RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNPAT (Homo sapiens)

Ensembl gene IDs: ENSG00000116906

Ensembl transcript IDs: ENST00000366647.9, ENST00000416000.1, ENST00000436239.5, ENST00000492459.1, ENST00000644483.1

Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGCAGGTTTATTATCAGGCCAAATGAGAAACCCTCCAAATGCCTaGGTTAAGCCTTTTAGCCATAAAGTCTTTTCCACCAGAGCATCA +
Preference number: 1 (lower is better)
Translates to: SAGLLSGQMRNPPNA*VKPFSHKVFSTRAS
Trigger: TGATGCTCTGGTGGAAAAGACTTTATGGCTAAAAGGCTTAACCCAGGCATTTGGAGGGTTTCTCATTTGGCCTGATAATAAACCTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644483.1
3UTR-3UTR TCA 90 bp GAATGCAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCATACTTTGCTCAGGGTaGAGGCACAAAACCGAATGG +
Preference number: 2 (lower is better)
Translates to: ECRRMLAGTTSSAGLLSGILCSG*RHKTEW
Trigger: CCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTAT...GCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644483.1
3UTR-3UTR TCA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATTGTAGGCAACTTCAGTaGCAAAGGCATGCATGTCCT +
Preference number: 2 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNCRQLQ*QRHACP
Trigger: AGGACATGCATGCCTTTGTCACTGAAGTTGCCTACA...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
3UTR-3UTR TCA 90 bp ATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGCCAAGACGCAGTTTGTaGCTCATTTCATCTAAGATC +
Preference number: 2 (lower is better)
Translates to: IASNDHLFPLRPLFSESQPRRSL*LISSKI
Trigger: GATCTTAGATGAAATGAGTCACAAACTGCGTCTTGG...CTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
3UTR-3UTR CCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGAGGCACAAAACCGAATaGCTCCAAGACGCAGTTTGT +
Preference number: 2 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKRHKTE*LQDAVC
Trigger: ACAAACTGCGTCTTGGAGCCATTCGGTTTTGTGCCT...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644483.1
3UTR-3UTR CAA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATATTTGTTTAAATACTTaGCTCAGGGTGAAGGCACAA +
Preference number: 3 (lower is better)
Translates to: PMIISSLCVHCSQSLREYICLNT*LRVKAQ
Trigger: TTGTGCCTTCACCCTGAGCAAAGTATTTAAACAAAT...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR GCA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATACTCCATGGTGCGGCTaGCTTCCCGGGCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PMIISSLCVHCSQSLREYTPWCG*LPGRGL
Trigger: CAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGT...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp ATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGCGGCGGCACCCTCTaGAGCCGCTACACAGGATCC +
Preference number: 4 (lower is better)
Translates to: IASNDHLFPLRPLFSESQGGGTL*SRYTGS
Trigger: GGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCC...CTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp GAATGCAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCACTCCATGGTGCGGCTaGCTTCCCGGGCGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ECRRMLAGTTSSAGLLSGTPWCG*LPGRGL
Trigger: CAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGT...GCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTTTGCTAAGCCGTGGTaGTGCTCCTGCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPMIISSLCVHCSQSLREFAKPW*CSCWGR
Trigger: CCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAA...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGCCGTGGTGGTGCTCCTaGTGGGGGCGGTTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLPWWCS*WGRFFR
Trigger: GCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGG...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATTTTGCTAAGCCGTGGTaGTGCTCCTGCTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: PMIISSLCVHCSQSLREYFAKPW*CSCWGR
Trigger: CCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAA...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp AATACTTTGCTCAGGGTGAAGGCACAAAACCGAATGGCTCCAAGACGCAGTTTGGGAGCACGACAGCGCTaGGACTGGTTGGGCCAACGG +
Preference number: 4 (lower is better)
Translates to: NTLLRVKAQNRMAPRRSLGARQR*DWLGQR
Trigger: CCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCC...CAAACTGCGTCTTGGAGCCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR GCA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATCCGTGGTGGTGCTCCTaGTGGGGGCGGTTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNPWWCS*WGRFFR
Trigger: GCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGG...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR GCA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGGCTAAGCCGTGGTGGTaGTCCTGCTGGGGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLAKPWW*SCWGRF
