Pregenerated sensors for GOLGA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000167110

Ensembl transcript IDs: ENST00000490257.5, ENST00000490628.2, ENST00000496221.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	AAAGAGAGGCCCAAAAAGCTCAAGCAATTTGCCCTAAATCACATCCCTAGCAGACACATCCCTAGCAGATaGACAGGTAGGATACAAACC	+
Preference number: 4 (lower is better) Translates to: KERPKKLKQFALNHIPSRHIPSR*TGRIQT Trigger: GGTTTGTATCCTACCTGTCCATCTGCTAGGGATGTG...TCTGCTAGGGATGTGATTTAGGGCAAATTGCTTGAGCTTTTTGGGCCTCTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490628.2
CDS TCA 90 bp	AGTCCCACTACCGATCAGCATGGGAGTTCTGACCTGCTTCATTTCTaGCCTGGGCCAGTTCACCCATCCTTAGGTAAGCTGGTAGTGCCC	+
Preference number: 5 (lower is better) Translates to: SPTTDQHGSSDLLHF*PGPVHPSLGKLVVP Trigger: GGGCACTACCAGCTTACCTAAGGATGGGTGAACTGGCCCAGGTCAGAAATGAAGCAGGTCAGAACTCCCATGCTGATCGGTAGTGGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496221.1
CDS TCA 90 bp	ATGTACAGGCCAGAGAAAAGATACGAGTTACCCAAGGCTACACCATaGGTCAGTGGCACAGCTGGCACTAGAGCTTTGCTGGGCACACAT	+
Preference number: 5 (lower is better) Translates to: MYRPEKRYELPKATP*VSGTAGTRALLGTH Trigger: ATGTGTGCCCAGCAAAGCTCTAGTGCCAGCTGTGCCACTGACTCATGGTGTAGCCTTGGGTAACTCGTATCTTTTCTCTGGCCTGTACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490257.5
CDS TCA 72 bp	CAGGTGCAGTCCCACTACCGATCAGCATGGGAGTTCTaGCCTGCTTCATTTCTGACCTGGGCCAGTTCACCC	+
Preference number: 6 (lower is better) Translates to: QVQSHYRSAWEF*PASFLTWASSP Trigger: GGGTGAACTGGCCCAGGTCAGAAATGAAGCAGGTCAGAACTCCCATGCTGATCGGTAGTGGGACTGCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496221.1
CDS TCA 72 bp	ACCGATCAGCATGGGAGTTCTGACCTGCTTCATTTCTaGCCTGGGCCAGTTCACCCATCCTTAGGTAAGCTG	+
Preference number: 6 (lower is better) Translates to: TDQHGSSDLLHF*PGPVHPSLGKL Trigger: CAGCTTACCTAAGGATGGGTGAACTGGCCCAGGTCAGAAATGAAGCAGGTCAGAACTCCCATGCTGATCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496221.1
CDS TCA 72 bp	CCAGAGAAAAGATACGAGTTACCCAAGGCTACACCATaGGTCAGTGGCACAGCTGGCACTAGAGCTTTGCTG	+
Preference number: 6 (lower is better) Translates to: PEKRYELPKATP*VSGTAGTRALL Trigger: CAGCAAAGCTCTAGTGCCAGCTGTGCCACTGACTCATGGTGTAGCCTTGGGTAACTCGTATCTTTTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490257.5
CDS GCA 72 bp	CCAGTTCACCCATCCTTAGGTAAGCTGGTAGTGCCCTaGTCCCAGGAAGTCACCATATTGATGCCGAACTTA	+
Preference number: 6 (lower is better) Translates to: PVHPSLGKLVVP*SQEVTILMPNL Trigger: TAAGTTCGGCATCAATATGGTGACTTCCTGGGAGCAGGGCACTACCAGCTTACCTAAGGATGGGTGAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496221.1
CDS TCA 72 bp	ACCAGACAGAAAAAGACAGACAGGAGCCCTTGGCCCTaGGGTTTACATTCTAATGGGCCTTTAAATCTTGGA	+
Preference number: 6 (lower is better) Translates to: TRQKKTDRSPWP*GLHSNGPLNLG Trigger: TCCAAGATTTAAAGGCCCATTAGAATGTAAACCTCAGGGCCAAGGGCTCCTGTCTGTCTTTTTCTGTCTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000490257.5

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