RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNPDA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163281

Ensembl transcript IDs: ENST00000295448.8, ENST00000507534.5, ENST00000507917.5, ENST00000509756.1, ENST00000511187.1, ENST00000608855.1, ENST00000609092.5

Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAAGCATTCCATTCACTAGTCCTGCAACTGCTCAACAGCCTACTTaGAGGTCACCTGAAACTTCATGTCCAGTAGGAGAGGGGACAACA +
Preference number: 1 (lower is better)
Translates to: GSIPFTSPATAQQPT*RSPETSCPVGEGTT
Trigger: TGTTGTCCCCTCTCCTACTGGACATGAAGTTTCAGGTGACCTTCAAGTAGGCTGTTGAGCAGTTGCAGGACTAGTGAATGGAATGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 90 bp ACATGGGAGGGTGGGGAAAGGCACTTAATGCGGTTTTGCAGGAAATaGGATTACTGGATTGGAGAGATAGGTTGCTTGTTAGTAAACAGA +
Preference number: 1 (lower is better)
Translates to: TWEGGERHLMRFCRK*DYWIGEIGCLLVNR
Trigger: TCTGTTTACTAACAAGCAACCTATCTCTCCAATCCAGTAATCCCATTTCCTGCAAAACCGCATTAAGTGCCTTTCCCCACCCTCCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 90 bp GGTGGGGAAAGGCACTTAATGCGGTTTTGCAGGAAATGGGATTACTaGATTGGAGAGATAGGTTGCTTGTTAGTAAACAGATGTTCCTTG +
Preference number: 1 (lower is better)
Translates to: GGERHLMRFCRKWDY*IGEIGCLLVNRCSL
Trigger: CAAGGAACATCTGTTTACTAACAAGCAACCTATCTCTCCAATCCAGTAATCCCATTTCCTGCAAAACCGCATTAAGTGCCTTTCCCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 90 bp GGAAAGGCACTTAATGCGGTTTTGCAGGAAATGGGATTACTGGATTaGAGAGATAGGTTGCTTGTTAGTAAACAGATGTTCCTTGTCAGA +
Preference number: 1 (lower is better)
Translates to: GKALNAVLQEMGLLD*RDRLLVSKQMFLVR
Trigger: TCTGACAAGGAACATCTGTTTACTAACAAGCAACCTATCTCTCCAATCCAGTAATCCCATTTCCTGCAAAACCGCATTAAGTGCCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 90 bp ATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCTTaGGAAATAGCTGATCTTCCAGTTACTCCTGTTTTAATGCCTCAG +
Preference number: 1 (lower is better)
Translates to: IGTYTCRLLLAMEAA*EIADLPVTPVLMPQ
Trigger: CTGAGGCATTAAAACAGGAGTAACTGGAAGATCAGCTATTTCCCAAGCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR TCA 90 bp ATGTCTAAATTCTGTCTTCATATTGAAGGAGGTATCCTAACAGGCTaGTACCCTGAAACCTCTTCAGAAATACAGACAGCTCCAAAGTGG +
Preference number: 1 (lower is better)
Translates to: MSKFCLHIEGGILTG*YPETSSEIQTAPKW
Trigger: CCACTTTGGAGCTGTCTGTATTTCTGAAGAGGTTTCAGGGTATCAGCCTGTTAGGATACCTCCTTCAATATGAAGACAGAATTTAGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR TCA 90 bp TACTTGCAGACTGCTCTTAGCTATGGAAGCTGCTTGGGAAATAGCTaGTCTTCCAGTTACTCCTGTTTTAATGCCTCAGTACTATATTTC +
Preference number: 1 (lower is better)
Translates to: YLQTALSYGSCLGNS*SSSYSCFNASVLYF
Trigger: GAAATATAGTACTGAGGCATTAAAACAGGAGTAACTGGAAGATCAGCTATTTCCCAAGCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR GCA 90 bp TCTGAGGTGAGAACTTTCCATTACTTGAAAGAACTAGCTATGTGTTaGCACTTTTCAATAGGTCACAGTGTGAGATTTAACCCCACAGTC +
Preference number: 1 (lower is better)
Translates to: SEVRTFHYLKELAMC*HFSIGHSVRFNPTV
Trigger: GACTGTGGGGTTAAATCTCACACTGTGACCTATTGAAAAGTGGCAACACATAGCTAGTTCTTTCAAGTAATGGAAAGTTCTCACCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR TCA 90 bp TCTGGTCAGCACTTTTTAGTGATGACAGAAGAAAGGGTAGTGATGTaGATGGAATTTGAAGAGTTATGGATGACAATTATAGGAATTTAC +
Preference number: 1 (lower is better)
Translates to: SGQHFLVMTEERVVM*MEFEELWMTIIGIY
Trigger: GTAAATTCCTATAATTGTCATCCATAACTCTTCAAATTCCATTCACATCACTACCCTTTCTTCTGTCATCACTAAAAAGTGCTGACCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR TCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATGGTGCTGTAGGAAGATaGCTAAGGCAACCACGTGCA +
Preference number: 2 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHGAVGR*LRQPRA
Trigger: TGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACC...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR TCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTATAGCCAGTCAATCTTaGGAGCCAGCTACTTCTCTT +
Preference number: 2 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGIASQS*EPATSL
Trigger: AAGAGAAGTAGCTGGCTCTCAAGATTGACTGGCTAT...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR TCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAATAGCCAGTCAATCTTaGGAGCCAGCTACTTCTCTT +
Preference number: 2 (lower is better)
Translates to: EIYATGVISQMVPDVDTLIASQS*EPATSL
Trigger: AAGAGAAGTAGCTGGCTCTCAAGATTGACTGGCTAT...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR CCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAAGAGTCATATCACAAATaGTGCCTGATGTGGACACTC +
Preference number: 2 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKESYHK*CLMWTL
Trigger: GAGTGTCCACATCAGGCACCATTTGTGATATGACTC...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR CCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCAAGAACATGGGAGGGTaGGGAAAGGCACTTAATGCG +
Preference number: 2 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCKNMGG*GKALNA
Trigger: CGCATTAAGTGCCTTTCCCCACCCTCCCATGTTCTT...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CAA 90 bp CGGTTTTGCAGGAAATGGGATTACTGGATTGGAGAGATAGGTTGCTaGTTAGTAAACAGATGTTCCTTGTCAGAAAGGCTGCAAAAAGGA +
Preference number: 2 (lower is better)
Translates to: RFCRKWDYWIGEIGC*LVNRCSLSERLQKG
Trigger: TCCTTTTTGCAGCCTTTCTGACAAGGAACATCTGTTTACTAACAAGCAACCTATCTCTCCAATCCAGTAATCCCATTTCCTGCAAAACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR TCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATATCACAAATGGTGCCTaGTGTGGACACTCTACCTTT +
Preference number: 2 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHITNGA*CGHSTF
Trigger: AAAGGTAGAGTGTCCACATCAGGCACCATTTGTGAT...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR TCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTTCCAAAAGAATTTCCTaGAGTGGCTTGCTAGGTATA +
Preference number: 2 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGSKRIS*SGLLGI
Trigger: TATACCTAGCAAGCCACTTCAGGAAATTCTTTTGGA...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR TCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCGTGAGGAAGAGGGATTaGGGTGGGACTAGTAAACAT +
Preference number: 2 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCVRKRD*GGTSKH
Trigger: ATGTTTACTAGTCCCACCTCAATCCCTCTTCCTCAC...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR GCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTTTGATGTCTAGATGGTaGTGTAGGAAGATGACTAAG +
Preference number: 2 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGLMSRW*CRKMTK
Trigger: CTTAGTCATCTTCCTACAGCACCATCTAGACATCAA...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR GCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTTTGTTGGGAGTCGAATaGATGTATTCTTCAGGTTCA +
Preference number: 2 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGLLGVE*MYSSGS
Trigger: TGAACCTGAAGAATACATGCATTCGACTCCCAACAA...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR GCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCGTCCTCTTGATGCAGTaGAGCTATCCTCTCACGAAT +
Preference number: 2 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCVLLMQ*SYPLTN
Trigger: ATTCGTGAGAGGATAGCTGCACTGCATCAAGAGGAC...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATGAGTCATATCACAAATaGTGCCTGATGTGGACACTC +
Preference number: 2 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHESYHK*CLMWTL
Trigger: GAGTGTCCACATCAGGCACCATTTGTGATATGACTC...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR TCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAAATTGCATTCCAAAAGTaGAGGTCTGCAATGATAGTT +
Preference number: 2 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKIAFQK*RSAMIV
Trigger: AACTATCATTGCAGACCTTCACTTTTGGAATGCAAT...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR TCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCATGCACCAGACTTCCTaGAACGTTACCAGAAGAAAG +
Preference number: 2 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCMHQTS*NVTRRK
Trigger: CTTTCTTCTGGTAACGTTTCAGGAAGTCTGGTGCAT...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAATGCTGTTTTATAGGTaGCTATGTGACTTCAGTACT +