Trigger: GAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGC...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGGGAGCACGACAGCGCTaGGACTGGTTGGGCCAACGG +
Preference number: 4 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLGARQR*DWLGQR
Trigger: CCGTTGGCCCAACCAGTCCCAGCGCTGTCGTGCTCC...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp AATACTTTGCTCAGGGTGAAGGCACAAAACCGAATGGCTCCAAGACGCAGTTTGTGGTGGTGCTCCTGCTaGGGGCGGTTCTTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: NTLLRVKAQNRMAPRRSLWWCSC*GRFFRS
Trigger: TGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCA...CAAACTGCGTCTTGGAGCCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp ATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGAACTGGAAGACTCCATaGTGCGGCTGCCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: IASNDHLFPLRPLFSESQNWKTP*CGCLPG
Trigger: CCCGGGAAGGCAGCCGCACCATGGAGTCTTCCAGTT...CTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGCAAAGGTACGCCGCATaGAAAAGGCACCCGACATTC +
Preference number: 4 (lower is better)
Translates to: LPMIISSLCVHCSQSLREQRYAA*KRHPTF
Trigger: GAATGTCGGGTGCCTTTTTCATGCGGCGTACCTTTG...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGTGGTGGTGCTCCTGCTaGGGGCGGTTCTTTCGCTCA +
Preference number: 4 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLWWCSC*GRFFRS
Trigger: TGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCA...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCCCGGGCGGGGTCTaGGATTCTTTGCTAAGCCGT +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLFPGGV*DSLLSR
Trigger: ACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAA...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATAACTGGAAGACTCCATaGTGCGGCTGCCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNNWKTP*CGCLPG
Trigger: CCCGGGAAGGCAGCCGCACCATGGAGTCTTCCAGTT...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp AGAGCGGCTTCTTGTCCCTTCGAGGAAAAATTCAACAGGAGCATAACCATTCCGCGACAGCGCTGGGACTaGTTGGGCCAACGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: RAASCPFEEKFNRSITIPRQRWD*LGQRRN
Trigger: ATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCG...CGGAATGGTTATGCTCCTGTTGAATTTTTCCTCGAAGGGACAAGAAGCCGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR GCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTGGCGGCGGCACCCTCTaGAGCCGCTACACAGGATCC +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFGGGTL*SRYTGS
Trigger: GGATCCTGTGTAGCGGCTGCAGAGGGTGCCGCCGCC...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp TTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGAGCGCTGGGACTGGTTaGGCCAACGGAGAAATAAGA +
Preference number: 4 (lower is better)
Translates to: LLPMIISSLCVHCSQSLRSAGTG*ANGEIR
Trigger: TCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCT...CCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGACTCATCCCACTTTTTaGGCTCCTTCGAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPMIISSLCVHCSQSLRETHPTF*APSSRG
Trigger: TCCTCTACTCGAAGGAGCTCAAAAAGTGGGATGAGT...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp ATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGCAAAGGTACGCCGCATaGAAAAGGCACCCGACATTC +
Preference number: 4 (lower is better)
Translates to: IASNDHLFPLRPLFSESQQRYAA*KRHPTF
Trigger: GAATGTCGGGTGCCTTTTTCATGCGGCGTACCTTTG...CTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGATGGATGGCCGGTTCTaGAGCAGAACAGCAACTATT +
Preference number: 4 (lower is better)
Translates to: LPMIISSLCVHCSQSLREMDGRF*SRTATI
Trigger: AATAGTTGCTGTTCTGCTTCAGAACCGGCCATCCAT...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTGGAATGCAGAAGAATaGTGGCCGGGACAACTTCTT +
Preference number: 4 (lower is better)
Translates to: LPMIISSLCVHCSQSLREWNAEE*WPGQLL
Trigger: AAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTCCA...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp ATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGCTGGCAATGTTGGAATaGAGAAGAATGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: IASNDHLFPLRPLFSESQLAMLE*RRMLAG
Trigger: CCCGGCCAGCATTCTTCTGCATTCCAACATTGCCAG...CTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGTTCTTTGCTAAGCCGTaGTGGTGCTCCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKFFAKP*WCSCWG
Trigger: CCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAA...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp GAATGCAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCAGCGCTGGGACTGGTTaGGCCAACGGAGAAATAAGA +
Preference number: 4 (lower is better)
