Pregenerated sensors for GNL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000163938Ensembl transcript IDs: ENST00000394799.6, ENST00000418458.6, ENST00000460073.1, ENST00000462550.5, ENST00000468146.5, ENST00000468885.1, ENST00000474423.1, ENST00000479230.5, ENST00000484022.1, ENST00000492349.5, ENST00000496254.5, ENST00000497356.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAATGGCCTCTTCTACCTGAGGACATCTGCAACCAAGAGGATCTCTaGCATCCAACACCTCTAGGACAACATCGGAGGCTTCAATCACCT | + |
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Preference number: 1 (lower is better) Translates to: QWPLLPEDICNQEDL*HPTPLGQHRRLQSP Trigger: AGGTGATTGAAGCCTCCGATGTTGTCCTAGAGGTGTTGGATGCCAGAGATCCTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| 3UTR TCA 90 bp | AGTACCAGCTTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTaGGGACATCTGCAACCAAGAGGATCTCTGGCATCCAACACCTCT | + |
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Preference number: 1 (lower is better) Translates to: STSFFCPLWTMASST*GHLQPRGSLASNTS Trigger: AGAGGTGTTGGATGCCAGAGATCCTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAAGCTGGTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| 3UTR GCA 90 bp | TTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTaGAACCAAGAGGATCTCTGGCATCCAACACCTCTAGGACAACAT | + |
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Preference number: 1 (lower is better) Translates to: FSVHSGQWPLLPEDI*NQEDLWHPTPLGQH Trigger: ATGTTGTCCTAGAGGTGTTGGATGCCAGAGATCCTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCAAGAGGATCTCTaGCATCCAACACCTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PAFSVHSGQWPLLPEDICNQEDL*HPTPLG Trigger: TCCTAGAGGTGTTGGATGCCAGAGATCCTCTTGGTT...GCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAAGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| 3UTR GCA 72 bp | CACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTaGAACCAAGAGGATCTCTGGCATCCAACACCTCTA | + |
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Preference number: 3 (lower is better) Translates to: HSGQWPLLPEDI*NQEDLWHPTPL Trigger: TAGAGGTGTTGGATGCCAGAGATCCTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| 3UTR CCA 72 bp | CTTCTACCTGAGGACATCTGCAACCAAGAGGATCTCTaGCATCCAACACCTCTAGGACAACATCGGAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LLPEDICNQEDL*HPTPLGQHRRL Trigger: AAGCCTCCGATGTTGTCCTAGAGGTGTTGGATGCCAGAGATCCTCTTGGTTGCAGATGTCCTCAGGTAGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| 3UTR TCA 72 bp | TTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTaGGGACATCTGCAACCAAGAGGATCTCTGGCATCC | + |
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Preference number: 3 (lower is better) Translates to: FFCPLWTMASST*GHLQPRGSLAS Trigger: GGATGCCAGAGATCCTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR GCA 90 bp | CCAGCTTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCACAAACACATCAACCTaGCTCCGCTGGCGCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: PAFSVHSGQWPLLPEDICTNTST*LRWRHV Trigger: CACGTGGCGCCAGCGGAGGCAGGTTGATGTGTTTGT...GCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAAGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR TCA 90 bp | CCAGCTTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCATCCTTTGGTTTTGTTaGGGCTCTGAACACCACTGT | + |