Preference number: 2 (lower is better)
Translates to: EIYATGVISQMVPDVDTLMLFYR*LCDFST
Trigger: AGTACTGAAGTCACATAGCCACCTATAAAACAGCAT...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR CAA 90 bp GAAAGACCCACTTTTAAGGGACAAGCAAAGAGTACTGGGAAGTGTTaGTGTAGTAGGAGAAATTCTAACCATAAGAATGGGACTCTAAAG +
Preference number: 2 (lower is better)
Translates to: ERPTFKGQAKSTGKC*CSRRNSNHKNGTLK
Trigger: CTTTAGAGTCCCATTCTTATGGTTAGAATTTCTCCTACTACACAAACACTTCCCAGTACTCTTTGCTTGTCCCTTAAAAGTGGGTCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR TCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATGTAACAAACCCAAAATaGATGCAGGTTCACATGTAC +
Preference number: 2 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHVTNPK*MQVHMY
Trigger: GTACATGTGAACCTGCATTCATTTTGGGTTTGTTAC...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR GCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAACCAAAAGTGAAGGTCTaGAATGATAGTTTGTTATCT +
Preference number: 2 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKPKVKV*NDSLLS
Trigger: AGATAACAAACTATCATTGCAGACCTTCACTTTTGG...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR GCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCAGAACTAGCTATGTGTTaGCACTTTTCAATAGGTCAC +
Preference number: 2 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAELAMC*HFSIGH
Trigger: GTGACCTATTGAAAAGTGGCAACACATAGCTAGTTC...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCAGGAAATGGGATTACTaGATTGGAGAGATAGGTTGC +
Preference number: 2 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCRKWDY*IGEIGC
Trigger: GCAACCTATCTCTCCAATCCAGTAATCCCATTTCCT...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR TCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGAACAGGCTGATACCCTaGAACCTCTTCAGAAATACA +
Preference number: 2 (lower is better)
Translates to: CKMRPICSPECLNSVFILNRLIP*NLFRNT
Trigger: TGTATTTCTGAAGAGGTTTCAGGGTATCAGCCTGTT...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR TCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCATTCTGTCTTCATATTaGAGGAGGTATCCTAACAGG +
Preference number: 2 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCILSSY*RRYPNR
Trigger: CCTGTTAGGATACCTCCTTCAATATGAAGACAGAAT...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR GCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGCTCTGCCCAAATATGTaGTGTATGACTTTGGGTAAG +
Preference number: 2 (lower is better)
Translates to: CKMRPICSPECLNSVFILLCPNM*CMTLGK
Trigger: CTTACCCAAAGTCATACAGCACATATTTGGGCAGAG...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR GCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGTCTATTACCCAGCTCTaGCCAAATATGTGCTGTATG +
Preference number: 2 (lower is better)
Translates to: CKMRPICSPECLNSVFILSITQL*PNMCCM
Trigger: CATACAGCACATATTTGGGCAGAGCTGGGTAATAGA...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATATGCTGTTTTATAGGTaGCTATGTGACTTCAGTACT +
Preference number: 2 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHMLFYR*LCDFST
Trigger: AGTACTGAAGTCACATAGCCACCTATAAAACAGCAT...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR TCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCATTTGGGATGAAATCTaGAGGGTTACATGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCIWDEI*RVTWEN
Trigger: ATTTTCCCATGTAACCCTTCAGATTTCATCCCAAAT...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR GCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATCAAACCCAAAATGAATaGAGGTTCACATGTACTATA +
Preference number: 2 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHQTQNE*RFTCTI
Trigger: TATAGTACATGTGAACCTGCATTCATTTTGGGTTTG...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR-3UTR CCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGGTACAGGGATTTATCTaGGACTTAATGAGGACTAGA +
Preference number: 2 (lower is better)
Translates to: CKMRPICSPECLNSVFILVQGFI*DLMRTR
Trigger: TCTAGTCCTCATTAAGTCCCAGATAAATCCCTGTAC...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAACAGACAGCTCCAAAGTaGAAAATACTGTGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKQTAPK*KILCPL
Trigger: AAGAGGACACAGTATTTTCCACTTTGGAGCTGTCTG...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAAATCAACATGAAGTCTaGGCAATCAAACTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKNQHEV*AIKLLL
Trigger: AAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATT...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CAA 90 bp ACTACTTTGAAGATACTATTATCTGAGGTGAGAACTTTCCATTACTaGAAAGAACTAGCTATGTGTTGCCACTTTTCAATAGGTCACAGT +
Preference number: 2 (lower is better)
Translates to: TTLKILLSEVRTFHY*KELAMCCHFSIGHS
Trigger: ACTGTGACCTATTGAAAAGTGGCAACACATAGCTAGTTCTTTCAAGTAATGGAAAGTTCTCACCTCAGATAATAGTATCTTCAAAGTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAACTATCCTCTCACGAATaGTCTGTTTCAAAATTTTTC +
Preference number: 2 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKLSSHE*SVSKFF
Trigger: GAAAAATTTTGAAACAGACCATTCGTGAGAGGATAG...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR TCA 72 bp CCATTCACTAGTCCTGCAACTGCTCAACAGCCTACTTaGAGGTCACCTGAAACTTCATGTCCAGTAGGAGAG +
Preference number: 3 (lower is better)
Translates to: PFTSPATAQQPT*RSPETSCPVGE
Trigger: CTCTCCTACTGGACATGAAGTTTCAGGTGACCTTCAAGTAGGCTGTTGAGCAGTTGCAGGACTAGTGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR GCA 72 bp AGTTCCTCTACTAGACTCCAGCCAGGGGCTCAGAACTaGTGTCTCACTCTTAATACATTACCCTATCCATTC +
Preference number: 3 (lower is better)
Translates to: SSSTRLQPGAQN*CLTLNTLPYPF
Trigger: GAATGGATAGGGTAATGTATTAAGAGTGAGACAGCAGTTCTGAGCCCCTGGCTGGAGTCTAGTAGAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 72 bp GGTGGGGAAAGGCACTTAATGCGGTTTTGCAGGAAATaGGATTACTGGATTGGAGAGATAGGTTGCTTGTTA +
Preference number: 3 (lower is better)
Translates to: GGERHLMRFCRK*DYWIGEIGCLL
Trigger: TAACAAGCAACCTATCTCTCCAATCCAGTAATCCCATTTCCTGCAAAACCGCATTAAGTGCCTTTCCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CAA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTAATAGCCAGTCAATCTaGAGAGCCAGCTACTTCTCT +
Preference number: 3 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGNSQSI*RASYFS
Trigger: AGAGAAGTAGCTGGCTCTCAAGATTGACTGGCTATT...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
3UTR CCA 72 bp CCTGAAACCTCTTCAGAAATACAGACAGCTCCAAAGTaGAAAATACTGTGTCCTCTTGATGCAGTGCAGCTA +
Preference number: 3 (lower is better)
Translates to: PETSSEIQTAPK*KILCPLDAVQL
Trigger: TAGCTGCACTGCATCAAGAGGACACAGTATTTTCCACTTTGGAGCTGTCTGTATTTCTGAAGAGGTTTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 72 bp GAGTTAAGTTTTCCAGGTATTAAGAACATGGGAGGGTaGGGAAAGGCACTTAATGCGGTTTTGCAGGAAATG +
Preference number: 3 (lower is better)
Translates to: ELSFPGIKNMGG*GKALNAVLQEM
Trigger: CATTTCCTGCAAAACCGCATTAAGTGCCTTTCCCCACCCTCCCATGTTCTTAATACCTGGAAAACTTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR GCA 72 bp GGGAATTCAAGCCCAAACTGTAGCAAACTTCTTTCTTaGCTTCGAAGCACAGCTATCGGTAATTCCAGTTAT +
Preference number: 3 (lower is better)
Translates to: GNSSPNCSKLLS*LRSTAIGNSSY
Trigger: ATAACTGGAATTACCGATAGCTGTGCTTCGAAGGCAAGAAAGAAGTTTGCTACAGTTTGGGCTTGAATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608855.1
3UTR TCA 72 bp TTTCTATTACCCAGCTCTGCCCAAATATGTGCTGTATaGCTTTGGGTAAGTAGCTTAACGTCTCTGTCTGTT +
Preference number: 3 (lower is better)
Translates to: FLLPSSAQICAV*LWVSSLTSLSV
Trigger: AACAGACAGAGACGTTAAGCTACTTACCCAAAGTCATACAGCACATATTTGGGCAGAGCTGGGTAATAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR TCA 72 bp TTCTGTCTTCATATTGAAGGAGGTATCCTAACAGGCTaGTACCCTGAAACCTCTTCAGAAATACAGACAGCT +
Preference number: 3 (lower is better)
Translates to: FCLHIEGGILTG*YPETSSEIQTA
Trigger: AGCTGTCTGTATTTCTGAAGAGGTTTCAGGGTATCAGCCTGTTAGGATACCTCCTTCAATATGAAGACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 72 bp AGGCACTTAATGCGGTTTTGCAGGAAATGGGATTACTaGATTGGAGAGATAGGTTGCTTGTTAGTAAACAGA +
Preference number: 3 (lower is better)
Translates to: RHLMRFCRKWDY*IGEIGCLLVNR