Translates to: ECRRMLAGTTSSAGLLSGSAGTG*ANGEIR
Trigger: TCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCT...GCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGCAAGGCTGGCAATGTTaGAATGCAGAAGAATGCTGG +
Preference number: 4 (lower is better)
Translates to: LPMIISSLCVHCSQSLREQGWQC*NAEECW
Trigger: CCAGCATTCTTCTGCATTCCAACATTGCCAGCCTTG...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGAGGAGAGTGATGTGCTaGAGCATAAGCCCATCGACC +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLRRVMC*SISPST
Trigger: GGTCGATGGGCTTATGCTCCAGCACATCACTCTCCT...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATATACTTTGCTCAGGGTaGAGGCACAAAACCGAATGG +
Preference number: 4 (lower is better)
Translates to: PMIISSLCVHCSQSLREYILCSG*RHKTEW
Trigger: CCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTAT...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTGGAACCAAGTTATATaGGCTCCGACTCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLWNQVI*APTHPP
Trigger: GGGAGGATGAGTCGGAGCTCATATAACTTGGTTCCA...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATTGTAGGCAACTTCAGTaGCAAAGGCATGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: PMIISSLCVHCSQSLREYCRQLQ*QRHACP
Trigger: AGGACATGCATGCCTTTGTCACTGAAGTTGCCTACA...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp TTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGATGGATGGCCGGTTCTaGAGCAGAACAGCAACTATT +
Preference number: 4 (lower is better)
Translates to: LLPMIISSLCVHCSQSLRMDGRF*SRTATI
Trigger: AATAGTTGCTGTTCTGCTTCAGAACCGGCCATCCAT...CCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATGGCGCACAAAAATGTTaGGCAGCTGGTTCCTATAAG +
Preference number: 4 (lower is better)
Translates to: PMIISSLCVHCSQSLREYGAQKC*AAGSYK
Trigger: CTTATAGGAACCAGCTGCTCAACATTTTTGTGCGCC...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATAGTACTGTTCCTCACTaGAGTGGTCCTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PMIISSLCVHCSQSLREYSTVPH*SGPLLH
Trigger: GTGAAGAAGAGGACCACTTCAGTGAGGAACAGTACT...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp TTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGAGTACTGTTCCTCACTaGAGTGGTCCTCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LLPMIISSLCVHCSQSLRSTVPH*SGPLLH
Trigger: GTGAAGAAGAGGACCACTTCAGTGAGGAACAGTACT...CCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp TTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGAGCAGAACAACAGGATaGTCCTGGATGGCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LLPMIISSLCVHCSQSLRSRTTG*SWMALC
Trigger: ACAAAGAGCCATCCAGGAGCATCCTGTTGTTCTGCT...CCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGCCCAGTAGAGTTTATTaGCACCAAAGGTACGCCGCA +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLPSRVY*HQRYAA
Trigger: TGCGGCGTACCTTTGGTGGCAATAAACTCTACTGGG...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp AATACTTTGCTCAGGGTGAAGGCACAAAACCGAATGGCTCCAAGACGCAGTTTGATGAGGAGAGTGATGTaGTGGAGCATAAGCCCATCG +
Preference number: 4 (lower is better)
Translates to: NTLLRVKAQNRMAPRRSLMRRVM*WSISPS
Trigger: CGATGGGCTTATGCTCCAGCACATCACTCTCCTCAT...CAAACTGCGTCTTGGAGCCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp TTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGATTGAAGGGATTCCTTaGAAAGCCACTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLPMIISSLCVHCSQSLRIEGIP*KATLPG
Trigger: TCCTGGGAGAGTGGCTTTCCAAGGAATCCCTTCAAT...CCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR TCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGAGGACATCCACAGATTaGAGGGATTCCTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLRTSTD*RDSLES
Trigger: GCTTTCCAAGGAATCCCTTCAATCTGTGGATGTCCT...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGATACTTTGCTCAGGGTaGAGGCACAAAACCGAATGG +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLILCSG*RHKTEW
Trigger: CCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTAT...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp TTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGTGCCAAAGATCGAAGTaGCACAGGATCTCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LLPMIISSLCVHCSQSLRCQRSK*HRISKV
Trigger: TACTTTGGAGATCCTGTGTCACTTCGATCTTTGGCA...CCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGTGGAACCAAGTTATATaGGCTCCGACTCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLWNQVI*APTHPP
Trigger: GGGAGGATGAGTCGGAGCTCATATAACTTGGTTCCA...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGGAATCACCTGGTCTTTaGCAAGGCTGGCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLESPGL*QGWQCW
