Pregenerated sensors for GNRH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000147437Ensembl transcript IDs: ENST00000276414.4, ENST00000421054.7
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGAAGGACCAGTGCTGGCTaGAGCAGCCTTCCACGCACC | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGRTSAG*SSLPRT Trigger: GGTGCGTGGAAGGCTGCTCCAGCCAGCACTGGTCCT...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGATCGGAGGGGAGAACGTaGCTGGTGCGTGGTGCATTC | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGSEGRT*LVRGAF Trigger: GAATGCACCACGCACCAGCCACGTTCTCCCCTCCGA...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | TCATTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCGGAGGGGAGAACGTaGCTGGTGCGTGGTGCATTC | + |
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Preference number: 4 (lower is better) Translates to: SFTTQHFIMEYVQLGVRISEGRT*LVRGAF Trigger: GAATGCACCACGCACCAGCCACGTTCTCCCCTCCGA...AATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS-3UTR GCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTGGAGAACGTGGCTGGTaGGTGGTGCATTCGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISGERGW*VVHSKR Trigger: ACGCTTCGAATGCACCACGCACCAGCCACGTTCTCC...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR GCA 90 bp | TCATTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTGGAGAACGTGGCTGGTaGGTGGTGCATTCGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: SFTTQHFIMEYVQLGVRIGERGW*VVHSKR Trigger: ACGCTTCGAATGCACCACGCACCAGCCACGTTCTCC...AATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGAGGAGTCCCCAAAGCCTaGATCTCTGTGGCTGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGGVPKA*ISVAGD Trigger: ATCACCAGCCACAGAGATCCAGGCTTTGGGGACTCC...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGACTGGTCGATAAGCTGTaGGAGTCCCCAAAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGLVDKL*ESPKPG Trigger: TCCAGGCTTTGGGGACTCCCACAGCTTATCGACCAG...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATAACGTGGCTGGTGCGTaGTGCATTCGAAGCGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNNVAGA*CIRSVG Trigger: CCCAACGCTTCGAATGCACCACGCACCAGCCACGTT...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | TTCATTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATAACGTGGCTGGTGCGTaGTGCATTCGAAGCGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: FIHNTALYYGICATWCKDNVAGA*CIRSVG Trigger: CCCAACGCTTCGAATGCACCACGCACCAGCCACGTT...ATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTAGGGGAGAACGTGGCTaGTGCGTGGTGCATTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISRGERG*CVVHSK Trigger: CTTCGAATGCACCACGCACCAGCCACGTTCTCCCCT...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR GCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGTGGCTGGTGCGTGGTaGATTCGAAGCGTTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNVAGAW*IRSVGF Trigger: AAACCCAACGCTTCGAATGCACCACGCACCAGCCAC...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR GCA 90 bp | TTCATTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATGTGGCTGGTGCGTGGTaGATTCGAAGCGTTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: FIHNTALYYGICATWCKDVAGAW*IRSVGF Trigger: AAACCCAACGCTTCGAATGCACCACGCACCAGCCAC...ATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGAAAGCCTGGATCTCTGTaGCTGGTGATGGCAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGKPGSL*LVMART Trigger: TGTCCTTGCCATCACCAGCCACAGAGATCCAGGCTT...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR TCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTAGCATTACTGCTGGCTaGACCATCTGTGGGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISSITAG*TICGRE Trigger: CTCTCTCCCACAGATGGTTCAGCCAGCAGTAATGCT...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGATGGCTGAACCATCTGTaGGAGAGAGGACTCAACACT | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGWLNHL*ERGLNT Trigger: AGTGTTGAGTCCTCTCTCCCACAGATGGTTCAGCCA...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTCCTGGATTTAGCCCTTaGGCTGTCAAATGCCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISPGFSP*AVKCPV Trigger: TACAGGGCATTTGACAGCCCAAGGGCTAAATCCAGG...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR TCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTTGGGTTTCTGCCAGTTaGCCAACCTCTTTGACTATC | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISWVSAS*PTSLTI Trigger: GATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCA...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR TCA 90 bp | TCATTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTGGGTTTCTGCCAGTTaGCCAACCTCTTTGACTATC | + |
