RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNS (Homo sapiens)

Ensembl gene IDs: ENSG00000135677

Ensembl transcript IDs: ENST00000258145.8, ENST00000418919.6, ENST00000537823.1, ENST00000540196.5, ENST00000540883.1, ENST00000541781.5, ENST00000542058.5, ENST00000543646.5, ENST00000545273.1

Found 515 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACTCCTaGCACATGGGCAGAGTTCACAGTTTAACACATTGCACGAGGAAG +
Preference number: 1 (lower is better)
Translates to: ECPCQLKEETRDSHS*HMGRVHSLTHCTRK
Trigger: CTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCCCATGTGTCAGGAGTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
3UTR CCA 90 bp GTGTTAACTGGCACTCCCTGTGGTTGGCAGCCACTGGAAAGTAGATaGCTATCACCTTCAAGAGCTACCTGGAATTGGCCTTTATCACAA +
Preference number: 1 (lower is better)
Translates to: VLTGTPCGWQPLESR*LSPSRATWNWPLSQ
Trigger: TTGTGATAAAGGCCAATTCCAGGTAGCTCTTGAAGGTGATAGCCATCTACTTTCCAGTGGCTGCCAACCACAGGGAGTGCCAGTTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CCA 90 bp CCTGTCTTCAGAAGGCCCTCGGAAGAGACAACCTTCACCAACTCTTaGCAGTTCTTCACTGCTGATGTTCCTAAGCCACTTCATTTTTCA +
Preference number: 1 (lower is better)
Translates to: PVFRRPSEETTFTNS*QFFTADVPKPLHFS
Trigger: TGAAAAATGAAGTGGCTTAGGAACATCAGCAGTGAAGAACTGCCAAGAGTTGGTGAAGGTTGTCTCTTCCGAGGGCCTTCTGAAGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 90 bp CATGGGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTaGCTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAA +
Preference number: 1 (lower is better)
Translates to: HGQSSQFNTLHEEVS*LGCFFKQDLKPAQK
Trigger: TTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
3UTR CCA 90 bp TGGCAGCCACTGGAAAGTAGATGGCTATCACCTTCAAGAGCTACCTaGAATTGGCCTTTATCACAAGCTTACTGCTCTATTTCAGTGCAG +
Preference number: 1 (lower is better)
Translates to: WQPLESRWLSPSRAT*NWPLSQAYCSISVQ
Trigger: CTGCACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGAAGGTGATAGCCATCTACTTTCCAGTGGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 90 bp AAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGTCTTaGAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAG +
Preference number: 1 (lower is better)
Translates to: KQDLKPAQKLFQVWS*RLATDTYYNHFIRK
Trigger: CTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
3UTR TCA 90 bp AGAGGAATAATCAAGAACTGTGGCCCCAGGATAAAAAGAATACAGTaGGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAG +
Preference number: 1 (lower is better)
Translates to: RGIIKNCGPRIKRIQ*EQRPQECPCQLKEE
Trigger: CTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTGGGGCCACAGTTCTTGATTATTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 90 bp GGACAGAAGACTTTAAATAAAGCTAAAATCGCTTATTGCCTGAGTTaGACAAGTTACAAACCACAGCTCTTCCTCCTCCCCTGCTGTCTC +
Preference number: 1 (lower is better)
Translates to: GQKTLNKAKIAYCLS*TSYKPQLFLLPCCL
Trigger: GAGACAGCAGGGGAGGAGGAAGAGCTGTGGTTTGTAACTTGTTCAACTCAGGCAATAAGCGATTTTAGCTTTATTTAAAGTCTTCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR GCA 90 bp TCACCTTCAAGAGCTACCTGGAATTGGCCTTTATCACAAGCTTACTaGTCTATTTCAGTGCAGCACCAGCCTAGAATTCACAAAAACATG +
Preference number: 1 (lower is better)
Translates to: SPSRATWNWPLSQAY*SISVQHQPRIHKNM
Trigger: CATGTTTTTGTGAATTCTAGGCTGGTGCTGCACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGAAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CCA 90 bp TCAGTGCAGCACCAGCCTAGAATTCACAAAAACATGAACAGAGCTTaGGTGACATGTTTTGAATTTGCAACCTTACCACACTGTGATGAA +
Preference number: 1 (lower is better)
Translates to: SVQHQPRIHKNMNRA*VTCFEFATLPHCDE
Trigger: TTCATCACAGTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTTCATGTTTTTGTGAATTCTAGGCTGGTGCTGCACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 90 bp TCATGTGAGGTAAAGGAATATATCCAATTGACTGTTAGCCCAACATaGCTATCTGCAATTCTGATAGAAAAGCTACTTTCAGCCATGTCT +
Preference number: 1 (lower is better)
Translates to: SCEVKEYIQLTVSPT*LSAILIEKLLSAMS
Trigger: AGACATGGCTGAAAGTAGCTTTTCTATCAGAATTGCAGATAGTCATGTTGGGCTAACAGTCAATTGGATATATTCCTTTACCTCACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 90 bp ATTTGTCAAATTCAAAGATGCTCAAAAGGTGTTCCCTACTTTGCATaGGAGGGAGAGCTTTGTAACAGGAAATTGTATAAGGCAAACTCT +
Preference number: 1 (lower is better)
Translates to: ICQIQRCSKGVPYFA*EGELCNRKLYKANS
Trigger: AGAGTTTGCCTTATACAATTTCCTGTTACAAAGCTCTCCCTCTCATGCAAAGTAGGGAACACCTTTTGAGCATCTTTGAATTTGACAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 90 bp GTATCTCTACTTATCAATCAACAATGGTACTTGTTCTTACTTGGATaGTTCAGCTCTGATGGTTACTCTTCAAGCCATGTGATGTTAGTA +
Preference number: 1 (lower is better)
Translates to: VSLLINQQWYLFLLG*FSSDGYSSSHVMLV
Trigger: TACTAACATCACATGGCTTGAAGAGTAACCATCAGAGCTGAATCATCCAAGTAAGAACAAGTACCATTGTTGATTGATAAGTAGAGATAC
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR TCA 90 bp GGCGTGGCTGAGGTGCCGTCAGCAGCTGACTATGTCACTCTTATGAGTTCTGCTTTCCAGGTGTGGTCTTaGAGACTAGCTACAGACACC +
Preference number: 2 (lower is better)
Translates to: GVAEVPSAADYVTLMSSAFQVWS*RLATDT
Trigger: GGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAA...AGCAGAACTCATAAGAGTGACATAGTCAGCTGCTGACGGCACCTCAGCCACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCAACTGGCACTCCCTGTaGTTGGCAGCCACTGGAAAG +
Preference number: 2 (lower is better)
Translates to: IPKIEERREGCTTSYHASNWHSL*LAATGK
Trigger: CTTTCCAGTGGCTGCCAACCACAGGGAGTGCCAGTT...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR TCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCGTTGCTGGGGTCATGTaGGGTAAAGGAATATATCCA +
Preference number: 2 (lower is better)
Translates to: IPKIEERREGCTTSYHASVAGVM*GKGIYP
Trigger: TGGATATATTCCTTTACCTCACATGACCCCAGCAAC...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR GCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACATCAGAAAGAGGCGTaGAGGGATCCATCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSHQKEA*RDPSAE
Trigger: CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATG...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
3UTR-3UTR CCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCCCTTCAAGAGCTACCTaGAATTGGCCTTTATCACAA +
Preference number: 2 (lower is better)
Translates to: IPKIEERREGCTTSYHASPSRAT*NWPLSQ
Trigger: TTGTGATAAAGGCCAATTCCAGGTAGCTCTTGAAGG...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CAA 90 bp CAGGATAAAAAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTaGTCAGCTAAAGGAAGAGACCAGAGACAGCCACTCCTGACACAT +
Preference number: 2 (lower is better)
Translates to: QDKKNTVRTKTSGVS*SAKGRDQRQPLLTH
Trigger: ATGTGTCAGGAGTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CAA 90 bp GAATTTCCTTCTCTAAAACATTCACAGCAGAGGTGTCCATTTCACTaGCCTGTTTCACCTCTAGATACCACCACAGTTGCTGGGGTCATG +
Preference number: 2 (lower is better)
Translates to: EFPSLKHSQQRCPFH*PVSPLDTTTVAGVM
Trigger: CATGACCCCAGCAACTGTGGTGGTATCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGAGAAGGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR TCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCACTGTTAGCCCAACATaGCTATCTGCAATTCTGATA +
Preference number: 2 (lower is better)
Translates to: IPKIEERREGCTTSYHASTVSPT*LSAILI
Trigger: TATCAGAATTGCAGATAGTCATGTTGGGCTAACAGT...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR GCA 90 bp ATGCAGATAGAGCCAATGACTTCATACATGGAACTTAAATTCAAGCTCCCTGCTCATCAGAAAGAGGCGTaGAGGGATCCATCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: MQIEPMTSYMELKFKLPAHQKEA*RDPSAE
Trigger: CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATG...AGCAGGGAGCTTGAATTTAAGTTCCATGTATGAAGTCATTGGCTCTATCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CAA 90 bp CAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGTCTaGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAA +
Preference number: 2 (lower is better)
Translates to: QTGLKASPETLPGVV*KTSYRHLLQSLHQK
Trigger: TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
3UTR-3UTR TCA 90 bp GGTAAAACTCAAGAACCCAACTCTACCCATCTAATTCCATTGGTGGATCAGTTGCACGAGGAAGTCAGCTaGCTGGGTTGCTTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: GKTQEPNSTHLIPLVDQLHEEVS*LGCFFK
Trigger: TTTGAAAAAGCAACCCAGTCAGCTGACTTCCTCGTG...CAACTGATCCACCAATGGAATTAGATGGGTAGAGTTGGGTTCTTGAGTTTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR GCA 90 bp AATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCACAGTTTAACACATTaGACGAGGAAGTCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: NTVRTKTSGVSLSAKGRDHSLTH*TRKSAD
Trigger: GTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTG...GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
3UTR-3UTR GCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCTGTGTCCTAAAGTACTaGCATTTATCTGAATGGGTT +
Preference number: 2 (lower is better)
Translates to: IPKIEERREGCTTSYHASCVLKY*HLSEWV
Trigger: AACCCATTCAGATAAATGGCAGTACTTTAGGACACA...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR TCA 90 bp CAAACTCTCTATTCATTCCTAAGGCCTCTGTTCATTCCTAATGTTTACATGGTTGGTGCCGTCAGCAGCTaGCTATGTCACTCTTATGAG +
Preference number: 2 (lower is better)
Translates to: QTLYSFLRPLFIPNVYMVGAVSS*LCHSYE
Trigger: CTCATAAGAGTGACATAGTCAGCTGCTGACGGCACC...AACCATGTAAACATTAGGAATGAACAGAGGCCTTAGGAATGAATAGAGAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CCA 90 bp TCTAAAACATTCACAGCAGAGGTGTCCATTTCACTTGCCTGTTTCACCTCTAGACCACTGGAAAGTAGATaGCTATCACCTTCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: SKTFTAEVSISLACFTSRPLESR*LSPSRA
Trigger: AGCTCTTGAAGGTGATAGCCATCTACTTTCCAGTGG...TCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CCA 90 bp TCTAAAACATTCACAGCAGAGGTGTCCATTTCACTTGCCTGTTTCACCTCTAGATCTTTCCTTTATCCCTaGTACAGCCCTTCCACTTGT +
Preference number: 2 (lower is better)
Translates to: SKTFTAEVSISLACFTSRSFLYP*YSPSTC
Trigger: ACAAGTGGAAGGGCTGTACCAGGGATAAAGGAAAGA...TCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR GCA 90 bp TTAAAAGGAGGCAGCAAGCTTCTTGCAGTGGGTCCCTTAAACATTATGAAAACAACTGCTCTATTTCAGTaGAGCACCAGCCTAGAATTC +
Preference number: 2 (lower is better)
Translates to: LKGGSKLLAVGPLNIMKTTALFQ*STSLEF
Trigger: GAATTCTAGGCTGGTGCTGCACTGAAATAGAGCAGT...TGTTTTCATAATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCTCCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR TCA 90 bp TTCATTTTTCAGATCTCAGAGGGGAGTCTCAAGAGAAGGGACCTTGCCTTAATCATAAAAAGAATACAGTaGGAACAAAGACCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: FIFQISEGSLKRRDLALIIKRIQ*EQRPQE
Trigger: CTCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTAT...GATTAAGGCAAGGTCCCTTCTCTTGAGACTCCCCTCTGAGATCTGAAAAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR TCA 90 bp GGTAAAACTCAAGAACCCAACTCTACCCATCTAATTCCATTGGTGGATCAGTTGTTGTTCTTACTTGGATaGTTCAGCTCTGATGGTTAC +
Preference number: 2 (lower is better)
Translates to: GKTQEPNSTHLIPLVDQLLFLLG*FSSDGY
Trigger: GTAACCATCAGAGCTGAATCATCCAAGTAAGAACAA...CAACTGATCCACCAATGGAATTAGATGGGTAGAGTTGGGTTCTTGAGTTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CAA 90 bp GCACCATTTGTCAAATTCAAAGATGCTCAAAAGGTGTTCCCTACTTaGCATGAGAGGGAGAGCTTTGTAACAGGAAATTGTATAAGGCAA +
Preference number: 2 (lower is better)
Translates to: APFVKFKDAQKVFPT*HERESFVTGNCIRQ
Trigger: TTGCCTTATACAATTTCCTGTTACAAAGCTCTCCCTCTCATGCAAAGTAGGGAACACCTTTTGAGCATCTTTGAATTTGACAAATGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR TCA 90 bp TCTAAAACATTCACAGCAGAGGTGTCCATTTCACTTGCCTGTTTCACCTCTAGAGTACTGCCATTTATCTaGATGGGTTTACAAATTCAG +
Preference number: 2 (lower is better)
Translates to: SKTFTAEVSISLACFTSRVLPFI*MGLQIQ
Trigger: CTGAATTTGTAAACCCATTCAGATAAATGGCAGTAC...TCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR GCA 90 bp AATACTGATAATCATACAAGACTCCAAAACTCAGGAAGAACCCATCTAAAAGGGCACAGTTTAACACATTaGACGAGGAAGTCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: NTDNHTRLQNSGRTHLKGHSLTH*TRKSAD
Trigger: GTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTG...CCCTTTTAGATGGGTTCTTCCTGAGTTTTGGAGTCTTGTATGATTATCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR GCA 90 bp CAAACTCTCTATTCATTCCTAAGGCCTCTGTTCATTCCTAATGTTTACATGGTTACTGCTCTATTTCAGTaGAGCACCAGCCTAGAATTC +
Preference number: 2 (lower is better)
Translates to: QTLYSFLRPLFIPNVYMVTALFQ*STSLEF
Trigger: GAATTCTAGGCTGGTGCTGCACTGAAATAGAGCAGT...AACCATGTAAACATTAGGAATGAACAGAGGCCTTAGGAATGAATAGAGAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR TCA 90 bp TTAAAAGGAGGCAGCAAGCTTCTTGCAGTGGGTCCCTTAAACATTATGAAAACAAAATCGCTTATTGCCTaGGTTGAACAAGTTACAAAC +
Preference number: 2 (lower is better)
Translates to: LKGGSKLLAVGPLNIMKTKSLIA*VEQVTN
Trigger: GTTTGTAACTTGTTCAACTCAGGCAATAAGCGATTT...TGTTTTCATAATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCTCCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CAA 90 bp ATTTTTGATAGTGAAGTGCTCAATCTGAAATGCTACACAGGTCCTTaGACTTTAGGTCAAGCTTACATATCAAAAGGTGTGTCTGTGTGT +
Preference number: 2 (lower is better)
Translates to: IFDSEVLNLKCYTGP*TLGQAYISKGVSVC
Trigger: ACACACAGACACACCTTTTGATATGTAAGCTTGACCTAAAGTCAAAGGACCTGTGTAGCATTTCAGATTGAGCACTTCACTATCAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CCA 90 bp TTAAAAGGAGGCAGCAAGCTTCTTGCAGTGGGTCCCTTAAACATTATGAAAACAAACATGAACAGAGCTTaGGTGACATGTTTTGAATTT +
Preference number: 2 (lower is better)
Translates to: LKGGSKLLAVGPLNIMKTNMNRA*VTCFEF
Trigger: AAATTCAAAACATGTCACCCAAGCTCTGTTCATGTT...TGTTTTCATAATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCTCCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR GCA 90 bp CAAACTCTCTATTCATTCCTAAGGCCTCTGTTCATTCCTAATGTTTACATGGTTCCCAACATGACTATCTaGAATTCTGATAGAAAAGCT +
Preference number: 2 (lower is better)
Translates to: QTLYSFLRPLFIPNVYMVPNMTI*NSDRKA
Trigger: AGCTTTTCTATCAGAATTGCAGATAGTCATGTTGGG...AACCATGTAAACATTAGGAATGAACAGAGGCCTTAGGAATGAATAGAGAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CCA 90 bp CAAACTCTCTATTCATTCCTAAGGCCTCTGTTCATTCCTAATGTTTACATGGTTAATAATCAAGAACTGTaGCCCCAGGATAAAAAGAAT +
Preference number: 2 (lower is better)
Translates to: QTLYSFLRPLFIPNVYMVNNQEL*PQDKKN
Trigger: ATTCTTTTTATCCTGGGGCCACAGTTCTTGATTATT...AACCATGTAAACATTAGGAATGAACAGAGGCCTTAGGAATGAATAGAGAGTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CCA 72 bp GCTCCCTGCTGGACAGGCACTTCTTTCCTTTATCCCTaGTACAGCCCTTCCACTTGTCTGTTCAAGAGCCCT +
Preference number: 3 (lower is better)
Translates to: APCWTGTSFLYP*YSPSTCLFKSP
Trigger: AGGGCTCTTGAACAGACAAGTGGAAGGGCTGTACCAGGGATAAAGGAAAGAAGTGCCTGTCCAGCAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CCA 72 bp AGAAGGCCCTCGGAAGAGACAACCTTCACCAACTCTTaGCAGTTCTTCACTGCTGATGTTCCTAAGCCACTT +
Preference number: 3 (lower is better)
Translates to: RRPSEETTFTNS*QFFTADVPKPL
Trigger: AAGTGGCTTAGGAACATCAGCAGTGAAGAACTGCCAAGAGTTGGTGAAGGTTGTCTCTTCCGAGGGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 72 bp TGTCAGCTAAAGGAAGAGACCAGAGACAGCCACTCCTaGCACATGGGCAGAGTTCACAGTTTAACACATTGC +
Preference number: 3 (lower is better)
Translates to: CQLKEETRDSHS*HMGRVHSLTHC
Trigger: GCAATGTGTTAAACTGTGAACTCTGCCCATGTGTCAGGAGTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
3UTR GCA 72 bp GGAAATATACCAAAAATAGAAGAGCGTAGAGAGGGCTaGACCACATCCTACCACGCAAGCACACCCACTGAA +
Preference number: 3 (lower is better)
Translates to: GNIPKIEERREG*TTSYHASTPTE
Trigger: TTCAGTGGGTGTGCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTATATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CAA 90 bp TCAAGAGCTACCTGGAATTGGCCTTTATCACAAGCTTACTGCTCTATTTCAGTGCTTCCAGGTGTGGTCTaGAAGACTAGCTACAGACAC +
Preference number: 3 (lower is better)
Translates to: SRATWNWPLSQAYCSISVLPGVV*KTSYRH
Trigger: GTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG...CACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CAA 90 bp CAAACTCTCTATTCATTCCTAAGGCCTCTGTTCATTCCTAATGTTTACATGGTTGCTGAGATCATGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: QTLYSFLRPLFIPNVYMVAEIMP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGATCTCAGC...AACCATGTAAACATTAGGAATGAACAGAGGCCTTAGGAATGAATAGAGAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CAA 90 bp TTCATTTTTCAGATCTCAGAGGGGAGTCTCAAGAGAAGGGACCTTGCCTTAATCTGCTACACAGGTCCTTaGACTTTAGGTCAAGCTTAC +
Preference number: 3 (lower is better)
Translates to: FIFQISEGSLKRRDLALICYTGP*TLGQAY
Trigger: GTAAGCTTGACCTAAAGTCAAAGGACCTGTGTAGCA...GATTAAGGCAAGGTCCCTTCTCTTGAGACTCCCCTCTGAGATCTGAAAAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CAA 90 bp TTCATTTTTCAGATCTCAGAGGGGAGTCTCAAGAGAAGGGACCTTGCCTTAATCAAGAGCTACCTGGAATaGGCCTTTATCACAAGCTTA +
Preference number: 3 (lower is better)
Translates to: FIFQISEGSLKRRDLALIKSYLE*AFITSL
Trigger: TAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTT...GATTAAGGCAAGGTCCCTTCTCTTGAGACTCCCCTCTGAGATCTGAAAAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR-3UTR CAA 90 bp GGTAAAACTCAAGAACCCAACTCTACCCATCTAATTCCATTGGTGGATCAGTTGAGGTGTCCATTTCACTaGCCTGTTTCACCTCTAGAT +
Preference number: 3 (lower is better)
Translates to: GKTQEPNSTHLIPLVDQLRCPFH*PVSPLD
Trigger: ATCTAGAGGTGAAACAGGCAAGTGAAATGGACACCT...CAACTGATCCACCAATGGAATTAGATGGGTAGAGTTGGGTTCTTGAGTTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 72 bp AGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTaGCTGGGTTGCTTTTTCAAACAGGACTTAAAGCCA +
Preference number: 3 (lower is better)
Translates to: SSQFNTLHEEVS*LGCFFKQDLKP
Trigger: TGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
3UTR CCA 72 bp CTGGAAAGTAGATGGCTATCACCTTCAAGAGCTACCTaGAATTGGCCTTTATCACAAGCTTACTGCTCTATT +
Preference number: 3 (lower is better)
Translates to: LESRWLSPSRAT*NWPLSQAYCSI
Trigger: AATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGAAGGTGATAGCCATCTACTTTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CCA 72 bp CACCAGCCTAGAATTCACAAAAACATGAACAGAGCTTaGGTGACATGTTTTGAATTTGCAACCTTACCACAC +