Trigger: CCAACATTGCCAGCCTTGTCAAAGACCAGGTGATTC...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATGAATCACCTGGTCTTTaGCAAGGCTGGCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNESPGL*QGWQCW
Trigger: CCAACATTGCCAGCCTTGTCAAAGACCAGGTGATTC...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR GCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGAGCAGAACAACAGGATaGTCCTGGATGGCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLSRTTG*SWMALC
Trigger: ACAAAGAGCCATCCAGGAGCATCCTGTTGTTCTGCT...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGCTGGCAATGTTGGAATaGAGAAGAATGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKLAMLE*RRMLAG
Trigger: CCCGGCCAGCATTCTTCTGCATTCCAACATTGCCAG...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp GAATGCAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCAGGCACAAAACCGAATaGCTCCAAGACGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: ECRRMLAGTTSSAGLLSGRHKTE*LQDAVC
Trigger: ACAAACTGCGTCTTGGAGCCATTCGGTTTTGTGCCT...GCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATCAGGATGCTCCTGGATaGCTCTTTGTAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PMIISSLCVHCSQSLREYQDAPG*LFVVSE
Trigger: TTCAGAAACTACAAAGAGCCATCCAGGAGCATCCTG...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp GAATGCAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCAATGCAGAAGAATGCTaGCCGGGACAACTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ECRRMLAGTTSSAGLLSGNAEEC*PGQLLQ
Trigger: CTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATT...GCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp TTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGACTTTCAGAATCACCTaGTCTTTGACAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLPMIISSLCVHCSQSLRTFRIT*SLTRLA
Trigger: TGCCAGCCTTGTCAAAGACCAGGTGATTCTGAAAGT...CCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGGGCTGGTTTTCCTATTaGTGTCTTACAACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: LPMIISSLCVHCSQSLREGWFSY*CLTTKH
Trigger: ATGCTTGGTTGTAAGACACCAATAGGAAAACCAGCC...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGACAGAGAAGGTGAGTTaGCAGATTCCAGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLTEKVS*QIPGCF
Trigger: AAAGCAGCCTGGAATCTGCCAACTCACCTTCTCTGT...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR TCA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGGGCGCACAAAAATGTTaGGCAGCTGGTTCCTATAAG +
Preference number: 4 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLGAQKC*AAGSYK
Trigger: CTTATAGGAACCAGCTGCTCAACATTTTTGTGCGCC...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp TTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGTGGGGAAGAGTAAACTaGTTGCTTCCAATGATCATC +
Preference number: 4 (lower is better)
Translates to: LLPMIISSLCVHCSQSLRWGRVN*LLPMII
Trigger: GATGATCATTGGAAGCAATCAGTTTACTCTTCCCCA...CCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTCAGTGACAAAGGCATaGATGTCCTCAGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLSVTKA*MSSDCF
Trigger: GAAACAGTCTGAGGACATGCATGCCTTTGTCACTGA...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATTGGAATGCAGAAGAATaGTGGCCGGGACAACTTCTT +
Preference number: 4 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNWNAEE*WPGQLL
Trigger: AAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTCCA...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR GCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGATGAGGAGAGTGATGTaGTGGAGCATAAGCCCATCG +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKMRRVM*WSISPS
Trigger: CGATGGGCTTATGCTCCAGCACATCACTCTCCTCAT...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp GAATGCAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCAACCCTGGTGTCATCTaGAATGCTACTGCTACTAAG +
Preference number: 4 (lower is better)
Translates to: ECRRMLAGTTSSAGLLSGNPGVI*NATATK
Trigger: CTTAGTAGCAGTAGCATTGCAGATGACACCAGGGTT...GCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR GCA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATATCATCTCTTCCCTCTaGGTCCACTGTTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNIISSL*VHCSQS
Trigger: ACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGAT...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTTTCCCGGGCGGGGTCTaGGATTCTTTGCTAAGCCGT +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFFPGGV*DSLLSR
Trigger: ACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAA...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTCGACAGCGCTGGGACTaGTTGGGCCAACGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFRQRWD*LGQRRN