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Preference number: 4 (lower is better) Translates to: SFTTQHFIMEYVQLGVRIWVSAS*PTSLTI Trigger: GATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCA...AATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS-3UTR GCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTGAAGCGTTGGGTTTCTaGCAGTTGACCAACCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISEALGF*QLTNLF Trigger: AAAGAGGTTGGTCAACTGGCAGAAACCCAACGCTTC...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR GCA 90 bp | TTCATTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATGAAGCGTTGGGTTTCTaGCAGTTGACCAACCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FIHNTALYYGICATWCKDEALGF*QLTNLF Trigger: AAAGAGGTTGGTCAACTGGCAGAAACCCAACGCTTC...ATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS-3UTR TCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTATCCCAATCTTCCCTTaGAGTAGGTTGAGTACTGTG | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISIPIFP*SRLSTV Trigger: CACAGTACTCAACCTACTTCAAGGGAAGATTGGGAT...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR TCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATCCACTGGGGACAAAATaGGTACTTAAGCTCACATGT | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNPLGTK*VLKLTC Trigger: ACATGTGAGCTTAAGTACTCATTTTGTCCCCAGTGG...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR GCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGAAAACTCAGAGACACTTaGTGGCTTGCCTTTAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGKLRDT*WLAFSF Trigger: GAAACTAAAGGCAAGCCAGCAAGTGTCTCTGAGTTT...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR TCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGATTTACATACAGACACTaGAACTCAGAGACACTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGFTYRH*NSETLA Trigger: AGCAAGTGTCTCTGAGTTTCAGTGTCTGTATGTAAA...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR TCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATCCAGCTAGGAGTTTTTaGATTGGCTTCATTCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNPARSF*IGFILR Trigger: CCTTAGAATGAAGCCAATTCAAAAACTCCTAGCTGG...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR TCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGACCAGCTAGGAGTTTTTaGATTGGCTTCATTCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGPARSF*IGFILF Trigger: AAACAGAATGAAGCCAATTCAAAAACTCCTAGCTGG...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATTCCCCTGTTGTGGATTaGTCTTCAACTCTTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNSPVVD*SSTLSF Trigger: GAATGAAAGAGTTGAAGACCAATCCACAACAGGGGA...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CCA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGAACATTTCCCCTGTTGTaGATTGGTCTTCAACTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SELYLSHVSNGHSFWPNGTFPLL*IGLQLF Trigger: AAAGAGTTGAAGACCAATCCACAACAGGGGAAATGT...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR TCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGTTGACCAACCTCTTTaGCTATCTCTTGGAAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNVDQPL*LSLGKN Trigger: ATTCTTTCCAAGAGATAGTCAAAGAGGTTGGTCAAC...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR TCA 90 bp | TCATTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTGTTGACCAACCTCTTTaGCTATCTCTTGGAAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: SFTTQHFIMEYVQLGVRIVDQPL*LSLGKN Trigger: ATTCTTTCCAAGAGATAGTCAAAGAGGTTGGTCAAC...AATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATAAAATCCAGCTAGATTaGATTCCCTTGAGGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNKIQLD*IPLRKP Trigger: TGGTTTCCTCAAGGGAATCCAATCTAGCTGGATTTT...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTAATGGTGTATGTAATTaGAACACCCCCTGGTATATC | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISNGVCN*NTPWYI Trigger: GATATACCAGGGGGTGTTCCAATTACATACACCATT...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATTTGCTTGACATTACATaGCTACCCCATGGTACTAAT | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNLLDIT*LPHGTN Trigger: ATTAGTACCATGGGGTAGCCATGTAATGTCAAGCAA...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATAATGGTCATTCCTTCTaGCCCAATGGATTTAAATCT | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNNGHSF*PNGFKS Trigger: AGATTTAAATCCATTGGGCCAGAAGGAATGACCATT...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTAATGGTCATTCCTTCTaGCCCAATGGATTTAAATCT | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISNGHSF*PNGFKS Trigger: AGATTTAAATCCATTGGGCCAGAAGGAATGACCATT...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATCACAGCACTTTATTATaGAATATGTGCAACTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: MSELYLSHVSNGHSFWPNHSTLL*NMCNLV Trigger: CACCAAGTTGCACATATTCCATAATAAAGTGCTGTG...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CCA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTCACAGCACTTTATTATaGAATATGTGCAACTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: FTTQHFIMEYVQLGVRISHSTLL*NMCNLV Trigger: CACCAAGTTGCACATATTCCATAATAAAGTGCTGTG...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS CCA 90 bp | CCAGAGCTCCTTTCAGGTCTCGGAGGGGAGAACGTGGCTGGTGCGTaGTGCATTCGAAGCGTTGGGTTTCTGCCAGTTGACCAACCTCTT | + |