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Preference number: 4 (lower is better) Translates to: PAFSVHSGQWPLLPEDICILWFC*GSEHHC Trigger: ACAGTGGTGTTCAGAGCCTCAACAAAACCAAAGGAT...GCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAAGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR CCA 90 bp | TCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCAAGAGACTGTTTGGAACTCCTaGGTCTTTCCTAGGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SVHSGQWPLLPEDICNQETVWNS*VFPRLL Trigger: AAGAAGCCTAGGAAAGACCCAGGAGTTCCAAACAGT...CTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR CCA 90 bp | TATAAGTACCAGCTTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGGTCCACTCTGGACAATaGCCTCTTCTACCTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: YKYQLFLSTLDNGLFYLRVHSGQ*PLLPED Trigger: GTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGAC...CCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAAGCTGGTACTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR TCA 90 bp | GAGGACATCTGCAACCAAGAGGATCTCTGGCATCCAACACCTCTAGGACAACATGTTTTGTTGAGGCTCTaGACACCACTGTTGGCAATT | + |
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Preference number: 4 (lower is better) Translates to: EDICNQEDLWHPTPLGQHVLLRL*TPLLAI Trigger: AATTGCCAACAGTGGTGTTCAGAGCCTCAACAAAAC...ATGTTGTCCTAGAGGTGTTGGATGCCAGAGATCCTCTTGGTTGCAGATGTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR GCA 90 bp | TATAAGTACCAGCTTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGCTACCTGAGGACATCTaGAACCAAGAGGATCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: YKYQLFLSTLDNGLFYLRLPEDI*NQEDLW Trigger: CCAGAGATCCTCTTGGTTGCAGATGTCCTCAGGTAG...CCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAAGCTGGTACTTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR GCA 90 bp | CACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCAAGAGGATCTCTCTTTGAATTCTGTTTaGCCGACTTGGCTTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: HSGQWPLLPEDICNQEDLSLNSV*PTWLCS Trigger: AGAACAAAGCCAAGTCGGGCAAACAGAATTCAAAGA...GAGATCCTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR CCA 90 bp | CTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCAAGAGGATTTTATACCGCTTATaGCAGGTCATGCGTTTACTT | + |
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Preference number: 4 (lower is better) Translates to: LSTLDNGLFYLRTSATKRILYRL*QVMRLL Trigger: AAGTAAACGCATGACCTGCCATAAGCGGTATAAAAT...CCTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR CCA 90 bp | TTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCAATTTTTCTGTCCACTCTaGACAATGGCCTCTTCTACC | + |
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Preference number: 4 (lower is better) Translates to: FSVHSGQWPLLPEDICNQFFCPL*TMASST Trigger: GGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAA...TTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR TCA 90 bp | TCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCAAGAGCATAGGTTCCACATTTaGTGGCTTAATATCAGGATT | + |
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Preference number: 4 (lower is better) Translates to: SVHSGQWPLLPEDICNQEHRFHI*WLNIRI Trigger: AATCCTGATATTAAGCCATCAAATGTGGAACCTATG...CTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR TCA 90 bp | TTCCCTTTATCCTTTGGTTTTGTTGAGGCTCTGAACACCACTGTTGGCAATTCTATGGCCTCTTCTACCTaGGGACATCTGCAACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: FPLSFGFVEALNTTVGNSMASST*GHLQPR Trigger: TCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCAT...AGAATTGCCAACAGTGGTGTTCAGAGCCTCAACAAAACCAAAGGATAAAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR GCA 90 bp | CTTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCGCTTATGGCAGGTCATaGGTTTACTTGCTTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: LFLSTLDNGLFYLRTSATAYGRS*VYLLSL Trigger: TAAAGAAAGCAAGTAAACGCATGACCTGCCATAAGC...GGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR CCA 90 bp | CTGCAACCAAGAGGATCTCTGGCATCCAACACCTCTAGGACAACATCGGAGGCTACCTTTTTAAGTTCTTaGCAGTACAGCTTCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LQPRGSLASNTSRTTSEATFLSS*QYSFFE Trigger: TTCAAAGAAGCTGTACTGCCAAGAACTTAAAAAGGT...AGCCTCCGATGTTGTCCTAGAGGTGTTGGATGCCAGAGATCCTCTTGGTTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR CCA 90 bp | TTCCCTTTATCCTTTGGTTTTGTTGAGGCTCTGAACACCACTGTTGGCAATTCTAACCAAGAGGATCTCTaGCATCCAACACCTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: FPLSFGFVEALNTTVGNSNQEDL*HPTPLG Trigger: TCCTAGAGGTGTTGGATGCCAGAGATCCTCTTGGTT...AGAATTGCCAACAGTGGTGTTCAGAGCCTCAACAAAACCAAAGGATAAAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR CCA 90 bp | ATCTTCCCTTTATCCTTTGGTTTTGTTGAGGCTCTGAACACCACTGTTGGCAATTCTGTTTGCCCGACTTaGCTTTGTTCTCAGTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: IFPLSFGFVEALNTTVGNSVCPT*LCSQFC Trigger: GCAAAACTGAGAACAAAGCCAAGTCGGGCAAACAGA...ATTGCCAACAGTGGTGTTCAGAGCCTCAACAAAACCAAAGGATAAAGGGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR GCA 90 bp | ATCTTCCCTTTATCCTTTGGTTTTGTTGAGGCTCTGAACACCACTGTTGGCAATCTGTCAAGTTTCTGCTaGTGTTTTAGTTCTTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: IFPLSFGFVEALNTTVGNLSSFC*CFSSSS Trigger: GCTTGAAGAACTAAAACAGCAGCAGAAACTTGACAG...ATTGCCAACAGTGGTGTTCAGAGCCTCAACAAAACCAAAGGATAAAGGGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS CCA 90 bp | TTAACTCAGCAGAGACAAAGCCGTAGCCGTAGAAGAGCGTCGTGGTaGCTGCAGCAACTTCCAGACGTGGGTCCCTCCACGCCCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LTQQRQSRSRRRASW*LQQLPDVGPSTPAS Trigger: GGAGGCGGGCGTGGAGGGACCCACGTCTGGAAGTTGCTGCAGCCACCACGACGCTCTTCTACGGCTACGGCTTTGTCTCTGCTGAGTTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394799.6 |
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| CDS CCA 90 bp | TCTTTAACTCAGCAGAGACAAAGCCGTAGCCGTAGAAGAGCGTCGTaGTGGCTGCAGCAACTTCCAGACGTGGGTCCCTCCACGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SLTQQRQSRSRRRAS*WLQQLPDVGPSTPA Trigger: GGCGGGCGTGGAGGGACCCACGTCTGGAAGTTGCTGCAGCCACCACGACGCTCTTCTACGGCTACGGCTTTGTCTCTGCTGAGTTAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394799.6 |
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| CDS CCA 90 bp | TCTCGAACCTGGGCCAGTCTGCACGTGGCCACGGAAAGAAAATATTaGGCCTCAAACCTGGCTCAGACGCTGCTTCCTTACGAAAATCTA | + |
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Preference number: 5 (lower is better) Translates to: SRTWASLHVATERKY*ASNLAQTLLPYENL Trigger: TAGATTTTCGTAAGGAAGCAGCGTCTGAGCCAGGTTTGAGGCCCAATATTTTCTTTCCGTGGCCACGTGCAGACTGGCCCAGGTTCGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460073.1 |
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| CDS-3UTR CAA 90 bp | CTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCAAGAGGGGCAGTACAGCTTCTTaGAATTCTGTTTGCCCGACT | + |
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Preference number: 5 (lower is better) Translates to: LSTLDNGLFYLRTSATKRGSTAS*NSVCPT Trigger: AGTCGGGCAAACAGAATTCAAAGAAGCTGTACTGCC...CCTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS GCA 90 bp | AAGGATGGCACTGGCAGCCTCCATCGGTTTTACTACTTCAATACTTaGTGGACTTCGCAGAGCAAGCGCAGAGGAGGAATTAAGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: KDGTGSLHRFYYFNT*WTSQSKRRGGIKWR Trigger: TCTCCACTTAATTCCTCCTCTGCGCTTGCTCTGCGAAGTCCAGCAAGTATTGAAGTAGTAAAACCGATGGAGGCTGCCAGTGCCATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000496254.5 |
