Pregenerated sensors for GNRH2 (Homo sapiens)
Ensembl gene IDs: ENSG00000125787Ensembl transcript IDs: ENST00000245983.6, ENST00000359100.6, ENST00000380346.2, ENST00000380347.6
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTGTCCGTGCCAGGTGTCGCTTCCTGTGAAGGGACCACTGGGCCGTaGTCCTGCCCTCCCAGGGCATGCTGTCGTCCAGGGGAGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: VSVPGVASCEGTTGP*SCPPRACCRPGEPG Trigger: CCCTGGCTCCCCTGGACGACAGCATGCCCTGGGAGGGCAGGACCACGGCCCAGTGGTCCCTTCACAGGAAGCGACACCTGGCACGGACAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000245983.6 ENST00000359100.6 ENST00000380346.2 ENST00000380347.6 |
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| CDS GCA 90 bp | GTGCCAGGTGTCGCTTCCTGTGAAGGGACCACTGGGCCGTGGTCCTaGCCTCCCAGGGCATGCTGTCGTCCAGGGGAGCCAGGGCATCAC | + |
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Preference number: 5 (lower is better) Translates to: VPGVASCEGTTGPWS*PPRACCRPGEPGHH Trigger: GTGATGCCCTGGCTCCCCTGGACGACAGCATGCCCTGGGAGGGCAGGACCACGGCCCAGTGGTCCCTTCACAGGAAGCGACACCTGGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000245983.6 ENST00000359100.6 ENST00000380346.2 ENST00000380347.6 |
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| CDS GCA 90 bp | CAGGGCATCACTTGGGAGGCCATGGGCAGTCTGGACTGGGCTGCCTaGTGCAGTGTCCAGGGCCCTTCCTGGGGGCCTAAGGGCATTCTG | + |
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Preference number: 5 (lower is better) Translates to: QGITWEAMGSLDWAA*CSVQGPSWGPKGIL Trigger: CAGAATGCCCTTAGGCCCCCAGGAAGGGCCCTGGACACTGCAGCAGGCAGCCCAGTCCAGACTGCCCATGGCCTCCCAAGTGATGCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000245983.6 |
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| CDS GCA 90 bp | CAGCAGCAGCAGGAGCAGGAGGCCTCGCCTGGAGCTGGCCATGGCTaGTCTAATGGACAGGGTACAGCATTCAAGGAGACTTACCTCACC | + |
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Preference number: 5 (lower is better) Translates to: QQQQEQEASPGAGHG*SNGQGTAFKETYLT Trigger: GGTGAGGTAAGTCTCCTTGAATGCTGTACCCTGTCCATTAGAGCAGCCATGGCCAGCTCCAGGCGAGGCCTCCTGCTCCTGCTGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380347.6 |
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| CDS GCA 90 bp | GCATCTCAGGGGCAGCTTTGGTATCTCCTTATGCCCTTCCCTCTCTaGCACCGCTCCTCATCCCAAGCATACAGGGGTCCAGATCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ASQGQLWYLLMPFPL*HRSSSQAYRGPDPG Trigger: CCCAGGATCTGGACCCCTGTATGCTTGGGATGAGGAGCGGTGGCAGAGAGGGAAGGGCATAAGGAGATACCAAAGCTGCCCCTGAGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380347.6 |
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| CDS CCA 90 bp | TTCCTCCAGGGCCACTTTGGAAAACTGGCATCTCAGGGGCAGCTTTaGTATCTCCTTATGCCCTTCCCTCTCTGCCACCGCTCCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: FLQGHFGKLASQGQL*YLLMPFPLCHRSSS Trigger: GGATGAGGAGCGGTGGCAGAGAGGGAAGGGCATAAGGAGATACCAAAGCTGCCCCTGAGATGCCAGTTTTCCAAAGTGGCCCTGGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380347.6 |
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| CDS TCA 90 bp | AAGGAGTTTCCAGAAGTGGAAGAAAGTTGGAGGGGAACAGAGACCTaGATTCAGGCCAATGGATGGGAGGATAGATGGATGGTCAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: KEFPEVEESWRGTET*IQANGWEDRWMVRG Trigger: TCCCCTGACCATCCATCTATCCTCCCATCCATTGGCCTGAATTCAGGTCTCTGTTCCCCTCCAACTTTCTTCCACTTCTGGAAACTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380347.6 |