Preference number: 3 (lower is better)
Translates to: HQPRIHKNMNRA*VTCFEFATLPH
Trigger: GTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTTCATGTTTTTGTGAATTCTAGGCTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 72 bp ACTTTAAATAAAGCTAAAATCGCTTATTGCCTGAGTTaGACAAGTTACAAACCACAGCTCTTCCTCCTCCCC +
Preference number: 3 (lower is better)
Translates to: TLNKAKIAYCLS*TSYKPQLFLLP
Trigger: GGGGAGGAGGAAGAGCTGTGGTTTGTAACTTGTTCAACTCAGGCAATAAGCGATTTTAGCTTTATTTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 72 bp CTTATCAATCAACAATGGTACTTGTTCTTACTTGGATaGTTCAGCTCTGATGGTTACTCTTCAAGCCATGTG +
Preference number: 3 (lower is better)
Translates to: LINQQWYLFLLG*FSSDGYSSSHV
Trigger: CACATGGCTTGAAGAGTAACCATCAGAGCTGAATCATCCAAGTAAGAACAAGTACCATTGTTGATTGATAAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR TCA 72 bp ATTCAAAGATGCTCAAAAGGTGTTCCCTACTTTGCATaGGAGGGAGAGCTTTGTAACAGGAAATTGTATAAG +
Preference number: 3 (lower is better)
Translates to: IQRCSKGVPYFA*EGELCNRKLYK
Trigger: CTTATACAATTTCCTGTTACAAAGCTCTCCCTCTCATGCAAAGTAGGGAACACCTTTTGAGCATCTTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR GCA 72 bp AGGTGTGTCTGTGTGTTTGTGTGTGTCCTAAAGTACTaGCATTTATCTGAATGGGTTTACAAATTCAGTCTT +
Preference number: 3 (lower is better)
Translates to: RCVCVFVCVLKY*HLSEWVYKFSL
Trigger: AAGACTGAATTTGTAAACCCATTCAGATAAATGGCAGTACTTTAGGACACACACAAACACACAGACACACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR GCA 72 bp GTTAGTATTTTTGATAGTGAAGTGCTCAATCTGAAATaGTACACAGGTCCTTTGACTTTAGGTCAAGCTTAC +
Preference number: 3 (lower is better)
Translates to: VSIFDSEVLNLK*YTGPLTLGQAY
Trigger: GTAAGCTTGACCTAAAGTCAAAGGACCTGTGTAGCATTTCAGATTGAGCACTTCACTATCAAAAATACTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGGACAGGCTCCGGGGTaGCCCCGGGACGGGACGGGA +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVGQAPG*PRDGTG
Trigger: TCCCGTCCCGTCCCGGGGTCACCCCGGAGCCTGTCC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGCGTGGCTGAGGTGCCGTCAGCAGCTGACTATGTCACTCTTATGAGTTCTGCTGCACTCCAGCCCGGGTaGCAACCGCGAGACTTCATC +
Preference number: 4 (lower is better)
Translates to: GVAEVPSAADYVTLMSSAALQPG*QPRDFI
Trigger: GATGAAGTCTCGCGGTTGTCACCCGGGCTGGAGTGC...AGCAGAACTCATAAGAGTGACATAGTCAGCTGCTGACGGCACCTCAGCCACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGGACGCACAGGTAGCTaGAGGGCGAGAGGCCGACCA +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVGRTGS*RARGRP
Trigger: TGGTCGGCCTCTCGCCCTTCAGCTACCTGTGCGTCC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGGACGCACAGGTAGCTaGAGGGCGAGAGGCCGACCA +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAEGRTGS*RARGRP
Trigger: TGGTCGGCCTCTCGCCCTTCAGCTACCTGTGCGTCC...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGGACAGGCTCCGGGGTaGCCCCGGGACGGGACGGGA +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKGQAPG*PRDGTG
Trigger: TCCCGTCCCGTCCCGGGGTCACCCCGGAGCCTGTCC...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGCTGTCCAAGGCGAATaGGGCGCTGGAGTGGCGATC +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVAVQGE*GAGVAI
Trigger: GATCGCCACTCCAGCGCCTCATTCGCCTTGGACAGC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGCTGTCCAAGGCGAATaGGGCGCTGGAGTGGCGATC +
Preference number: 4 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCEAVQGE*GAGVAI
Trigger: GATCGCCACTCCAGCGCCTCATTCGCCTTGGACAGC...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp ATGGGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGGAGCAGCACCACGTTaGGCCTCCGGGTTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: MGRVHSLTHCTRKSADWVGAAPR*ASGFPQ
Trigger: CTGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCC...AACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGGGAGCAGCACCACGTTaGGCCTCCGGGTTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWGAAPR*ASGFPQ
Trigger: CTGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCC...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp ATGGGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGGACGCACAGGTAGCTaGAGGGCGAGAGGCCGACCA +
Preference number: 4 (lower is better)
Translates to: MGRVHSLTHCTRKSADWVGRTGS*RARGRP
Trigger: TGGTCGGCCTCTCGCCCTTCAGCTACCTGTGCGTCC...AACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGCGTCCTGGTCGTCCGTaGGGAGCAGCACCACGTTGG +
Preference number: 4 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVRPGRP*GAAPRW
Trigger: CCAACGTGGTGCTGCTCCTCACGGACGACCAGGACG...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCCAAAAACCCCTGGAGTaGGACAGGTTGGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVQKPLE*DRLAQN
Trigger: GTTCTGGGCCAACCTGTCGCACTCCAGGGGTTTTTG...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTCCGAGATCACGCCACTaGACTCCAGCCCGGGTGACA +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAPRSRH*TPARVT
Trigger: TGTCACCCGGGCTGGAGTGCAGTGGCGTGATCTCGG...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGCACACCCACTGAACTaGGTAAGAGTGGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVAHPLN*VRVAWL
Trigger: CAGCCACGCCACTCTTACTCAGTTCAGTGGGTGTGC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTGTGGCGTGGCTGAGGTaGCGTCAGCAGCTGACTATG +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAVAWLR*RQQLTM
Trigger: CATAGTCAGCTGCTGACGGCACCTCAGCCACGCCAC...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGCTGAGGCAGGAGAACTaGTGGAACCCAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCELRQEN*WNPGGG
Trigger: TCCACCTCCTGGGTTCCAGCAGTTCTCCTGCCTCAG...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCGAGCACTTCGTCCTaGTCGTCCGTGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQPSTSS*SSVRSS
Trigger: GCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGG...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp AATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCGTCCTGGTCGTCCGTaGGGAGCAGCACCACGTTGG +
Preference number: 4 (lower is better)
Translates to: NTVRTKTSGVSLSAKGRDRPGRP*GAAPRW
Trigger: CCAACGTGGTGCTGCTCCTCACGGACGACCAGGACG...GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000543646.5
CDS-3UTR GCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCGAGATCACGCCACTaGACTCCAGCCCGGGTGACA +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLPRSRH*TPARVT
Trigger: TGTCACCCGGGCTGGAGTGCAGTGGCGTGATCTCGG...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTGGATACTGGCTCTGCTaGGGCAGCAGAGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAGYWLC*GSREHL
Trigger: CAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCC...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTTCCTGTCAGGATACTaGCTCTGCTGGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVFLSGY*LCWGSR
Trigger: TCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAA...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCCAGGGAAGGGCATGTTaGGTCAGTGACGTTACGGCC +
Preference number: 4 (lower is better)
Translates to: IPKIEERREGCTTSYHASQGRAC*VSDVTA
Trigger: GGCCGTAACGTCACTGACCCAACATGCCCTTCCCTG...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAACGTCCTGGTCGTCCGTaGGGAGCAGCACCACGTTGG +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKRPGRP*GAAPRW
Trigger: CCAACGTGGTGCTGCTCCTCACGGACGACCAGGACG...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCAAAGCCTTCTGGTACTaGGGTGCAGCTGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: IPKIEERREGCTTSYHASKAFWY*GAAVQG
Trigger: GCCTTGGACAGCTGCACCTCAGTACCAGAAGGCTTT...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCTTGTCTGATTTGGTTTaGTCCCAGGTCCTCGAACCA +
Preference number: 4 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVLSDLV*SQVLEP
Trigger: TGGTTCGAGGACCTGGGATCAAACCAAATCAGACAA...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTCTGCAGAGGCTGTGTaGGGTCGCTACAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVSAEAV*GRYRRC
Trigger: ACATCTTCTGTAGCGACCTCACACAGCCTCTGCAGA...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACAGGCGAAGGTTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: QRPQECPCQLKEETRDSHRRRLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAACCTTCGCCT...GTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGCTTCTGGTACTGAGGTaGAGCTGTCCAAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVLLVLR*SCPRRM
Trigger: CATTCGCCTTGGACAGCTGCACCTCAGTACCAGAAG...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCAAAAACCCCTGGAGTaGGACAGGTTGGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRQKPLE*DRLAQN
Trigger: GTTCTGGGCCAACCTGTCGCACTCCAGGGGTTTTTG...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACCATCAGAAAGAGGCGTaGAGGGATCCATCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QRPQECPCQLKEETRDSHHQKEA*RDPSAE
Trigger: CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATG...GTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGCTGAGGCAGGAGAACTaGTGGAACCCAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVLRQEN*WNPGGG
Trigger: TCCACCTCCTGGGTTCCAGCAGTTCTCCTGCCTCAG...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp AACAGAGCTTGGGTGACATGTTTTGAATTTGCAACCTTACCACACTGTGATGAAGGAGCAGCACCACGTTaGGCCTCCGGGTTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: NRAWVTCFEFATLPHCDEGAAPR*ASGFPQ
Trigger: CTGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCC...TTCATCACAGTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258145.8
CDS-3UTR CCA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGGGATACTGGCTCTGCTaGGGCAGCAGAGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVGYWLC*GSREHL
Trigger: CAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCC...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGTTCCTGTCAGGATACTaGCTCTGCTGGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAEFLSGY*LCWGSR
Trigger: TCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAA...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCCAGGGAAGGGCATGTTaGGTCAGTGACGTTACGGCC +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSIQGRAC*VSDVTA
Trigger: GGCCGTAACGTCACTGACCCAACATGCCCTTCCCTG...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGTTGAAGGCCGGTGGCTaGAGTCAGACGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAELKAGG*SQTFSP
Trigger: GGGAGAAAACGTCTGACTCCAGCCACCGGCCTTCAA...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGAGTGGCGATCATCATaGAGAAGGGCTCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVEWRSS*RRAQSW
Trigger: CCAACTTTGAGCCCTTCTTCATGATGATCGCCACTC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTTCTGCAGAGGCTGTGTaGGGTCGCTACAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVASAEAV*GRYRRC
Trigger: ACATCTTCTGTAGCGACCTCACACAGCCTCTGCAGA...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTAGGCGAAGGTTGCAGTaGGCTGAGATCATGCCATTG +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVARRRLQ*AEIMPL
Trigger: CAATGGCATGATCTCAGCTCACTGCAACCTTCGCCT...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp AAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGCACTCCAGCCCGGGTaGCAACCGCGAGACTTCATC +
Preference number: 4 (lower is better)
Translates to: KNTVRTKTSGVSLSAKGRALQPG*QPRDFI
Trigger: GATGAAGTCTCGCGGTTGTCACCCGGGCTGGAGTGC...TCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGAGGAATAAAAAGCCGTaGCTTGAAGGCCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRRNKKP*LEGRWL
Trigger: CAGCCACCGGCCTTCAAGGCACGGCTTTTTATTCCT...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTGCCAGGACTTACTACTaGAGTTCCCCTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAARTYY*SSPPEC
Trigger: ACACTCTGGAGGGGAACTGCAGTAGTAAGTCCTGGC...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGCTTCTGGTACTGAGGTaGAGCTGTCCAAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAELLVLR*SCPRRM
Trigger: CATTCGCCTTGGACAGCTGCACCTCAGTACCAGAAG...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp AATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACGTGGCGTGGCTGAGGTaGCGTCAGCAGCTGACTATG +
Preference number: 4 (lower is better)
Translates to: NTVRTKTSGVSLSAKGRDVAWLR*RQQLTM
Trigger: CATAGTCAGCTGCTGACGGCACCTCAGCCACGCCAC...GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGAGCGTAGAGAGGGCTaGACCACATCCTACCACGCA +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSERREG*TTSYHA
Trigger: TGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTC...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGAGGCGAATGAGGCGCTaGAGTGGCGATCATCATGAA +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRRRMRR*SGDHHE
Trigger: TTCATGATGATCGCCACTCCAGCGCCTCATTCGCCT...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTAGGCGAATGAGGCGCTaGAGTGGCGATCATCATGAA +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVARRMRR*SGDHHE
Trigger: TTCATGATGATCGCCACTCCAGCGCCTCATTCGCCT...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACGCCAGGTCAAGTTACTaGCACCTCTCAAAATGGGCA +
Preference number: 4 (lower is better)
Translates to: QRPQECPCQLKEETRDSHARSSY*HLSKWA
Trigger: TGCCCATTTTGAGAGGTGCCAGTAACTTGACCTGGC...GTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTCAGGGAAGGGCATGTTaGGTCAGTGACGTTACGGCC +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSQGRAC*VSDVTA
Trigger: GGCCGTAACGTCACTGACCCAACATGCCCTTCCCTG...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGTGGTTGGCAGCCACTaGAAAGTAGATGGCTATCAC +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVVVGSH*KVDGYH
Trigger: GTGATAGCCATCTACTTTCCAGTGGCTGCCAACCAC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTGAGTGGCGATCATCATaGAGAAGGGCTCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAEWRSS*RRAQSW
Trigger: CCAACTTTGAGCCCTTCTTCATGATGATCGCCACTC...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp AACAGAGCTTGGGTGACATGTTTTGAATTTGCAACCTTACCACACTGTGATGAAGCTGTCCAAGGCGAATaGGGCGCTGGAGTGGCGATC +
Preference number: 4 (lower is better)
Translates to: NRAWVTCFEFATLPHCDEAVQGE*GAGVAI
Trigger: GATCGCCACTCCAGCGCCTCATTCGCCTTGGACAGC...TTCATCACAGTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp TTAAAAGGAGGCAGCAAGCTTCTTGCAGTGGGTCCCTTAAACATTATGAAAACAGCTGTCCAAGGCGAATaGGGCGCTGGAGTGGCGATC +
Preference number: 4 (lower is better)
Translates to: LKGGSKLLAVGPLNIMKTAVQGE*GAGVAI
Trigger: GATCGCCACTCCAGCGCCTCATTCGCCTTGGACAGC...TGTTTTCATAATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCTCCTTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTAAAGCCTTCTGGTACTaGGGTGCAGCTGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSKAFWY*GAAVQG
Trigger: GCCTTGGACAGCTGCACCTCAGTACCAGAAGGCTTT...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTTGTCTGATTTGGTTTaGTCCCAGGTCCTCGAACCA +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVLSDLV*SQVLEP
Trigger: TGGTTCGAGGACCTGGGATCAAACCAAATCAGACAA...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTGGCATGTTGGGTCAGTaGCGTTACGGCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLGMLGQ*RYGLLL
Trigger: AAGGAGAAGGCCGTAACGTCACTGACCCAACATGCC...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGTTCCAGGTGTGGTCTTaGAGACTAGCTACAGACACC +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAEFQVWS*RLATDT
Trigger: GGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAA...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGCACGAGGAAGTCAGCTaGCTGGGTTGCTTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVHEEVS*LGCFFK
Trigger: TTTGAAAAAGCAACCCAGTCAGCTGACTTCCTCGTG...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGCATGGTTCTCTACTCTaGAGGGCACCAACATGGACC +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWHGSLL*RAPTWT
Trigger: GGTCCATGTTGGTGCCCTTCAGAGTAGAGAACCATG...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGAAAGGTGGATCACCTaGGGTCAGGAGTTAATCAGC +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAEERWIT*GQELIS
Trigger: GCTGATTAACTCCTGACCTCAGGTGATCCACCTTTC...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACAGTGGTAGAATATTCTaGAAAAGCCATGCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: QRPQECPCQLKEETRDSHSGRIF*KSHAAE
Trigger: CTCGGCGGCATGGCTTTTTCAGAATATTCTACCACT...GTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543646.5
CDS-3UTR GCA 90 bp ATGGGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCCAGGACTTACTACTaGAGTTCCCCTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: MGRVHSLTHCTRKSADWVARTYY*SSPPEC
Trigger: ACACTCTGGAGGGGAACTGCAGTAGTAAGTCCTGGC...AACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGGTTCTTGGATCTTCTaGCAGGACTTACTACTGCAG +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVGSWIF*QDLLLQ
Trigger: CTGCAGTAGTAAGTCCTGGCAGAAGATCCAAGAACC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCAAAAACCCCTGGAGTaGGACAGGTTGGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLQKPLE*DRLAQN
Trigger: GTTCTGGGCCAACCTGTCGCACTCCAGGGGTTTTTG...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CAAGAACTGTGGCCCCAGGATAAAAAGAATACAGTGAGAACAAAGACCTCAGGAGAGCGTAGAGAGGGCTaGACCACATCCTACCACGCA +
Preference number: 4 (lower is better)
Translates to: QELWPQDKKNTVRTKTSGERREG*TTSYHA
Trigger: TGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTC...TCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTGGGGCCACAGTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTTTCCTGTCAGGATACTaGCTCTGCTGGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSFLSGY*LCWGSR
Trigger: TCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAA...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGCGTGGCTGAGGTGCCGTCAGCAGCTGACTATGTCACTCTTATGAGTTCTGCTTGCTGGGAAAGTATTTaGTTCTTGGATCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GVAEVPSAADYVTLMSSACWESI*FLDLLP