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| CDS CCA 90 bp | TTCCCTAAGAAGAGCCTCCTTAAAGGGAGCACTGTTTGGAACTCCTaGGTCTTTCCTAGGCTTCTTGTGACCCCGCTTTTTAGCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: FPKKSLLKGSTVWNS*VFPRLLVTPLFSLL Trigger: AAGGAGGCTAAAAAGCGGGGTCACAAGAAGCCTAGGAAAGACCCAGGAGTTCCAAACAGTGCTCCCTTTAAGGAGGCTCTTCTTAGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000460073.1 ENST00000462550.5 ENST00000468146.5 ENST00000474423.1 ENST00000479230.5 ENST00000492349.5 ENST00000496254.5 |
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| CDS CCA 90 bp | GATGGCACTGGCAGCCTCCATCGGTTTTACTACTTCAATACTTGCTaGACTTCGCAGAGCAAGCGCAGAGGAGGAATTAAGTGGAGATAC | + |
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Preference number: 5 (lower is better) Translates to: DGTGSLHRFYYFNTC*TSQSKRRGGIKWRY Trigger: GTATCTCCACTTAATTCCTCCTCTGCGCTTGCTCTGCGAAGTCCAGCAAGTATTGAAGTAGTAAAACCGATGGAGGCTGCCAGTGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000496254.5 |
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| CDS-3UTR CAA 90 bp | CTTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCTTGCCCGACTTGGCTTaGTTCTCAGTTTTGCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: LFLSTLDNGLFYLRTSATLPDLA*FSVLQS Trigger: GCTTTGCAAAACTGAGAACAAAGCCAAGTCGGGCAA...GGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS-3UTR CAA 90 bp | CTGCAACCAAGAGGATCTCTGGCATCCAACACCTCTAGGACAACATCGGAGGCTTTAGGCCTTTTCATATaGGCTGTAGAAGGAAGCACA | + |
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Preference number: 5 (lower is better) Translates to: LQPRGSLASNTSRTTSEALGLFI*AVEGST Trigger: TGTGCTTCCTTCTACAGCCAATATGAAAAGGCCTAA...AGCCTCCGATGTTGTCCTAGAGGTGTTGGATGCCAGAGATCCTCTTGGTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS GCA 90 bp | TCCCCACATTTGGGAAACCAATTACTCCAACCCGAATGGCTTTGCTaGAAGTTTCCTGAAAACCTCCAAGAAGTTTCCAAAGGCCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SPHLGNQLLQPEWLC*KFPENLQEVSKGPL Trigger: AAGAGGGCCTTTGGAAACTTCTTGGAGGTTTTCAGGAAACTTGCAGCAAAGCCATTCGGGTTGGAGTAATTGGTTTCCCAAATGTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000484022.1 ENST00000496254.5 |
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| CDS GCA 90 bp | TCCTTCTTTCTGTTTCCTGGAGATCCCCAACCTTTCTTTCCATACTaGTGGCAACCAGTGTTCTCCTGTTCTAATCATTCAGCTGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SFFLFPGDPQPFFPY*WQPVFSCSNHSAAG Trigger: ACCAGCAGCTGAATGATTAGAACAGGAGAACACTGGTTGCCAGCAGTATGGAAAGAAAGGTTGGGGATCTCCAGGAAACAGAAAGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479230.5 |
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| CDS CCA 90 bp | TTCTTTCTGTTTCCTGGAGATCCCCAACCTTTCTTTCCATACTGCTaGCAACCAGTGTTCTCCTGTTCTAATCATTCAGCTGCTGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: FFLFPGDPQPFFPYC*QPVFSCSNHSAAGV Trigger: GACACCAGCAGCTGAATGATTAGAACAGGAGAACACTGGTTGCCAGCAGTATGGAAAGAAAGGTTGGGGATCTCCAGGAAACAGAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479230.5 |
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| CDS-3UTR CAA 90 bp | TCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGACATCTGCAACCAAGAGTCTCCAAATTCTCCTTaGGTACCAGATCTGATTTAT | + |
