGCAAGGAAAGGAGATGTCC...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAAGAAGCCGGGCATCATaGGCTGGACATCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLRSRAS*AGHLLS
Trigger: GGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCT...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAATTTCTGTCTCCACCTTaGATTCCCCGAGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: PHVVLEHRTDPPSSRGREFLSPP*IPRVQC
Trigger: GCACTGCACTCGGGGAATCAAAGGTGGAGACAGAAA...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGGTTCCAGCAGAGGGAGGTGCATATGCATTTTaGTGTCTGGCTGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: ENTLTCGNPHTAQVPAEGGAYAF*CLAASV
Trigger: CACAGAAGCAGCCAGACACAAAAATGCATATGCACC...TCCCTCTGCTGGAACCTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGGACAGGGGGCATAGGTaGATGGCCCACAGGAAATAT +
Preference number: 5 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVDRGHR*MAHRKY
Trigger: ATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTC...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAAGGGGCAAGGGGCTTTaGGACATTTACTTACAGGGG +
Preference number: 5 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLRGKGL*DIYLQG
Trigger: CCCCTGTAAGTAAATGTCCAAAAGCCCCTTGCCCCT...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAAGGGGCAAGGGGCTTTaGGACATTTACTTACAGGGG +
Preference number: 5 (lower is better)
Translates to: KLDASRKAELASSSECRTRGKGL*DIYLQG
Trigger: CCCCTGTAAGTAAATGTCCAAAAGCCCCTTGCCCCT...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GAGACCTGGGTTCCAAGCTTGGGCCCTGTTATCATCAACCAGCTGTGTGGCCTAAAAGCAGGCCTCTCTTaGACTCCAGAGAGCTACCTC +
Preference number: 5 (lower is better)
Translates to: ETWVPSLGPVIINQLCGLKAGLS*TPESYL
Trigger: GAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT...TAGGCCACACAGCTGGTTGATGATAACAGGGCCCAAGCTTGGAACCCAGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACTCTCCAGGGGGATCCTaGGACCAGGACTCACTTGGG +
Preference number: 5 (lower is better)
Translates to: TFPFRGPTHSRADITFSHSPGGS*DQDSLG
Trigger: CCCAAGTGAGTCCTGGTCCAAGGATCCCCCTGGAGA...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGAGAAGCCGGGCATCATaGGCTGGACATCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLRSRAS*AGHLLS
Trigger: GGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCT...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGACTTCTTCCTTGCAGTTaGGAGTCAGATTGCCTAGAT +
Preference number: 5 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGLLPCS*ESDCLD
Trigger: ATCTAGGCAATCTGACTCCAAACTGCAAGGAAGAAG...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GGGAGTTTGCCTTTCCCCTGCAGGCTGCTGGCACCTTTGAAGGTCCATGGAAACGATCTGTCTTCTTCCTaGCAGTTTGGAGTCAGATTG +
Preference number: 5 (lower is better)
Translates to: GSLPFPCRLLAPLKVHGNDLSSS*QFGVRL
Trigger: CAATCTGACTCCAAACTGCAAGGAAGAAGACAGATC...GTTTCCATGGACCTTCAAAGGTGCCAGCAGCCTGCAGGGGAAAGGCAAACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp GCCTCAGAAGCCGGGCATCATTGGCTGGACATCTCCTTTCCTTGCAAGGAGGGAGATCTGTCTTCTTCCTaGCAGTTTGGAGTCAGATTG +
Preference number: 5 (lower is better)
Translates to: ASEAGHHWLDISFPCKEGDLSSS*QFGVRL