Trigger: TGGCAGAAGATCCAAGAACCAAATACTTTCCCAGCA...AGCAGAACTCATAAGAGTGACATAGTCAGCTGCTGACGGCACCTCAGCCACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGAGGCGAATGAGGCGCTaGAGTGGCGATCATCATGAA +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWRRMRR*SGDHHE
Trigger: TTCATGATGATCGCCACTCCAGCGCCTCATTCGCCT...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGCTTGCTTGTCTGATTTaGTTTGATCCCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVLACLI*FDPRSS
Trigger: CGAGGACCTGGGATCAAACCAAATCAGACAAGCAAG...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCGCCAGGTCAAGTTACTaGCACCTCTCAAAATGGGCA +
Preference number: 4 (lower is better)
Translates to: IPKIEERREGCTTSYHASARSSY*HLSKWA
Trigger: TGCCCATTTTGAGAGGTGCCAGTAACTTGACCTGGC...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GGCGTGGCTGAGGTGCCGTCAGCAGCTGACTATGTCACTCTTATGAGTTCTGCTGTTAGTGATCTGGTCTaGGTCTGCAGTCAGATTATA +
Preference number: 4 (lower is better)
Translates to: GVAEVPSAADYVTLMSSAVSDLV*VCSQII
Trigger: TATAATCTGACTGCAGACCCAGACCAGATCACTAAC...AGCAGAACTCATAAGAGTGACATAGTCAGCTGCTGACGGCACCTCAGCCACGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp CAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACGCAATGTTAGTGATCTaGTCTGGGTCTGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: QRPQECPCQLKEETRDSHAMLVI*SGSAVR
Trigger: TCTGACTGCAGACCCAGACCAGATCACTAACATTGC...GTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGCAATGTTAGTGATCTaGTCTGGGTCTGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVAMLVI*SGSAVR
Trigger: TCTGACTGCAGACCCAGACCAGATCACTAACATTGC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGGTGGTTGGCAGCCACTaGAAAGTAGATGGCTATCAC +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRVVGSH*KVDGYH
Trigger: GTGATAGCCATCTACTTTCCAGTGGCTGCCAACCAC...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCGTAATCCCAGCACTTTaGGAGGCCGAGAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSIVIPAL*EAEKGG
Trigger: TCCACCTTTCTCGGCCTCCCAAAGTGCTGGGATTAC...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCAGCAGCAGAGAGCACTTaGCACATACATGCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSAAEST*HIHAAE
Trigger: CTCGGCGGCATGTATGTGCCAAGTGCTCTCTGCTGC...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS-3UTR TCA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCAACCACACATTGATCTaGGAATTGCTGGGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVNHTLI*ELLGKY
Trigger: ATACTTTCCCAGCAATTCTCAGATCAATGTGTGGTT...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCGAGTGGCGATCATCATaGAGAAGGGCTCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSIEWRSS*RRAQSW
Trigger: CCAACTTTGAGCCCTTCTTCATGATGATCGCCACTC...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGGAGTGGCGATCATCATaGAGAAGGGCTCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQEWRSS*RRAQSW
Trigger: CCAACTTTGAGCCCTTCTTCATGATGATCGCCACTC...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCAAAAGCCTTCTGGTACTaGGGTGCAGCTGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSKAFWY*GAAVQG
Trigger: GCCTTGGACAGCTGCACCTCAGTACCAGAAGGCTTT...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATAAAGCCTTCTGGTACTaGGGTGCAGCTGTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHKAFWY*GAAVQG
Trigger: GCCTTGGACAGCTGCACCTCAGTACCAGAAGGCTTT...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGCACAAGGTCATCAACTaGGAGGAGAGTTTGCCACCT +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWHKVIN*EESLPP
Trigger: AGGTGGCAAACTCTCCTCTCAGTTGATGACCTTGTG...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGTTGTCTGATTTGGTTTaGTCCCAGGTCCTCGAACCA +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRLSDLV*SQVLEP
Trigger: TGGTTCGAGGACCTGGGATCAAACCAAATCAGACAA...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTTCCACCAGGACATCTaGTCGCCAGGTCAAGTTACT +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSIFHQDI*SPGQVT
Trigger: AGTAACTTGACCTGGCGATCAGATGTCCTGGTGGAA...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATGGCATGTTGGGTCAGTaGCGTTACGGCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHGMLGQ*RYGLLL
Trigger: AAGGAGAAGGCCGTAACGTCACTGACCCAACATGCC...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCAAATTCCACAATGCTaGCATTGTCCTCACACAGGC +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRQIPQC*HCPHTG
Trigger: GCCTGTGTGAGGACAATGTCAGCATTGTGGAATTTG...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTCAAATTCCACAATGCTaGCATTGTCCTCACACAGGC +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAQIPQC*HCPHTG
Trigger: GCCTGTGTGAGGACAATGTCAGCATTGTGGAATTTG...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGTTCCAGGTGTGGTCTTaGAGACTAGCTACAGACACC +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWFQVWS*RLATDT
Trigger: GGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAA...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGCGTGGCTGAGGTGCCGTCAGCAGCTGACTATGTCACTCTTATGAGTTCTGCTTTGTTCTTACTTGGATaGTTCAGCTCTGATGGTTAC +
Preference number: 4 (lower is better)
Translates to: GVAEVPSAADYVTLMSSALFLLG*FSSDGY
Trigger: GTAACCATCAGAGCTGAATCATCCAAGTAAGAACAA...AGCAGAACTCATAAGAGTGACATAGTCAGCTGCTGACGGCACCTCAGCCACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCTTGTTCTTACTTGGATaGTTCAGCTCTGATGGTTAC +
Preference number: 4 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVLFLLG*FSSDGY
Trigger: GTAACCATCAGAGCTGAATCATCCAAGTAAGAACAA...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCACTGTTAGCCCAACATaGCTATCTGCAATTCTGATA +
Preference number: 4 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVTVSPT*LSAILI
Trigger: TATCAGAATTGCAGATAGTCATGTTGGGCTAACAGT...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGTTCCCTACTTTGCATaGGAGGGAGAGCTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAEVPYFA*EGELCN
Trigger: GTTACAAAGCTCTCCCTCTCATGCAAAGTAGGGAAC...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTAGGAATAAAAAGCCGTaGCTTGAAGGCCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLRNKKP*LEGRWL
Trigger: CAGCCACCGGCCTTCAAGGCACGGCTTTTTATTCCT...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTGCCAGGACTTACTACTaGAGTTCCCCTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLARTYY*SSPPEC
Trigger: ACACTCTGGAGGGGAACTGCAGTAGTAAGTCCTGGC...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCCAGGACTTACTACTaGAGTTCCCCTCCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSARTYY*SSPPEC
Trigger: ACACTCTGGAGGGGAACTGCAGTAGTAAGTCCTGGC...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGATCTGGTCTGGGTCTaGAGTCAGATTATAGACTTC +
Preference number: 4 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCEDLVWV*SQIIDF
Trigger: GAAGTCTATAATCTGACTGCAGACCCAGACCAGATC...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACAAAAACCCCTGGAGTaGGACAGGTTGGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSQKPLE*DRLAQN
Trigger: GTTCTGGGCCAACCTGTCGCACTCCAGGGGTTTTTG...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCTTATCACAAGCTTACTaGTCTATTTCAGTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVLSQAY*SISVQH
Trigger: GTGCTGCACTGAAATAGAGCAGTAAGCTTGTGATAA...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACCAGGAGGCGAAGGTTaGAGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSPGGEG*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAACCTTCGCCTCCTGG...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGATTCTGAAAAAGCCATaGCGCCGAGCACTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWILKKP*RRALRP
Trigger: AGGACGAAGTGCTCGGCGGCATGGCTTTTTCAGAAT...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543646.5
CDS-3UTR CCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTGCAGCAGAGAGCACTTaGCACATAAGCACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAAAEST*HISTGK
Trigger: TTTTCCAGTGCTTATGTGCCAAGTGCTCTCTGCTGC...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR CCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGGATACTGGCTCTGCTaGGGCAGCAGAGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKGYWLC*GSREHL
Trigger: CAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCC...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp TTCATTTTTCAGATCTCAGAGGGGAGTCTCAAGAGAAGGGACCTTGCCTTAATCTTCCTGTCAGGATACTaGCTCTGCTGGGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FIFQISEGSLKRRDLALIFLSGY*LCWGSR
Trigger: TCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAA...GATTAAGGCAAGGTCCCTTCTCTTGAGACTCCCCTCTGAGATCTGAAAAATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCAACGTGATGATTATGTaGGTACTTTCCTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVNVMIM*VLSCQD
Trigger: ATCCTGACAGGAAAGTACCCACATAATCATCACGTT...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGCGTGGCTGAGGTGCCGTCAGCAGCTGACTATGTCACTCTTATGAGTTCTGCTTCCTCGAACCAACAGTaGAACTTTGATATCAAACTC +
Preference number: 4 (lower is better)
Translates to: GVAEVPSAADYVTLMSSASSNQQ*NFDIKL
Trigger: GAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGA...AGCAGAACTCATAAGAGTGACATAGTCAGCTGCTGACGGCACCTCAGCCACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTTGCTTGTCTGATTTaGTTTGATCCCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRLACLI*FDPRSS
Trigger: CGAGGACCTGGGATCAAACCAAATCAGACAAGCAAG...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCGACCCAAGTCAATGTTaGCAACCAGCATCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: IPKIEERREGCTTSYHASDPSQC*QPASCL
Trigger: CAAGCAAGATGCTGGTTGCCAACATTGACTTGGGTC...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGTTACGGCCTTCTCCTTaGTATTCCACCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAELRPSP*YSTRTS
Trigger: AGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAA...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp AAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGACAGGGAAGGGCATGTTaGGTCAGTGACGTTACGGCC +
Preference number: 4 (lower is better)
Translates to: KNTVRTKTSGVSLSAKGRQGRAC*VSDVTA
Trigger: GGCCGTAACGTCACTGACCCAACATGCCCTTCCCTG...TCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTTCACATACACAGTCTaGGAAGCATTGAGATACGCC +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVFTYTV*EALRYA
Trigger: GGCGTATCTCAATGCTTCCCAGACTGTGTATGTGAA...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGTTCACATACACAGTCTaGGAAGCATTGAGATACGCC +
Preference number: 4 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCEFTYTV*EALRYA
Trigger: GGCGTATCTCAATGCTTCCCAGACTGTGTATGTGAA...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp TCAAGAGCTACCTGGAATTGGCCTTTATCACAAGCTTACTGCTCTATTTCAGTGATCAGCCAGGTGGGGTaGCAGGCGCCTGTAATCTCA +
Preference number: 4 (lower is better)
Translates to: SRATWNWPLSQAYCSISVISQVG*QAPVIS
Trigger: TGAGATTACAGGCGCCTGCCACCCCACCTGGCTGAT...CACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGTAATCCCAGCACTTTaGGAGGCCGAGAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSVIPAL*EAEKGG
Trigger: TCCACCTTTCTCGGCCTCCCAAAGTGCTGGGATTAC...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp GGTAAAACTCAAGAACCCAACTCTACCCATCTAATTCCATTGGTGGATCAGTTGGGCATGTTGGGTCAGTaGCGTTACGGCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GKTQEPNSTHLIPLVDQLGMLGQ*RYGLLL
Trigger: AAGGAGAAGGCCGTAACGTCACTGACCCAACATGCC...CAACTGATCCACCAATGGAATTAGATGGGTAGAGTTGGGTTCTTGAGTTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp TCTAAAACATTCACAGCAGAGGTGTCCATTTCACTTGCCTGTTTCACCTCTAGAGGCATGTTGGGTCAGTaGCGTTACGGCCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SKTFTAEVSISLACFTSRGMLGQ*RYGLLL
Trigger: AAGGAGAAGGCCGTAACGTCACTGACCCAACATGCC...TCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCAAATTCCACAATGCTaGCATTGTCCTCACACAGGC +
Preference number: 4 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQQIPQC*HCPHTG
Trigger: GCCTGTGTGAGGACAATGTCAGCATTGTGGAATTTG...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTTCTGCAGAGGCTGTGTaGGGTCGCTACAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLSAEAV*GRYRRC
Trigger: ACATCTTCTGTAGCGACCTCACACAGCCTCTGCAGA...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp TTCATTTTTCAGATCTCAGAGGGGAGTCTCAAGAGAAGGGACCTTGCCTTAATCTCTGCAGAGGCTGTGTaGGGTCGCTACAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: FIFQISEGSLKRRDLALISAEAV*GRYRRC
Trigger: ACATCTTCTGTAGCGACCTCACACAGCCTCTGCAGA...GATTAAGGCAAGGTCCCTTCTCTTGAGACTCCCCTCTGAGATCTGAAAAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCCACGAGGAAGTCAGCTaGCTGGGTTGCTTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSIHEEVS*LGCFFK
Trigger: TTTGAAAAAGCAACCCAGTCAGCTGACTTCCTCGTG...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGCTTATTGCCTGAGTTaGACAAGTTACAAACCACAG +
Preference number: 4 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCEAYCLS*TSYKPQ
Trigger: CTGTGGTTTGTAACTTGTTCAACTCAGGCAATAAGC...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGACTATGTCACTCTTATaGGTTCTGCTCAGGAACAAG +
Preference number: 4 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCETMSLL*VLLRNK
Trigger: CTTGTTCCTGAGCAGAACTCATAAGAGTGACATAGT...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCCATGGTTCTCTACTCTaGAGGGCACCAACATGGACC +
Preference number: 4 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACHGSLL*RAPTWT
Trigger: GGTCCATGTTGGTGCCCTTCAGAGTAGAGAACCATG...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTGAAAGGTGGATCACCTaGGGTCAGGAGTTAATCAGC +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLERWIT*GQELIS
Trigger: GCTGATTAACTCCTGACCTCAGGTGATCCACCTTTC...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATAGGAATAAAAAGCCGTaGCTTGAAGGCCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHRNKKP*LEGRWL
Trigger: CAGCCACCGGCCTTCAAGGCACGGCTTTTTATTCCT...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCTTCTGGTACTGAGGTaGAGCTGTCCAAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLLLVLR*SCPRRM
Trigger: CATTCGCCTTGGACAGCTGCACCTCAGTACCAGAAG...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTaGAGGGATCCATCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLHQKEA*RDPSAE
Trigger: CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATG...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCCATCAGAAAGAGGCGTaGAGGGATCCATCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACHQKEA*RDPSAE
Trigger: CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATG...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp AATACTGATAATCATACAAGACTCCAAAACTCAGGAAGAACCCATCTAAAAGGGCCGAGCACTTCGTCCTaGTCGTCCGTGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NTDNHTRLQNSGRTHLKGPSTSS*SSVRSS
Trigger: GCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGG...CCCTTTTAGATGGGTTCTTCCTGAGTTTTGGAGTCTTGTATGATTATCAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258145.8
CDS-3UTR CCA 90 bp CAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACTGCTGGGAAAGTATTTaGTTCTTGGATCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QRPQECPCQLKEETRDSHCWESI*FLDLLP
Trigger: TGGCAGAAGATCCAAGAACCAAATACTTTCCCAGCA...GTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGAGAAGGGCTCAAAGTTaGACTTGTAGTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCERRAQS*TCSPES
Trigger: ACTTTCTGGACTACAAGTCCAACTTTGAGCCCTTCT...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCGAAGTTCTTGTTTCTTaGTGCAAAGACATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVEVLVS*CKDILE
Trigger: TTCCAGAATGTCTTTGCACCAAGAAACAAGAACTTC...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGGACCCAAGTCAATGTTaGCAACCAGCATCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVDPSQC*QPASCL
Trigger: CAAGCAAGATGCTGGTTGCCAACATTGACTTGGGTC...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGTTAGTGATCTGGTCTaGGTCTGCAGTCAGATTATA +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVVSDLV*VCSQII
Trigger: TATAATCTGACTGCAGACCCAGACCAGATCACTAAC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp TCAAGAGCTACCTGGAATTGGCCTTTATCACAAGCTTACTGCTCTATTTCAGTGAACTGGCACTCCCTGTaGTTGGCAGCCACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SRATWNWPLSQAYCSISVNWHSL*LAATGK
Trigger: CTTTCCAGTGGCTGCCAACCACAGGGAGTGCCAGTT...CACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp TTAAAAGGAGGCAGCAAGCTTCTTGCAGTGGGTCCCTTAAACATTATGAAAACAATCAGCCAGGTGGGGTaGCAGGCGCCTGTAATCTCA +
Preference number: 4 (lower is better)
Translates to: LKGGSKLLAVGPLNIMKTISQVG*QAPVIS
Trigger: TGAGATTACAGGCGCCTGCCACCCCACCTGGCTGAT...TGTTTTCATAATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCTCCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGAACCACACATTGATCTaGGAATTGCTGGGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCENHTLI*ELLGKY
Trigger: ATACTTTCCCAGCAATTCTCAGATCAATGTGTGGTT...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCCACAAGGTCATCAACTaGGAGGAGAGTTTGCCACCT +
Preference number: 4 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACHKVIN*EESLPP
Trigger: AGGTGGCAAACTCTCCTCTCAGTTGATGACCTTGTG...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCACAAGGTCATCAACTaGGAGGAGAGTTTGCCACCT +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLHKVIN*EESLPP
Trigger: AGGTGGCAAACTCTCCTCTCAGTTGATGACCTTGTG...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGGTGATAGCCATTGTCTaGGGTATAGAAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVVIAIV*GIEDVS
Trigger: ACTTACATCTTCTATACCTCAGACAATGGCTATCAC...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGAGCATCTTGCTTGTCTaGTTTGGTTTGATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVSILLV*FGLIPG
Trigger: ACCTGGGATCAAACCAAATCAGACAAGCAAGATGCT...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGAGCATCTTGCTTGTCTaGTTTGGTTTGATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWSILLV*FGLIPG