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Preference number: 5 (lower is better) Translates to: SVHSGQWPLLPEDICNQESPNSP*VPDLIY Trigger: ATAAATCAGATCTGGTACCAAAGGAGAATTTGGAGA...CTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS CCA 90 bp | AATACTTGCTGGACTTCGCAGAGCAAGCGCAGAGGAGGAATTAAGTaGAGATACGATGAAGCTCGGACTATCTATGATTGTGATCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: NTCWTSQSKRRGGIK*RYDEARTIYDCDLF Trigger: AAACAGATCACAATCATAGATAGTCCGAGCTTCATCGTATCTCCACTTAATTCCTCCTCTGCGCTTGCTCTGCGAAGTCCAGCAAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000496254.5 |
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| CDS-3UTR CAA 90 bp | TATAAGTACCAGCTTTTTCTGTCCACTCTGGACAATGGCCTCTTCTACCTGAGGGCTTTGTTCTCAGTTTaGCAAAGCCCAAACTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: YKYQLFLSTLDNGLFYLRALFSV*QSPNSF Trigger: AAAGGAGTTTGGGCTTTGCAAAACTGAGAACAAAGC...CCTCAGGTAGAAGAGGCCATTGTCCAGAGTGGACAGAAAAAGCTGGTACTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS TCA 90 bp | GGAGGCTTCAATCACCTTTTTAAGTTCTTGGCAGTACAGCTTCTTTaGATTCTGTTTGCCCGACTTGGCTTTGTTCTCAGTTTTGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: GGFNHLFKFLAVQLL*ILFARLGFVLSFAK Trigger: CTTTGCAAAACTGAGAACAAAGCCAAGTCGGGCAAACAGAATTCAAAGAAGCTGTACTGCCAAGAACTTAAAAAGGTGATTGAAGCCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000479230.5 ENST00000496254.5 |
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| CDS TCA 90 bp | CCTAGGCTAAGATACCTTTTTAAGTTCTTGGCAGTACAGCTTCTTTaGATTCTGTTTGCCCGACTTGGCTTTGTTCTCAGTTTTGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PRLRYLFKFLAVQLL*ILFARLGFVLSFAK Trigger: CTTTGCAAAACTGAGAACAAAGCCAAGTCGGGCAAACAGAATTCAAAGAAGCTGTACTGCCAAGAACTTAAAAAGGTATCTTAGCCTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492349.5 |
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| CDS TCA 90 bp | GAGCAGCATTCTTCTTTGCCTTCACACGCTAAAATTCCAAATAGTTaGATTATTCTGGCAACTTACCTGATAAATTTCAACAAACCCCAA | + |
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Preference number: 5 (lower is better) Translates to: EQHSSLPSHAKIPNS*IILATYLINFNKPQ Trigger: TTGGGGTTTGTTGAAATTTATCAGGTAAGTTGCCAGAATAATTCAACTATTTGGAATTTTAGCGTGTGAAGGCAAAGAAGAATGCTGCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496254.5 |
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| CDS CCA 72 bp | CAGAGACAAAGCCGTAGCCGTAGAAGAGCGTCGTGGTaGCTGCAGCAACTTCCAGACGTGGGTCCCTCCACG | + |
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Preference number: 6 (lower is better) Translates to: QRQSRSRRRASW*LQQLPDVGPST Trigger: CGTGGAGGGACCCACGTCTGGAAGTTGCTGCAGCCACCACGACGCTCTTCTACGGCTACGGCTTTGTCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394799.6 |
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| CDS CCA 72 bp | CAGCAGAGACAAAGCCGTAGCCGTAGAAGAGCGTCGTaGTGGCTGCAGCAACTTCCAGACGTGGGTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QQRQSRSRRRAS*WLQQLPDVGPS Trigger: GGAGGGACCCACGTCTGGAAGTTGCTGCAGCCACCACGACGCTCTTCTACGGCTACGGCTTTGTCTCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394799.6 |
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| CDS GCA 72 bp | TCCTTACGAAAATCTAGCCTAGTCTTCCCCACCCTCTaGCCGGCTTCGTTCCGCAGAATGAGCCCGCGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SLRKSSLVFPTL*PASFRRMSPRG Trigger: ACCGCGCGGGCTCATTCTGCGGAACGAAGCCGGGCAGAGGGTGGGGAAGACTAGGCTAGATTTTCGTAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000460073.1 ENST00000474423.1 |
