Pregenerated sensors for GOLGA6L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000273976, ENSG00000278247

Ensembl transcript IDs: ENST00000614055.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	AAGAGGCTGGAGAGCCTAGCTGAATGTTTGGCACTCTCACAGGGCTaGAATGACCTAATGAGAATTTGGGTCCCAGGAAGGAGATGGGAC	+
Preference number: 1 (lower is better) Translates to: KRLESLAECLALSQG*NDLMRIWVPGRRWD Trigger: GTCCCATCTCCTTCCTGGGACCCAAATTCTCATTAGGTCATTTCAGCCCTGTGAGAGTGCCAAACATTCAGCTAGGCTCTCCAGCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614055.2
3UTR TCA 90 bp	ATACTCTGTATCTTCAAAGGAGGTGGGTTCCATAGTAATGTTAAATaGGTTAAAACTCATCAAAATGTAAACCAGACCTGTGCATTTCAC	+
Preference number: 1 (lower is better) Translates to: ILCIFKGGGFHSNVK*VKTHQNVNQTCAFH Trigger: GTGAAATGCACAGGTCTGGTTTACATTTTGATGAGTTTTAACTCATTTAACATTACTATGGAACCCACCTCCTTTGAAGATACAGAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000614055.2
CDS-3UTR GCA 90 bp	CAGAGGAGCTTGTTACAGATTCGCCTCCCCACAAGAGCAGTTAGAAAAACTGGAGCCTCCGCCTGCAGCTaGTGCTGTGGCAGCAGGAGC	+
Preference number: 4 (lower is better) Translates to: QRSLLQIRLPTRAVRKTGASACS*CCGSRS Trigger: GCTCCTGCTGCCACAGCAGCAGCTGCAGGCGGAGGC...TCCAGTTTTTCTAACTGCTCTTGTGGGGAGGCGAATCTGTAACAAGCTCCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614055.2
CDS-3UTR GCA 90 bp	CAGAGGAGCTTGTTACAGATTCGCCTCCCCACAAGAGCAGTTAGAAAAACTGGAATGGCAGCTTCCAGGTaGTCCTGGTGTTCCTGCATC	+
Preference number: 4 (lower is better) Translates to: QRSLLQIRLPTRAVRKTGMAASR*SWCSCI Trigger: GATGCAGGAACACCAGGAGCACCTGGAAGCTGCCAT...TCCAGTTTTTCTAACTGCTCTTGTGGGGAGGCGAATCTGTAACAAGCTCCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614055.2
CDS-3UTR GCA 90 bp	CAGAGGAGCTTGTTACAGATTCGCCTCCCCACAAGAGCAGTTAGAAAAACTGGATCACCCAGGCTTGAGTaGAGTGGCACGATCTCAGCT	+
Preference number: 4 (lower is better) Translates to: QRSLLQIRLPTRAVRKTGSPRLE*SGTISA Trigger: AGCTGAGATCGTGCCACTGCACTCAAGCCTGGGTGA...TCCAGTTTTTCTAACTGCTCTTGTGGGGAGGCGAATCTGTAACAAGCTCCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614055.2
CDS-3UTR GCA 90 bp	CAGAGGAGCTTGTTACAGATTCGCCTCCCCACAAGAGCAGTTAGAAAAACTGGAAGGCATGCGCCACCATaGCCGGCTAATTTTTGTATT	+
Preference number: 4 (lower is better) Translates to: QRSLLQIRLPTRAVRKTGRHAPP*PANFCI Trigger: AATACAAAAATTAGCCGGGCATGGTGGCGCATGCCT...TCCAGTTTTTCTAACTGCTCTTGTGGGGAGGCGAATCTGTAACAAGCTCCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000614055.2
CDS-3UTR GCA 90 bp	CAGAGGAGCTTGTTACAGATTCGCCTCCCCACAAGAGCAGTTAGAAAAACTGGACTTACTCCAATTGTGTaGCATAAACTCAAAGTCAAT	+
Preference number: 4 (lower is better) Translates to: QRSLLQIRLPTRAVRKTGLTPIV*HKLKVN Trigger: ATTGACTTTGAGTTTATGGCACACAATTGGAGTAAG...TCCAGTTTTTCTAACTGCTCTTGTGGGGAGGCGAATCTGTAACAAGCTCCTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000614055.2

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