Trigger: TCTGTTTACTAACAAGCAACCTATCTCTCCAATCCAGTAATCCCATTTCCTGCAAAACCGCATTAAGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 72 bp TATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCTTaGGAAATAGCTGATCTTCCAGTTACTCCTGTTTTA +
Preference number: 3 (lower is better)
Translates to: YTCRLLLAMEAA*EIADLPVTPVL
Trigger: TAAAACAGGAGTAACTGGAAGATCAGCTATTTCCCAAGCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CAA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCAAATACTGTGTCCTCTaGATGCAGTGCAGCTATCCT +
Preference number: 3 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCKYCVL*MQCSYP
Trigger: AGGATAGCTGCACTGCATCAAGAGGACACAGTATTT...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CAA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCGCACTTAATGCGGTTTaGCAGGAAATGGGATTACTG +
Preference number: 3 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCALNAV*QEMGLL
Trigger: CAGTAATCCCATTTCCTGCAAAACCGCATTAAGTGC...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 72 bp TGTCCTCTTGATGCAGTGCAGCTATCCTCTCACGAATaGTCTGTTTCAAAATTTTTCAGAAGAGCTTACAAT +
Preference number: 3 (lower is better)
Translates to: CPLDAVQLSSHE*SVSKFFRRAYN
Trigger: ATTGTAAGCTCTTCTGAAAAATTTTGAAACAGACCATTCGTGAGAGGATAGCTGCACTGCATCAAGAGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CCA 72 bp CTTAATGCGGTTTTGCAGGAAATGGGATTACTGGATTaGAGAGATAGGTTGCTTGTTAGTAAACAGATGTTC +
Preference number: 3 (lower is better)
Translates to: LNAVLQEMGLLD*RDRLLVSKQMF
Trigger: GAACATCTGTTTACTAACAAGCAACCTATCTCTCCAATCCAGTAATCCCATTTCCTGCAAAACCGCATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CAA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGGAGATCAGCCTGATTTaGATTTCTATTACCCAGCTC +
Preference number: 3 (lower is better)
Translates to: CKMRPICSPECLNSVFILEISLI*ISITQL
Trigger: GAGCTGGGTAATAGAAATCAAAATCAGGCTGATCTC...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CAA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGAGAATAGGTTCTACATaGGGTATAGGCAAAATGTCC +
Preference number: 3 (lower is better)
Translates to: CKMRPICSPECLNSVFILRIGST*GIGKMS
Trigger: GGACATTTTGCCTATACCCAATGTAGAACCTATTCT...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CAA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAAGAACTAGCTATGTGTaGCCACTTTTCAATAGGTCA +
Preference number: 3 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKRTSYV*PLFNRS
Trigger: TGACCTATTGAAAAGTGGCAACACATAGCTAGTTCT...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR-3UTR CAA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAGACTATTTTCAGTGCTaGCCAAATGTCAGTTATTTG +
Preference number: 3 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKDYFQC*PNVSYL
Trigger: CAAATAACTGACATTTGGCAAGCACTGAAAATAGTC...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR TCA 72 bp CTTGTAGTCAAGGAATCTATTATTTGGGATGAAATCTaGAGGGTTACATGGGAAAATAGAGTTAAAACTCCA +
Preference number: 3 (lower is better)
Translates to: LVVKESIIWDEI*RVTWENRVKTP
Trigger: TGGAGTTTTAACTCTATTTTCCCATGTAACCCTTCAGATTTCATCCCAAATAATAGATTCCTTGACTACAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAGAGAGCGACCCCAGCTaGCCAGTGGAGCGCGAATCC +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKESDPS*PVERES
Trigger: GGATTCGCGCTCCACTGGTCAGCTGGGGTCGCTCTC...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507917.5
3UTR CAA 72 bp AACATGGGAGGGTGGGGAAAGGCACTTAATGCGGTTTaGCAGGAAATGGGATTACTGGATTGGAGAGATAGG +
Preference number: 4 (lower is better)
Translates to: NMGGWGKALNAV*QEMGLLDWRDR
Trigger: CCTATCTCTCCAATCCAGTAATCCCATTTCCTGCAAAACCGCATTAAGTGCCTTTCCCCACCCTCCCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTACAAGCCTCATTACGGTaGCGCACAGCTTCCAGAACA +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLQASLR*RTASRT
Trigger: TGTTCTGGAAGCTGTGCGTCACCGTAATGAGGCTTG...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAGGTGCTGTAGGAAGATaGCTAAGGCAACCACGTGCA +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLGAVGR*LRQPRA
Trigger: TGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACC...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAAATAGTCCGGGGATGCTaGTGGAAAGCGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKIVRGC*WKAETV
Trigger: GACTGTTTCCGCTTTCCAGCAGCATCCCCGGACTAT...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAATAGTCCGGGGATGCTaGTGGAAAGCGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLIVRGC*WKAETV
Trigger: GACTGTTTCCGCTTTCCAGCAGCATCCCCGGACTAT...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTCCAATGGTTCTTCGATaGTGGAACAGCGGGAACAAG +
Preference number: 4 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGPMVLR*WNSGNK
Trigger: CTTGTTCCCGCTGTTCCAGCATCGAAGAACCATTGG...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAAACCGGCAGACCCAATaGTTCTTCGATGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLNRQTQ*FFDAGT
Trigger: TGTTCCAGCATCGAAGAACCATTGGGTCTGCCGGTT...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATCAAGCCTCATTACGGTaGCGCACAGCTTCCAGAACA +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHQASLR*RTASRT
Trigger: TGTTCTGGAAGCTGTGCGTCACCGTAATGAGGCTTG...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAATGGATCCAGGCTCATTaGAAGCGATATGACCATCTG +
Preference number: 4 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKWIQAH*KRYDHL
Trigger: CAGATGGTCATATCGCTTTCAATGAGCCTGGATCCA...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAAAAATAGTCCGGGGATaGTGCTGGAAAGCGGAAACA +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLKIVRG*CWKAET
Trigger: TGTTTCCGCTTTCCAGCAGCATCCCCGGACTATTTT...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp GGAATTCAAGCCCAAACTGTAGCAAACTTCTTTCTTGCCTTCGAAGCACAGCTAAAAATAGTCCGGGGATaGTGCTGGAAAGCGGAAACA +
Preference number: 4 (lower is better)
Translates to: GIQAQTVANFFLAFEAQLKIVRG*CWKAET
Trigger: TGTTTCCGCTTTCCAGCAGCATCCCCGGACTATTTT...TAGCTGTGCTTCGAAGGCAAGAAAGAAGTTTGCTACAGTTTGGGCTTGAATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608855.1
CDS-3UTR TCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTATCACAAATGGTGCCTaGTGTGGACACTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGITNGA*CGHSTF
Trigger: AAAGGTAGAGTGTCCACATCAGGCACCATTTGTGAT...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAGGTGCTGTAGGAAGATaGCTAAGGCAACCACGTGCA +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKGAVGR*LRQPRA
Trigger: TGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACC...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATCCAATGGTTCTTCGATaGTGGAACAGCGGGAACAAG +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHPMVLR*WNSGNK
Trigger: CTTGTTCCCGCTGTTCCAGCATCGAAGAACCATTGG...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTATTTGTACAGGGCAAATaGCTTGTGTGCCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLFVQGK*LVCPCY
Trigger: ATAACAGGGGCACACAAGGCATTTGCCCTGTACAAA...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAATAGTCCGGGGATGCTaGTGGAAAGCGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKIVRGC*WKAETV
Trigger: GACTGTTTCCGCTTTCCAGCAGCATCCCCGGACTAT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR GCA 90 bp GGGAATTCAAGCCCAAACTGTAGCAAACTTCTTTCTTGCCTTCGAAGCACAGCTAGCAAACTTCTTTCTTaGCTTCGAAGCACAGCTATC +
Preference number: 4 (lower is better)
Translates to: GNSSPNCSKLLSCLRSTASKLLS*LRSTAI
Trigger: GATAGCTGTGCTTCGAAGGCAAGAAAGAAGTTTGCT...AGCTGTGCTTCGAAGGCAAGAAAGAAGTTTGCTACAGTTTGGGCTTGAATTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608855.1
CDS-3UTR CCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATAACCGGCAGACCCAATaGTTCTTCGATGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHNRQTQ*FFDAGT
Trigger: TGTTCCAGCATCGAAGAACCATTGGGTCTGCCGGTT...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAGAGTCATATCACAAATaGTGCCTGATGTGGACACTC +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLESYHK*CLMWTL