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| CDS CAA 90 bp | CCCTCCACGCCCGCCTCCCGACCCCACTTACTAGGCCTTTTCATATaGGCTGTAGAAGGAAGCACAAACACATCAACCTGCCTCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PSTPASRPHLLGLFI*AVEGSTNTSTCLRW Trigger: CCAGCGGAGGCAGGTTGATGTGTTTGTGCTTCCTTCTACAGCCAATATGAAAAGGCCTAGTAAGTGGGGTCGGGAGGCGGGCGTGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394799.6 |
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| CDS CCA 72 bp | TGGGCCAGTCTGCACGTGGCCACGGAAAGAAAATATTaGGCCTCAAACCTGGCTCAGACGCTGCTTCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: WASLHVATERKY*ASNLAQTLLPY Trigger: GTAAGGAAGCAGCGTCTGAGCCAGGTTTGAGGCCCAATATTTTCTTTCCGTGGCCACGTGCAGACTGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460073.1 ENST00000474423.1 |
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| CDS CAA 72 bp | CTGGGCCAGTCTGCACGTGGCCACGGAAAGAAAATATaGGGCCTCAAACCTGGCTCAGACGCTGCTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: LGQSARGHGKKI*GLKPGSDAASL Trigger: TAAGGAAGCAGCGTCTGAGCCAGGTTTGAGGCCCAATATTTTCTTTCCGTGGCCACGTGCAGACTGGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460073.1 ENST00000474423.1 |
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| CDS CCA 72 bp | TTCGATGATGTTCTCGAACCTGGGCCAGTCTGCACGTaGCCACGGAAAGAAAATATTGGGCCTCAAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: FDDVLEPGPVCT*PRKENIGPQTW Trigger: CCAGGTTTGAGGCCCAATATTTTCTTTCCGTGGCCACGTGCAGACTGGCCCAGGTTCGAGAACATCATCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460073.1 |
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| CDS CAA 72 bp | CCCGCCTCCCGACCCCACTTACTAGGCCTTTTCATATaGGCTGTAGAAGGAAGCACAAACACATCAACCTGC | + |
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Preference number: 6 (lower is better) Translates to: PASRPHLLGLFI*AVEGSTNTSTC Trigger: GCAGGTTGATGTGTTTGTGCTTCCTTCTACAGCCAATATGAAAAGGCCTAGTAAGTGGGGTCGGGAGGCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394799.6 |
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| CDS CAA 90 bp | TTCTCGAACCTGGGCCAGTCTGCACGTGGCCACGGAAAGAAAATATaGGGCCTCAAACCTGGCTCAGACGCTGCTTCCTTACGAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: FSNLGQSARGHGKKI*GLKPGSDAASLRKS Trigger: AGATTTTCGTAAGGAAGCAGCGTCTGAGCCAGGTTTGAGGCCCAATATTTTCTTTCCGTGGCCACGTGCAGACTGGCCCAGGTTCGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460073.1 |
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| CDS CAA 72 bp | CACTGGCAGCCTCCATCGGTTTTACTACTTCAATACTaGCTGGACTTCGCAGAGCAAGCGCAGAGGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: HWQPPSVLLLQY*LDFAEQAQRRN Trigger: ATTCCTCCTCTGCGCTTGCTCTGCGAAGTCCAGCAAGTATTGAAGTAGTAAAACCGATGGAGGCTGCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000496254.5 |
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| CDS CAA 90 bp | TCTTTAACTCTGGGCCAGTCTGCACGTGGCCACGGAAAGAAAATATaGGGCCTCAAACCTGGCTCAGACGCTGCTTCCTTACGAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: SLTLGQSARGHGKKI*GLKPGSDAASLRKS Trigger: AGATTTTCGTAAGGAAGCAGCGTCTGAGCCAGGTTTGAGGCCCAATATTTTCTTTCCGTGGCCACGTGCAGACTGGCCCAGAGTTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474423.1 |
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| CDS GCA 72 bp | ACTGGCAGCCTCCATCGGTTTTACTACTTCAATACTTaGTGGACTTCGCAGAGCAAGCGCAGAGGAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: TGSLHRFYYFNT*WTSQSKRRGGI Trigger: AATTCCTCCTCTGCGCTTGCTCTGCGAAGTCCAGCAAGTATTGAAGTAGTAAAACCGATGGAGGCTGCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000496254.5 |