Trigger: ACCTGGGATCAAACCAAATCAGACAAGCAAGATGCT...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCATTCCAGGTGTGGTCTTaGAGACTAGCTACAGACACC +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSFQVWS*RLATDT
Trigger: GGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAA...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATTTCCAGGTGTGGTCTTaGAGACTAGCTACAGACACC +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHFQVWS*RLATDT
Trigger: GGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAA...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp TCAAGAGCTACCTGGAATTGGCCTTTATCACAAGCTTACTGCTCTATTTCAGTGGGTGCCGTCAGCAGCTaGCTATGTCACTCTTATGAG +
Preference number: 4 (lower is better)
Translates to: SRATWNWPLSQAYCSISVGAVSS*LCHSYE
Trigger: CTCATAAGAGTGACATAGTCAGCTGCTGACGGCACC...CACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGATTGGAGTCTTGGCTTaGCTAATTAACCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAEIGVLA*LINQCL
Trigger: CAAGCACTGGTTAATTAGGCAAGCCAAGACTCCAAT...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGGATCTGGTCTGGGTCTaGAGTCAGATTATAGACTTC +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWDLVWV*SQIIDF
Trigger: GAAGTCTATAATCTGACTGCAGACCCAGACCAGATC...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCCACAGTTTAACACATTaGACGAGGAAGTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSIHSLTH*TRKSAD
Trigger: GTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTG...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGCACAGTTTAACACATTaGACGAGGAAGTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVHSLTH*TRKSAD
Trigger: GTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTG...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp ATGGGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTACTGCTCTATTTCAGTaGAGCACCAGCCTAGAATTC +
Preference number: 4 (lower is better)
Translates to: MGRVHSLTHCTRKSADWVTALFQ*STSLEF
Trigger: GAATTCTAGGCTGGTGCTGCACTGAAATAGAGCAGT...AACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp ATGCAGATAGAGCCAATGACTTCATACATGGAACTTAAATTCAAGCTCCCTGCTCCAGGAGGCGAAGGTTaGAGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: MQIEPMTSYMELKFKLPAPGGEG*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAACCTTCGCCTCCTGG...AGCAGGGAGCTTGAATTTAAGTTCCATGTATGAAGTCATTGGCTCTATCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTAGGTGTTCCCTACTTTaGATGAGAGGGAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSRCSLL*MRGRAL
Trigger: CAAAGCTCTCCCTCTCATGCAAAGTAGGGAACACCT...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGAACGTGATGATTATGTaGGTACTTTCCTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCENVMIM*VLSCQD
Trigger: ATCCTGACAGGAAAGTACCCACATAATCATCACGTT...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGAACGTGATGATTATGTaGGTACTTTCCTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVNVMIM*VLSCQD
Trigger: ATCCTGACAGGAAAGTACCCACATAATCATCACGTT...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGCTGTCTCTTGTCTATTaGCAAGGAAAACTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: HLLQSLHQKEACRDPSAELSLVY*QGKLSC
Trigger: ACAGGACAGTTTTCCTTGCCAATAGACAAGAGACAG...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTCTGTCTCTTGTCTATTaGCAAGGAAAACTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVALSLVY*QGKLSC
Trigger: ACAGGACAGTTTTCCTTGCCAATAGACAAGAGACAG...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGACCCAAGTCAATGTTaGCAACCAGCATCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSDPSQC*QPASCL
Trigger: CAAGCAAGATGCTGGTTGCCAACATTGACTTGGGTC...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATGCCAGGTCAAGTTACTaGCACCTCTCAAAATGGGCA +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHARSSY*HLSKWA
Trigger: TGCCCATTTTGAGAGGTGCCAGTAACTTGACCTGGC...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTTTACGGCCTTCTCCTTaGTATTCCACCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLLRPSP*YSTRTS
Trigger: AGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAA...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGTCTACAAACACCTCCTaGTCATCAAACTCGCAATAC +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRSTNTS*SSNSQY
Trigger: GTATTGCGAGTTTGATGACCAGGAGGTGTTTGTAGA...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTGTTAGTGATCTGGTCTaGGTCTGCAGTCAGATTATA +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAVSDLV*VCSQII
Trigger: TATAATCTGACTGCAGACCCAGACCAGATCACTAAC...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCAGGAAGTCAGCTGACTaGGTTGCTTTTTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSIRKSAD*VAFSNR
Trigger: CCTGTTTGAAAAAGCAACCCAGTCAGCTGACTTCCT...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTCCTTCAAGAGCTACCTaGAATTGGCCTTTATCACAA +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAPSRAT*NWPLSQ
Trigger: TTGTGATAAAGGCCAATTCCAGGTAGCTCTTGAAGG...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACTGGAAAGTAGATaGCTATCACCTTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQPLESR*LSPSRA
Trigger: AGCTCTTGAAGGTGATAGCCATCTACTTTCCAGTGG...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CAA 72 bp AAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTaGTCAGCTAAAGGAAGAGACCAGAGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: KNTVRTKTSGVS*SAKGRDQRQPL
Trigger: GAGTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR TCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAACACAAGGTCATCAACTaGGAGGAGAGTTTGCCACCT +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKHKVIN*EESLPP
Trigger: AGGTGGCAAACTCTCCTCTCAGTTGATGACCTTGTG...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCGTGATAGCCATTGTCTaGGGTATAGAAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: IPKIEERREGCTTSYHASVIAIV*GIEDVS
Trigger: ACTTACATCTTCTATACCTCAGACAATGGCTATCAC...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTAGCATCTTGCTTGTCTaGTTTGGTTTGATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSSILLV*FGLIPG
Trigger: ACCTGGGATCAAACCAAATCAGACAAGCAAGATGCT...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCAAATTCCACAATGCTaGCATTGTCCTCACACAGGC +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLQIPQC*HCPHTG
Trigger: GCCTGTGTGAGGACAATGTCAGCATTGTGGAATTTG...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGATAAAAAGAATACAGTaGGAACAAAGACCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVIKRIQ*EQRPQE
Trigger: CTCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTAT...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR TCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGTTGCTGGGGTCATGTaGGGTAAAGGAATATATCCA +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSVAGVM*GKGIYP
Trigger: TGGATATATTCCTTTACCTCACATGACCCCAGCAAC...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CAAACTCTCTATTCATTCCTAAGGCCTCTGTTCATTCCTAATGTTTACATGGTTGCACACCCACTGAACTaGGTAAGAGTGGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QTLYSFLRPLFIPNVYMVAHPLN*VRVAWL
Trigger: CAGCCACGCCACTCTTACTCAGTTCAGTGGGTGTGC...AACCATGTAAACATTAGGAATGAACAGAGGCCTTAGGAATGAATAGAGAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp ACTATCTGCAATTCTGATAGAAAAGCTACTTTCAGCCATGTCTTACAAAGTGCTTCAGGATACTGGCTCTaGTGGGGCAGCAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TICNSDRKATFSHVLQSASGYWL*WGSREH
Trigger: GTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGA...AGCACTTTGTAAGACATGGCTGAAAGTAGCTTTTCTATCAGAATTGCAGATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CAAACTCTCTATTCATTCCTAAGGCCTCTGTTCATTCCTAATGTTTACATGGTTTCAGGATACTGGCTCTaGTGGGGCAGCAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: QTLYSFLRPLFIPNVYMVSGYWL*WGSREH
Trigger: GTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGA...AACCATGTAAACATTAGGAATGAACAGAGGCCTTAGGAATGAATAGAGAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATGGTTCTTGGATCTTCTaGCAGGACTTACTACTGCAG +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHGSWIF*QDLLLQ
Trigger: CTGCAGTAGTAAGTCCTGGCAGAAGATCCAAGAACC...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp ATGCAGATAGAGCCAATGACTTCATACATGGAACTTAAATTCAAGCTCCCTGCTCTTCTGGTACTGAGGTaGAGCTGTCCAAGGCGAATG +
Preference number: 4 (lower is better)
Translates to: MQIEPMTSYMELKFKLPALLVLR*SCPRRM
Trigger: CATTCGCCTTGGACAGCTGCACCTCAGTACCAGAAG...AGCAGGGAGCTTGAATTTAAGTTCCATGTATGAAGTCATTGGCTCTATCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGATTGGAGTCTTGGCTTaGCTAATTAACCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQIGVLA*LINQCL
Trigger: CAAGCACTGGTTAATTAGGCAAGCCAAGACTCCAAT...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGATTGGAGTCTTGGCTTaGCTAATTAACCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWIGVLA*LINQCL
Trigger: CAAGCACTGGTTAATTAGGCAAGCCAAGACTCCAAT...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGTCAAACTCGCAATACTaGAAATTCCACAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRSNSQY*KFHNAD
Trigger: GTCAGCATTGTGGAATTTGCAGTATTGCGAGTTTGA...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGGTGCTCAATCTGAAATaGTACACAGGTCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVVLNLK*YTGPLT
Trigger: AGTCAAAGGACCTGTGTAGCATTTCAGATTGAGCAC...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTACTGCTCTATTTCAGTaGAGCACCAGCCTAGAATTC +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSTALFQ*STSLEF
Trigger: GAATTCTAGGCTGGTGCTGCACTGAAATAGAGCAGT...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGTTATCACAAGCTTACTaGTCTATTTCAGTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRLSQAY*SISVQH
Trigger: GTGCTGCACTGAAATAGAGCAGTAAGCTTGTGATAA...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTCAAGAGAAGGGACCTTaGCTTAATCCTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSQEKGP*LNPSSV
Trigger: AACACTGGAAGGATTAAGGCAAGGTCCCTTCTCTTG...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATAGGCAGCAAGCTTCTTaGAGTGGGTCCCTTAAACAT +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHRQQAS*SGSLKH
Trigger: ATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCT...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp TTCATTTTTCAGATCTCAGAGGGGAGTCTCAAGAGAAGGGACCTTGCCTTAATCAGGTGTTCCCTACTTTaGATGAGAGGGAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FIFQISEGSLKRRDLALIRCSLL*MRGRAL
Trigger: CAAAGCTCTCCCTCTCATGCAAAGTAGGGAACACCT...GATTAAGGCAAGGTCCCTTCTCTTGAGACTCCCCTCTGAGATCTGAAAAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp AATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACGCAGCAGAGAGCACTTaGCACATAAGCACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: NTVRTKTSGVSLSAKGRDAAEST*HISTGK
Trigger: TTTTCCAGTGCTTATGTGCCAAGTGCTCTCTGCTGC...GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR CCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGTGCTGGGAAAGTATTTaGTTCTTGGATCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWCWESI*FLDLLP
Trigger: TGGCAGAAGATCCAAGAACCAAATACTTTCCCAGCA...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCTGGGAAAGTATTTaGTTCTTGGATCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSICWESI*FLDLLP
Trigger: TGGCAGAAGATCCAAGAACCAAATACTTTCCCAGCA...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGAGAAGGGCTCAAAGTTaGACTTGTAGTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWRRAQS*TCSPES
Trigger: ACTTTCTGGACTACAAGTCCAACTTTGAGCCCTTCT...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGAGAAGGGCTCAAAGTTaGACTTGTAGTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQRRAQS*TCSPES
Trigger: ACTTTCTGGACTACAAGTCCAACTTTGAGCCCTTCT...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CAAGAACTGTGGCCCCAGGATAAAAAGAATACAGTGAGAACAAAGACCTCAGGACTTGCTTGTCTGATTTaGTTTGATCCCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QELWPQDKKNTVRTKTSGLACLI*FDPRSS
Trigger: CGAGGACCTGGGATCAAACCAAATCAGACAAGCAAG...TCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTGGGGCCACAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATGACCCAAGTCAATGTTaGCAACCAGCATCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHDPSQC*QPASCL
Trigger: CAAGCAAGATGCTGGTTGCCAACATTGACTTGGGTC...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTTGGCACCTCTCAAAATaGGCAATAAGGACATCCCAT +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSWHLSK*AIRTSH
Trigger: ATGGGATGTCCTTATTGCCCATTTTGAGAGGTGCCA...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTTGGCACCTCTCAAAATaGGCAATAAGGACATCCCAT +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLWHLSK*AIRTSH
Trigger: ATGGGATGTCCTTATTGCCCATTTTGAGAGGTGCCA...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGCCAGGTCAAGTTACTaGCACCTCTCAAAATGGGCA +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKARSSY*HLSKWA
Trigger: TGCCCATTTTGAGAGGTGCCAGTAACTTGACCTGGC...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTTTACGGCCTTCTCCTTaGTATTCCACCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLLRPSP*YSTRTS
Trigger: AGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAA...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGTCTACAAACACCTCCTaGTCATCAAACTCGCAATAC +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWSTNTS*SSNSQY
Trigger: GTATTGCGAGTTTGATGACCAGGAGGTGTTTGTAGA...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCGTTAGTGATCTGGTCTaGGTCTGCAGTCAGATTATA +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSIVSDLV*VCSQII
Trigger: TATAATCTGACTGCAGACCCAGACCAGATCACTAAC...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATGCAATGTTAGTGATCTaGTCTGGGTCTGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHAMLVI*SGSAVR
Trigger: TCTGACTGCAGACCCAGACCAGATCACTAACATTGC...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCAGCAATGTTAGTGATCTaGTCTGGGTCTGCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSAMLVI*SGSAVR
Trigger: TCTGACTGCAGACCCAGACCAGATCACTAACATTGC...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTAGGAAGTCAGCTGACTaGGTTGCTTTTTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSRKSAD*VAFSNR
Trigger: CCTGTTTGAAAAAGCAACCCAGTCAGCTGACTTCCT...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp AATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACATTCAAGCTCCCTGCTaGACAGGCACTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NTVRTKTSGVSLSAKGRDIQAPC*TGTSFL
Trigger: AAGGAAAGAAGTGCCTGTCCAGCAGGGAGCTTGAAT...GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGTTCCTAATGTTTACATaGTTCTCTACTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRFLMFT*FSTLKG
Trigger: GCCCTTCAGAGTAGAGAACCATGTAAACATTAGGAA...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CAA 72 bp CTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGTCTaGAAGACTAGCTACAGACACCTACTACAATCACTT +
Preference number: 4 (lower is better)
Translates to: LKASPETLPGVV*KTSYRHLLQSL
Trigger: AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCATCCCCATCTCTCCGATaGGAGCTTTGGTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSSPSLR*ELWFSL
Trigger: TAAAGAAAACCAAAGCTCTCATCGGAGAGATGGGGA...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR TCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGAACCACACATTGATCTaGGAATTGCTGGGAAAGTAT +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWNHTLI*ELLGKY
Trigger: ATACTTTCCCAGCAATTCTCAGATCAATGTGTGGTT...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGCCAACAGTGGAACTTTaGTATCAAACTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWPTVEL*YQTHTA
Trigger: AGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGG...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATAGCATCTTGCTTGTCTaGTTTGGTTTGATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHSILLV*FGLIPG
Trigger: ACCTGGGATCAAACCAAATCAGACAAGCAAGATGCT...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp TCTAAAACATTCACAGCAGAGGTGTCCATTTCACTTGCCTGTTTCACCTCTAGACACGAGGAAGTCAGCTaGCTGGGTTGCTTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SKTFTAEVSISLACFTSRHEEVS*LGCFFK
Trigger: TTTGAAAAAGCAACCCAGTCAGCTGACTTCCTCGTG...TCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGACTGTTAGCCCAACATaGCTATCTGCAATTCTGATA +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWTVSPT*LSAILI
Trigger: TATCAGAATTGCAGATAGTCATGTTGGGCTAACAGT...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGAGGAATATATCCAATTaGCTGTTAGCCCAACATGAC +
Preference number: 4 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVRNISN*LLAQHD
Trigger: GTCATGTTGGGCTAACAGTCAATTGGATATATTCCT...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp TCTAAAACATTCACAGCAGAGGTGTCCATTTCACTTGCCTGTTTCACCTCTAGAGTTCCCTACTTTGCATaGGAGGGAGAGCTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: SKTFTAEVSISLACFTSRVPYFA*EGELCN
Trigger: GTTACAAAGCTCTCCCTCTCATGCAAAGTAGGGAAC...TCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp GGTAAAACTCAAGAACCCAACTCTACCCATCTAATTCCATTGGTGGATCAGTTGGGTTCTTGGATCTTCTaGCAGGACTTACTACTGCAG +
Preference number: 4 (lower is better)
Translates to: GKTQEPNSTHLIPLVDQLGSWIF*QDLLLQ
Trigger: CTGCAGTAGTAAGTCCTGGCAGAAGATCCAAGAACC...CAACTGATCCACCAATGGAATTAGATGGGTAGAGTTGGGTTCTTGAGTTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCACAGTTTAACACATTaGACGAGGAAGTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLHSLTH*TRKSAD
Trigger: GTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTG...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAAGAGAAGGGACCTTaGCTTAATCCTTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHQEKGP*LNPSSV
Trigger: AACACTGGAAGGATTAAGGCAAGGTCCCTTCTCTTG...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCCCATGTCTTACAAAGTaGTTAAAGCTGGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: LQTPTTITSSERGVQGSIPCLTK*LKLDRR