Trigger: ATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTCG...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp ATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGACAACAGGATGCTCCTaGATGGCTCTTTGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: IASNDHLFPLRPLFSESQTTGCS*MALCSF
Trigger: GAAACTACAAAGAGCCATCCAGGAGCATCCTGTTGT...CTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp AGAGCGGCTTCTTGTCCCTTCGAGGAAAAATTCAACAGGAGCATAACCATTCCGACAACAGGATGCTCCTaGATGGCTCTTTGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: RAASCPFEEKFNRSITIPTTGCS*MALCSF
Trigger: GAAACTACAAAGAGCCATCCAGGAGCATCCTGTTGT...CGGAATGGTTATGCTCCTGTTGAATTTTTCCTCGAAGGGACAAGAAGCCGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp AATACTTTGCTCAGGGTGAAGGCACAAAACCGAATGGCTCCAAGACGCAGTTTGAACCCTCCAAATGCCTaGGTTAAGCCTTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: NTLLRVKAQNRMAPRRSLNPPNA*VKPFSH
Trigger: ATGGCTAAAAGGCTTAACCCAGGCATTTGGAGGGTT...CAAACTGCGTCTTGGAGCCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGAATGCAGAAGAATGCTaGCCGGGACAACTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLNAEEC*PGQLLQ
Trigger: CTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATT...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATCAAGGCTGGCAATGTTaGAATGCAGAAGAATGCTGG +
Preference number: 4 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNQGWQC*NAEECW
Trigger: CCAGCATTCTTCTGCATTCCAACATTGCCAGCCTTG...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CCA 90 bp AATACTTTGCTCAGGGTGAAGGCACAAAACCGAATGGCTCCAAGACGCAGTTTGACTTTCAGAATCACCTaGTCTTTGACAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NTLLRVKAQNRMAPRRSLTFRIT*SLTRLA
Trigger: TGCCAGCCTTGTCAAAGACCAGGTGATTCTGAAAGT...CAAACTGCGTCTTGGAGCCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR TCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGACTCATCCCACTTTTTaGGCTCCTTCGAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKTHPTF*APSSRG
Trigger: TCCTCTACTCGAAGGAGCTCAAAAAGTGGGATGAGT...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGCCAAGACGCAGTTTGTaGCTCATTTCATCTAAGATC +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLPRRSL*LISSKI
Trigger: GATCTTAGATGAAATGAGTCACAAACTGCGTCTTGG...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp AATACTTTGCTCAGGGTGAAGGCACAAAACCGAATGGCTCCAAGACGCAGTTTGCCAAGACGCAGTTTGTaGCTCATTTCATCTAAGATC +
Preference number: 4 (lower is better)
Translates to: NTLLRVKAQNRMAPRRSLPRRSL*LISSKI
Trigger: GATCTTAGATGAAATGAGTCACAAACTGCGTCTTGG...CAAACTGCGTCTTGGAGCCATTCGGTTTTGTGCCTTCACCCTGAGCAAAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR TCA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTATTATCAGGCCAAATaGGAAACCCTCCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLYYQAK*ETLQMP
Trigger: AGGCATTTGGAGGGTTTCTCATTTGGCCTGATAATA...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGTGCCAAAGATCGAAGTaGCACAGGATCTCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKCQRSK*HRISKV
Trigger: TACTTTGGAGATCCTGTGTCACTTCGATCTTTGGCA...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGAACCCTGGTGTCATCTaGAATGCTACTGCTACTAAG +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKNPGVI*NATATK
Trigger: CTTAGTAGCAGTAGCATTGCAGATGACACCAGGGTT...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGCAGGATGCTCCTGGATaGCTCTTTGTAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKQDAPG*LFVVSE
Trigger: TTCAGAAACTACAAAGAGCCATCCAGGAGCATCCTG...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATTGTTCCTCACTGAAGTaGTCCTCTTCTTCACTCAAA +
Preference number: 4 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNCSSLK*SSSSLK
Trigger: TTTGAGTGAAGAAGAGGACCACTTCAGTGAGGAACA...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR TCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGTATTATCAGGCCAAATaGGAAACCCTCCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKYYQAK*ETLQMP
Trigger: AGGCATTTGGAGGGTTTCTCATTTGGCCTGATAATA...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGTGGGGAAGAGTAAACTaGTTGCTTCCAATGATCATC +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKWGRVN*LLPMII
Trigger: GATGATCATTGGAAGCAATCAGTTTACTCTTCCCCA...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTCCCAGTAGAGTTTATTaGCACCAAAGGTACGCCGCA +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFPSRVY*HQRYAA
Trigger: TGCGGCGTACCTTTGGTGGCAATAAACTCTACTGGG...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGGAAATAAGAGTTAGATaGACTGGAAGACTCCATGGT +
Preference number: 4 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKEIRVR*TGRLHG