Trigger: GAGTGTCCACATCAGGCACCATTTGTGATATGACTC...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATCCCGGCAGACCCAATaGTTCTTCGATGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKSRQTQ*FFDAGT
Trigger: TGTTCCAGCATCGAAGAACCATTGGGTCTGCCGGGA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507534.5
CDS-3UTR CCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCACAGGTATTAAGAACATaGGAGGGTGGGGAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAQVLRT*EGGERH
Trigger: GTGCCTTTCCCCACCCTCCCATGTTCTTAATACCTG...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CAA 72 bp GACAAAAGCCTGCATACTCCAGAGATCAGCCTGATTTaGATTTCTATTACCCAGCTCTGCCCAAATATGTGC +
Preference number: 4 (lower is better)
Translates to: DKSLHTPEISLI*ISITQLCPNMC
Trigger: GCACATATTTGGGCAGAGCTGGGTAATAGAAATCAAAATCAGGCTGATCTCTGGAGTATGCAGGCTTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGCAAGCCTCATTACGGTaGCGCACAGCTTCCAGAACA +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILQASLR*RTASRT
Trigger: TGTTCTGGAAGCTGTGCGTCACCGTAATGAGGCTTG...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAATGTCCAGGTTTGAACTaGATGATGCGATTACAGATG +
Preference number: 4 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKCPGLN*MMRLQM
Trigger: CATCTGTAATCGCATCATTCAGTTCAAACCTGGACA...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCATGGATCCAGGCTCATTaGAAGCGATATGACCATCTG +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAWIQAH*KRYDHL
Trigger: CAGATGGTCATATCGCTTTCAATGAGCCTGGATCCA...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTCAGTCCACATGTGATTaGCTCCTTCTTCTATTGCTT +
Preference number: 4 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGQSTCD*LLLLLL
Trigger: AAGCAATAGAAGAAGGAGTCAATCACATGTGGACTG...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp AATTCAAGCCCAAACTGTAGCAAACTTCTTTCTTGCCTTCGAAGCACAGCTATCACCCTTGCACAGAATTaGGAAGGTAGTTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: NSSPNCSKLLSCLRSTAITLAQN*EGSSPE
Trigger: TTCAGGAGAACTACCTTCTCAATTCTGTGCAAGGGT...GATAGCTGTGCTTCGAAGGCAAGAAAGAAGTTTGCTACAGTTTGGGCTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608855.1
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAACCAATGGTTCTTCGATaGTGGAACAGCGGGAACAAG +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKPMVLR*WNSGNK
Trigger: CTTGTTCCCGCTGTTCCAGCATCGAAGAACCATTGG...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR GCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCCCAATGGTTCTTCGATaGTGGAACAGCGGGAACAAG +
Preference number: 4 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCPMVLR*WNSGNK
Trigger: CTTGTTCCCGCTGTTCCAGCATCGAAGAACCATTGG...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAAGACTCCTTCTTCTATTaGTTTGTACAGGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKDSFFY*FVQGKC
Trigger: GCATTTGCCCTGTACAAAGCAATAGAAGAAGGAGTC...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAGACTCCTTCTTCTATTaGTTTGTACAGGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLDSFFY*FVQGKC
Trigger: GCATTTGCCCTGTACAAAGCAATAGAAGAAGGAGTC...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp AACTTCTTTCTTGCCTTCGAAGCACAGCTATCGGTAATTCCAGTTATAAATAAGATAGTCCGGGGATGCTaGTGGAAAGCGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: NFFLAFEAQLSVIPVINKIVRGC*WKAETV
Trigger: GACTGTTTCCGCTTTCCAGCAGCATCCCCGGACTAT...CTTATTTATAACTGGAATTACCGATAGCTGTGCTTCGAAGGCAAGAAAGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608855.1
CDS-3UTR GCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCAAAAATAGTCCGGGGATaGTGCTGGAAAGCGGAAACA +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAKIVRG*CWKAET
Trigger: TGTTTCCGCTTTCCAGCAGCATCCCCGGACTATTTT...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTATCATATCACAAATGGTaGCTGATGTGGACACTCTAC +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLSYHKW*LMWTLY
Trigger: GTAGAGTGTCCACATCAGGCACCATTTGTGATATGA...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATATGGTTCTTCGATGCTaGAACAGCGGGAACAAGCAA +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHMVLRC*NSGNKQ
Trigger: TTGCTTGTTCCCGCTGTTCCAGCATCGAAGAACCAT...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTAGCGATATGACCATCTaGACCAATTCCTCCAACAAA +
Preference number: 4 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGSDMTI*TNSSNK
Trigger: TTTGTTGGAGGAATTGGTCCAGATGGTCATATCGCT...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTATGGCATTTGCCAAGATaGTATCCATTGCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLWHLPR*YPLLES
Trigger: AGACTCTAGCAATGGATACCATCTTGGCAAATGCCA...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATGGATCCAGGCTCATTaGAAGCGATATGACCATCTG +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKWIQAH*KRYDHL
Trigger: CAGATGGTCATATCGCTTTCAATGAGCCTGGATCCA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR TCA 90 bp GGAATTCAAGCCCAAACTGTAGCAAACTTCTTTCTTGCCTTCGAAGCACAGCTAGAAACAGTCCACATGTaGTTGACTCCTTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: GIQAQTVANFFLAFEAQLETVHM*LTPSSI
Trigger: AATAGAAGAAGGAGTCAATCACATGTGGACTGTTTC...TAGCTGTGCTTCGAAGGCAAGAAAGAAGTTTGCTACAGTTTGGGCTTGAATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608855.1
CDS-3UTR TCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTGTAACAAACCCAAAATaGATGCAGGTTCACATGTAC +
Preference number: 4 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGVTNPK*MQVHMY
Trigger: GTACATGTGAACCTGCATTCATTTTGGGTTTGTTAC...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCATTTGTACAGGGCAAATaGCTTGTGTGCCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAFVQGK*LVCPCY
Trigger: ATAACAGGGGCACACAAGGCATTTGCCCTGTACAAA...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAATAGTCCGGGGATGCTaGTGGAAAGCGGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKIVRGC*WKAETV
Trigger: GACTGTTTCCGCTTTCCAGCAGCATCCCCGGACTAT...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAAAAATAGTCCGGGGATaGTGCTGGAAAGCGGAAACA +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKKIVRG*CWKAET
Trigger: TGTTTCCGCTTTCCAGCAGCATCCCCGGACTATTTT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR GCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTATTGATGTCTAGATGGTaGTGTAGGAAGATGACTAAG +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLLMSRW*CRKMTK
Trigger: CTTAGTCATCTTCCTACAGCACCATCTAGACATCAA...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAATGGTTCTTCGATGCTaGAACAGCGGGAACAAGCAA +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKMVLRC*NSGNKQ
Trigger: TTGCTTGTTCCCGCTGTTCCAGCATCGAAGAACCAT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
3UTR CAA 72 bp AGGAAATGGGATTACTGGATTGGAGAGATAGGTTGCTaGTTAGTAAACAGATGTTCCTTGTCAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RKWDYWIGEIGC*LVNRCSLSERL
Trigger: CAGCCTTTCTGACAAGGAACATCTGTTTACTAACAAGCAACCTATCTCTCCAATCCAGTAATCCCATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCATGTCCAGGTTTGAACTaGATGATGCGATTACAGATG +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLACPGLN*MMRLQM
Trigger: CATCTGTAATCGCATCATTCAGTTCAAACCTGGACA...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATTCATTGAAAGCGATATaGCCATCTGGACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHSLKAI*PSGPIP
Trigger: AGGAATTGGTCCAGATGGTCATATCGCTTTCAATGA...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCACAGTCCACATGTGATTaGCTCCTTCTTCTATTGCTT +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAQSTCD*LLLLLL
Trigger: AAGCAATAGAAGAAGGAGTCAATCACATGTGGACTG...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTTTCCATCTTTCATACTaGATAGTGGATCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGFHLSY*IVDPQV
Trigger: AACTTGTGGATCCACTATTCAGTATGAAAGATGGAA...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAATAGCCAGTCAATCTTaGGAGCCAGCTACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKIASQS*EPATSL
Trigger: AAGAGAAGTAGCTGGCTCTCAAGATTGACTGGCTAT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAATCACAAATGGTGCCTaGTGTGGACACTCTACCTTT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKITNGA*CGHSTF