Trigger: CAATCTGACTCCAAACTGCAAGGAAGAAGACAGATC...TCCCTCCTTGCAAGGAAAGGAGATGTCCAGCCAATGATGCCCGGCTTCTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AAGTTGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCTCTGAATGCAGGACAGGTGCATATGCATTTTaGTGTCTGGCTGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: KLDASRKAELASSSECRTGAYAF*CLAASV
Trigger: CACAGAAGCAGCCAGACACAAAAATGCATATGCACC...TGTCCTGCATTCAGAGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACGAAATGACAGGCCCTTaGAACATCCTCTTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHEMTGP*NILLEE
Trigger: TTCCTCCAAGAGGATGTTCAAAGGGCCTGTCATTTC...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp ATCCTGCATGCGAAGTTCTGCTGTCCAGCAGATGCTGAAATGACAGGCCCTTTGTGCAAAGTCTCAAAGTaGGATGCTTCTCGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: ILHAKFCCPADAEMTGPLCKVSK*DASRKA
Trigger: GGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGCA...CAAAGGGCCTGTCATTTCAGCATCTGCTGGACAGCAGAACTTCGCATGCAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGCAGAGAAGCAGTCGTaGGCCTGGCAGCCAAGGGGA +
Preference number: 5 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLAEKQS*AWQPRG
Trigger: TCCCCTTGGCTGCCAGGCCAACGACTGCTTCTCTGC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACTTTCTGTCTCCACCTTaGATTCCCCGAGTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: TFPFRGPTHSRADITFSHFLSPP*IPRVQC
Trigger: GCACTGCACTCGGGGAATCAAAGGTGGAGACAGAAA...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp ACCTTCCCTTTTAGAGGGCCCACCCACAGCAGAGCAGACATTACATTTTCACACGGAGTGGTGTTTGCCTaGCCTTATCCCTGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: TFPFRGPTHSRADITFSHGVVFA*PYPWVN
Trigger: ATTCACCCAGGGATAAGGCAAGGCAAACACCACTCC...GTGTGAAAATGTAATGTCTGCTCTGCTGTGGGTGGGCCCTCTAAAAGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCTGCCCTCATATTAGAGAACACGCTCACTTGTGGCAACCCACACACGGCCCAGACACGTAACATAGAGTaGCAGTTGTCTGTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: PALILENTLTCGNPHTAQTRNIE*QLSVWH
Trigger: ATGCCAAACAGACAACTGCAACTCTATGTTACGTGT...CTGGGCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCTAATATGAGGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGTGCAGCCCCGTTGTCTaGTCATGGGGAGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLCSPVV*SWGAER
Trigger: CCTCTCAGCTCCCCATGACAAGACAACGGGGCTGCA...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCCAAGGGAAAGAGTCCTGGTGGATATGGGTTTGGGATGAGGGGTCATGCAGTGTTGAAAATGGAAGGGTaGAATGCCTCTCAGTCAGAT +
Preference number: 5 (lower is better)
Translates to: PKGKSPGGYGFGMRGHAVLKMEG*NASQSD
Trigger: ATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAA...CACTGCATGACCCCTCATCCCAAACCCATATCCACCAGGACTCTTTCCCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACTTGAAAATGGAAGGGTaGAATGCCTCTCAGTCAGAT +
Preference number: 5 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHLKMEG*NASQSD
Trigger: ATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAA...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGTTGCAAGGAGGGAGTTaGCCTTTCCCCTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLLQGGS*PFPCRL