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Preference number: 5 (lower is better) Translates to: PELLSGLGGENVAGA*CIRSVGFLPVDQPL Trigger: AAGAGGTTGGTCAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCCCTCCGAGACCTGAAAGGAGCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS CCA 90 bp | AATCAGACTTTCCAGAGCTCCTTTCAGGTCTCGGAGGGGAGAACGTaGCTGGTGCGTGGTGCATTCGAAGCGTTGGGTTTCTGCCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: NQTFQSSFQVSEGRT*LVRGAFEALGFCQL Trigger: CAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCCCTCCGAGACCTGAAAGGAGCTCTGGAAAGTCTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS GCA 90 bp | GGGAGAACGTGGCTGGTGCGTGGTGCATTCGAAGCGTTGGGTTTCTaGCAGTTGACCAACCTCTTTGACTATCTCTTGGAAAGAATCAAT | + |
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Preference number: 5 (lower is better) Translates to: GRTWLVRGAFEALGF*QLTNLFDYLLERIN Trigger: ATTGATTCTTTCCAAGAGATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CAA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGAGGTGCATTCGAAGCGTaGGGTTTCTGCCAGTTGACC | + |
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Preference number: 5 (lower is better) Translates to: SELYLSHVSNGHSFWPNGGAFEA*GFCQLT Trigger: GGTCAACTGGCAGAAACCCAACGCTTCGAATGCACC...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CAA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGTGCATTCGAAGCGTaGGGTTTCTGCCAGTTGACC | + |
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Preference number: 5 (lower is better) Translates to: MSELYLSHVSNGHSFWPNGAFEA*GFCQLT Trigger: GGTCAACTGGCAGAAACCCAACGCTTCGAATGCACC...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CAA 90 bp | ATGTCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATCTAGATTGGATTCCCTaGAGGAAACCAGCAGACCTA | + |
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Preference number: 5 (lower is better) Translates to: MSELYLSHVSNGHSFWPNLDWIP*RKPADL Trigger: TAGGTCTGCTGGTTTCCTCAAGGGAATCCAATCTAG...ATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CAA 90 bp | TCAGAATTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTGGCCCAATGGATTGGGTTTCTGCCAGTaGACCAACCTCTTTGACTAT | + |
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Preference number: 5 (lower is better) Translates to: SELYLSHVSNGHSFWPNGLGFCQ*TNLFDY Trigger: ATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCAA...TCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAATTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS-3UTR CAA 90 bp | TTCATTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTGGGTTTCTGCCAGTaGACCAACCTCTTTGACTAT | + |
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Preference number: 5 (lower is better) Translates to: FIHNTALYYGICATWCKDLGFCQ*TNLFDY Trigger: ATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCAA...ATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS-3UTR CAA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTTTCCCCTGTTGTGGATaGGTCTTCAACTCTTTCATT | + |
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Preference number: 5 (lower is better) Translates to: FTTQHFIMEYVQLGVRISFPCCG*VFNSFI Trigger: AATGAAAGAGTTGAAGACCAATCCACAACAGGGGAA...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CAA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTAATTTTTCCAGGACATaGAAATCTTTCCTGCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: FTTQHFIMEYVQLGVRISNFSRT*KSFLLV Trigger: TACCAGCAGGAAAGATTTCAATGTCCTGGAAAAATT...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS-3UTR CAA 90 bp | TTCACAACACAGCACTTTATTATGGAATATGTGCAACTTGGTGTAAGGATTTCTCTAGGAGTTTTTGAATaGGCTTCATTCTGTTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: FTTQHFIMEYVQLGVRISLGVFE*ASFCLE Trigger: CTCTAAACAGAATGAAGCCAATTCAAAAACTCCTAG...AGAAATCCTTACACCAAGTTGCACATATTCCATAATAAAGTGCTGTGTTGTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421054.7 |