Trigger: TCTTCTGTCCAGCTTTAAGCACTTTGTAAGACATGG...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTCACTCTTATGAGTTCTaGTCAGGAACAAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAHSYEF*SGTSIK
Trigger: TTTTATGCTTGTTCCTGAGCAGAACTCATAAGAGTG...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAAGGCAGCAAGCTTCTTaGAGTGGGTCCCTTAAACAT +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKRQQAS*SGSLKH
Trigger: ATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCT...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCAAAGTATTTGGTTCTTaGATCTTCTGCCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: IPKIEERREGCTTSYHASKVFGS*IFCQDL
Trigger: TAAGTCCTGGCAGAAGATCCAAGAACCAAATACTTT...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCGAAGTTCTTGTTTCTTaGTGCAAAGACATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: IPKIEERREGCTTSYHASEVLVS*CKDILE
Trigger: TTCCAGAATGTCTTTGCACCAAGAAACAAGAACTTC...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGGAAGTTCTTGTTTCTTaGTGCAAAGACATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQREVLVS*CKDILE
Trigger: TTCCAGAATGTCTTTGCACCAAGAAACAAGAACTTC...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp AAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGACTTGCTTGTCTGATTTaGTTTGATCCCAGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KNTVRTKTSGVSLSAKGRLACLI*FDPRSS
Trigger: CGAGGACCTGGGATCAAACCAAATCAGACAAGCAAG...TCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR CCA 90 bp AAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGATTACGGCCTTCTCCTTaGTATTCCACCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: KNTVRTKTSGVSLSAKGRLRPSP*YSTRTS
Trigger: AGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAA...TCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR CCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCATTCACATACACAGTCTaGGAAGCATTGAGATACGCC +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSFTYTV*EALRYA
Trigger: GGCGTATCTCAATGCTTCCCAGACTGTGTATGTGAA...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCAAGGAAGTCAGCTGACTaGGTTGCTTTTTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSRKSAD*VAFSNR
Trigger: CCTGTTTGAAAAAGCAACCCAGTCAGCTGACTTCCT...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTAGGAAGTCAGCTGACTaGGTTGCTTTTTCAAACAGG +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLRKSAD*VAFSNR
Trigger: CCTGTTTGAAAAAGCAACCCAGTCAGCTGACTTCCT...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp ACTATCTGCAATTCTGATAGAAAAGCTACTTTCAGCCATGTCTTACAAAGTGCTAACTGGCACTCCCTGTaGTTGGCAGCCACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TICNSDRKATFSHVLQSANWHSL*LAATGK
Trigger: CTTTCCAGTGGCTGCCAACCACAGGGAGTGCCAGTT...AGCACTTTGTAAGACATGGCTGAAAGTAGCTTTTCTATCAGAATTGCAGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCACCTTCACCAACTCTTaGCAGTTCTTCACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACTFTNS*QFFTAD
Trigger: ATCAGCAGTGAAGAACTGCCAAGAGTTGGTGAAGGT...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp TCTAAAACATTCACAGCAGAGGTGTCCATTTCACTTGCCTGTTTCACCTCTAGAATTCAAGCTCCCTGCTaGACAGGCACTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SKTFTAEVSISLACFTSRIQAPC*TGTSFL
Trigger: AAGGAAAGAAGTGCCTGTCCAGCAGGGAGCTTGAAT...TCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGTTCCTAATGTTTACATaGTTCTCTACTCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWFLMFT*FSTLKG
Trigger: GCCCTTCAGAGTAGAGAACCATGTAAACATTAGGAA...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CAA 72 bp TCTCTAAAACATTCACAGCAGAGGTGTCCATTTCACTaGCCTGTTTCACCTCTAGATACCACCACAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SLKHSQQRCPFH*PVSPLDTTTVA
Trigger: AGCAACTGTGGTGGTATCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp TCAAGAGCTACCTGGAATTGGCCTTTATCACAAGCTTACTGCTCTATTTCAGTGTCCCCATCTCTCCGATaGGAGCTTTGGTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SRATWNWPLSQAYCSISVSPSLR*ELWFSL
Trigger: TAAAGAAAACCAAAGCTCTCATCGGAGAGATGGGGA...CACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp AAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGATCCCCATCTCTCCGATaGGAGCTTTGGTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KNTVRTKTSGVSLSAKGRSPSLR*ELWFSL
Trigger: TAAAGAAAACCAAAGCTCTCATCGGAGAGATGGGGA...TCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR TCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTGTGATAGCCATTGTCTaGGGTATAGAAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLVIAIV*GIEDVS
Trigger: ACTTACATCTTCTATACCTCAGACAATGGCTATCAC...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp AACAGAGCTTGGGTGACATGTTTTGAATTTGCAACCTTACCACACTGTGATGAATTGTCTGATTTGGTTTaGTCCCAGGTCCTCGAACCA +
Preference number: 4 (lower is better)
Translates to: NRAWVTCFEFATLPHCDELSDLV*SQVLEP
Trigger: TGGTTCGAGGACCTGGGATCAAACCAAATCAGACAA...TTCATCACAGTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGGTACTGCCATTTATCTaGATGGGTTTACAAATTCAG +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWVLPFI*MGLQIQ
Trigger: CTGAATTTGTAAACCCATTCAGATAAATGGCAGTAC...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCGCTTATTGCCTGAGTTaGACAAGTTACAAACCACAG +
Preference number: 4 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACAYCLS*TSYKPQ
Trigger: CTGTGGTTTGTAACTTGTTCAACTCAGGCAATAAGC...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp AATACTGATAATCATACAAGACTCCAAAACTCAGGAAGAACCCATCTAAAAGGGGGTGCCGTCAGCAGCTaGCTATGTCACTCTTATGAG +
Preference number: 4 (lower is better)
Translates to: NTDNHTRLQNSGRTHLKGGAVSS*LCHSYE
Trigger: CTCATAAGAGTGACATAGTCAGCTGCTGACGGCACC...CCCTTTTAGATGGGTTCTTCCTGAGTTTTGGAGTCTTGTATGATTATCAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCATGCCTAATTAACCAGTaGTTGTTCGTTCCATGGATG +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSCLINQ*LFVPWM
Trigger: CATCCATGGAACGAACAAGCACTGGTTAATTAGGCA...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCTGCCTAATTAACCAGTaGTTGTTCGTTCCATGGATG +
Preference number: 4 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACCLINQ*LFVPWM
Trigger: CATCCATGGAACGAACAAGCACTGGTTAATTAGGCA...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATTGCCTAATTAACCAGTaGTTGTTCGTTCCATGGATG +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHCLINQ*LFVPWM
Trigger: CATCCATGGAACGAACAAGCACTGGTTAATTAGGCA...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTTGCCTAATTAACCAGTaGTTGTTCGTTCCATGGATG +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLCLINQ*LFVPWM
Trigger: CATCCATGGAACGAACAAGCACTGGTTAATTAGGCA...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATATTGGAGTCTTGGCTTaGCTAATTAACCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHIGVLA*LINQCL
Trigger: CAAGCACTGGTTAATTAGGCAAGCCAAGACTCCAAT...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGATCTGGTCTGGGTCTaGAGTCAGATTATAGACTTC +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKDLVWV*SQIIDF
Trigger: GAAGTCTATAATCTGACTGCAGACCCAGACCAGATC...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp AAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGATCTGGTCTGGGTCTaGAGTCAGATTATAGACTTC +
Preference number: 4 (lower is better)
Translates to: KNTVRTKTSGVSLSAKGRDLVWV*SQIIDF
Trigger: GAAGTCTATAATCTGACTGCAGACCCAGACCAGATC...TCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR GCA 90 bp AATACTGATAATCATACAAGACTCCAAAACTCAGGAAGAACCCATCTAAAAGGGCATCAGAAAGAGGCGTaGAGGGATCCATCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NTDNHTRLQNSGRTHLKGHQKEA*RDPSAE
Trigger: CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATG...CCCTTTTAGATGGGTTCTTCCTGAGTTTTGGAGTCTTGTATGATTATCAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGCCCAACATGACTATCTaGAATTCTGATAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWPNMTI*NSDRKA
Trigger: AGCTTTTCTATCAGAATTGCAGATAGTCATGTTGGG...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGTGTCAAATTCAAAGATaGTCAAAAGGTGTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQCQIQR*SKGVPY
Trigger: GTAGGGAACACCTTTTGAGCATCTTTGAATTTGACA...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp ATGCAGATAGAGCCAATGACTTCATACATGGAACTTAAATTCAAGCTCCCTGCTGCAGCAGAGAGCACTTaGCACATAAGCACTGGAAAA +
Preference number: 4 (lower is better)
Translates to: MQIEPMTSYMELKFKLPAAAEST*HISTGK
Trigger: TTTTCCAGTGCTTATGTGCCAAGTGCTCTCTGCTGC...AGCAGGGAGCTTGAATTTAAGTTCCATGTATGAAGTCATTGGCTCTATCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGAAAGTATTTGGTTCTTaGATCTTCTGCCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVKVFGS*IFCQDL
Trigger: TAAGTCCTGGCAGAAGATCCAAGAACCAAATACTTT...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGGAAGTTCTTGTTTCTTaGTGCAAAGACATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQEVLVS*CKDILE
Trigger: TTCCAGAATGTCTTTGCACCAAGAAACAAGAACTTC...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CAAGAACTGTGGCCCCAGGATAAAAAGAATACAGTGAGAACAAAGACCTCAGGACTGTCTCTTGTCTATTaGCAAGGAAAACTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: QELWPQDKKNTVRTKTSGLSLVY*QGKLSC
Trigger: ACAGGACAGTTTTCCTTGCCAATAGACAAGAGACAG...TCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTGGGGCCACAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCCTGTCTCTTGTCTATTaGCAAGGAAAACTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACLSLVY*QGKLSC
Trigger: ACAGGACAGTTTTCCTTGCCAATAGACAAGAGACAG...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTTCCTCGAACCAACAGTaGAACTTTGATATCAAACTC +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLSSNQQ*NFDIKL
Trigger: GAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGA...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGTAAAACTCAAGAACCCAACTCTACCCATCTAATTCCATTGGTGGATCAGTTGTGGCACCTCTCAAAATaGGCAATAAGGACATCCCAT +
Preference number: 4 (lower is better)
Translates to: GKTQEPNSTHLIPLVDQLWHLSK*AIRTSH
Trigger: ATGGGATGTCCTTATTGCCCATTTTGAGAGGTGCCA...CAACTGATCCACCAATGGAATTAGATGGGTAGAGTTGGGTTCTTGAGTTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAATGGCACCTCTCAAAATaGGCAATAAGGACATCCCAT +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKWHLSK*AIRTSH
Trigger: ATGGGATGTCCTTATTGCCCATTTTGAGAGGTGCCA...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp TCAAGAGCTACCTGGAATTGGCCTTTATCACAAGCTTACTGCTCTATTTCAGTGTTCACATACACAGTCTaGGAAGCATTGAGATACGCC +
Preference number: 4 (lower is better)
Translates to: SRATWNWPLSQAYCSISVFTYTV*EALRYA
Trigger: GGCGTATCTCAATGCTTCCCAGACTGTGTATGTGAA...CACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp CAAGAACTGTGGCCCCAGGATAAAAAGAATACAGTGAGAACAAAGACCTCAGGATCTACAAACACCTCCTaGTCATCAAACTCGCAATAC +
Preference number: 4 (lower is better)
Translates to: QELWPQDKKNTVRTKTSGSTNTS*SSNSQY
Trigger: GTATTGCGAGTTTGATGACCAGGAGGTGTTTGTAGA...TCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTGGGGCCACAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTTCTACAAACACCTCCTaGTCATCAAACTCGCAATAC +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLSTNTS*SSNSQY
Trigger: GTATTGCGAGTTTGATGACCAGGAGGTGTTTGTAGA...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTAATAATCAAGAACTGTaGCCCCAGGATAAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: GRVHSLTHCTRKSADWVANNQEL*PQDKKN
Trigger: ATTCTTTTTATCCTGGGGCCACAGTTCTTGATTATT...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCCTTCAAGAGCTACCTaGAATTGGCCTTTATCACAA +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLPSRAT*NWPLSQ
Trigger: TTGTGATAAAGGCCAATTCCAGGTAGCTCTTGAAGG...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAACCTTCACCAACTCTTaGCAGTTCTTCACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKTFTNS*QFFTAD
Trigger: ATCAGCAGTGAAGAACTGCCAAGAGTTGGTGAAGGT...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTGTGATAGCCATTGTCTaGGGTATAGAAGATGTAAGT +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLVIAIV*GIEDVS
Trigger: ACTTACATCTTCTATACCTCAGACAATGGCTATCAC...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp AATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCCAACAGTGGAACTTTaGTATCAAACTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: NTVRTKTSGVSLSAKGRDPTVEL*YQTHTA
Trigger: AGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGG...GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR TCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCCAACAGTGGAACTTTaGTATCAAACTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHPTVEL*YQTHTA
Trigger: AGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGG...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp ACTATCTGCAATTCTGATAGAAAAGCTACTTTCAGCCATGTCTTACAAAGTGCTTTCCACCAGGACATCTaGTCGCCAGGTCAAGTTACT +
Preference number: 4 (lower is better)
Translates to: TICNSDRKATFSHVLQSAFHQDI*SPGQVT
Trigger: AGTAACTTGACCTGGCGATCAGATGTCCTGGTGGAA...AGCACTTTGTAAGACATGGCTGAAAGTAGCTTTTCTATCAGAATTGCAGATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp AATACTGATAATCATACAAGACTCCAAAACTCAGGAAGAACCCATCTAAAAGGGTTCCACCAGGACATCTaGTCGCCAGGTCAAGTTACT +
Preference number: 4 (lower is better)
Translates to: NTDNHTRLQNSGRTHLKGFHQDI*SPGQVT
Trigger: AGTAACTTGACCTGGCGATCAGATGTCCTGGTGGAA...CCCTTTTAGATGGGTTCTTCCTGAGTTTTGGAGTCTTGTATGATTATCAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTATAAAAAGAATACAGTaGGAACAAAGACCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QLTGLLFQTGLKASPETLIKRIQ*EQRPQE
Trigger: CTCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTAT...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR TCA 90 bp AATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACTTGGGTGACATGTTTTaGATTTGCAACCTTACCACA +
Preference number: 4 (lower is better)
Translates to: NTVRTKTSGVSLSAKGRDLGDMF*ICNLTT
Trigger: TGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAA...GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATAGGAATATATCCAATTaGCTGTTAGCCCAACATGAC +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHRNISN*LLAQHD
Trigger: GTCATGTTGGGCTAACAGTCAATTGGATATATTCCT...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp ATGCAGATAGAGCCAATGACTTCATACATGGAACTTAAATTCAAGCTCCCTGCTGTTGCTGGGGTCATGTaGGGTAAAGGAATATATCCA +
Preference number: 4 (lower is better)
Translates to: MQIEPMTSYMELKFKLPAVAGVM*GKGIYP
Trigger: TGGATATATTCCTTTACCTCACATGACCCCAGCAAC...AGCAGGGAGCTTGAATTTAAGTTCCATGTATGAAGTCATTGGCTCTATCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp TTCATTTTTCAGATCTCAGAGGGGAGTCTCAAGAGAAGGGACCTTGCCTTAATCTCAAACTCGCAATACTaGAAATTCCACAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: FIFQISEGSLKRRDLALISNSQY*KFHNAD
Trigger: GTCAGCATTGTGGAATTTGCAGTATTGCGAGTTTGA...GATTAAGGCAAGGTCCCTTCTCTTGAGACTCCCCTCTGAGATCTGAAAAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCATCAAACTCGCAATACTaGAAATTCCACAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSSNSQY*KFHNAD
Trigger: GTCAGCATTGTGGAATTTGCAGTATTGCGAGTTTGA...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR GCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGTGCTCAATCTGAAATaGTACACAGGTCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKVLNLK*YTGPLT
Trigger: AGTCAAAGGACCTGTGTAGCATTTCAGATTGAGCAC...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CAAGAACTGTGGCCCCAGGATAAAAAGAATACAGTGAGAACAAAGACCTCAGGACCATGTCTTACAAAGTaGTTAAAGCTGGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: QELWPQDKKNTVRTKTSGPCLTK*LKLDRR
Trigger: TCTTCTGTCCAGCTTTAAGCACTTTGTAAGACATGG...TCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTGGGGCCACAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCAAACGTGATGATTATGTaGGTACTTTCCTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSNVMIM*VLSCQD
Trigger: ATCCTGACAGGAAAGTACCCACATAATCATCACGTT...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp TCAAGAGCTACCTGGAATTGGCCTTTATCACAAGCTTACTGCTCTATTTCAGTGAGAAGGGCTCAAAGTTaGACTTGTAGTCCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SRATWNWPLSQAYCSISVRRAQS*TCSPES
Trigger: ACTTTCTGGACTACAAGTCCAACTTTGAGCCCTTCT...CACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGAACATGAACAGAGCTTaGGTGACATGTTTTGAATTT +
Preference number: 4 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQNMNRA*VTCFEF
Trigger: AAATTCAAAACATGTCACCCAAGCTCTGTTCATGTT...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp AACAGAGCTTGGGTGACATGTTTTGAATTTGCAACCTTACCACACTGTGATGAACCACTGGAAAGTAGATaGCTATCACCTTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: NRAWVTCFEFATLPHCDEPLESR*LSPSRA
Trigger: AGCTCTTGAAGGTGATAGCCATCTACTTTCCAGTGG...TTCATCACAGTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp TTAAAAGGAGGCAGCAAGCTTCTTGCAGTGGGTCCCTTAAACATTATGAAAACATCTTTCCTTTATCCCTaGTACAGCCCTTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: LKGGSKLLAVGPLNIMKTSFLYP*YSPSTC
Trigger: ACAAGTGGAAGGGCTGTACCAGGGATAAAGGAAAGA...TGTTTTCATAATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCTCCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAACCAACAGTGGAACTTTaGTATCAAACTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKPTVEL*YQTHTA
Trigger: AGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGG...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR TCA 90 bp CAAGAACTGTGGCCCCAGGATAAAAAGAATACAGTGAGAACAAAGACCTCAGGAGTACTGCCATTTATCTaGATGGGTTTACAAATTCAG +
Preference number: 4 (lower is better)
Translates to: QELWPQDKKNTVRTKTSGVLPFI*MGLQIQ
Trigger: CTGAATTTGTAAACCCATTCAGATAAATGGCAGTAC...TCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTGGGGCCACAGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAAATCGCTTATTGCCTaGGTTGAACAAGTTACAAAC +
Preference number: 4 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACKSLIA*VEQVTN