Trigger: CAGCCTGCAGGGGAAAGGCAAACTCCCTCCTTGCAA...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CCTCATGTGGTCCTGGAGCATAGAACTGACCCTCCATCGTCACGGGGCAGAGAAACTCCTCAAAACCAATaGTTCTTAACCTTTTTAGGG +
Preference number: 5 (lower is better)
Translates to: PHVVLEHRTDPPSSRGRETPQNQ*FLTFLG
Trigger: CCCTAAAAAGGTTAAGAACAATTGGTTTTGAGGAGT...TTCTCTGCCCCGTGACGATGGAGGGTCAGTTCTATGCTCCAGGACCACATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AAAGCAGGCCTCTCTTTGACTCCAGAGAGCTACCTCCAGTGGCTGGTCTTGCACACTCCTCAAAACCAATaGTTCTTAACCTTTTTAGGG +
Preference number: 5 (lower is better)
Translates to: KAGLSLTPESYLQWLVLHTPQNQ*FLTFLG
Trigger: CCCTAAAAAGGTTAAGAACAATTGGTTTTGAGGAGT...GTGCAAGACCAGCCACTGGAGGTAGCTCTCTGGAGTCAAAGAGAGGCCTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTAGAGAACACGCTCACTaGTGGCAACCCACACACGGC +
Preference number: 5 (lower is better)
Translates to: NSRHNSARFQHPATFSIFREHAH*WQPTHG
Trigger: GCCGTGTGTGGGTTGCCACAAGTGAGCGTGTTCTCT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CTGTCCCCCAAAACAATTAAATCAGAATCTCTGAGGATAGGATCAGGCATTGGTTTCCCACTTCCTCCATaGTCCCTGATTCAAAACCCG +
Preference number: 5 (lower is better)
Translates to: LSPKTIKSESLRIGSGIGFPLPP*SLIQNP
Trigger: CGGGTTTTGAATCAGGGACAATGGAGGAAGTGGGAA...ACCAATGCCTGATCCTATCCTCAGAGATTCTGATTTAATTGTTTTGGGGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATGACAGGGGGCATAGGTaGATGGCCCACAGGAAATAT +
Preference number: 5 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYDRGHR*MAHRKY
Trigger: ATATTTCCTGTGGGCCATCAACCTATGCCCCCTGTC...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AAAATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATGGAGTGGTGTTTGCCTaGCCTTATCCCTGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: KIQDTTLLGSNIQLLSPYGVVFA*PYPWVN
Trigger: ATTCACCCAGGGATAAGGCAAGGCAAACACCACTCC...ATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp CATTTGAAAATGGAAGGGTTGAATGCCTCTCAGTCAGATAAGCACCCAGATTTGGAAATGACAGGCCCTTaGAACATCCTCTTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: HLKMEGLNASQSDKHPDLEMTGP*NILLEE
Trigger: TTCCTCCAAGAGGATGTTCAAAGGGCCTGTCATTTC...CAAATCTGGGTGCTTATCTGACTGAGAGGCATTCAACCCTTCCATTTTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS-3UTR CAA 90 bp AATTCAAGACACAACTCTGCTAGGTTCCAACATCCAGCTACTTTCTCCATATTTACACGTAACATAGAGTaGCAGTTGTCTGTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: NSRHNSARFQHPATFSIFTRNIE*QLSVWH
Trigger: ATGCCAAACAGACAACTGCAACTCTATGTTACGTGT...AAATATGGAGAAAGTAGCTGGATGTTGGAACCTAGCAGAGTTGTGTCTTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS CAA 72 bp TGCCGCGGCTCCTGCAGGCAACGGCCGGGTTTAGCTTaGGCGGCGGCGGCGGCGGGGATGGGGGCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: CRGSCRQRPGLA*AAAAAGMGAAG
Trigger: CCCGGCCGCCCCCATCCCCGCCGCCGCCGCCGCCAAAGCTAAACCCGGCCGTTGCCTGCAGGAGCCGCGGCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS GCA 72 bp GCCGCGCCCGAGGCTCCTCACGGCCCGATCGCCCGCTaGCGCGGCTCCTGCAGGCAACGGCCGGGTTTAGCT +
Preference number: 6 (lower is better)
Translates to: AAPEAPHGPIAR*RGSCRQRPGLA
Trigger: AGCTAAACCCGGCCGTTGCCTGCAGGAGCCGCGGCAGCGGGCGATCGGGCCGTGAGGAGCCTCGGGCGCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS GCA 72 bp GCTCCTCACGGCCCGATCGCCCGCTGCCGCGGCTCCTaGAGGCAACGGCCGGGTTTAGCTTTGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: APHGPIARCRGS*RQRPGLALAAA