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| CDS GCA 72 bp | GCTCCTTTCAGGTCTCGGAGGGGAGAACGTGGCTGGTaGGTGGTGCATTCGAAGCGTTGGGTTTCTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: APFRSRRGERGW*VVHSKRWVSAS Trigger: ACTGGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCCCTCCGAGACCTGAAAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS CCA 72 bp | AGAGCTCCTTTCAGGTCTCGGAGGGGAGAACGTGGCTaGTGCGTGGTGCATTCGAAGCGTTGGGTTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RAPFRSRRGERG*CVVHSKRWVSA Trigger: GGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCCCTCCGAGACCTGAAAGGAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS GCA 72 bp | TCAGGTCTCGGAGGGGAGAACGTGGCTGGTGCGTGGTaGATTCGAAGCGTTGGGTTTCTGCCAGTTGACCAA | + |
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Preference number: 6 (lower is better) Translates to: SGLGGENVAGAW*IRSVGFLPVDQ Trigger: TTGGTCAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCCCTCCGAGACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS CCA 72 bp | CTTTCAGGTCTCGGAGGGGAGAACGTGGCTGGTGCGTaGTGCATTCGAAGCGTTGGGTTTCTGCCAGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LSGLGGENVAGA*CIRSVGFLPVD Trigger: GTCAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCCCTCCGAGACCTGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS CCA 72 bp | TTCCAGAGCTCCTTTCAGGTCTCGGAGGGGAGAACGTaGCTGGTGCGTGGTGCATTCGAAGCGTTGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FQSSFQVSEGRT*LVRGAFEALGF Trigger: GAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCCCTCCGAGACCTGAAAGGAGCTCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS CAA 90 bp | GTCTCGGAGGGGAGAACGTGGCTGGTGCGTGGTGCATTCGAAGCGTaGGGTTTCTGCCAGTTGACCAACCTCTTTGACTATCTCTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VSEGRTWLVRGAFEA*GFCQLTNLFDYLLE Trigger: TTCCAAGAGATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCCCTCCGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS CAA 72 bp | GGGAGAACGTGGCTGGTGCGTGGTGCATTCGAAGCGTaGGGTTTCTGCCAGTTGACCAACCTCTTTGACTAT | + |
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Preference number: 6 (lower is better) Translates to: GRTWLVRGAFEA*GFCQLTNLFDY Trigger: ATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCACGTTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS GCA 72 bp | TGGCTGGTGCGTGGTGCATTCGAAGCGTTGGGTTTCTaGCAGTTGACCAACCTCTTTGACTATCTCTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: WLVRGAFEALGF*QLTNLFDYLLE Trigger: TTCCAAGAGATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCACCAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS CAA 72 bp | GTGCGTGGTGCATTCGAAGCGTTGGGTTTCTGCCAGTaGACCAACCTCTTTGACTATCTCTTGGAAAGAATC | + |
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Preference number: 6 (lower is better) Translates to: VRGAFEALGFCQ*TNLFDYLLERI Trigger: GATTCTTTCCAAGAGATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS TCA 72 bp | TGCGTGGTGCATTCGAAGCGTTGGGTTTCTGCCAGTTaGCCAACCTCTTTGACTATCTCTTGGAAAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: CVVHSKRWVSAS*PTSLTISWKES Trigger: TGATTCTTTCCAAGAGATAGTCAAAGAGGTTGGTCAACTGGCAGAAACCCAACGCTTCGAATGCACCACGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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| CDS TCA 72 bp | TATTTATCCTTCAGTCTTCCTAGCATTACTGCTGGCTaGACCATCTGTGGGAGAGAGGACTCAACACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: YLSFSLPSITAG*TICGREDSTLF Trigger: GAACAGTGTTGAGTCCTCTCTCCCACAGATGGTTCAGCCAGCAGTAATGCTAGGAAGACTGAAGGATAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS CCA 72 bp | TTTTACATACAGACACTGAAACTCAGAGACACTTGCTaGCTTGCCTTTAGTTTCTTAGCCACTGGGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: FYIQTLKLRDTC*LAFSFLATGDK Trigger: TTTGTCCCCAGTGGCTAAGAAACTAAAGGCAAGCCAGCAAGTGTCTCTGAGTTTCAGTGTCTGTATGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS CAA 72 bp | TTCAAAGAGATTAAAATCCAGCTAGATTGGATTCCCTaGAGGAAACCAGCAGACCTATCAAGAGTTCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: FKEIKIQLDWIP*RKPADLSRVQG Trigger: TCCTTGAACTCTTGATAGGTCTGCTGGTTTCCTCAAGGGAATCCAATCTAGCTGGATTTTAATCTCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276414.4 |
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| CDS CCA 72 bp | TTATACTTAAGTCATGTTAGTAATGGTCATTCCTTCTaGCCCAATGGATTTAAATCTTCTTCTGCCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LYLSHVSNGHSF*PNGFKSSSAQF Trigger: AAACTGGGCAGAAGAAGATTTAAATCCATTGGGCCAGAAGGAATGACCATTACTAACATGACTTAAGTATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000276414.4 ENST00000421054.7 |
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