Trigger: AAAGGTAGAGTGTCCACATCAGGCACCATTTGTGAT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTATTGCATTCCAAAAGTaGAGGTCTGCAATGATAGTT +
Preference number: 4 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGIAFQK*RSAMIV
Trigger: AACTATCATTGCAGACCTTCACTTTTGGAATGCAAT...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGGGTATCCTAACAGGCTaGTACCCTGAAACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILGILTG*YPETSS
Trigger: TGAAGAGGTTTCAGGGTATCAGCCTGTTAGGATACC...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGGCTCAACAGCCTACTTaGAGGTCACCTGAAACTTCA +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILAQQPT*RSPETS
Trigger: TGAAGTTTCAGGTGACCTTCAAGTAGGCTGTTGAGC...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAACAGATGTATTTGGCTaGCCATTCACTAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKTDVFG*PFTSQV
Trigger: GACTTGGCTAGTGAATGGGCAGCCAAATACATCTGT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAACCCGTCAAGGATATGTaGATTATTAGGATCTATATC +
Preference number: 4 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKPVKDM*IIRIYI
Trigger: GATATAGATCCTAATAATGCACATATCCTTGACGGG...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATTTGTACAGGGCAAATaGCTTGTGTGCCCCTGTTAT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKFVQGK*LVCPCY
Trigger: ATAACAGGGGCACACAAGGCATTTGCCCTGTACAAA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR GCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAATTCAAGCTGAATTTTaGTCCAGTCTCCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLIQAEF*SSLLQF
Trigger: AAACTGAAGGAGACTGGAGCAAAATTCAGCTTGAAT...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATTCATATCACAAATGGTaGCTGATGTGGACACTCTAC +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHSYHKW*LMWTLY
Trigger: GTAGAGTGTCCACATCAGGCACCATTTGTGATATGA...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGATGGTTCTTCGATGCTaGAACAGCGGGAACAAGCAA +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILMVLRC*NSGNKQ
Trigger: TTGCTTGTTCCCGCTGTTCCAGCATCGAAGAACCAT...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAAATGCTGTTTTATAGGTaGCTATGTGACTTCAGTACT +
Preference number: 4 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKMLFYR*LCDFST
Trigger: AGTACTGAAGTCACATAGCCACCTATAAAACAGCAT...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTTTTTTGATGTCTAGATaGTGCTGTAGGAAGATGACT +
Preference number: 4 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGFLMSR*CCRKMT
Trigger: AGTCATCTTCCTACAGCACCATCTAGACATCAAAAA...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp GAAATATACGCCACTGGAGTCATATCACAAATGGTGCCTGATGTGGACACTCTAAAGAATTTCCTGAAGTaGCTTGCTAGGTATAAAGCT +
Preference number: 4 (lower is better)
Translates to: EIYATGVISQMVPDVDTLKNFLK*LARYKA
Trigger: AGCTTTATACCTAGCAAGCCACTTCAGGAAATTCTT...TAGAGTGTCCACATCAGGCACCATTTGTGATATGACTCCAGTGGCGTATATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCACAGACAGCTCCAAAGTaGAAAATACTGTGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAQTAPK*KILCPL
Trigger: AAGAGGACACAGTATTTTCCACTTTGGAGCTGTCTG...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAAAGAACATGGGAGGGTaGGGAAAGGCACTTAATGCG +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKKNMGG*GKALNA
Trigger: CGCATTAAGTGCCTTTCCCCACCCTCCCATGTTCTT...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATCATTGAAAGCGATATaGCCATCTGGACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKSLKAI*PSGPIP
Trigger: AGGAATTGGTCCAGATGGTCATATCGCTTTCAATGA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAACAGTCCACATGTGATTaGCTCCTTCTTCTATTGCTT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKQSTCD*LLLLLL
Trigger: AAGCAATAGAAGAAGGAGTCAATCACATGTGGACTG...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR TCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATGAAACAGTCCACATGTaGTTGACTCCTTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHETVHM*LTPSSI
Trigger: AATAGAAGAAGGAGTCAATCACATGTGGACTGTTTC...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAGTGAGGAAGAGGGATTaGGGTGGGACTAGTAAACAT +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKVRKRD*GGTSKH
Trigger: ATGTTTACTAGTCCCACCTCAATCCCTCTTCCTCAC...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGTACTTGAAGGTCACCTaGAACTTCATGTCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILYLKVT*NFMSSR
Trigger: CCTACTGGACATGAAGTTTCAGGTGACCTTCAAGTA...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAAAAAATATTTGGCATTTaGCAAGATGGTATCCATTGC +
Preference number: 4 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKKIFGI*QDGIHC
Trigger: GCAATGGATACCATCTTGGCAAATGCCAAATATTTT...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAGACTCCTTCTTCTATTaGTTTGTACAGGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKDSFFY*FVQGKC
Trigger: GCATTTGCCCTGTACAAAGCAATAGAAGAAGGAGTC...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR GCA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTCCAAAAGTGAAGGTCTaGAATGATAGTTTGTTATCT +
Preference number: 4 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGPKVKV*NDSLLS
Trigger: AGATAACAAACTATCATTGCAGACCTTCACTTTTGG...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATTTGATGTCTAGATGGTaGTGTAGGAAGATGACTAAG +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHLMSRW*CRKMTK
Trigger: CTTAGTCATCTTCCTACAGCACCATCTAGACATCAA...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATTTGTTGGGAGTCGAATaGATGTATTCTTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHLLGVE*MYSSGS
Trigger: TGAACCTGAAGAATACATGCATTCGACTCCCAACAA...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAACAAACCCAAAATGAATaGAGGTTCACATGTACTATA +
Preference number: 4 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKQTQNE*RFTCTI
Trigger: TATAGTACATGTGAACCTGCATTCATTTTGGGTTTG...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCCTCTGCCCAAATATGTaGTGTATGACTTTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCLCPNM*CMTLGK
Trigger: CTTACCCAAAGTCATACAGCACATATTTGGGCAGAG...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAGTCCTCTTGATGCAGTaGAGCTATCCTCTCACGAAT +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKVLLMQ*SYPLTN
Trigger: ATTCGTGAGAGGATAGCTGCACTGCATCAAGAGGAC...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCACCTTGTCAGAAAGGCTaGAAAAAGGACTCTAAAATC +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAPCQKG*KKDSKI
Trigger: GATTTTAGAGTCCTTTTTGCAGCCTTTCTGACAAGG...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAACCAGGGGCTCAGAACTaGTGTCTCACTCTTAATACA +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKPGAQN*CLTLNT
Trigger: TGTATTAAGAGTGAGACAGCAGTTCTGAGCCCCTGG...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAAGCGATATGACCATCTaGACCAATTCCTCCAACAAA +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKSDMTI*TNSSNK
Trigger: TTTGTTGGAGGAATTGGTCCAGATGGTCATATCGCT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCAGCGATATGACCATCTaGACCAATTCCTCCAACAAA +
Preference number: 4 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCSDMTI*TNSSNK
Trigger: TTTGTTGGAGGAATTGGTCCAGATGGTCATATCGCT...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATGGCATTTGCCAAGATaGTATCCATTGCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKWHLPR*YPLLES
Trigger: AGACTCTAGCAATGGATACCATCTTGGCAAATGCCA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCTGGCATTTGCCAAGATaGTATCCATTGCTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCWHLPR*YPLLES
Trigger: AGACTCTAGCAATGGATACCATCTTGGCAAATGCCA...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGGCTATGGAAGCTGCTTaGGAAATAGCTGATCTTCCA +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILAMEAA*EIADLP
Trigger: TGGAAGATCAGCTATTTCCCAAGCAGCTTCCATAGC...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGTCATTGAAAGCGATATaGCCATCTGGACCAATTCCT +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILSLKAI*PSGPIP