Trigger: GTTTGTAACTTGTTCAACTCAGGCAATAAGCGATTT...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp AACAGAGCTTGGGTGACATGTTTTGAATTTGCAACCTTACCACACTGTGATGAAACTATGTCACTCTTATaGGTTCTGCTCAGGAACAAG +
Preference number: 4 (lower is better)
Translates to: NRAWVTCFEFATLPHCDETMSLL*VLLRNK
Trigger: CTTGTTCCTGAGCAGAACTCATAAGAGTGACATAGT...TTCATCACAGTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTTGTGTCCTAAAGTACTaGCATTTATCTGAATGGGTT +
Preference number: 4 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLCVLKY*HLSEWV
Trigger: AACCCATTCAGATAAATGGCAGTACTTTAGGACACA...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp TTCATTTTTCAGATCTCAGAGGGGAGTCTCAAGAGAAGGGACCTTGCCTTAATCAAAGTATTTGGTTCTTaGATCTTCTGCCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: FIFQISEGSLKRRDLALIKVFGS*IFCQDL
Trigger: TAAGTCCTGGCAGAAGATCCAAGAACCAAATACTTT...GATTAAGGCAAGGTCCCTTCTCTTGAGACTCCCCTCTGAGATCTGAAAAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAATAAAAAGAATACAGTaGGAACAAAGACCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKIKRIQ*EQRPQE
Trigger: CTCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTAT...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR GCA 90 bp ATGCAGATAGAGCCAATGACTTCATACATGGAACTTAAATTCAAGCTCCCTGCTTCAAACTCGCAATACTaGAAATTCCACAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: MQIEPMTSYMELKFKLPASNSQY*KFHNAD
Trigger: GTCAGCATTGTGGAATTTGCAGTATTGCGAGTTTGA...AGCAGGGAGCTTGAATTTAAGTTCCATGTATGAAGTCATTGGCTCTATCTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAAAAGTATTTGGTTCTTaGATCTTCTGCCAGGACTTA +
Preference number: 4 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKKVFGS*IFCQDL
Trigger: TAAGTCCTGGCAGAAGATCCAAGAACCAAATACTTT...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CCA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATAACATGAACAGAGCTTaGGTGACATGTTTTGAATTT +
Preference number: 4 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHNMNRA*VTCFEF
Trigger: AAATTCAAAACATGTCACCCAAGCTCTGTTCATGTT...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
3UTR CAA 72 bp GTCAAATTCAAAGATGCTCAAAAGGTGTTCCCTACTTaGCATGAGAGGGAGAGCTTTGTAACAGGAAATTGT +
Preference number: 4 (lower is better)
Translates to: VKFKDAQKVFPT*HERESFVTGNC
Trigger: ACAATTTCCTGTTACAAAGCTCTCCCTCTCATGCAAAGTAGGGAACACCTTTTGAGCATCTTTGAATTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp ATGCAGATAGAGCCAATGACTTCATACATGGAACTTAAATTCAAGCTCCCTGCTAAATCGCTTATTGCCTaGGTTGAACAAGTTACAAAC +
Preference number: 4 (lower is better)
Translates to: MQIEPMTSYMELKFKLPAKSLIA*VEQVTN
Trigger: GTTTGTAACTTGTTCAACTCAGGCAATAAGCGATTT...AGCAGGGAGCTTGAATTTAAGTTCCATGTATGAAGTCATTGGCTCTATCTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR TCA 90 bp ATGCAGATAGAGCCAATGACTTCATACATGGAACTTAAATTCAAGCTCCCTGCTTTTCTTCCAATAAATTaGGACACACAGCCCAGAATT +
Preference number: 4 (lower is better)
Translates to: MQIEPMTSYMELKFKLPAFLPIN*DTQPRI
Trigger: AATTCTGGGCTGTGTGTCTCAATTTATTGGAAGAAA...AGCAGGGAGCTTGAATTTAAGTTCCATGTATGAAGTCATTGGCTCTATCTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418919.6
CDS-3UTR GCA 90 bp AACAGAGCTTGGGTGACATGTTTTGAATTTGCAACCTTACCACACTGTGATGAATGTGTCCTAAAGTACTaGCATTTATCTGAATGGGTT +
Preference number: 4 (lower is better)
Translates to: NRAWVTCFEFATLPHCDECVLKY*HLSEWV
Trigger: AACCCATTCAGATAAATGGCAGTACTTTAGGACACA...TTCATCACAGTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp ATGCAGATAGAGCCAATGACTTCATACATGGAACTTAAATTCAAGCTCCCTGCTCCCAACATGACTATCTaGAATTCTGATAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: MQIEPMTSYMELKFKLPAPNMTI*NSDRKA
Trigger: AGCTTTTCTATCAGAATTGCAGATAGTCATGTTGGG...AGCAGGGAGCTTGAATTTAAGTTCCATGTATGAAGTCATTGGCTCTATCTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp GGTAAAACTCAAGAACCCAACTCTACCCATCTAATTCCATTGGTGGATCAGTTGAATAATCAAGAACTGTaGCCCCAGGATAAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: GKTQEPNSTHLIPLVDQLNNQEL*PQDKKN
Trigger: ATTCTTTTTATCCTGGGGCCACAGTTCTTGATTATT...CAACTGATCCACCAATGGAATTAGATGGGTAGAGTTGGGTTCTTGAGTTTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CCA 90 bp CAAACTCTCTATTCATTCCTAAGGCCTCTGTTCATTCCTAATGTTTACATGGTTTCCTCGAACCAACAGTaGAACTTTGATATCAAACTC +
Preference number: 4 (lower is better)
Translates to: QTLYSFLRPLFIPNVYMVSSNQQ*NFDIKL
Trigger: GAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGA...AACCATGTAAACATTAGGAATGAACAGAGGCCTTAGGAATGAATAGAGAGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp CAAACTCTCTATTCATTCCTAAGGCCTCTGTTCATTCCTAATGTTTACATGGTTCACTCTTATGAGTTCTaGTCAGGAACAAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: QTLYSFLRPLFIPNVYMVHSYEF*SGTSIK
Trigger: TTTTATGCTTGTTCCTGAGCAGAACTCATAAGAGTG...AACCATGTAAACATTAGGAATGAACAGAGGCCTTAGGAATGAATAGAGAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR GCA 90 bp AATACTGATAATCATACAAGACTCCAAAACTCAGGAAGAACCCATCTAAAAGGGTGTCAAATTCAAAGATaGTCAAAAGGTGTTCCCTAC +
Preference number: 4 (lower is better)
Translates to: NTDNHTRLQNSGRTHLKGCQIQR*SKGVPY
Trigger: GTAGGGAACACCTTTTGAGCATCTTTGAATTTGACA...CCCTTTTAGATGGGTTCTTCCTGAGTTTTGGAGTCTTGTATGATTATCAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS TCA 90 bp TCTTTAGCGGTGTCATGCCGCCGAGCACTTCGTCCTGGTCGTCCGTaGGGAGCAGCACCACGTTGGGCCTCCGGGTTCCCGCAGCCACCC +
Preference number: 5 (lower is better)
Translates to: SLAVSCRRALRPGRP*GAAPRWASGFPQPP
Trigger: GGGTGGCTGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGACACCGCTAAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258145.8
CDS TCA 90 bp CACTTGGCACATACATGCCGCCGAGCACTTCGTCCTGGTCGTCCGTaGGGAGCAGCACCACGTTGGGCCTCCGGGTTCCCGCAGCCACCC +
Preference number: 5 (lower is better)
Translates to: HLAHTCRRALRPGRP*GAAPRWASGFPQPP
Trigger: GGGTGGCTGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGTATGTGCCAAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS TCA 90 bp ATTCTGAAAAAGCCATGCCGCCGAGCACTTCGTCCTGGTCGTCCGTaGGGAGCAGCACCACGTTGGGCCTCCGGGTTCCCGCAGCCACCC +
Preference number: 5 (lower is better)
Translates to: ILKKPCRRALRPGRP*GAAPRWASGFPQPP
Trigger: GGGTGGCTGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGGCTTTTTCAGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543646.5
CDS CCA 90 bp CAGCAGAGAGCACTTGGCACATACATGCCGCCGAGCACTTCGTCCTaGTCGTCCGTGAGGAGCAGCACCACGTTGGGCCTCCGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: QQRALGTYMPPSTSS*SSVRSSTTLGLRVP
Trigger: GGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGTATGTGCCAAGTGCTCTCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS CCA 90 bp GCTTTGGTTTTCTTTAGCGGTGTCATGCCGCCGAGCACTTCGTCCTaGTCGTCCGTGAGGAGCAGCACCACGTTGGGCCTCCGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: ALVFFSGVMPPSTSS*SSVRSSTTLGLRVP
Trigger: GGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGACACCGCTAAAGAAAACCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258145.8
CDS CCA 90 bp GTGGTAGAATATTCTGAAAAAGCCATGCCGCCGAGCACTTCGTCCTaGTCGTCCGTGAGGAGCAGCACCACGTTGGGCCTCCGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: VVEYSEKAMPPSTSS*SSVRSSTTLGLRVP
Trigger: GGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGGCTTTTTCAGAATATTCTACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543646.5
CDS-3UTR CAA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCAGGAGCAGCACCACGTaGGGCCTCCGGGTTCCCGCA +
Preference number: 5 (lower is better)
Translates to: IPKIEERREGCTTSYHASRSSTT*GLRVPA
Trigger: TGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCT...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258145.8
CDS-3UTR CAA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGAGGAGCAGCACCACGTaGGGCCTCCGGGTTCCCGCA +
Preference number: 5 (lower is better)
Translates to: HLLQSLHQKEACRDPSAERSSTT*GLRVPA
Trigger: TGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCT...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS CCA 90 bp GTCTGGGAAGCATTGAGATACGCCAGGACTCAGGGAAGGGCATGTTaGGTCAGTGACGTTACGGCCTTCTCCTTGGTATTCCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: VWEALRYARTQGRAC*VSDVTAFSLVFHQD
Trigger: GTCCTGGTGGAATACCAAGGAGAAGGCCGTAACGTCACTGACCCAACATGCCCTTCCCTGAGTCCTGGCGTATCTCAATGCTTCCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCATAAAAAGCCGTGCCTaGAAGGCCGGTGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVIKSRA*KAGGWS
Trigger: ACTCCAGCCACCGGCCTTCAAGGCACGGCTTTTTAT...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS GCA 90 bp CAACGTGATGATTATGTGGGTACTTTCCTGTCAGGATACTGGCTCTaGTGGGGCAGCAGAGAGCACTTGGCACATACATGCCGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: QRDDYVGTFLSGYWL*WGSREHLAHTCRRA
Trigger: TGCTCGGCGGCATGTATGTGCCAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATCATCACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS CCA 90 bp CTCAGGGAAGGGCATGTTGGGTCAGTGACGTTACGGCCTTCTCCTTaGTATTCCACCAGGACATCTGATCGCCAGGTCAAGTTACTGGCA +
Preference number: 5 (lower is better)
Translates to: LREGHVGSVTLRPSP*YSTRTSDRQVKLLA
Trigger: TGCCAGTAACTTGACCTGGCGATCAGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAACGTCACTGACCCAACATGCCCTTCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000540883.1
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS CCA 90 bp CGTGATGATTATGTGGGTACTTTCCTGTCAGGATACTGGCTCTGCTaGGGCAGCAGAGAGCACTTGGCACATACATGCCGCCGAGCACTT +
Preference number: 5 (lower is better)
Translates to: RDDYVGTFLSGYWLC*GSREHLAHTCRRAL
Trigger: AAGTGCTCGGCGGCATGTATGTGCCAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATCATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS-3UTR CAA 90 bp CACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGTCGGCAGCAGAGAGCACTaGGCACATAAGCACTGGAAA +
Preference number: 5 (lower is better)
Translates to: HFIRKRRAGIHLQRLCEVGSREH*AHKHWK
Trigger: TTTCCAGTGCTTATGTGCCAAGTGCTCTCTGCTGCC...GACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR CAA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGACACTGCCGCGATaGCTGAACATGAGACGGGGG +
Preference number: 5 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRLTLPR*LNMRRG
Trigger: CCCCCGTCTCATGTTCAGCAATCGCGGCAGTGTCAG...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS TCA 90 bp GTGCAGCTGTCCAAGGCGAATGAGGCGCTGGAGTGGCGATCATCATaGAGAAGGGCTCAAAGTTGGACTTGTAGTCCAGAAAGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: VQLSKANEALEWRSS*RRAQSWTCSPESPR
Trigger: CCTTGGACTTTCTGGACTACAAGTCCAACTTTGAGCCCTTCTTCATGATGATCGCCACTCCAGCGCCTCATTCGCCTTGGACAGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS TCA 90 bp AGCATTGAGATACGCCAGGACTCAGGGAAGGGCATGTTGGGTCAGTaGCGTTACGGCCTTCTCCTTGGTATTCCACCAGGACATCTGATC +
Preference number: 5 (lower is better)
Translates to: SIEIRQDSGKGMLGQ*RYGLLLGIPPGHLI
Trigger: GATCAGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAACGTCACTGACCCAACATGCCCTTCCCTGAGTCCTGGCGTATCTCAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS TCA 90 bp TACTCACAGATACGCCAGGACTCAGGGAAGGGCATGTTGGGTCAGTaGCGTTACGGCCTTCTCCTTGGTATTCCACCAGGACATCTGATC +
Preference number: 5 (lower is better)
Translates to: YSQIRQDSGKGMLGQ*RYGLLLGIPPGHLI
Trigger: GATCAGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAACGTCACTGACCCAACATGCCCTTCCCTGAGTCCTGGCGTATCTGTGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540883.1
CDS CCA 90 bp AGCCTTCTGGTACTGAGGTGCAGCTGTCCAAGGCGAATGAGGCGCTaGAGTGGCGATCATCATGAAGAAGGGCTCAAAGTTGGACTTGTA +
Preference number: 5 (lower is better)
Translates to: SLLVLRCSCPRRMRR*SGDHHEEGLKVGLV
Trigger: TACAAGTCCAACTTTGAGCCCTTCTTCATGATGATCGCCACTCCAGCGCCTCATTCGCCTTGGACAGCTGCACCTCAGTACCAGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS CCA 90 bp CAAGCTATTACTCACAGATACGCCAGGACTCAGGGAAGGGCATGTTaGGTCAGTGACGTTACGGCCTTCTCCTTGGTATTCCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: QAITHRYARTQGRAC*VSDVTAFSLVFHQD
Trigger: GTCCTGGTGGAATACCAAGGAGAAGGCCGTAACGTCACTGACCCAACATGCCCTTCCCTGAGTCCTGGCGTATCTGTGAGTAATAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540883.1
CDS-3UTR CAA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGCTGACACTGCCGCGATaGCTGAACATGAGACGGGGG +
Preference number: 5 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVLTLPR*LNMRRG
Trigger: CCCCCGTCTCATGTTCAGCAATCGCGGCAGTGTCAG...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS GCA 90 bp GTTTCTTGGTGCAAAGACATTCTGGAAAGCCTTCTGGTACTGAGGTaGAGCTGTCCAAGGCGAATGAGGCGCTGGAGTGGCGATCATCAT +
Preference number: 5 (lower is better)
Translates to: VSWCKDILESLLVLR*SCPRRMRRWSGDHH
Trigger: ATGATGATCGCCACTCCAGCGCCTCATTCGCCTTGGACAGCTGCACCTCAGTACCAGAAGGCTTTCCAGAATGTCTTTGCACCAAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS CCA 90 bp ACTGCAGTTCCCCTCCAGAGTGTTGTTCACAACGTGATGATTATGTaGGTACTTTCCTGTCAGGATACTGGCTCTGCTGGGGCAGCAGAG +
Preference number: 5 (lower is better)
Translates to: TAVPLQSVVHNVMIM*VLSCQDTGSAGAAE
Trigger: CTCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATCATCACGTTGTGAACAACACTCTGGAGGGGAACTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS CCA 90 bp TGTTCACAACGTGATGATTATGTGGGTACTTTCCTGTCAGGATACTaGCTCTGCTGGGGCAGCAGAGAGCACTTGGCACATACATGCCGC +
Preference number: 5 (lower is better)
Translates to: CSQRDDYVGTFLSGY*LCWGSREHLAHTCR
Trigger: GCGGCATGTATGTGCCAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATCATCACGTTGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS-3UTR CAA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGCGTAATCCCAGCACTTaGGGAGGCCGAGAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVRNPST*GGRERW
Trigger: CCACCTTTCTCGGCCTCCCAAAGTGCTGGGATTACG...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS TCA 90 bp GTCAGTGACGTTACGGCCTTCTCCTTGGTATTCCACCAGGACATCTaGTCGCCAGGTCAAGTTACTGGCACCTCTCTTGCTTGTCTGATT +
Preference number: 5 (lower is better)
Translates to: VSDVTAFSLVFHQDI*SPGQVTGTSLACLI
Trigger: AATCAGACAAGCAAGAGAGGTGCCAGTAACTTGACCTGGCGATCAGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAACGTCACTGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540196.5
CDS CCA 90 bp TGTTCACAACGTGATGATTATGTGGGTACTTTCCTGTCAGGATACTaGCTCTGCTGGGGCAGCAGAGAGCACTTGGCACATAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: CSQRDDYVGTFLSGY*LCWGSREHLAHKHW
Trigger: CCAGTGCTTATGTGCCAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATCATCACGTTGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
ENST00000545273.1
CDS-3UTR CAA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCATAAAAAGCCGTGCCTaGAAGGCCGGTGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LQTPTTITSSERGVQGSIIKSRA*KAGGWS
Trigger: ACTCCAGCCACCGGCCTTCAAGGCACGGCTTTTTAT...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCTGGAGTGCGACAGGTaGGCCCAGAACAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: QLTGLLFQTGLKASPETLLECDR*AQNRTV
Trigger: TACAGTCCTGTTCTGGGCCAACCTGTCGCACTCCAG...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTGACACTGCCGCGATaGCTGAACATGAGACGGGGG +
Preference number: 5 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSLTLPR*LNMRRG
Trigger: CCCCCGTCTCATGTTCAGCAATCGCGGCAGTGTCAG...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGCTTCCAGGTGTGGTCTaGAAGACTAGCTACAGACAC +
Preference number: 5 (lower is better)
Translates to: LQSLHQKEACRDPSAEAVLPGVV*KTSYRH
Trigger: GTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG...CACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACACCTCAGGAGTGTCCTaGTCAGCTAAAGGAAGAGAC +
Preference number: 5 (lower is better)
Translates to: QRPQECPCQLKEETRDSHTSGVS*SAKGRD
Trigger: GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGT...GTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GGCGTGGCTGAGGTGCCGTCAGCAGCTGACTATGTCACTCTTATGAGTTCTGCTAGGTGTCCATTTCACTaGCCTGTTTCACCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: GVAEVPSAADYVTLMSSARCPFH*PVSPLD
Trigger: ATCTAGAGGTGAAACAGGCAAGTGAAATGGACACCT...AGCAGAACTCATAAGAGTGACATAGTCAGCTGCTGACGGCACCTCAGCCACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS TCA 90 bp CTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTaGGGTCGCTACAGAAGATGTTTGGAAAATCTTCGAGTCCTGACA +
Preference number: 5 (lower is better)
Translates to: LHQKEACRDPSAEAV*GRYRRCLENLRVLT
Trigger: TGTCAGGACTCGAAGATTTTCCAAACATCTTCTGTAGCGACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS GCA 90 bp CAACGTGATGATTATGTGGGTACTTTCCTGTCAGGATACTGGCTCTaGTGGGGCAGCAGAGAGCACTTGGCACATAAGCACTGGAAAAAG +
Preference number: 5 (lower is better)
Translates to: QRDDYVGTFLSGYWL*WGSREHLAHKHWKK
Trigger: CTTTTTCCAGTGCTTATGTGCCAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATCATCACGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
ENST00000545273.1
CDS CCA 90 bp CGTGATGATTATGTGGGTACTTTCCTGTCAGGATACTGGCTCTGCTaGGGCAGCAGAGAGCACTTGGCACATAAGCACTGGAAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: RDDYVGTFLSGYWLC*GSREHLAHKHWKKS
Trigger: TGACTTTTTCCAGTGCTTATGTGCCAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATCATCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
ENST00000545273.1
CDS-3UTR CAA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGGGCAGCAGAGAGCACTaGGCACATAAGCACTGGAAA +
Preference number: 5 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWGSREH*AHKHWK
Trigger: TTTCCAGTGCTTATGTGCCAAGTGCTCTCTGCTGCC...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR CAA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCGGCAGCAGAGAGCACTaGGCACATAAGCACTGGAAA +
Preference number: 5 (lower is better)
Translates to: LQTPTTITSSERGVQGSIGSREH*AHKHWK
Trigger: TTTCCAGTGCTTATGTGCCAAGTGCTCTCTGCTGCC...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR CAA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGGTGAACTCCAGCCTCTaGACCAGTTTCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVVNSSL*TSFSTR