Trigger: ACCATGGAGTCTTCCAGTTCATCTAACTCTTATTTC...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTTGTAGGCAACTTCAGTaGCAAAGGCATGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFCRQLQ*QRHACP
Trigger: AGGACATGCATGCCTTTGTCACTGAAGTTGCCTACA...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTATCATCTCTTCCCTCTaGGTCCACTGTTCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFIISSL*VHCSQS
Trigger: ACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGAT...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGGCATTTCTTCTAATTTaGTTGTGGCAGGTTCATTCA +
Preference number: 4 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLAFLLI*LWQVHS
Trigger: TGAATGAACCTGCCACAACCAAATTAGAAGAAATGC...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR GCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTTCAGTGACAAAGGCATaGATGTCCTCAGACTGTTTC +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFSVTKA*MSSDCF
Trigger: GAAACAGTCTGAGGACATGCATGCCTTTGTCACTGA...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTAACCCTCCAAATGCCTaGGTTAAGCCTTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFNPPNA*VKPFSH
Trigger: ATGGCTAAAAGGCTTAACCCAGGCATTTGGAGGGTT...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTTGTTCCTCACTGAAGTaGTCCTCTTCTTCACTCAAA +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFCSSLK*SSSSLK
Trigger: TTTGAGTGAAGAAGAGGACCACTTCAGTGAGGAACA...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTGGCTGGTTTTCCTATTaGTGTCTTACAACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFGWFSY*CLTTKH
Trigger: ATGCTTGGTTGTAAGACACCAATAGGAAAACCAGCC...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR TCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTGAAATAAGAGTTAGATaGACTGGAAGACTCCATGGT +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFEIRVR*TGRLHG
Trigger: ACCATGGAGTCTTCCAGTTCATCTAACTCTTATTTC...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CCA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTGCATTTCTTCTAATTTaGTTGTGGCAGGTTCATTCA +
Preference number: 4 (lower is better)
Translates to: FPVCCNESFDESNYVTEFAFLLI*LWQVHS
Trigger: TGAATGAACCTGCCACAACCAAATTAGAAGAAATGC...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS CCA 90 bp TGCGGCTGCCTTCCCGGGCGGGGTCTGGGATTCTTTGCTAAGCCGTaGTGGTGCTCCTGCTGGGGGCGGTTCTTTCGCTCAGGACGGCCC +
Preference number: 5 (lower is better)
Translates to: CGCLPGRGLGFFAKP*WCSCWGRFFRSGRP
Trigger: GGGCCGTCCTGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS CCA 90 bp GGCTGCCTTCCCGGGCGGGGTCTGGGATTCTTTGCTAAGCCGTGGTaGTGCTCCTGCTGGGGGCGGTTCTTTCGCTCAGGACGGCCCTAC +
Preference number: 5 (lower is better)
Translates to: GCLPGRGLGFFAKPW*CSCWGRFFRSGRPY
Trigger: GTAGGGCCGTCCTGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS GCA 90 bp TGCCTTCCCGGGCGGGGTCTGGGATTCTTTGCTAAGCCGTGGTGGTaGTCCTGCTGGGGGCGGTTCTTTCGCTCAGGACGGCCCTACTTC +
Preference number: 5 (lower is better)
Translates to: CLPGRGLGFFAKPWW*SCWGRFFRSGRPYF
Trigger: GAAGTAGGGCCGTCCTGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS TCA 90 bp GACAGCGCTGGGACTGGTTGGGCCAACGGAGAAATAAGAGTTAGATaGACTGGAAGACTCCATGGTGCGGCTGCCTTCCCGGGCGGGGTC +
Preference number: 5 (lower is better)
Translates to: DSAGTGWANGEIRVR*TGRLHGAAAFPGGV
Trigger: GACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTCCAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS-3UTR CAA 90 bp ATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGCAGCGCTGGGACTGGTaGGGCCAACGGAGAAATAAG +
Preference number: 5 (lower is better)
Translates to: IASNDHLFPLRPLFSESQQRWDW*GQRRNK
Trigger: CTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTG...CTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp GAATGCAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAGCGCTGGGACTGGTaGGGCCAACGGAGAAATAAG +
Preference number: 5 (lower is better)
Translates to: ECRRMLAGTTSSAGLLSGQRWDW*GQRRNK
Trigger: CTTATTTCTCCGTTGGCCCAACCAGTCCCAGCGCTG...GCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CAA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATGGGGTCTGGGATTCTTaGCTAAGCCGTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNGVWDS*LSRGGA
Trigger: AGCACCACCACGGCTTAGCAAAGAATCCCAGACCCC...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CAA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTGGCAGAGCGGCTTCTaGTCCCTTCGAGGAAAAATT +
Preference number: 5 (lower is better)
Translates to: LPMIISSLCVHCSQSLREWQSGF*SLRGKI
Trigger: AATTTTTCCTCGAAGGGACAAGAAGCCGCTCTGCCA...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGAACAGAGAAGGTGAGTaGGCAGATTCCAGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: LPMIISSLCVHCSQSLRENREGE*ADSRLL