Trigger: AGGAATTGGTCCAGATGGTCATATCGCTTTCAATGA...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAGAAACAGTCCACATGTaGTTGACTCCTTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKETVHM*LTPSSI
Trigger: AATAGAAGAAGGAGTCAATCACATGTGGACTGTTTC...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR TCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATATTGCATTCCAAAAGTaGAGGTCTGCAATGATAGTT +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHIAFQK*RSAMIV
Trigger: AACTATCATTGCAGACCTTCACTTTTGGAATGCAAT...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATCCAAAAGAATTTCCTaGAGTGGCTTGCTAGGTATA +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKSKRIS*SGLLGI
Trigger: TATACCTAGCAAGCCACTTCAGGAAATTCTTTTGGA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAGTAACAAACCCAAAATaGATGCAGGTTCACATGTAC +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKVTNPK*MQVHMY
Trigger: GTACATGTGAACCTGCATTCATTTTGGGTTTGTTAC...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR TCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCAATTTGGGATGAAATCTaGAGGGTTACATGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAIWDEI*RVTWEN
Trigger: ATTTTCCCATGTAACCCTTCAGATTTCATCCCAAAT...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGGACTCCTTCTTCTATTaGTTTGTACAGGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILDSFFY*FVQGKC
Trigger: GCATTTGCCCTGTACAAAGCAATAGAAGAAGGAGTC...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATATTCAAGCTGAATTTTaGTCCAGTCTCCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHIQAEF*SSLLQF
Trigger: AAACTGAAGGAGACTGGAGCAAAATTCAGCTTGAAT...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATTGTTGGGAGTCGAATaGATGTATTCTTCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKLLGVE*MYSSGS
Trigger: TGAACCTGAAGAATACATGCATTCGACTCCCAACAA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR GCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCGAACTAGCTATGTGTTaGCACTTTTCAATAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCELAMC*HFSIGH
Trigger: GTGACCTATTGAAAAGTGGCAACACATAGCTAGTTC...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATTTTTTGATGTCTAGATaGTGCTGTAGGAAGATGACT +
Preference number: 4 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHFLMSR*CCRKMT
Trigger: AGTCATCTTCCTACAGCACCATCTAGACATCAAAAA...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGAGGAAATGGGATTACTaGATTGGAGAGATAGGTTGC +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILRKWDY*IGEIGC
Trigger: GCAACCTATCTCTCCAATCCAGTAATCCCATTTCCT...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
3UTR CAA 72 bp ACTTTTAAGGGACAAGCAAAGAGTACTGGGAAGTGTTaGTGTAGTAGGAGAAATTCTAACCATAAGAATGGG +
Preference number: 4 (lower is better)
Translates to: TFKGQAKSTGKC*CSRRNSNHKNG
Trigger: CCCATTCTTATGGTTAGAATTTCTCCTACTACACAAACACTTCCCAGTACTCTTTGCTTGTCCCTTAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATTCCATCTTTCATACTaGATAGTGGATCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKFHLSY*IVDPQV
Trigger: AACTTGTGGATCCACTATTCAGTATGAAAGATGGAA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR TCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAATCTCAGTCGGCTTTTaGAATTCAGTGCTCACCTTT +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKISVGF*NSVLTF
Trigger: AAAGGTGAGCACTGAATTTCAAAAGCCGACTGAGAT...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCTTACAAATTCTACACTaGGGGAGGGTTACTAAAACA +
Preference number: 4 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCLQILH*GRVTKT
Trigger: TGTTTTAGTAACCCTCCCTCAGTGTAGAATTTGTAA...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAACCCGTCAAGGATATGTaGATTATTAGGATCTATATC +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKPVKDM*IIRIYI
Trigger: GATATAGATCCTAATAATGCACATATCCTTGACGGG...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR GCA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCCCCGTCAAGGATATGTaGATTATTAGGATCTATATC +
Preference number: 4 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCPVKDM*IIRIYI
Trigger: GATATAGATCCTAATAATGCACATATCCTTGACGGG...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAATTCAAGCTGAATTTTaGTCCAGTCTCCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKIQAEF*SSLLQF
Trigger: AAACTGAAGGAGACTGGAGCAAAATTCAGCTTGAAT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR GCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGGGGCAATCAAACTCCTaGTTACTTGCAGAGTTTATT +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILGQSNS*LLAEFI
Trigger: AATAAACTCTGCAAGTAAGCAGGAGTTTGATTGCCC...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAATCTATTACCCAGCTCTaGCCAAATATGTGCTGTATG +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKSITQL*PNMCCM
Trigger: CATACAGCACATATTTGGGCAGAGCTGGGTAATAGA...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAATGCTGTTTTATAGGTaGCTATGTGACTTCAGTACT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKMLFYR*LCDFST
Trigger: AGTACTGAAGTCACATAGCCACCTATAAAACAGCAT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAAAGAATTTCCTGAAGTaGCTTGCTAGGTATAAAGCT +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKKNFLK*LARYKA
Trigger: AGCTTTATACCTAGCAAGCCACTTCAGGAAATTCTT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGAATCAACATGAAGTCTaGGCAATCAAACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILNQHEV*AIKLLL
Trigger: AAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATT...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCACTATCCTCTCACGAATaGTCTGTTTCAAAATTTTTC +
Preference number: 4 (lower is better)
Translates to: GKRKINMKSGQSNSCLLALSSHE*SVSKFF
Trigger: GAAAAATTTTGAAACAGACCATTCGTGAGAGGATAG...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAGAAACAGTCCACATGTaGTTGACTCCTTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKETVHM*LTPSSI
Trigger: AATAGAAGAAGGAGTCAATCACATGTGGACTGTTTC...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAACTAAAATCCCAGCTTTaGGAAAGACCCACTTTTAAG +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKLKSQL*ERPTFK
Trigger: CTTAAAAGTGGGTCTTTCTCAAAGCTGGGATTTTAG...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAAAAATATTTGGCATTTaGCAAGATGGTATCCATTGC +
Preference number: 4 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKKIFGI*QDGIHC
Trigger: GCAATGGATACCATCTTGGCAAATGCCAAATATTTT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR GCA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGATTGGTACATATACTTaGAGACTGCTCTTAGCTATG +
Preference number: 4 (lower is better)
Translates to: CKMRPICSPECLNSVFILIGTYT*RLLLAM
Trigger: CATAGCTAAGAGCAGTCTGCAAGTATATGTACCAAT...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAGTACAGGGATTTATCTaGGACTTAATGAGGACTAGA +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKVQGFI*DLMRTR
Trigger: TCTAGTCCTCATTAAGTCCCAGATAAATCCCTGTAC...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAATGGGATTACTGGATTaGAGAGATAGGTTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKMGLLD*RDRLLV
Trigger: AACAAGCAACCTATCTCTCCAATCCAGTAATCCCAT...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAACAAATATGTGCTGTATaGCTTTGGGTAAGTAGCTTA +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKQICAV*LWVSSL
Trigger: TAAGCTACTTACCCAAAGTCATACAGCACATATTTG...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAGGTTTTGACTCAAAATaGACTCATTCTACCTTTGTC +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKGFDSK*THSTFV
Trigger: GACAAAGGTAGAATGAGTTCATTTTGAGTCAAAACC...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR TCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAATGGAGGGTAAAGAAATaGGTTAAGTTTTCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKWRVKK*VKFSRY
Trigger: ATACCTGGAAAACTTAACTCATTTCTTTACCCTCCA...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR GCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAAAAATATTTGGCATTTaGCAAGATGGTATCCATTGC +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKKIFGI*QDGIHC
