Pregenerated sensors for GOLGA7 (Homo sapiens)
Ensembl gene IDs: ENSG00000147533Ensembl transcript IDs: ENST00000357743.9, ENST00000405786.2, ENST00000518270.5, ENST00000520817.5
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACACGGCCAGTGGATACATaGGGGGCCCGGCTGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTRPVDT*GARLEV Trigger: CACTTCCAGCCGGGCCCCTCATGTATCCACTGGCCG...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| 3UTR-3UTR GCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAGAGGTAGGGACACTCTaGGGTCGGCCAGTGGATACA | + |
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Preference number: 2 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTEVGTL*GRPVDT Trigger: TGTATCCACTGGCCGACCGCAGAGTGTCCCTACCTC...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| 3UTR-3UTR TCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAACACAAAGTGGATGCTaGGCGACTAGAGGTCACTCC | + |
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Preference number: 2 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTTQSGC*ATRGHS Trigger: GGAGTGACCTCTAGTCGCTCAGCATCCACTTTGTGT...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| 3UTR-3UTR TCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAGAAGATACGGCTTGTTaGGGTCTAAAGCCACCTGAG | + |
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Preference number: 2 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTEDTAC*GLKPPE Trigger: CTCAGGTGGCTTTAGACCTCAACAAGCCGTATCTTC...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| 3UTR-3UTR GCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACATTGAAATCTGGGAGGTaGAAAACGACAGCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTLKSGR*KTTATA Trigger: GGCTGTGGCTGTCGTTTTGCACCTCCCAGATTTCAA...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| 3UTR-3UTR TCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAAAGATAGAACACTGGTaGAGATACGGCTTGTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTKIEHW*RYGLLR Trigger: CCTCAACAAGCCGTATCTTCACCAGTGTTCTATCTT...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| 3UTR-3UTR CCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAAATGGTATGTACTGGTaGCAGATAACAAGCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTNGMYW*QITSFA Trigger: TGCAAAGCTTGTTATCTGCCACCAGTACATACCATT...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| 3UTR-3UTR TCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAAAACCAGTAATTCTTTaGAATCTGGGAGGTGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTKPVIL*NLGGAK Trigger: TTTTGCACCTCCCAGATTTCAAAGAATTACTGGTTT...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| CDS-3UTR TCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACACTGGACCCGGGACTCTaGCCCGCCAGCCCCTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTLDPGL*PASPSP Trigger: GGGCGAGGGGCTGGCGGGTCAGAGTCCCGGGTCCAG...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357743.9 |
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| CDS-3UTR GCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACACCGGACACCGGCGCCTaGTGCGGCCTCATGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTPDTGA*CGLMAR Trigger: CCTCGCCATGAGGCCGCAGCAGGCGCCGGTGTCCGG...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| CDS-3UTR CCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAGTCAGAGCCCCGGCCTaGACCCGGGACTCTGACCCG | + |
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Preference number: 4 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTVRAPA*TRDSDP Trigger: CGGGTCAGAGTCCCGGGTCCAGGCCGGGGCTCTGAC...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357743.9 |
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| CDS-3UTR GCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAGACACCGGCGCCTGCTaGGGCCTCATGGCGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTDTGAC*GLMART Trigger: TGTCCTCGCCATGAGGCCGCAGCAGGCGCCGGTGTC...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| CDS-3UTR CCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACACTCCTACCTCAGGTCTaGGACCCACCCTCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTLLPQV*DPPSPP Trigger: CGGAGGAGAGGGTGGGTCCCAGACCTGAGGTAGGAG...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520817.5 |
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| CDS-3UTR CCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAGCTCCGCAGGGAACTTaGTCTGGAACTGGCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTAPQGT*SGTGSV Trigger: CACGCTGCCAGTTCCAGACCAAGTTCCCTGCGGAGC...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| CDS-3UTR GCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACACCGTCACTTACGTCCTaGCGCAAAAAGCCTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTPSLTS*RKKPLP Trigger: GGGAAGAGGCTTTTTGCGGCAGGACGTAAGTGACGG...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520817.5 |
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| CDS-3UTR TCA 90 bp | AACAAGCAGCACGTATCATATCTTTCCAACATTCAAGGTAATGGAACAATGACAGTTATTGCAACAGGTTaGAAATGCAGACACACTATT | + |
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Preference number: 4 (lower is better) Translates to: NKQHVSYLSNIQGNGTMTVIATG*KCRHTI Trigger: AATAGTGTGTCTGCATTTTCAACCTGTTGCAATAAC...TGTCATTGTTCCATTACCTTGAATGTTGGAAAGATATGATACGTGCTGCTTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000357743.9 ENST00000405786.2 ENST00000520817.5 |
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| CDS GCA 72 bp | TGGGACCCACCCTCTCCTCCGGCCGTAAAGCCACCCTaGCGAAGCTGCGCGCTGTGGGGCTGGGCCGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: WDPPSPPAVKPP*RSCALWGWAEE Trigger: TTCCTCGGCCCAGCCCCACAGCGCGCAGCTTCGGCAGGGTGGCTTTACGGCCGGAGGAGAGGGTGGGTCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518270.5 |
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| CDS CCA 72 bp | TTCCCCGCCCCTCAGCTCGGCCTCCTACCTCAGGTCTaGGACCCACCCTCTCCTCCGGCCGTAAAGCCACCC | + |
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Preference number: 6 (lower is better) Translates to: FPAPQLGLLPQV*DPPSPPAVKPP Trigger: GGGTGGCTTTACGGCCGGAGGAGAGGGTGGGTCCCAGACCTGAGGTAGGAGGCCGAGCTGAGGGGCGGGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518270.5 |
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