Trigger: AAGCAGCCTGGAATCTGCCAACTCACCTTCTCTGTT...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CAA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTGGCAGAGCGGCTTCTaGTCCCTTCGAGGAAAAATT +
Preference number: 5 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLWQSGF*SLRGKI
Trigger: AATTTTTCCTCGAAGGGACAAGAAGCCGCTCTGCCA...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp ATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGTTAGGAGTCAATGTCTaGGCAGAGCGGCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: IASNDHLFPLRPLFSESQLGVNV*AERLLV
Trigger: GACAAGAAGCCGCTCTGCCAAGACATTGACTCCTAA...CTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTGGCTGGTTTTCCTATaGGTGTCTTACAACCAAGCA +
Preference number: 5 (lower is better)
Translates to: LPMIISSLCVHCSQSLREWLVFL*VSYNQA
Trigger: TGCTTGGTTGTAAGACACCAATAGGAAAACCAGCCA...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATACATTGAGAGGTACCTaGATCGAGAAGCTGACTTGT +
Preference number: 5 (lower is better)
Translates to: PMIISSLCVHCSQSLREYTLRGT*IEKLTC
Trigger: ACAAGTCAGCTTCTCGATCAAGGTACCTCTCAATGT...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATTGGCTGGTTTTCCTATaGGTGTCTTACAACCAAGCA +
Preference number: 5 (lower is better)
Translates to: PMIISSLCVHCSQSLREYWLVFL*VSYNQA
Trigger: TGCTTGGTTGTAAGACACCAATAGGAAAACCAGCCA...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTGGGGTCTGGGATTCTTaGCTAAGCCGTGGTGGTGCT +
Preference number: 5 (lower is better)
Translates to: FPVCCNESFDESNYVTEFGVWDS*LSRGGA
Trigger: AGCACCACCACGGCTTAGCAAAGAATCCCAGACCCC...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGGAGGACATCCACAGATaGAAGGGATTCCTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLEDIHR*KGFLGK
Trigger: CTTTCCAAGGAATCCCTTCAATCTGTGGATGTCCTC...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp CTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGGTCTTTCGTAGTCACTaGTATGGCTTCACTTTTACA +
Preference number: 5 (lower is better)
Translates to: LPMIISSLCVHCSQSLREVFRSH*YGFTFT
Trigger: TGTAAAAGTGAAGCCATACAAGTGACTACGAAAGAC...CTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp GGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGACATTGAGAGGTACCTaGATCGAGAAGCTGACTTGT +
Preference number: 5 (lower is better)
Translates to: GKSKLIASNDHLFPLRPLTLRGT*IEKLTC
Trigger: ACAAGTCAGCTTCTCGATCAAGGTACCTCTCAATGT...CAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp TTGCTTCCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGTCTGAGGAATGTATCTaGGAACCAAGTTATATGAGC +
Preference number: 5 (lower is better)
Translates to: LLPMIISSLCVHCSQSLRSEECI*EPSYMS
Trigger: GCTCATATAACTTGGTTCCAAGATACATTCCTCAGA...CCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGGAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp CCAATGATCATCTCTTCCCTCTGCGTCCACTGTTCTCAGAGTCTCAGGGAGTATAGCATTTCTTCTAATTaGGTTGTGGCAGGTTCATTC +
Preference number: 5 (lower is better)
Translates to: PMIISSLCVHCSQSLREYSISSN*VVAGSF
Trigger: GAATGAACCTGCCACAACCAAATTAGAAGAAATGCT...ATACTCCCTGAGACTCTGAGAACAGTGGACGCAGAGGGAAGAGATGATCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp TTCCCTGTTTGTTGTAATGAGTCCTTCGATGAGAGTAATTACGTGACCGAATTTTTAGGAGTCAATGTCTaGGCAGAGCGGCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: FPVCCNESFDESNYVTEFLGVNV*AERLLV
Trigger: GACAAGAAGCCGCTCTGCCAAGACATTGACTCCTAA...AAATTCGGTCACGTAATTACTCTCATCGAAGGACTCATTACAACAAACAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATTCTGAGGAATGTATCTaGGAACCAAGTTATATGAGC +
Preference number: 5 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNSEECI*EPSYMS
Trigger: GCTCATATAACTTGGTTCCAAGATACATTCCTCAGA...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CAA 90 bp ACTGTGGTGGGGAAGAGTAAACTGATTGCTTCCAATGATCATCTCTTCCCTCTGGTCTTTCGTAGTCACTaGTATGGCTTCACTTTTACA +
Preference number: 5 (lower is better)
Translates to: TVVGKSKLIASNDHLFPLVFRSH*YGFTFT
Trigger: TGTAAAAGTGAAGCCATACAAGTGACTACGAAAGAC...CAGAGGGAAGAGATGATCATTGGAAGCAATCAGTTTACTCTTCCCCACCACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS-3UTR CAA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATAGCATTTCTTCTAATTaGGTTGTGGCAGGTTCATTC +
Preference number: 5 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNSISSN*VVAGSF
Trigger: GAATGAACCTGCCACAACCAAATTAGAAGAAATGCT...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CAA 90 bp CAGAAGAATGCTGGCCGGGACAACTTCTTCAGCAGGTTTATTATCAGGCCAAATATTTGTTTAAATACTTaGCTCAGGGTGAAGGCACAA +
Preference number: 5 (lower is better)
