Pregenerated sensors for GOLGA6L6 (Homo sapiens)
Ensembl gene IDs: ENSG00000277322Ensembl transcript IDs: ENST00000619213.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTTAGTCCCAAAGTAGATGAAGGCGATCTGCCCTTACTCCAATTGTGTGCCATACTGGTCTTGAACTCTTaGCCTCAGGTCATCCATTTA | + |
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Preference number: 2 (lower is better) Translates to: LSPKVDEGDLPLLQLCAILVLNS*PQVIHL Trigger: TAAATGGATGACCTGAGGTCAAGAGTTCAAGACCAG...TATGGCACACAATTGGAGTAAGGGCAGATCGCCTTCATCTACTTTGGGACTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| 3UTR-3UTR TCA 90 bp | TGGATGATAGAAATACTCTGTATCTTCAAAGGAGGTGGGTTCCATAGTAATGTTCTCACAGGGCTGAAATaGCCTAATGAGAATTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: WMIEILCIFKGGGFHSNVLTGLK*PNENLG Trigger: ACCCAAATTCTCATTAGGTCATTTCAGCCCTGTGAG...AACATTACTATGGAACCCACCTCCTTTGAAGATACAGAGTATTTCTATCATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| 3UTR-3UTR TCA 90 bp | TGGATGATAGAAATACTCTGTATCTTCAAAGGAGGTGGGTTCCATAGTAATGTTGCACTCTCACAGGGCTaGAATGACCTAATGAGAATT | + |
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Preference number: 2 (lower is better) Translates to: WMIEILCIFKGGGFHSNVALSQG*NDLMRI Trigger: AATTCTCATTAGGTCATTTCAGCCCTGTGAGAGTGC...AACATTACTATGGAACCCACCTCCTTTGAAGATACAGAGTATTTCTATCATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| 3UTR-3UTR TCA 90 bp | TGGATGATAGAAATACTCTGTATCTTCAAAGGAGGTGGGTTCCATAGTAATGTTGCCTGGAAAACATGGTaGAATCCTGCCTCTATTAAA | + |
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Preference number: 2 (lower is better) Translates to: WMIEILCIFKGGGFHSNVAWKTW*NPASIK Trigger: TTTAATAGAGGCAGGATTTCACCATGTTTTCCAGGC...AACATTACTATGGAACCCACCTCCTTTGAAGATACAGAGTATTTCTATCATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| 3UTR TCA 72 bp | GAGAGCCTAGCTGAATGTTTGGCACTCTCACAGGGCTaGAATGACCTAATGAGAATTTGGGTCCCAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ESLAECLALSQG*NDLMRIWVPGR Trigger: CCTTCCTGGGACCCAAATTCTCATTAGGTCATTTCAGCCCTGTGAGAGTGCCAAACATTCAGCTAGGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| CDS-3UTR TCA 90 bp | CTTAGTCCCAAAGTAGATGAAGGCGATCTGCCCTTACTCCAATTGTGTGCCATACAGTCAGGACTTGAGTaGCCAGGCCTAGGAGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LSPKVDEGDLPLLQLCAIQSGLE*PGLGGD Trigger: ATCACCTCCTAGGCCTGGTCACTCAAGTCCTGACTG...TATGGCACACAATTGGAGTAAGGGCAGATCGCCTTCATCTACTTTGGGACTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| CDS-3UTR GCA 90 bp | CTTAGTCCCAAAGTAGATGAAGGCGATCTGCCCTTACTCCAATTGTGTGCCATACTGATGTTGATGGCTTaGCTTCTGTTCATCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSPKVDEGDLPLLQLCAILMLMA*LLFILR Trigger: CCTGAGGATGAACAGAAGGCAAGCCATCAACATCAG...TATGGCACACAATTGGAGTAAGGGCAGATCGCCTTCATCTACTTTGGGACTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| CDS-3UTR TCA 90 bp | CTTAGTCCCAAAGTAGATGAAGGCGATCTGCCCTTACTCCAATTGTGTGCCATACTCACAGGGCTGAAATaGCCTAATGAGAATTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSPKVDEGDLPLLQLCAILTGLK*PNENLG Trigger: ACCCAAATTCTCATTAGGTCATTTCAGCCCTGTGAG...TATGGCACACAATTGGAGTAAGGGCAGATCGCCTTCATCTACTTTGGGACTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| CDS-3UTR TCA 90 bp | CTTAGTCCCAAAGTAGATGAAGGCGATCTGCCCTTACTCCAATTGTGTGCCATAGCCTGGAAAACATGGTaGAATCCTGCCTCTATTAAA | + |
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Preference number: 4 (lower is better) Translates to: LSPKVDEGDLPLLQLCAIAWKTW*NPASIK Trigger: TTTAATAGAGGCAGGATTTCACCATGTTTTCCAGGC...TATGGCACACAATTGGAGTAAGGGCAGATCGCCTTCATCTACTTTGGGACTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| CDS-3UTR GCA 90 bp | CTTAGTCCCAAAGTAGATGAAGGCGATCTGCCCTTACTCCAATTGTGTGCCATACTCAATGTACCTATCTaGCTTCTTCTTCTGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LSPKVDEGDLPLLQLCAILNVPI*LLLLCS Trigger: GCTACACAGAAGAAGAAGGCAGATAGGTACATTGAG...TATGGCACACAATTGGAGTAAGGGCAGATCGCCTTCATCTACTTTGGGACTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| CDS-3UTR TCA 90 bp | TGGATGATAGAAATACTCTGTATCTTCAAAGGAGGTGGGTTCCATAGTAATGTTAGGCAGAGGTTACAGTaGGCAGAGATCGTGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: WMIEILCIFKGGGFHSNVRQRLQ*AEIVPL Trigger: CAATGGCACGATCTCTGCTCACTGTAACCTCTGCCT...AACATTACTATGGAACCCACCTCCTTTGAAGATACAGAGTATTTCTATCATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| CDS-3UTR CCA 90 bp | TGGATGATAGAAATACTCTGTATCTTCAAAGGAGGTGGGTTCCATAGTAATGTTCATTGCACTAGAGCCTaGGCAACAGCGCAATACTCC | + |
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Preference number: 4 (lower is better) Translates to: WMIEILCIFKGGGFHSNVHCTRA*ATAQYS Trigger: GGAGTATTGCGCTGTTGCCCAGGCTCTAGTGCAATG...AACATTACTATGGAACCCACCTCCTTTGAAGATACAGAGTATTTCTATCATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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| CDS-3UTR TCA 90 bp | TGGATGATAGAAATACTCTGTATCTTCAAAGGAGGTGGGTTCCATAGTAATGTTCTGGTCTTGAACTCTTaGCCTCAGGTCATCCATTTA | + |
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Preference number: 4 (lower is better) Translates to: WMIEILCIFKGGGFHSNVLVLNS*PQVIHL Trigger: TAAATGGATGACCTGAGGTCAAGAGTTCAAGACCAG...AACATTACTATGGAACCCACCTCCTTTGAAGATACAGAGTATTTCTATCATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619213.1 |
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