Trigger: CGCCGCCGCCAAAGCTAAACCCGGCCGTTGCCTGCAGGAGCCGCGGCAGCGGGCGATCGGGCCGTGAGGAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS GCA 72 bp CCCCACCACCCCCACCGCTGCTGCTGCCACTGCCGCTaGTGCTGCCGCTGCTGGAGCTGCCACTGCTGCACC +
Preference number: 6 (lower is better)
Translates to: PHHPHRCCCHCR*CCRCWSCHCCT
Trigger: GGTGCAGCAGTGGCAGCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCAGCAGCAGCGGTGGGGGTGGTGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS GCA 72 bp CACCACCCCCACCGCTGCTGCTGCCACTGCCGCTGCTaGTGCCGCTGCTGGAGCTGCCACTGCTGCACCGGT +
Preference number: 6 (lower is better)
Translates to: HHPHRCCCHCRC*CRCWSCHCCTG
Trigger: ACCGGTGCAGCAGTGGCAGCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCAGCAGCAGCGGTGGGGGTGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS GCA 72 bp ACCTTGGTGGCCAGTGAGGCACTTCGCCGGAGCTCCTaGAGATTGTGGACCTCGGTGGCCATGATCCGGGGG +
Preference number: 6 (lower is better)
Translates to: TLVASEALRRSS*RLWTSVAMIRG
Trigger: CCCCCGGATCATGGCCACCGAGGTCCACAATCTGCAGGAGCTCCGGCGAAGTGCCTCACTGGCCACCAAGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370602.6
CDS GCA 72 bp TGCTGCCACTGCCGCTGCTGCTGCCGCTGCTGGAGCTaGCACTGCTGCACCGGTCCTCGTAGATGGAGATCT +
Preference number: 6 (lower is better)
Translates to: CCHCRCCCRCWS*HCCTGPRRWRS
Trigger: AGATCTCCATCTACGAGGACCGGTGCAGCAGTGGCAGCTCCAGCAGCGGCAGCAGCAGCGGCAGTGGCAGCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS GCA 72 bp CCGTGGCGCAGGCCAGGCAGCCCTCGAGGTAGGAGCTaGCCCCAATCTTCTCAGCCTCTGCGTAAAATCCGT +
Preference number: 6 (lower is better)
Translates to: PWRRPGSPRGRS*PQSSQPLRKIR
Trigger: ACGGATTTTACGCAGAGGCTGAGAAGATTGGGGGCAGCTCCTACCTCGAGGGCTGCCTGGCCTGCGCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS CAA 72 bp GAAGGCTGGGCTCTGGCAGCCTGCAAAGTCTCAAAGTaGGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGC +
Preference number: 6 (lower is better)
Translates to: EGWALAACKVSK*DASRKAELASS
Trigger: GCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGCAGGCTGCCAGAGCCCAGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423054.1
CDS CCA 72 bp AAGGCTGGGCTCTGGCAGCCTGCAAAGTCTCAAAGTTaGATGCTTCTCGCAAGGCCGAGCTGGCCTCTAGCT +
Preference number: 6 (lower is better)
Translates to: KAGLWQPAKSQS*MLLARPSWPLA
Trigger: AGCTAGAGGCCAGCTCGGCCTTGCGAGAAGCATCCAACTTTGAGACTTTGCAGGCTGCCAGAGCCCAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423054.1
CDS TCA 72 bp GCTGTAGTCTCTCTGGATAAAGACCTTGGTGGCCAGTaGGGCACTTCGCCGGAGCTCCTGCAGATTGTGGAC +
Preference number: 6 (lower is better)
Translates to: AVVSLDKDLGGQ*GTSPELLQIVD
Trigger: GTCCACAATCTGCAGGAGCTCCGGCGAAGTGCCTCACTGGCCACCAAGGTCTTTATCCAGAGAGACTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2
CDS GCA 72 bp CTCGAGGTAGGAGCTGCCCCCAATCTTCTCAGCCTCTaGGTAAAATCCGTTGAGGGTCTTCACAGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LEVGAAPNLLSL*VKSVEGLHSLF
Trigger: GAAGAGACTGTGAAGACCCTCAACGGATTTTACGCAGAGGCTGAGAAGATTGGGGGCAGCTCCTACCTCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370602.6
ENST00000596005.2