Translates to: QKNAGRDNFFSRFIIRPNICLNT*LRVKAQ
Trigger: TTGTGCCTTCACCCTGAGCAAAGTATTTAAACAAAT...ATTTGGCCTGATAATAAACCTGCTGAAGAAGTTGTCCCGGCCAGCATTCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644483.1
CDS-3UTR CAA 90 bp AAACACACACATAGTGTCAGATACAAACGCCTTTTAACCACTGTGGTGGGGAAGATTTGTTTAAATACTTaGCTCAGGGTGAAGGCACAA +
Preference number: 5 (lower is better)
Translates to: KHTHSVRYKRLLTTVVGKICLNT*LRVKAQ
Trigger: TTGTGCCTTCACCCTGAGCAAAGTATTTAAACAAAT...CTTCCCCACCACAGTGGTTAAAAGGCGTTTGTATCTGACACTATGTGTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000644483.1
CDS CAA 72 bp GGTGCGGCTGCCTTCCCGGGCGGGGTCTGGGATTCTTaGCTAAGCCGTGGTGGTGCTCCTGCTGGGGGCGGT +
Preference number: 6 (lower is better)
Translates to: GAAAFPGGVWDS*LSRGGAPAGGG
Trigger: ACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS GCA 72 bp GGGCGGGGTCTGGGATTCTTTGCTAAGCCGTGGTGGTaGTCCTGCTGGGGGCGGTTCTTTCGCTCAGGACGG +
Preference number: 6 (lower is better)
Translates to: GRGLGFFAKPWW*SCWGRFFRSGR
Trigger: CCGTCCTGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS CCA 72 bp CCCGGGCGGGGTCTGGGATTCTTTGCTAAGCCGTGGTaGTGCTCCTGCTGGGGGCGGTTCTTTCGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: PGRGLGFFAKPW*CSCWGRFFRSG
Trigger: TCCTGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS CAA 90 bp AGACTCCATGGTGCGGCTGCCTTCCCGGGCGGGGTCTGGGATTCTTaGCTAAGCCGTGGTGGTGCTCCTGCTGGGGGCGGTTCTTTCGCT +
Preference number: 6 (lower is better)
Translates to: RLHGAAAFPGGVWDS*LSRGGAPAGGGSFA
Trigger: AGCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS CCA 72 bp CTTCCCGGGCGGGGTCTGGGATTCTTTGCTAAGCCGTaGTGGTGCTCCTGCTGGGGGCGGTTCTTTCGCTCA +
Preference number: 6 (lower is better)
Translates to: LPGRGLGFFAKP*WCSCWGRFFRS
Trigger: TGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS CCA 72 bp AGACTCCATGGTGCGGCTGCCTTCCCGGGCGGGGTCTaGGATTCTTTGCTAAGCCGTGGTGGTGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: RLHGAAAFPGGV*DSLLSRGGAPA
Trigger: AGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS GCA 72 bp GGTCTGGGATTCTTTGCTAAGCCGTGGTGGTGCTCCTaGTGGGGGCGGTTCTTTCGCTCAGGACGGCCCTAC +
Preference number: 6 (lower is better)
Translates to: GLGFFAKPWWCS*WGRFFRSGRPY
Trigger: GTAGGGCCGTCCTGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS CCA 72 bp CTGGGATTCTTTGCTAAGCCGTGGTGGTGCTCCTGCTaGGGGCGGTTCTTTCGCTCAGGACGGCCCTACTTC +
Preference number: 6 (lower is better)
Translates to: LGFFAKPWWCSC*GRFFRSGRPYF
Trigger: GAAGTAGGGCCGTCCTGAGCGAAAGAACCGCCCCCAGCAGGAGCACCACCACGGCTTAGCAAAGAATCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS TCA 72 bp GGGACTGGTTGGGCCAACGGAGAAATAAGAGTTAGATaGACTGGAAGACTCCATGGTGCGGCTGCCTTCCCG +
Preference number: 6 (lower is better)
Translates to: GTGWANGEIRVR*TGRLHGAAAFP
Trigger: CGGGAAGGCAGCCGCACCATGGAGTCTTCCAGTTCATCTAACTCTTATTTCTCCGTTGGCCCAACCAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366647.9
ENST00000416000.1
ENST00000436239.5
ENST00000644483.1
CDS CAA 72 bp GATCTCACTCACTTCCTCTCGGAGGACATCCACAGATaGAAGGGATTCCTTGGAAAGCGAGTAGAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: DLTHFLSEDIHR*KGFLGKRVEEH
Trigger: GTGCTCCTCTACTCGCTTTCCAAGGAATCCCTTCAATCTGTGGATGTCCTCCGAGAGGAAGTGAGTGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436239.5
CDS CAA 90 bp TGCTTCAAGGCAGGGACAAGTGAGAGGTATGGCTTCCTCCTGGACTaGATCACATTCATTCTTGAACAACTTGCCTTGTCTCAGCTTGCT +
Preference number: 6 (lower is better)
Translates to: CFKAGTSERYGFLLD*ITFILEQLALSQLA
Trigger: AGCAAGCTGAGACAAGGCAAGTTGTTCAAGAATGAATGTGATCAAGTCCAGGAGGAAGCCATACCTCTCACTTGTCCCTGCCTTGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492459.1
CDS TCA 72 bp CAGGGACAAGTGAGAGGTATGGCTTCCTCCTGGACTTaGTCACATTCATTCTTGAACAACTTGCCTTGTCTC +
Preference number: 6 (lower is better)
Translates to: QGQVRGMASSWT*SHSFLNNLPCL
Trigger: GAGACAAGGCAAGTTGTTCAAGAATGAATGTGATCAAGTCCAGGAGGAAGCCATACCTCTCACTTGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492459.1
CDS CAA 72 bp GCAGGGACAAGTGAGAGGTATGGCTTCCTCCTGGACTaGATCACATTCATTCTTGAACAACTTGCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: AGTSERYGFLLD*ITFILEQLALS
Trigger: AGACAAGGCAAGTTGTTCAAGAATGAATGTGATCAAGTCCAGGAGGAAGCCATACCTCTCACTTGTCCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492459.1
CDS CAA 72 bp GATCTCACTCACTTCCTCTCGGAGGACATCCACAGATaGAAGGGATTCCTTGGAAAGCTGTTTAATGACATA +
Preference number: 6 (lower is better)
Translates to: DLTHFLSEDIHR*KGFLGKLFNDI
Trigger: TATGTCATTAAACAGCTTTCCAAGGAATCCCTTCAATCTGTGGATGTCCTCCGAGAGGAAGTGAGTGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366647.9
ENST00000416000.1