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| CDS CCA 72 bp | AAGAGCCTCCTTAAAGGGAGCACTGTTTGGAACTCCTaGGTCTTTCCTAGGCTTCTTGTGACCCCGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: KSLLKGSTVWNS*VFPRLLVTPLF Trigger: AAAAAGCGGGGTCACAAGAAGCCTAGGAAAGACCCAGGAGTTCCAAACAGTGCTCCCTTTAAGGAGGCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000460073.1 ENST00000462550.5 ENST00000468146.5 ENST00000474423.1 ENST00000479230.5 ENST00000492349.5 ENST00000496254.5 |
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| CDS CCA 72 bp | GGCAGCCTCCATCGGTTTTACTACTTCAATACTTGCTaGACTTCGCAGAGCAAGCGCAGAGGAGGAATTAAG | + |
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Preference number: 6 (lower is better) Translates to: GSLHRFYYFNTC*TSQSKRRGGIK Trigger: CTTAATTCCTCCTCTGCGCTTGCTCTGCGAAGTCCAGCAAGTATTGAAGTAGTAAAACCGATGGAGGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000496254.5 |
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| CDS CCA 72 bp | TTACTTGCTTTCTTTAACTCTGGGCCAGTCTGCACGTaGCCACGGAAAGAAAATATTGGGCCTCAAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLAFFNSGPVCT*PRKENIGPQTW Trigger: CCAGGTTTGAGGCCCAATATTTTCTTTCCGTGGCCACGTGCAGACTGGCCCAGAGTTAAAGAAAGCAAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474423.1 |
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| CDS CAA 72 bp | GGATTTTATACCGCTTATGGCAGGTCATGCGTTTACTaGCTTTCTTTAACTCTGGGCCAGTCTGCACGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GFYTAYGRSCVY*LSLTLGQSARG Trigger: GCCACGTGCAGACTGGCCCAGAGTTAAAGAAAGCAAGTAAACGCATGACCTGCCATAAGCGGTATAAAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474423.1 |
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| CDS CCA 72 bp | TGGACTTCGCAGAGCAAGCGCAGAGGAGGAATTAAGTaGAGATACGATGAAGCTCGGACTATCTATGATTGT | + |
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Preference number: 6 (lower is better) Translates to: WTSQSKRRGGIK*RYDEARTIYDC Trigger: ACAATCATAGATAGTCCGAGCTTCATCGTATCTCCACTTAATTCCTCCTCTGCGCTTGCTCTGCGAAGTCCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000496254.5 |
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| CDS GCA 72 bp | CTGTTTCCTGGAGATCCCCAACCTTTCTTTCCATACTaGTGGCAACCAGTGTTCTCCTGTTCTAATCATTCA | + |
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Preference number: 6 (lower is better) Translates to: LFPGDPQPFFPY*WQPVFSCSNHS Trigger: TGAATGATTAGAACAGGAGAACACTGGTTGCCAGCAGTATGGAAAGAAAGGTTGGGGATCTCCAGGAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479230.5 |
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| CDS CCA 72 bp | GGCAGTACAGCTTCTTTGAATTCTGTTTGCCCGACTTaGCTTTGTTCTCAGTTTTGCAAAGCCCAAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: GSTASLNSVCPT*LCSQFCKAQTP Trigger: AGGAGTTTGGGCTTTGCAAAACTGAGAACAAAGCCAAGTCGGGCAAACAGAATTCAAAGAAGCTGTACTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000460073.1 ENST00000468146.5 ENST00000479230.5 ENST00000492349.5 ENST00000496254.5 |
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| CDS GCA 72 bp | GCAGACTTCACTTCTGAATGGAGCAGCATTCTTCTTTaGCTTCACACGCTTGGTTATCTTCCCTTTATCCTT | + |
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Preference number: 6 (lower is better) Translates to: ADFTSEWSSILL*LHTLGYLPFIL Trigger: AAGGATAAAGGGAAGATAACCAAGCGTGTGAAGGCAAAGAAGAATGCTGCTCCATTCAGAAGTGAAGTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000484022.1 |