Trigger: CCTTGTGGAGAAACTGGTCAAGAGGCTGGAGTTCAC...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCGTGAACTCCAGCCTCTaGACCAGTTTCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: LQTPTTITSSERGVQGSIVNSSL*TSFSTR
Trigger: CCTTGTGGAGAAACTGGTCAAGAGGCTGGAGTTCAC...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTGGACCCAAGTCAATGTaGGCAACCAGCATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GRVHSLTHCTRKSADWVAGPKSM*ATSILL
Trigger: AAGCAAGATGCTGGTTGCCAACATTGACTTGGGTCC...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCTGGAGTGCGACAGGTaGGCCCAGAACAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLLECDR*AQNRTV
Trigger: TACAGTCCTGTTCTGGGCCAACCTGTCGCACTCCAG...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CAAGAACTGTGGCCCCAGGATAAAAAGAATACAGTGAGAACAAAGACCTCAGGACTGGAGTGCGACAGGTaGGCCCAGAACAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: QELWPQDKKNTVRTKTSGLECDR*AQNRTV
Trigger: TACAGTCCTGTTCTGGGCCAACCTGTCGCACTCCAG...TCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTGGGGCCACAGTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCTGGAGTGCGACAGGTaGGCCCAGAACAGGACTGTA +
Preference number: 5 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHLECDR*AQNRTV
Trigger: TACAGTCCTGTTCTGGGCCAACCTGTCGCACTCCAG...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp TCTAAAACATTCACAGCAGAGGTGTCCATTTCACTTGCCTGTTTCACCTCTAGACTGACACTGCCGCGATaGCTGAACATGAGACGGGGG +
Preference number: 5 (lower is better)
Translates to: SKTFTAEVSISLACFTSRLTLPR*LNMRRG
Trigger: CCCCCGTCTCATGTTCAGCAATCGCGGCAGTGTCAG...TCTAGAGGTGAAACAGGCAAGTGAAATGGACACCTCTGCTGTGAATGTTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp CAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCCACTTGCTGGGAAAGTATTaGGTTCTTGGATCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: QRPQECPCQLKEETRDSHLLGKY*VLGSSA
Trigger: GGCAGAAGATCCAAGAACCAAATACTTTCCCAGCAA...GTGGCTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCGGACCCAAGTCAATGTaGGCAACCAGCATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LQTPTTITSSERGVQGSIGPKSM*ATSILL
Trigger: AAGCAAGATGCTGGTTGCCAACATTGACTTGGGTCC...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCCTTCCAGGTGTGGTCTaGAAGACTAGCTACAGACAC +
Preference number: 5 (lower is better)
Translates to: LQTPTTITSSERGVQGSILPGVV*KTSYRH
Trigger: GTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGACCTCAGGAGTGTCCTaGTCAGCTAAAGGAAGAGAC +
Preference number: 5 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWTSGVS*SAKGRD
Trigger: GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGT...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGTACAGCCCTTCCACTaGTCTGTTCAAGAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSVQPFH*SVQEPC
Trigger: ACAGGGCTCTTGAACAGACAAGTGGAAGGGCTGTAC...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp GGCGTGGCTGAGGTGCCGTCAGCAGCTGACTATGTCACTCTTATGAGTTCTGCTTTGCAACAGCACCATTaGTCAAATTCAAAGATGCTC +
Preference number: 5 (lower is better)
Translates to: GVAEVPSAADYVTLMSSALQQHH*SNSKML
Trigger: GAGCATCTTTGAATTTGACAAATGGTGCTGTTGCAA...AGCAGAACTCATAAGAGTGACATAGTCAGCTGCTGACGGCACCTCAGCCACGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAACGTAATCCCAGCACTTaGGGAGGCCGAGAAAGGTGG +
Preference number: 5 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKRNPST*GGRERW
Trigger: CCACCTTTCTCGGCCTCCCAAAGTGCTGGGATTACG...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS GCA 90 bp CCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTaGAGAGGCTGTGTGAGGTCGCTACAGAAGATGTTTGGAAAATCT +
Preference number: 5 (lower is better)
Translates to: PTTITSSERGVQGSI*RGCVRSLQKMFGKS
Trigger: AGATTTTCCAAACATCTTCTGTAGCGACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp TCAAGAGCTACCTGGAATTGGCCTTTATCACAAGCTTACTGCTCTATTTCAGTGATAAAAAGCCGTGCCTaGAAGGCCGGTGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SRATWNWPLSQAYCSISVIKSRA*KAGGWS
Trigger: ACTCCAGCCACCGGCCTTCAAGGCACGGCTTTTTAT...CACTGAAATAGAGCAGTAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258145.8
CDS-3UTR CAA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGTCTCCGATGAGAGCTTaGGTTTTCTTTAGCGGTGTC +
Preference number: 5 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQSPMRA*VFFSGV
Trigger: GACACCGCTAAAGAAAACCAAAGCTCTCATCGGAGA...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGGAAAGTATTTGGTTCTaGGATCTTCTGCCAGGACTT +
Preference number: 5 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCEESIWF*DLLPGL
Trigger: AAGTCCTGGCAGAAGATCCAAGAACCAAATACTTTC...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGTTGCTGGGAAAGTATTaGGTTCTTGGATCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HLLQSLHQKEACRDPSAELLGKY*VLGSSA
Trigger: GGCAGAAGATCCAAGAACCAAATACTTTCCCAGCAA...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTGTGAACTCCAGCCTCTaGACCAGTTTCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLVNSSL*TSFSTR
Trigger: CCTTGTGGAGAAACTGGTCAAGAGGCTGGAGTTCAC...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp ATACCAAAAATAGAAGAGCGTAGAGAGGGCTGCACCACATCCTACCACGCAAGCCGCTACAGAAGATGTTaGGAAAATCTTCGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: IPKIEERREGCTTSYHASRYRRC*ENLRVL
Trigger: CAGGACTCGAAGATTTTCCAAACATCTTCTGTAGCG...GCTTGCGTGGTAGGATGTGGTGCAGCCCTCTCTACGCTCTTCTATTTTTGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCTTCCAGGTGTGGTCTaGAAGACTAGCTACAGACAC +
Preference number: 5 (lower is better)
Translates to: QLTGLLFQTGLKASPETLLPGVV*KTSYRH
Trigger: GTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGCTAGTCAGCTGACTGGGTaGCTTTTTCAAACAGGACTT +
Preference number: 5 (lower is better)
Translates to: GRVHSLTHCTRKSADWVASQLTG*LFQTGL
Trigger: AAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTGACT...AGCAACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGTGCTACACAGGTCCTTaGACTTTAGGTCAAGCTTAC +
Preference number: 5 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRCYTGP*TLGQAY
Trigger: GTAAGCTTGACCTAAAGTCAAAGGACCTGTGTAGCA...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCGTACAGCCCTTCCACTaGTCTGTTCAAGAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACVQPFH*SVQEPC
Trigger: ACAGGGCTCTTGAACAGACAAGTGGAAGGGCTGTAC...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp AATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGCTGTGTGAGCCCTTGGAGTCCTGTTaGACAATTAGTGGTAGAATA +
Preference number: 5 (lower is better)
Translates to: NHFIRKRRAGIHLQRLCEPLESC*TISGRI
Trigger: TATTCTACCACTAATTGTCAAACAGGACTCCAAGGG...CTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543646.5
CDS-3UTR CAA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGGAAAGTATTTGGTTCTaGGATCTTCTGCCAGGACTT +
Preference number: 5 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRESIWF*DLLPGL
Trigger: AAGTCCTGGCAGAAGATCCAAGAACCAAATACTTTC...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp ATGGGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTTTGCTGGGAAAGTATTaGGTTCTTGGATCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: MGRVHSLTHCTRKSADWVLLGKY*VLGSSA
Trigger: GGCAGAAGATCCAAGAACCAAATACTTTCCCAGCAA...AACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GGTAAAACTCAAGAACCCAACTCTACCCATCTAATTCCATTGGTGGATCAGTTGGTGAACTCCAGCCTCTaGACCAGTTTCTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: GKTQEPNSTHLIPLVDQLVNSSL*TSFSTR
Trigger: CCTTGTGGAGAAACTGGTCAAGAGGCTGGAGTTCAC...CAACTGATCCACCAATGGAATTAGATGGGTAGAGTTGGGTTCTTGAGTTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp CACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGTCATACAGCTGTCTCTaGTCTATTGGCAAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: HLLQSLHQKEACRDPSAESYSCL*SIGKEN
Trigger: GTTTTCCTTGCCAATAGACAAGAGACAGCTGTATGA...CTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCGGACCCAAGTCAATGTaGGCAACCAGCATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACGPKSM*ATSILL
Trigger: AAGCAAGATGCTGGTTGCCAACATTGACTTGGGTCC...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGCGCTACAGAAGATGTTaGGAAAATCTTCGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWRYRRC*ENLRVL
Trigger: CAGGACTCGAAGATTTTCCAAACATCTTCTGTAGCG...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCCAGGTGTGGTCTaGAAGACTAGCTACAGACAC +
Preference number: 5 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSLPGVV*KTSYRH
Trigger: GTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGAGTCAGCTGACTGGGTaGCTTTTTCAAACAGGACTT +
Preference number: 5 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVSQLTG*LFQTGL
Trigger: AAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTGACT...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTAAGGTGTTCCCTACTTaGCATGAGAGGGAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: QLTGLLFQTGLKASPETLKVFPT*HERESF
Trigger: AAAGCTCTCCCTCTCATGCAAAGTAGGGAACACCTT...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGTCTCCGATGAGAGCTTaGGTTTTCTTTAGCGGTGTT +
Preference number: 5 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQSPMRA*VFFSGV
Trigger: AACACCGCTAAAGAAAACCAAAGCTCTCATCGGAGA...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543646.5
CDS GCA 90 bp CTGGGAAAGTATTTGGTTCTTGGATCTTCTGCCAGGACTTACTACTaGAGTTCCCCTCCAGAGTGTTGTTCACAACGTGATGATTATGTG +
Preference number: 5 (lower is better)
Translates to: LGKYLVLGSSARTYY*SSPPECCSQRDDYV
Trigger: CACATAATCATCACGTTGTGAACAACACTCTGGAGGGGAACTGCAGTAGTAAGTCCTGGCAGAAGATCCAAGAACCAAATACTTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS-3UTR CAA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCATCTCCGATGAGAGCTTaGGTTTTCTTTAGCGGTGTC +
Preference number: 5 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSSPMRA*VFFSGV
Trigger: GACACCGCTAAAGAAAACCAAAGCTCTCATCGGAGA...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGGAAAGTATTTGGTTCTaGGATCTTCTGCCAGGACTT +
Preference number: 5 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQESIWF*DLLPGL
Trigger: AAGTCCTGGCAGAAGATCCAAGAACCAAATACTTTC...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGGAAAGTATTTGGTTCTaGGATCTTCTGCCAGGACTT +
Preference number: 5 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVESIWF*DLLPGL
Trigger: AAGTCCTGGCAGAAGATCCAAGAACCAAATACTTTC...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp ACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGCAGAGGTGGATGTTGAAGTTCTaGTTTCTTGGTGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: TYYNHFIRKRRAGIHLQRWMLKF*FLGAKT
Trigger: TGTCTTTGCACCAAGAAACAAGAACTTCAACATCCA...CCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTTAGTCATTGGAGTCTaGGCTTGCCTAATTAACCAG +
Preference number: 5 (lower is better)
Translates to: LQTPTTITSSERGVQGSILVIGV*ACLINQ
Trigger: CTGGTTAATTAGGCAAGCCAAGACTCCAATGACTAA...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTTAGTCATTGGAGTCTaGGCTTGCCTAATTAACCAG +
Preference number: 5 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVLVIGV*ACLINQ
Trigger: CTGGTTAATTAGGCAAGCCAAGACTCCAATGACTAA...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTCATACAGCTGTCTCTaGTCTATTGGCAAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: LQTPTTITSSERGVQGSISYSCL*SIGKEN
Trigger: GTTTTCCTTGCCAATAGACAAGAGACAGCTGTATGA...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp ATGGGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTTCATACAGCTGTCTCTaGTCTATTGGCAAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: MGRVHSLTHCTRKSADWVSYSCL*SIGKEN
Trigger: GTTTTCCTTGCCAATAGACAAGAGACAGCTGTATGA...AACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGGACCCAAGTCAATGTaGGCAACCAGCATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKGPKSM*ATSILL
Trigger: AAGCAAGATGCTGGTTGCCAACATTGACTTGGGTCC...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CAGCTGACTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTAGTCAGCTGACTGGGTaGCTTTTTCAAACAGGACTT +
Preference number: 5 (lower is better)
Translates to: QLTGLLFQTGLKASPETLSQLTG*LFQTGL
Trigger: AAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTGACT...AAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp ATGGGCAGAGTTCACAGTTTAACACATTGCACGAGGAAGTCAGCTGACTGGGTTGGTACTTGTTCTTACTaGGATGATTCAGCTCTGATG +
Preference number: 5 (lower is better)
Translates to: MGRVHSLTHCTRKSADWVGTCSY*DDSALM
Trigger: CATCAGAGCTGAATCATCCAAGTAAGAACAAGTACC...AACCCAGTCAGCTGACTTCCTCGTGCAATGTGTTAAACTGTGAACTCTGCCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGCGCTTATTGCCTGAGTaGAACAAGTTACAAACCACA +
Preference number: 5 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQRLLPE*NKLQTT
Trigger: TGTGGTTTGTAACTTGTTCAACTCAGGCAATAAGCG...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATAAGGTGTTCCCTACTTaGCATGAGAGGGAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHKVFPT*HERESF
Trigger: AAAGCTCTCCCTCTCATGCAAAGTAGGGAACACCTT...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS GCA 90 bp ATTGATCTGAGAATTGCTGGGAAAGTATTTGGTTCTTGGATCTTCTaGCAGGACTTACTACTGCAGTTCCCCTCCAGAGTGTTGTTCACA +
Preference number: 5 (lower is better)
Translates to: IDLRIAGKVFGSWIF*QDLLLQFPSRVLFT
Trigger: TGTGAACAACACTCTGGAGGGGAACTGCAGTAGTAAGTCCTGGCAGAAGATCCAAGAACCAAATACTTTCCCAGCAATTCTCAGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS-3UTR CAA 90 bp CTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGGATGTTGAAGTTCTaGTTTCTTGGTGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: LQTPTTITSSERGVQGSIWMLKF*FLGAKT
Trigger: TGTCTTTGCACCAAGAAACAAGAACTTCAACATCCA...GATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp AGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAGACCAGAGACAGTGGATGTTGAAGTTCTaGTTTCTTGGTGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: RTKTSGVSLSAKGRDQRQWMLKF*FLGAKT
Trigger: TGTCTTTGCACCAAGAAACAAGAACTTCAACATCCA...CTGTCTCTGGTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTGGGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGACCAACAGTGGAACTTaGATATCAAACTCATACAGC +
Preference number: 5 (lower is better)
Translates to: LGCFFKQDLKPAQKLFQVTNSGT*ISNSYS
Trigger: GCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGT...CACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp ACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCGCTACAGAAGATGTTaGGAAAATCTTCGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: TLPGVVLKTSYRHLLQSLRYRRC*ENLRVL
Trigger: CAGGACTCGAAGATTTTCCAAACATCTTCTGTAGCG...AAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCGCTACAGAAGATGTTaGGAAAATCTTCGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHRYRRC*ENLRVL
Trigger: CAGGACTCGAAGATTTTCCAAACATCTTCTGTAGCG...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp CTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATAGTCAGCTGACTGGGTaGCTTTTTCAAACAGGACTT +
Preference number: 5 (lower is better)
Translates to: LPGVVLKTSYRHLLQSLHSQLTG*LFQTGL
Trigger: AAGTCCTGTTTGAAAAAGCAACCCAGTCAGCTGACT...ATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp TTAAAAGGAGGCAGCAAGCTTCTTGCAGTGGGTCCCTTAAACATTATGAAAACAACCTCAGGAGTGTCCTaGTCAGCTAAAGGAAGAGAC +
Preference number: 5 (lower is better)
Translates to: LKGGSKLLAVGPLNIMKTTSGVS*SAKGRD
Trigger: GTCTCTTCCTTTAGCTGACAAGGACACTCCTGAGGT...TGTTTTCATAATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCTCCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGTGTCCATTTCACTaGCCTGTTTCACCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACRCPFH*PVSPLD
Trigger: ATCTAGAGGTGAAACAGGCAAGTGAAATGGACACCT...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp GGTTGCTTTTTCAAACAGGACTTAAAGCCAGCCCAGAAACTCTTCCAGGTGTGGGAAAACATCAGTGCATaGTGTAGTCTGTTACGCTAT +
Preference number: 5 (lower is better)
Translates to: GCFFKQDLKPAQKLFQVWENISA*CSLLRY
Trigger: ATAGCGTAACAGACTACACAATGCACTGATGTTTTC...CCACACCTGGAAGAGTTTCTGGGCTGGCTTTAAGTCCTGTTTGAAAAAGCAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS TCA 90 bp CACCTCCTGGTCATCAAACTCGCAATACTGCAAATTCCACAATGCTaGCATTGTCCTCACACAGGCATAGGTATTGTTATAAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: HLLVIKLAILQIPQC*HCPHTGIGIVISIF
Trigger: GAAGATGCTTATAACAATACCTATGCCTGTGTGAGGACAATGTCAGCATTGTGGAATTTGCAGTATTGCGAGTTTGATGACCAGGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS GCA 90 bp CTCTGGGTCTATGGTTTTAGCAATGTTAGTGATCTGGTCTGGGTCTaGAGTCAGATTATAGACTTCTACAAACACCTCCTGGTCATCAAA +
Preference number: 5 (lower is better)
Translates to: LWVYGFSNVSDLVWV*SQIIDFYKHLLVIK
Trigger: TTTGATGACCAGGAGGTGTTTGTAGAAGTCTATAATCTGACTGCAGACCCAGACCAGATCACTAACATTGCTAAAACCATAGACCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS CCA 90 bp CTTGCTTGTCTGATTTGGTTTGATCCCAGGTCCTCGAACCAACAGTaGAACTTTGATATCAAACTCATACAGCTGTCTCTTGTCTATTGG +
Preference number: 5 (lower is better)
Translates to: LACLIWFDPRSSNQQ*NFDIKLIQLSLVYW
Trigger: CCAATAGACAAGAGACAGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGACCTGGGATCAAACCAAATCAGACAAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GAAACTCTTCCAGGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCATTAGTCATTGGAGTCTaGGCTTGCCTAATTAACCAG +
Preference number: 5 (lower is better)
Translates to: ETLPGVVLKTSYRHLLQSLVIGV*ACLINQ
Trigger: CTGGTTAATTAGGCAAGCCAAGACTCCAATGACTAA...TGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACCTGGAAGAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTACCAACAGTGGAACTTaGATATCAAACTCATACAGC +
Preference number: 5 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSTNSGT*ISNSYS
Trigger: GCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGT...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCGGTACTTGTTCTTACTaGGATGATTCAGCTCTGATG +