Trigger: GCAATGGATACCATCTTGGCAAATGCCAAATATTTT...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
34% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CCA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAAACCCTTTAAGATTCTaGTCAGCACTTTTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKNPLRF*SALFSD
Trigger: ATCACTAAAAAGTGCTGACCAGAATCTTAAAGGGTT...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS CCA 90 bp TTCCAGAACAAGTTCAAACCGGCAGACCCAATGGTTCTTCGATGCTaGAACAGCGGGAACAAGCAACACCCAACCACCCGAGAGCGACCC +
Preference number: 5 (lower is better)
Translates to: FQNKFKPADPMVLRC*NSGNKQHPTTRERP
Trigger: GGGTCGCTCTCGGGTGGTTGGGTGTTGCTTGTTCCCGCTGTTCCAGCATCGAAGAACCATTGGGTCTGCCGGTTTGAACTTGTTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507917.5
ENST00000509756.1
CDS GCA 90 bp AGCTTCCAGAACAAGTTCAAACCGGCAGACCCAATGGTTCTTCGATaGTGGAACAGCGGGAACAAGCAACACCCAACCACCCGAGAGCGA +
Preference number: 5 (lower is better)
Translates to: SFQNKFKPADPMVLR*WNSGNKQHPTTRER
Trigger: TCGCTCTCGGGTGGTTGGGTGTTGCTTGTTCCCGCTGTTCCAGCATCGAAGAACCATTGGGTCTGCCGGTTTGAACTTGTTCTGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507917.5
ENST00000509756.1
CDS-3UTR CAA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTTACAGGGCAAATGCCTaGTGTGCCCCTGTTATAAGG +
Preference number: 5 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGYRANA*CAPVIR
Trigger: CCTTATAACAGGGGCACACAAGGCATTTGCCCTGTA...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAAAATAGCCAGTCAATCTaGAGAGCCAGCTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKNSQSI*RASYFS
Trigger: AGAGAAGTAGCTGGCTCTCAAGATTGACTGGCTATT...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS TCA 90 bp GTTGGTAAACCCAGTGTAAAATATCTGTCCTGTCCAGGTTTGAACTaGATGATGCGATTACAGATGTATTTGGCTGCCCATTCACTAGCC +
Preference number: 5 (lower is better)
Translates to: VGKPSVKYLSCPGLN*MMRLQMYLAAHSLA
Trigger: GGCTAGTGAATGGGCAGCCAAATACATCTGTAATCGCATCATTCAGTTCAAACCTGGACAGGACAGATATTTTACACTGGGTTTACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507917.5
ENST00000509756.1
CDS-3UTR CAA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATCGATTACAGATGTATTaGGCTGCCCATTCACTAGCC +
Preference number: 5 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHRLQMY*AAHSLA
Trigger: GGCTAGTGAATGGGCAGCCAAATACATCTGTAATCG...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATACAGGGCAAATGCCTaGTGTGCCCCTGTTATAAGG +
Preference number: 5 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKYRANA*CAPVIR
Trigger: CCTTATAACAGGGGCACACAAGGCATTTGCCCTGTA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CAA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCTACAGGGCAAATGCCTaGTGTGCCCCTGTTATAAGG +
Preference number: 5 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCYRANA*CAPVIR
Trigger: CCTTATAACAGGGGCACACAAGGCATTTGCCCTGTA...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTGGATCCACAAGTTTATaGTGCACATGCATTAGACCT +
Preference number: 5 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGGSTSL*CTCIRP
Trigger: AGGTCTAATGCATGTGCACAATAAACTTGTGGATCC...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAACGATTACAGATGTATTaGGCTGCCCATTCACTAGCC +
Preference number: 5 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKRLQMY*AAHSLA
Trigger: GGCTAGTGAATGGGCAGCCAAATACATCTGTAATCG...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTTCTTTAATCTTGTCCTaGACACTAAACTGGATCCAG +
Preference number: 5 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGSLILS*TLNWIQ
Trigger: CTGGATCCAGTTTAGTGTCAAGGACAAGATTAAAGA...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTCTAGAGTCTTTAATCTaGTCCTTGACACTAAACTGG +
Preference number: 5 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGLESLI*SLTLNW
Trigger: CCAGTTTAGTGTCAAGGACAAGATTAAAGACTCTAG...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp TTGATGTCTAGATGGTGCTGTAGGAAGATGACTAAGGCAACCACGTGCAGAAAACCAAGATGGTATCCATaGCTAGAGTCTTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: LMSRWCCRKMTKATTCRKPRWYP*LESLIL
Trigger: CAAGATTAAAGACTCTAGCAATGGATACCATCTTGG...TTTTCTGCACGTGGTTGCCTTAGTCATCTTCCTACAGCACCATCTAGACATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTTTTCAGGATGATTTCTaGGAAGTCCTGTTGGTAAAC +
Preference number: 5 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGFQDDF*EVLLVN
Trigger: GTTTACCAACAGGACTTCCAAGAAATCATCCTGAAA...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507917.5
CDS TCA 90 bp GAGTCTTTAATCTTGTCCTTGACACTAAACTGGATCCAGGCTCATTaGAAGCGATATGACCATCTGGACCAATTCCTCCAACAAAAAGAT +
Preference number: 5 (lower is better)
Translates to: ESLILSLTLNWIQAH*KRYDHLDQFLQQKD
Trigger: ATCTTTTTGTTGGAGGAATTGGTCCAGATGGTCATATCGCTTTCAATGAGCCTGGATCCAGTTTAGTGTCAAGGACAAGATTAAAGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
ENST00000509756.1
CDS GCA 90 bp CTGTCCAGGTTTGAACTGAATGATGCGATTACAGATGTATTTGGCTaGCCATTCACTAGCCAAGTCATAGTTATCAAGAATTACAAGCCT +
Preference number: 5 (lower is better)
Translates to: LSRFELNDAITDVFG*PFTSQVIVIKNYKP
Trigger: AGGCTTGTAATTCTTGATAACTATGACTTGGCTAGTGAATGGGCAGCCAAATACATCTGTAATCGCATCATTCAGTTCAAACCTGGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507917.5
ENST00000509756.1
CDS-3UTR CAA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGCGATTACAGATGTATTaGGCTGCCCATTCACTAGCC +
Preference number: 5 (lower is better)
Translates to: CKMRPICSPECLNSVFILRLQMY*AAHSLA
Trigger: GGCTAGTGAATGGGCAGCCAAATACATCTGTAATCG...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp CTCCCCACAGAGGCAAAGACATCTTTTAACCTAACTCTCCTAATGCATGATGGTCAAAATATTTGGCATTaGCCAAGATGGTATCCATTG +
Preference number: 5 (lower is better)
Translates to: LPTEAKTSFNLTLLMHDGQNIWH*PRWYPL
Trigger: CAATGGATACCATCTTGGCAAATGCCAAATATTTTG...ACCATCATGCATTAGGAGAGTTAGGTTAAAAGATGTCTTTGCCTCTGTGGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATGGATCCACAAGTTTATaGTGCACATGCATTAGACCT +
Preference number: 5 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHGSTSL*CTCIRP
Trigger: AGGTCTAATGCATGTGCACAATAAACTTGTGGATCC...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAAATAGCCAGTCAATCTaGAGAGCCAGCTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKNSQSI*RASYFS
Trigger: AGAGAAGTAGCTGGCTCTCAAGATTGACTGGCTATT...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CAA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATCTAGAGTCTTTAATCTaGTCCTTGACACTAAACTGG +
Preference number: 5 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHLESLI*SLTLNW
Trigger: CCAGTTTAGTGTCAAGGACAAGATTAAAGACTCTAG...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCACCAAGATGGTATCCATaGCTAGAGTCTTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: GKRKINMKSGQSNSCLLAPRWYP*LESLIL
Trigger: CAAGATTAAAGACTCTAGCAATGGATACCATCTTGG...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAAGGATCCACAAGTTTATaGTGCACATGCATTAGACCT +
Preference number: 5 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKGSTSL*CTCIRP
Trigger: AGGTCTAATGCATGTGCACAATAAACTTGTGGATCC...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CAA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCGAGATCAGCCTGATTTaGATTTCTATTACCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCEISLI*ISITQL
Trigger: GAGCTGGGTAATAGAAATCAAAATCAGGCTGATCTC...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCGGAGAGATAGGTTGCTaGTTAGTAAACAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCGEIGC*LVNRCS
Trigger: GGAACATCTGTTTACTAACAAGCAACCTATCTCTCC...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCAAGTCTATGTTGATATaGATCCTCTGGCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCKSMLI*ILWQFL
Trigger: GAGGAACTGCCAGAGGATCAATATCAACATAGACTT...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAATCTTTAATCTTGTCCTaGACACTAAACTGGATCCAG +