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| CDS CCA 90 bp | ACTTGTCCAGGTCCATCCATCTTTCCTTCAAGGAGTTTCCAGAAGTaGAAGAAAGTTGGAGGGGAACAGAGACCTGAATTCAGGCCAATG | + |
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Preference number: 5 (lower is better) Translates to: TCPGPSIFPSRSFQK*KKVGGEQRPEFRPM Trigger: CATTGGCCTGAATTCAGGTCTCTGTTCCCCTCCAACTTTCTTCCACTTCTGGAAACTCCTTGAAGGAAAGATGGATGGACCTGGACAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380347.6 |
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| CDS GCA 72 bp | GGGACCACTGGGCCGTGGTCCTGCCCTCCCAGGGCATaGTGTCGTCCAGGGGAGCCAGGGCATCACTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GTTGPWSCPPRA*CRPGEPGHHLG Trigger: TCCCAAGTGATGCCCTGGCTCCCCTGGACGACAGCATGCCCTGGGAGGGCAGGACCACGGCCCAGTGGTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000245983.6 ENST00000359100.6 ENST00000380346.2 ENST00000380347.6 |
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| CDS TCA 72 bp | GCGGTCAGCAGTGTCCGTGCCAGGTGTCGCTTCCTGTaGAGGGACCACTGGGCCGTGGTCCTGCCCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: AVSSVRARCRFL*RDHWAVVLPSQ Trigger: CTGGGAGGGCAGGACCACGGCCCAGTGGTCCCTTCACAGGAAGCGACACCTGGCACGGACACTGCTGACCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000245983.6 ENST00000359100.6 ENST00000380346.2 ENST00000380347.6 |
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| CDS CCA 72 bp | CCAGGTGTCGCTTCCTGTGAAGGGACCACTGGGCCGTaGTCCTGCCCTCCCAGGGCATGCTGTCGTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PGVASCEGTTGP*SCPPRACCRPG Trigger: CCCTGGACGACAGCATGCCCTGGGAGGGCAGGACCACGGCCCAGTGGTCCCTTCACAGGAAGCGACACCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000245983.6 ENST00000359100.6 ENST00000380346.2 ENST00000380347.6 |
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| CDS GCA 72 bp | CAGGAGCAGGAGGCCTCGCCTGGAGCTGGCCATGGCTaGTCTAATGGACAGGGTACAGCATTCAAGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: QEQEASPGAGHG*SNGQGTAFKET Trigger: AGTCTCCTTGAATGCTGTACCCTGTCCATTAGAGCAGCCATGGCCAGCTCCAGGCGAGGCCTCCTGCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380347.6 |
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| CDS CAA 90 bp | CTTCCTCCAGGGCCACTTTGGAAAACTGGCATCTCAGGGGCAGCTTaGGTATCTCCTTATGCCCTTCCCTCTCTGCCACCGCTCCTCATC | + |
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Preference number: 6 (lower is better) Translates to: LPPGPLWKTGISGAA*VSPYALPSLPPLLI Trigger: GATGAGGAGCGGTGGCAGAGAGGGAAGGGCATAAGGAGATACCAAAGCTGCCCCTGAGATGCCAGTTTTCCAAAGTGGCCCTGGAGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380347.6 |
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| CDS CAA 90 bp | GTCCATCCATCTTTCCTTCAAGGAGTTTCCAGAAGTGGAAGAAAGTaGGAGGGGAACAGAGACCTGAATTCAGGCCAATGGATGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: VHPSFLQGVSRSGRK*EGNRDLNSGQWMGG Trigger: TCCTCCCATCCATTGGCCTGAATTCAGGTCTCTGTTCCCCTCCAACTTTCTTCCACTTCTGGAAACTCCTTGAAGGAAAGATGGATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380347.6 |
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| CDS CCA 72 bp | GGTCCATCCATCTTTCCTTCAAGGAGTTTCCAGAAGTaGAAGAAAGTTGGAGGGGAACAGAGACCTGAATTC | + |
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Preference number: 6 (lower is better) Translates to: GPSIFPSRSFQK*KKVGGEQRPEF Trigger: GAATTCAGGTCTCTGTTCCCCTCCAACTTTCTTCCACTTCTGGAAACTCCTTGAAGGAAAGATGGATGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380347.6 |
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