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| CDS GCA 72 bp | CATTTGGGAAACCAATTACTCCAACCCGAATGGCTTTaGTGCAAGTTTCCTGAAAACCTCCAAGAAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: HLGNQLLQPEWL*CKFPENLQEVS Trigger: GGAAACTTCTTGGAGGTTTTCAGGAAACTTGCAGCAAAGCCATTCGGGTTGGAGTAATTGGTTTCCCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000484022.1 ENST00000496254.5 |
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| CDS CAA 72 bp | GGATTTTATACCGCTTATGGCAGGTCATGCGTTTACTaGCTTTCTTTAACTCAGCAGAGACAAAGCCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: GFYTAYGRSCVY*LSLTQQRQSRS Trigger: GCTACGGCTTTGTCTCTGCTGAGTTAAAGAAAGCAAGTAAACGCATGACCTGCCATAAGCGGTATAAAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394799.6 |
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| CDS CAA 72 bp | GAATTCTGTTTGCCCGACTTGGCTTTGTTCTCAGTTTaGCAAAGCCCAAACTCCTTTTCCATAGGTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: EFCLPDLALFSV*QSPNSFSIGST Trigger: TGTGGAACCTATGGAAAAGGAGTTTGGGCTTTGCAAAACTGAGAACAAAGCCAAGTCGGGCAAACAGAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000460073.1 ENST00000468146.5 ENST00000479230.5 ENST00000492349.5 ENST00000496254.5 |
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| CDS CAA 72 bp | TTTGGCAGCACCTTCAACATTTGGGATTCCACCTTTTaGGTGCATACCTCTTCTCTGAGCAAGCACAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: FGSTFNIWDSTF*VHTSSLSKHSK Trigger: TTTACTGTGCTTGCTCAGAGAAGAGGTATGCACCAAAAAGGTGGAATCCCAAATGTTGAAGGTGCTGCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394799.6 ENST00000418458.6 ENST00000496254.5 ENST00000497356.1 |
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| CDS CAA 72 bp | GCAAAGGAACAGGGCAAAATCAGTTTAGCAATGTGTTaGGTACAGCTCTCTCAAGCACTACACTTACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: AKEQGKISLAMC*VQLSQALHLPF Trigger: AAAAGGTAAGTGTAGTGCTTGAGAGAGCTGTACCAAACACATTGCTAAACTGATTTTGCCCTGTTCCTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468885.1 |
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| CDS GCA 72 bp | GCAGACTTCACTTCTGAATGGAGCAGCATTCTTCTTTaGCTTCACACGCTAAAATTCCAAATAGTTGAATTA | + |
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Preference number: 6 (lower is better) Translates to: ADFTSEWSSILL*LHTLKFQIVEL Trigger: TAATTCAACTATTTGGAATTTTAGCGTGTGAAGGCAAAGAAGAATGCTGCTCCATTCAGAAGTGAAGTCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496254.5 |
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| CDS CAA 90 bp | CAAAATCTGAAAGAATCACATTTCTTACCACTAATAAAGGATACCTaGGTTATCTTCCCTTTATCCTTTGGTTTTGTTGAGGCTCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: QNLKESHFLPLIKDT*VIFPLSFGFVEALN Trigger: GTTCAGAGCCTCAACAAAACCAAAGGATAAAGGGAAGATAACCAAGGTATCCTTTATTAGTGGTAAGAAATGTGATTCTTTCAGATTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496254.5 |
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| CDS CAA 72 bp | CATTGCCTTTCAGATGATCTCTGGCTGAAATCAGAGTaGGATCTTGTAATTTTTCATTCACTTAAATCAAGA | + |
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Preference number: 6 (lower is better) Translates to: HCLSDDLWLKSE*DLVIFHSLKSR Trigger: TCTTGATTTAAGTGAATGAAAAATTACAAGATCCAACTCTGATTTCAGCCAGAGATCATCTGAAAGGCAATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000496254.5 |
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