Preference number: 5 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKSLILS*TLNWIQ
Trigger: CTGGATCCAGTTTAGTGTCAAGGACAAGATTAAAGA...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CAA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAACTAGAGTCTTTAATCTaGTCCTTGACACTAAACTGG +
Preference number: 5 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKLESLI*SLTLNW
Trigger: CCAGTTTAGTGTCAAGGACAAGATTAAAGACTCTAG...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CAA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAACCAAGATGGTATCCATaGCTAGAGTCTTTAATCTTG +
Preference number: 5 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKPRWYP*LESLIL
Trigger: CAAGATTAAAGACTCTAGCAATGGATACCATCTTGG...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CAA 90 bp AAGGCTTCTTCTACCAGGTGGGCTTATGAAATGCAAAATAAGCAAAAGGAGCATCAAAATATTTGGCATTaGCCAAGATGGTATCCATTG +
Preference number: 5 (lower is better)
Translates to: KASSTRWAYEMQNKQKEHQNIWH*PRWYPL
Trigger: CAATGGATACCATCTTGGCAAATGCCAAATATTTTG...ATGCTCCTTTTGCTTATTTTGCATTTCATAAGCCCACCTGGTAGAAGAAGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295448.8
ENST00000507917.5
CDS-3UTR CAA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCAGAATAGGTTCTACATaGGGTATAGGCAAAATGTCC +
Preference number: 5 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCRIGST*GIGKMS
Trigger: GGACATTTTGCCTATACCCAATGTAGAACCTATTCT...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp GGAAAAAGGAAAATCAACATGAAGTCTGGGCAATCAAACTCCTGCTTACTTGCAGACTATTTTCAGTGCTaGCCAAATGTCAGTTATTTG +
Preference number: 5 (lower is better)
Translates to: GKRKINMKSGQSNSCLLADYFQC*PNVSYL
Trigger: CAAATAACTGACATTTGGCAAGCACTGAAAATAGTC...TGCAAGTAAGCAGGAGTTTGATTGCCCAGACTTCATGTTGATTTTCCTTTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp TCATTTTGTAATTGGTACATATACTTGCAGACTGCTCTTAGCTATGGAAGCTGCGATTGGAGAGATAGGTaGCTTGTTAGTAAACAGATG +
Preference number: 5 (lower is better)
Translates to: SFCNWYIYLQTALSYGSCDWRDR*LVSKQM
Trigger: CATCTGTTTACTAACAAGCAACCTATCTCTCCAATC...GCAGCTTCCATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATTACAAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAAGCACTTAATGCGGTTTaGCAGGAAATGGGATTACTG +
Preference number: 5 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKALNAV*QEMGLL
Trigger: CAGTAATCCCATTTCCTGCAAAACCGCATTAAGTGC...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGCTAGAGTCTTTAATCTaGTCCTTGACACTAAACTGG +
Preference number: 5 (lower is better)
Translates to: CKMRPICSPECLNSVFILLESLI*SLTLNW
Trigger: CCAGTTTAGTGTCAAGGACAAGATTAAAGACTCTAG...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp CCAGTCAATCTTGAGAGCCAGCTACTTCTCTTAAACCCAAGTACAAGATATAAACAAAATATTTGGCATTaGCCAAGATGGTATCCATTG +
Preference number: 5 (lower is better)
Translates to: PVNLESQLLLLNPSTRYKQNIWH*PRWYPL
Trigger: CAATGGATACCATCTTGGCAAATGCCAAATATTTTG...TTTATATCTTGTACTTGGGTTTAAGAGAAGTAGCTGGCTCTCAAGATTGACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
CDS-3UTR CAA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAATATCTCAGTCGGCTTTaGAAATTCAGTGCTCACCTT +
Preference number: 5 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKYLSRL*KFSAHL
Trigger: AAGGTGAGCACTGAATTTCAAAAGCCGACTGAGATA...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGAGAACTAGCTATGTGTaGCCACTTTTCAATAGGTCA +
Preference number: 5 (lower is better)
Translates to: CKMRPICSPECLNSVFILRTSYV*PLFNRS
Trigger: TGACCTATTGAAAAGTGGCAACACATAGCTAGTTCT...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp TGTAAAATGAGGCCCATATGTAGCCCAGAATGTCTAAATTCTGTCTTCATATTGAATTGGTACATATACTaGCAGACTGCTCTTAGCTAT +
Preference number: 5 (lower is better)
Translates to: CKMRPICSPECLNSVFILNWYIY*QTALSY
Trigger: ATAGCTAAGAGCAGTCTGCAAGTATATGTACCAATT...CAATATGAAGACAGAATTTAGACATTCTGGGCTACATATGGGCCTCATTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS-3UTR CAA 90 bp AAAATGAACTCATTCTACCTTTGTCAAACTACTGAGGTGGAGCCTAAATACAAACAAAATATTTGGCATTaGCCAAGATGGTATCCATTG +
Preference number: 5 (lower is better)
Translates to: KMNSFYLCQTTEVEPKYKQNIWH*PRWYPL
Trigger: CAATGGATACCATCTTGGCAAATGCCAAATATTTTG...TTTGTATTTAGGCTCCACCTCAGTAGTTTGACAAAGGTAGAATGAGTTCATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509756.1
CDS TCA 72 bp ACAAGCAACACCCAACCACCCGAGAGCGACCCCAGCTaGCCAGTGGAGCGCGAATCCCACGGACCCGGATGC +
Preference number: 6 (lower is better)
Translates to: TSNTQPPESDPS*PVERESHGPGC
Trigger: GCATCCGGGTCCGTGGGATTCGCGCTCCACTGGTCAGCTGGGGTCGCTCTCGGGTGGTTGGGTGTTGCTTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511187.1
CDS CCA 72 bp GGATCATTACCGGCAGACCCAATGGTTCTTCGATGCTaGAACAGCGGGAACAAGCAACACCCAACCACCCGA +
Preference number: 6 (lower is better)
Translates to: GSLPADPMVLRC*NSGNKQHPTTR
Trigger: TCGGGTGGTTGGGTGTTGCTTGTTCCCGCTGTTCCAGCATCGAAGAACCATTGGGTCTGCCGGTAATGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511187.1
CDS CCA 72 bp AAGTTCAAACCGGCAGACCCAATGGTTCTTCGATGCTaGAACAGCGGGAACAAGCAACACCCAACCACCCGA +
Preference number: 6 (lower is better)
Translates to: KFKPADPMVLRC*NSGNKQHPTTR
Trigger: TCGGGTGGTTGGGTGTTGCTTGTTCCCGCTGTTCCAGCATCGAAGAACCATTGGGTCTGCCGGTTTGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507917.5
ENST00000509756.1
CDS GCA 72 bp AACAAGTTCAAACCGGCAGACCCAATGGTTCTTCGATaGTGGAACAGCGGGAACAAGCAACACCCAACCACC +
Preference number: 6 (lower is better)
Translates to: NKFKPADPMVLR*WNSGNKQHPTT
Trigger: GGTGGTTGGGTGTTGCTTGTTCCCGCTGTTCCAGCATCGAAGAACCATTGGGTCTGCCGGTTTGAACTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507917.5
ENST00000509756.1
CDS TCA 72 bp AGTCATAGTTATCAAGAATTACAAGCCTCATTACGGTaGCGCACAGCTTCCAGAACAAGTTCAAACCGGCAG +
Preference number: 6 (lower is better)
Translates to: SHSYQELQASLR*RTASRTSSNRQ
Trigger: CTGCCGGTTTGAACTTGTTCTGGAAGCTGTGCGTCACCGTAATGAGGCTTGTAATTCTTGATAACTATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507917.5
ENST00000509756.1
CDS TCA 72 bp ATCTTGTCCTTGACACTAAACTGGATCCAGGCTCATTaGAAGCGATATGACCATCTGGACCAATTCCTCCAA +
Preference number: 6 (lower is better)
Translates to: ILSLTLNWIQAH*KRYDHLDQFLQ
Trigger: TTGGAGGAATTGGTCCAGATGGTCATATCGCTTTCAATGAGCCTGGATCCAGTTTAGTGTCAAGGACAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
ENST00000509756.1
CDS TCA 72 bp TCTTTCTTGCCTTCGAAGCACAGCCTTGCACAGAATTaGGAAGGTAGTTCTCCTGAATTAACTTGTGGTAGC +
Preference number: 6 (lower is better)
Translates to: SFLPSKHSLAQN*EGSSPELTCGS
Trigger: GCTACCACAAGTTAATTCAGGAGAACTACCTTCTCAATTCTGTGCAAGGCTGTGCTTCGAAGGCAAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609092.5
CDS TCA 72 bp CCCAGTGTAAAATATCTGTCCTGTCCAGGTTTGAACTaGATGATGCGATTACAGATGTATTTGGCTGCCCAT +
Preference number: 6 (lower is better)
Translates to: PSVKYLSCPGLN*MMRLQMYLAAH
Trigger: ATGGGCAGCCAAATACATCTGTAATCGCATCATTCAGTTCAAACCTGGACAGGACAGATATTTTACACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507917.5
ENST00000509756.1
CDS TCA 72 bp GACACTAAACTGGATCCAGGCTCATTGAAAGCGATATaGCCATCTGGACCAATTCCTCCAACAAAAAGATCT +
Preference number: 6 (lower is better)
Translates to: DTKLDPGSLKAI*PSGPIPPTKRS
Trigger: AGATCTTTTTGTTGGAGGAATTGGTCCAGATGGTCATATCGCTTTCAATGAGCCTGGATCCAGTTTAGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295448.8
ENST00000507534.5
ENST00000507917.5
ENST00000509756.1
CDS TCA 72 bp ACAGAAGTGCAACTGAAACTCACCCTTGCACAGAATTaGGAAGGTAGTTCTCCTGAATTAACTTGTGGTAGC +
Preference number: 6 (lower is better)
Translates to: TEVQLKLTLAQN*EGSSPELTCGS
Trigger: GCTACCACAAGTTAATTCAGGAGAACTACCTTCTCAATTCTGTGCAAGGGTGAGTTTCAGTTGCACTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608855.1
CDS GCA 72 bp TTTGAACTGAATGATGCGATTACAGATGTATTTGGCTaGCCATTCACTAGCCAAGTCATAGTTATCAAGAAT +
Preference number: 6 (lower is better)
Translates to: FELNDAITDVFG*PFTSQVIVIKN
Trigger: ATTCTTGATAACTATGACTTGGCTAGTGAATGGGCAGCCAAATACATCTGTAATCGCATCATTCAGTTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295448.8
ENST00000507917.5
ENST00000509756.1