Preference number: 5 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACGTCSY*DDSALM
Trigger: CATCAGAGCTGAATCATCCAAGTAAGAACAAGTACC...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCCGCTTATTGCCTGAGTaGAACAAGTTACAAACCACA +
Preference number: 5 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACRLLPE*NKLQTT
Trigger: TGTGGTTTGTAACTTGTTCAACTCAGGCAATAAGCG...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTGAAAACATCAGTGCATaGTGTAGTCTGTTACGCTAT +
Preference number: 5 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSENISA*CSLLRY
Trigger: ATAGCGTAACAGACTACACAATGCACTGATGTTTTC...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp TACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTTTGCAACAGCACCATTaGTCAAATTCAAAGATGCTC +
Preference number: 5 (lower is better)
Translates to: YRHLLQSLHQKEACRDPSLQQHH*SNSKML
Trigger: GAGCATCTTTGAATTTGACAAATGGTGCTGTTGCAA...AGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCACCAACAGTGGAACTTaGATATCAAACTCATACAGC +
Preference number: 5 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACTNSGT*ISNSYS
Trigger: GCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGT...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAATGGATGTTGAAGTTCTaGTTTCTTGGTGCAAAGACA +
Preference number: 5 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKWMLKF*FLGAKT
Trigger: TGTCTTTGCACCAAGAAACAAGAACTTCAACATCCA...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
CDS-3UTR CAA 90 bp TTAAAAGGAGGCAGCAAGCTTCTTGCAGTGGGTCCCTTAAACATTATGAAAACATTAGTCATTGGAGTCTaGGCTTGCCTAATTAACCAG +
Preference number: 5 (lower is better)
Translates to: LKGGSKLLAVGPLNIMKTLVIGV*ACLINQ
Trigger: CTGGTTAATTAGGCAAGCCAAGACTCCAATGACTAA...TGTTTTCATAATGTTTAAGGGACCCACTGCAAGAAGCTTGCTGCCTCCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp AACAGAGCTTGGGTGACATGTTTTGAATTTGCAACCTTACCACACTGTGATGAATCATACAGCTGTCTCTaGTCTATTGGCAAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: NRAWVTCFEFATLPHCDESYSCL*SIGKEN
Trigger: GTTTTCCTTGCCAATAGACAAGAGACAGCTGTATGA...TTCATCACAGTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp AAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAACCAACAGTGGAACTTaGATATCAAACTCATACAGC +
Preference number: 5 (lower is better)
Translates to: KNTVRTKTSGVSLSAKGRTNSGT*ISNSYS
Trigger: GCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGT...TCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
CDS-3UTR CAA 90 bp AACAGAGCTTGGGTGACATGTTTTGAATTTGCAACCTTACCACACTGTGATGAAAAGAGCTACCTGGAATaGGCCTTTATCACAAGCTTA +
Preference number: 5 (lower is better)
Translates to: NRAWVTCFEFATLPHCDEKSYLE*AFITSL
Trigger: TAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTT...TTCATCACAGTGTGGTAAGGTTGCAAATTCAAAACATGTCACCCAAGCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp TTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAAGAGGCGTGCACAACAGCCCTAGTGTaGTCAATTAAAATGTGTTTG +
Preference number: 5 (lower is better)
Translates to: LKTSYRHLLQSLHQKEACTTALV*SIKMCL
Trigger: CAAACACATTTTAATTGACAACACTAGGGCTGTTGT...GCACGCCTCTTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp CAAGAACTGTGGCCCCAGGATAAAAAGAATACAGTGAGAACAAAGACCTCAGGAATTTCTTCCAATAAATaGAGACACACAGCCCAGAAT +
Preference number: 5 (lower is better)
Translates to: QELWPQDKKNTVRTKTSGISSNK*RHTAQN
Trigger: ATTCTGGGCTGTGTGTCTCAATTTATTGGAAGAAAT...TCCTGAGGTCTTTGTTCTCACTGTATTCTTTTTATCCTGGGGCCACAGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418919.6
CDS-3UTR CAA 90 bp AATACTGATAATCATACAAGACTCCAAAACTCAGGAAGAACCCATCTAAAAGGGTTGCTGGGAAAGTATTaGGTTCTTGGATCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: NTDNHTRLQNSGRTHLKGLLGKY*VLGSSA
Trigger: GGCAGAAGATCCAAGAACCAAATACTTTCCCAGCAA...CCCTTTTAGATGGGTTCTTCCTGAGTTTTGGAGTCTTGTATGATTATCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp AAGAATACAGTGAGAACAAAGACCTCAGGAGTGTCCTTGTCAGCTAAAGGAAGAACAACAGCCCTAGTGTaGTCAATTAAAATGTGTTTG +
Preference number: 5 (lower is better)
Translates to: KNTVRTKTSGVSLSAKGRTTALV*SIKMCL
Trigger: CAAACACATTTTAATTGACAACACTAGGGCTGTTGT...TCTTCCTTTAGCTGACAAGGACACTCCTGAGGTCTTTGTTCTCACTGTATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS-3UTR CAA 90 bp GGTGTGGTCTTGAAGACTAGCTACAGACACCTACTACAATCACTTCATCAGAAACCCAGAATTCCTGTTTaGTTACATCTTACTCAATCT +
Preference number: 5 (lower is better)
Translates to: GVVLKTSYRHLLQSLHQKPRIPV*LHLTQS
Trigger: AGATTGAGTAAGATGTAACAAAACAGGAATTCTGGG...TTTCTGATGAAGTGATTGTAGTAGGTGTCTGTAGCTAGTCTTCAAGACCACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418919.6
CDS GCA 90 bp AACATCTGTCAGGTAGTCCACACTATAGTTTTCACCATGCTTCCGTaGCTTCCCATTGATAGACAGGGTGTAATTATAATACTTAGAATT +
Preference number: 5 (lower is better)
Translates to: NICQVVHTIVFTMLP*LPIDRQGVIIILRI
Trigger: AATTCTAAGTATTATAATTACACCCTGTCTATCAATGGGAAGGCACGGAAGCATGGTGAAAACTATAGTGTGGACTACCTGACAGATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS-3UTR CAA 90 bp AATACTGATAATCATACAAGACTCCAAAACTCAGGAAGAACCCATCTAAAAGGGAAGAGCTACCTGGAATaGGCCTTTATCACAAGCTTA +
Preference number: 5 (lower is better)
Translates to: NTDNHTRLQNSGRTHLKGKSYLE*AFITSL
Trigger: TAAGCTTGTGATAAAGGCCAATTCCAGGTAGCTCTT...CCCTTTTAGATGGGTTCTTCCTGAGTTTTGGAGTCTTGTATGATTATCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258145.8
ENST00000418919.6
CDS GCA 90 bp TTATCTAAAAACTGTATTGAAGAATTAGTCATTGGAGTCTTGGCTTaGCTAATTAACCAGTGCTTGTTCGTTCCATGGATGTTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: LSKNCIEELVIGVLA*LINQCLFVPWMLKF
Trigger: GAACTTCAACATCCATGGAACGAACAAGCACTGGTTAATTAGGCAAGCCAAGACTCCAATGACTAATTCTTCAATACAGTTTTTAGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS CAA 90 bp CCGCCGAGCACTTCGTCCTGGTCGTCCGTGAGGAGCAGCACCACGTaGGGCCTCCGGGTTCCCGCAGCCACCCCGAAGACCCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: PPSTSSWSSVRSSTT*GLRVPAATPKTPRQ
Trigger: CTGCCTGGGGGTCTTCGGGGTGGCTGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS TCA 72 bp GTGTCATGCCGCCGAGCACTTCGTCCTGGTCGTCCGTaGGGAGCAGCACCACGTTGGGCCTCCGGGTTCCCG +
Preference number: 6 (lower is better)
Translates to: VSCRRALRPGRP*GAAPRWASGFP
Trigger: CGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258145.8
CDS TCA 72 bp AAGCCATGCCGCCGAGCACTTCGTCCTGGTCGTCCGTaGGGAGCAGCACCACGTTGGGCCTCCGGGTTCCCG +
Preference number: 6 (lower is better)
Translates to: KPCRRALRPGRP*GAAPRWASGFP
Trigger: CGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543646.5
CDS CAA 72 bp ACTTCGTCCTGGTCGTCCGTGAGGAGCAGCACCACGTaGGGCCTCCGGGTTCCCGCAGCCACCCCGAAGACC +
Preference number: 6 (lower is better)
Translates to: TSSWSSVRSSTT*GLRVPAATPKT
Trigger: GGTCTTCGGGGTGGCTGCGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258145.8
ENST00000542058.5
ENST00000543646.5
CDS TCA 72 bp CATACATGCCGCCGAGCACTTCGTCCTGGTCGTCCGTaGGGAGCAGCACCACGTTGGGCCTCCGGGTTCCCG +
Preference number: 6 (lower is better)
Translates to: HTCRRALRPGRP*GAAPRWASGFP
Trigger: CGGGAACCCGGAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGTATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS CCA 72 bp GCACTTGGCACATACATGCCGCCGAGCACTTCGTCCTaGTCGTCCGTGAGGAGCAGCACCACGTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: ALGTYMPPSTSS*SSVRSSTTLGL
Trigger: GAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGTATGTGCCAAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS CCA 72 bp TTCTTTAGCGGTGTCATGCCGCCGAGCACTTCGTCCTaGTCGTCCGTGAGGAGCAGCACCACGTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: FFSGVMPPSTSS*SSVRSSTTLGL
Trigger: GAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGACACCGCTAAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258145.8
CDS GCA 72 bp GGCGAGAGGCCGACCAGCCGAAGGAATAAAAAGCCGTaGCTTGAAGGCCGGTGGCTGGAGTCAGACGTTTTC +
Preference number: 6 (lower is better)
Translates to: GERPTSRRNKKP*LEGRWLESDVF
Trigger: GAAAACGTCTGACTCCAGCCACCGGCCTTCAAGGCACGGCTTTTTATTCCTTCGGCTGGTCGGCCTCTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS CCA 72 bp TATTCTGAAAAAGCCATGCCGCCGAGCACTTCGTCCTaGTCGTCCGTGAGGAGCAGCACCACGTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: YSEKAMPPSTSS*SSVRSSTTLGL
Trigger: GAGGCCCAACGTGGTGCTGCTCCTCACGGACGACCAGGACGAAGTGCTCGGCGGCATGGCTTTTTCAGAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543646.5
CDS TCA 72 bp ATACGCCAGGACTCAGGGAAGGGCATGTTGGGTCAGTaGCGTTACGGCCTTCTCCTTGGTATTCCACCAGGA +
Preference number: 6 (lower is better)
Translates to: IRQDSGKGMLGQ*RYGLLLGIPPG
Trigger: TCCTGGTGGAATACCAAGGAGAAGGCCGTAACGTCACTGACCCAACATGCCCTTCCCTGAGTCCTGGCGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000540883.1
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS CCA 72 bp GGGCATGTTGGGTCAGTGACGTTACGGCCTTCTCCTTaGTATTCCACCAGGACATCTGATCGCCAGGTCAAG +
Preference number: 6 (lower is better)
Translates to: GHVGSVTLRPSP*YSTRTSDRQVK
Trigger: CTTGACCTGGCGATCAGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAACGTCACTGACCCAACATGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000540883.1
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS CCA 72 bp GTACTGAGGTGCAGCTGTCCAAGGCGAATGAGGCGCTaGAGTGGCGATCATCATGAAGAAGGGCTCAAAGTT +
Preference number: 6 (lower is better)
Translates to: VLRCSCPRRMRR*SGDHHEEGLKV
Trigger: AACTTTGAGCCCTTCTTCATGATGATCGCCACTCCAGCGCCTCATTCGCCTTGGACAGCTGCACCTCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS CCA 72 bp GCATTGAGATACGCCAGGACTCAGGGAAGGGCATGTTaGGTCAGTGACGTTACGGCCTTCTCCTTGGTATTC +
Preference number: 6 (lower is better)
Translates to: ALRYARTQGRAC*VSDVTAFSLVF
Trigger: GAATACCAAGGAGAAGGCCGTAACGTCACTGACCCAACATGCCCTTCCCTGAGTCCTGGCGTATCTCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS CCA 72 bp ACTCACAGATACGCCAGGACTCAGGGAAGGGCATGTTaGGTCAGTGACGTTACGGCCTTCTCCTTGGTATTC +
Preference number: 6 (lower is better)
Translates to: THRYARTQGRAC*VSDVTAFSLVF
Trigger: GAATACCAAGGAGAAGGCCGTAACGTCACTGACCCAACATGCCCTTCCCTGAGTCCTGGCGTATCTGTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540883.1
CDS TCA 72 bp GTTACGGCCTTCTCCTTGGTATTCCACCAGGACATCTaGTCGCCAGGTCAAGTTACTGGCACCTCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: VTAFSLVFHQDI*SPGQVTGTSLA
Trigger: AGCAAGAGAGGTGCCAGTAACTTGACCTGGCGATCAGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540196.5
CDS GCA 72 bp GATTATGTGGGTACTTTCCTGTCAGGATACTGGCTCTaGTGGGGCAGCAGAGAGCACTTGGCACATAAGCAC +
Preference number: 6 (lower is better)
Translates to: DYVGTFLSGYWL*WGSREHLAHKH
Trigger: GTGCTTATGTGCCAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000543646.5
ENST00000545273.1
CDS GCA 72 bp GATTATGTGGGTACTTTCCTGTCAGGATACTGGCTCTaGTGGGGCAGCAGAGAGCACTTGGCACATACATGC +
Preference number: 6 (lower is better)
Translates to: DYVGTFLSGYWL*WGSREHLAHTC
Trigger: GCATGTATGTGCCAAGTGCTCTCTGCTGCCCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542058.5
CDS TCA 72 bp TCCAAGGCGAATGAGGCGCTGGAGTGGCGATCATCATaGAGAAGGGCTCAAAGTTGGACTTGTAGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: SKANEALEWRSS*RRAQSWTCSPE
Trigger: TTCTGGACTACAAGTCCAACTTTGAGCCCTTCTTCATGATGATCGCCACTCCAGCGCCTCATTCGCCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS CCA 72 bp CCCCTCCAGAGTGTTGTTCACAACGTGATGATTATGTaGGTACTTTCCTGTCAGGATACTGGCTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: PLQSVVHNVMIM*VLSCQDTGSAG
Trigger: CCCAGCAGAGCCAGTATCCTGACAGGAAAGTACCCACATAATCATCACGTTGTGAACAACACTCTGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS CAA 72 bp TGTTTGGAAAATCTTCGAGTCCTGACACTGCCGCGATaGCTGAACATGAGACGGGGGTCAAACCTGTATCCG +
Preference number: 6 (lower is better)
Translates to: CLENLRVLTLPR*LNMRRGSNLYP
Trigger: CGGATACAGGTTTGACCCCCGTCTCATGTTCAGCAATCGCGGCAGTGTCAGGACTCGAAGATTTTCCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS TCA 72 bp GTTACGGCCTTCTCCTTGGTATTCCACCAGGACATCTaGTCGCCAGGTCAAGTTACTGGCACCTCTCAAAAT +
Preference number: 6 (lower is better)
Translates to: VTAFSLVFHQDI*SPGQVTGTSQN
Trigger: ATTTTGAGAGGTGCCAGTAACTTGACCTGGCGATCAGATGTCCTGGTGGAATACCAAGGAGAAGGCCGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540883.1
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS GCA 72 bp ATCACTTCATCAGAAAGAGGCGTGCAGGGATCCATCTaGAGAGGCTGTGTGAGGTCGCTACAGAAGATGTTT +
Preference number: 6 (lower is better)
Translates to: ITSSERGVQGSI*RGCVRSLQKMF
Trigger: AAACATCTTCTGTAGCGACCTCACACAGCCTCTGCAGATGGATCCCTGCACGCCTCTTTCTGATGAAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS CCA 72 bp GTCAATGTTGGCAACCAGCATCTTGCTTGTCTGATTTaGTTTGATCCCAGGTCCTCGAACCAACAGTGGAAC +
Preference number: 6 (lower is better)
Translates to: VNVGNQHLACLI*FDPRSSNQQWN
Trigger: GTTCCACTGTTGGTTCGAGGACCTGGGATCAAACCAAATCAGACAAGCAAGATGCTGGTTGCCAACATTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS GCA 72 bp AGAATTGCTGGGAAAGTATTTGGTTCTTGGATCTTCTaGCAGGACTTACTACTGCAGTTCCCCTCCAGAGTG +
Preference number: 6 (lower is better)
Translates to: RIAGKVFGSWIF*QDLLLQFPSRV
Trigger: CACTCTGGAGGGGAACTGCAGTAGTAAGTCCTGGCAGAAGATCCAAGAACCAAATACTTTCCCAGCAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS TCA 72 bp CAGCCTCTTGACCAGTTTCTCCACAAGGTCATCAACTaGGAGGAGAGTTTGCCACCTTTTCCTAAATGCATT +
Preference number: 6 (lower is better)
Translates to: QPLDQFLHKVIN*EESLPPFPKCI
Trigger: AATGCATTTAGGAAAAGGTGGCAAACTCTCCTCTCAGTTGATGACCTTGTGGAGAAACTGGTCAAGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS TCA 72 bp TGGCAAGGAAAACTGTCCTGTGTGATAGCCATTGTCTaGGGTATAGAAGATGTAAGTGTTGTTGAGCTCCCC +
Preference number: 6 (lower is better)
Translates to: WQGKLSCVIAIV*GIEDVSVVELP
Trigger: GGGGAGCTCAACAACACTTACATCTTCTATACCTCAGACAATGGCTATCACACAGGACAGTTTTCCTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS GCA 72 bp TATTTGGTTCTTGGATCTTCTGCCAGGACTTACTACTaGAGTTCCCCTCCAGAGTGTTGTTCACAACGTGAT +
Preference number: 6 (lower is better)
Translates to: YLVLGSSARTYY*SSPPECCSQRD
Trigger: ATCACGTTGTGAACAACACTCTGGAGGGGAACTGCAGTAGTAAGTCCTGGCAGAAGATCCAAGAACCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS CAA 90 bp TTTTATTCCCAAATGGTCAGCTCTAAGCAACAGCCAAAGAGAGTCTaGTATGATTCTAGAGACAAGTTTGGTTCCGGCCAGCTCCATCCT +
Preference number: 6 (lower is better)
Translates to: FYSQMVSSKQQPKRV*YDSRDKFGSGQLHP
Trigger: AGGATGGAGCTGGCCGGAACCAAACTTGTCTCTAGAATCATACAAGACTCTCTTTGGCTGTTGCTTAGAGCTGACCATTTGGGAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545273.1
CDS CCA 72 bp ATTGATCTGAGAATTGCTGGGAAAGTATTTGGTTCTTaGATCTTCTGCCAGGACTTACTACTGCAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: IDLRIAGKVFGS*IFCQDLLLQFP
Trigger: GGGGAACTGCAGTAGTAAGTCCTGGCAGAAGATCCAAGAACCAAATACTTTCCCAGCAATTCTCAGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS CAA 72 bp AGCCAAAGAGAGTCTTGTATGATTCTAGAGACAAGTTaGGTTCCGGCCAGCTCCATCCTGTATAAAAGTGCA +
Preference number: 6 (lower is better)
Translates to: SQRESCMILETS*VPASSILYKSA
Trigger: TGCACTTTTATACAGGATGGAGCTGGCCGGAACCAAACTTGTCTCTAGAATCATACAAGACTCTCTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545273.1
CDS CCA 72 bp CTGATTTGGTTTGATCCCAGGTCCTCGAACCAACAGTaGAACTTTGATATCAAACTCATACAGCTGTCTCTT +
Preference number: 6 (lower is better)
Translates to: LIWFDPRSSNQQ*NFDIKLIQLSL
Trigger: AAGAGACAGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGACCTGGGATCAAACCAAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS CAA 72 bp GGTTTGATCCCAGGTCCTCGAACCAACAGTGGAACTTaGATATCAAACTCATACAGCTGTCTCTTGTCTATT +
Preference number: 6 (lower is better)
Translates to: GLIPGPRTNSGT*ISNSYSCLLSI
Trigger: AATAGACAAGAGACAGCTGTATGAGTTTGATATCAAAGTTCCACTGTTGGTTCGAGGACCTGGGATCAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS CAA 72 bp CCAGCAATGTCCAAAATAGTAGGACCCAAGTCAATGTaGGCAACCAGCATCTATGAGAATGAGGGAAAAACA +
Preference number: 6 (lower is better)
Translates to: PAMSKIVGPKSM*ATSIYENEGKT
Trigger: TGTTTTTCCCTCATTCTCATAGATGCTGGTTGCCAACATTGACTTGGGTCCTACTATTTTGGACATTGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537823.1
ENST00000540883.1
CDS GCA 72 bp CAGGTAGTCCACACTATAGTTTTCACCATGCTTCCGTaGCTTCCCATTGATAGACAGGGTGTAATTATAATA +
Preference number: 6 (lower is better)
Translates to: QVVHTIVFTMLP*LPIDRQGVIII
Trigger: TATTATAATTACACCCTGTCTATCAATGGGAAGGCACGGAAGCATGGTGAAAACTATAGTGTGGACTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1
CDS GCA 72 bp TATGGTTTTAGCAATGTTAGTGATCTGGTCTGGGTCTaGAGTCAGATTATAGACTTCTACAAACACCTCCTG +
Preference number: 6 (lower is better)
Translates to: YGFSNVSDLVWV*SQIIDFYKHLL
Trigger: CAGGAGGTGTTTGTAGAAGTCTATAATCTGACTGCAGACCCAGACCAGATCACTAACATTGCTAAAACCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS TCA 72 bp GTCATCAAACTCGCAATACTGCAAATTCCACAATGCTaGCATTGTCCTCACACAGGCATAGGTATTGTTATA +
Preference number: 6 (lower is better)
Translates to: VIKLAILQIPQC*HCPHTGIGIVI
Trigger: TATAACAATACCTATGCCTGTGTGAGGACAATGTCAGCATTGTGGAATTTGCAGTATTGCGAGTTTGATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000537823.1
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
CDS CCA 72 bp GTTTTCTTTAGCGGTGTTCAATCTTTTATTCCCAAATaGTCAGCTCTAAGCAACAGCCAAAGAGAGTCTTGT +
Preference number: 6 (lower is better)
Translates to: VFFSGVQSFIPK*SALSNSQRESC
Trigger: ACAAGACTCTCTTTGGCTGTTGCTTAGAGCTGACCATTTGGGAATAAAAGATTGAACACCGCTAAAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545273.1
CDS CAA 90 bp AATGCATTATCTAAAAACTGTATTGAAGAATTAGTCATTGGAGTCTaGGCTTGCCTAATTAACCAGTGCTTGTTCGTTCCATGGATGTTG +
Preference number: 6 (lower is better)
Translates to: NALSKNCIEELVIGV*ACLINQCLFVPWML
Trigger: CAACATCCATGGAACGAACAAGCACTGGTTAATTAGGCAAGCCAAGACTCCAATGACTAATTCTTCAATACAGTTTTTAGATAATGCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258145.8
ENST00000418919.6
ENST00000540196.5
ENST00000541781.5
ENST00000542058.5
ENST00000543646.5
ENST00000545273.1