RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000204590, ENSG00000206492, ENSG00000228581, ENSG00000232143, ENSG00000235986

Ensembl transcript IDs: ENST00000376621.7, ENST00000376621.8, ENST00000383450.3, ENST00000383596.6, ENST00000416639.1, ENST00000417834.5, ENST00000428189.5, ENST00000430236.1, ENST00000433809.1, ENST00000435788.1, ENST00000437917.5, ENST00000441604.5, ENST00000443235.1, ENST00000450423.1, ENST00000454829.5, ENST00000456550.1, ENST00000458592.1, ENST00000462708.1, ENST00000464231.1, ENST00000465483.1, ENST00000467241.1, ENST00000467550.1, ENST00000469494.1, ENST00000478748.1, ENST00000478986.1, ENST00000479883.1, ENST00000480572.1, ENST00000481380.1, ENST00000481420.1, ENST00000483987.1, ENST00000486264.1, ENST00000487166.1, ENST00000487687.1, ENST00000488456.1, ENST00000489631.1, ENST00000490227.1, ENST00000492408.1, ENST00000495838.1, ENST00000496960.1, ENST00000497332.1, ENST00000497917.1

Found 1599 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATaGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCA +
Preference number: 1 (lower is better)
Translates to: CPPLLPDQYPNVPPI*SHHYPTGSCTTLLP
Trigger: TGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 90 bp ATTTCAGAGTGCTTCAAGATGAAGGCGCAAAGCAGCCTCTCAGCCTaGAGTGATGCTACGACACCGGCAGATGGCGCTGCAAAGCTTCTC +
Preference number: 1 (lower is better)
Translates to: ISECFKMKAQSSLSA*SDATTPADGAAKLL
Trigger: GAGAAGCTTTGCAGCGCCATCTGCCGGTGTCGTAGCATCACTGCAGGCTGAGAGGCTGCTTTGCGCCTTCATCTTGAAGCACTCTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 90 bp CCATGGTCAAGTATTCACATAGTAGACATGACCCAGACAAGAGGGTaGGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGT +
Preference number: 1 (lower is better)
Translates to: PWSSIHIVDMTQTRG*VFQRGGETGPLVSC
Trigger: ACAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGAATACTTGACCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTaGAGGGGAGACTGGGCCCTTGGTTTCCTGTGTCTTTGTAGTCAG +
Preference number: 1 (lower is better)
Translates to: SHSRHDPDKRVRISA*RGDWALGFLCLCSQ
Trigger: CTGACTACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 90 bp AAGAGACTAGCCAGCTATGGAAGCCACCAGAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTAGACATGACCCAGACAAGAGGGTGC +
Preference number: 1 (lower is better)
Translates to: KRLASYGSHQSPRPP*SSIHIVDMTQTRGC
Trigger: GCACCCTCTTGTCTGGGTCATGTCTACTATGTGAATACTTGACCATGGAGGTCTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 90 bp ATCTTTGTTCCACCCCCAAACCAGAGTAAATGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCC +
Preference number: 1 (lower is better)
Translates to: IFVPPPNQSKWNSGG*FCARPYVPQILVAA
Trigger: GGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGGGGGTGGAACAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 90 bp ATGAGAGAAGCCCTGATTTCTCTCCATCAAGAGACTAGCCAGCTATaGAAGCCACCAGAGCCCCAGACCTCCATGGTCAAGTATTCACAT +
Preference number: 1 (lower is better)
Translates to: MREALISLHQETSQL*KPPEPQTSMVKYSH
Trigger: ATGTGAATACTTGACCATGGAGGTCTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTCTTGATGGAGAGAAATCAGGGCTTCTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 90 bp CAGTCTTCCAAAGTTGTCATGTTTCTTGACCTTTGCTGTCTCCTCTaGCCAGAATGCAATTTCCCTGTCTGGCTAACTCCTGTCCAGCAT +
Preference number: 1 (lower is better)
Translates to: QSSKVVMFLDLCCLL*PECNFPVWLTPVQH
Trigger: ATGCTGGACAGGAGTTAGCCAGACAGGGAAATTGCATTCTGGGCAGAGGAGACAGCAAAGGTCAAGAAACATGACAACTTTGGAAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 90 bp CTGAACAAGTTACAGTCTTCCAAAGTTGTCATGTTTCTTGACCTTTaGTGTCTCCTCTGCCCAGAATGCAATTTCCCTGTCTGGCTAACT +
Preference number: 1 (lower is better)
Translates to: LNKLQSSKVVMFLDL*CLLCPECNFPVWLT
Trigger: AGTTAGCCAGACAGGGAAATTGCATTCTGGGCAGAGGAGACAGCAAAGGTCAAGAAACATGACAACTTTGGAAGACTGTAACTTGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 90 bp GGCTTCAAATTTAGGTCAGGCTCTGGTGGTACATCCTTATATGCTTaGTGCTCAGCACAGGTCAAGACACACAATAGACCCTCAATAAAT +
Preference number: 1 (lower is better)
Translates to: GFKFRSGSGGTSLYA*CSAQVKTHNRPSIN
Trigger: ATTTATTGAGGGTCTATTGTGTGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGATGTACCACCAGAGCCTGACCTAAATTTGAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 90 bp CAATATGTGGCCAAACACCTTAGCCTCTTTAAATATACTTTCCTTTaGTCCTTGGTTAACAGGGTCTGTCTGCTCGCATTAGAGAAACTG +
Preference number: 1 (lower is better)
Translates to: QYVAKHLSLFKYTFL*SLVNRVCLLALEKL
Trigger: CAGTTTCTCTAATGCGAGCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGTATATTTAAAGAGGCTAAGGTGTTTGGCCACATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR TCA 90 bp TCAAGTACATTCTCATGCTGGTATTATTTAAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCCACACTGAGACCAATGGAGATGAAC +
Preference number: 1 (lower is better)
Translates to: SSTFSCWYYLNFALE*IPGVMSTLRPMEMN
Trigger: GTTCATCTCCATTGGTCTCAGTGTGGACATAACTCCTGGAATTCACTCCAGTGCAAAGTTTAAATAATACCAGCATGAGAATGTACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 90 bp TGGGAAACCTTCAAGTACATTCTCATGCTGGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGGAGTTATGTCCACACTGAGACCAAT +
Preference number: 1 (lower is better)
Translates to: WETFKYILMLVLFKL*TGVNSRSYVHTETN
Trigger: ATTGGTCTCAGTGTGGACATAACTCCTGGAATTCACTCCAGTGCAAAGTTTAAATAATACCAGCATGAGAATGTACTTGAAGGTTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGAGACTAGCCAGCTATaGAAGCCACCAGAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPETSQL*KPPEPQ
Trigger: CTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCAGGAAACAGACCCATaGCCCACCCAGTTGCCAAGT +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPQETDP*PTQLPS
Trigger: ACTTGGCAACTGGGTGGGTCATGGGTCTGTTTCCTG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGGGGGTGTCAGGAGTTaGCTCCTGCCAGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAGGVRS*LLPGLQ
Trigger: CTGAAGACCTGGCAGGAGGCAACTCCTGACACCCCC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGTGCGTATTTCAGCGTaGAGGGGAGACTGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQVRISA*RGDWAL
Trigger: AAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCAC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGAGCGGAGAAGTCCCCTaGGCATCTCTGAACATCATG +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLSGEVP*ASLNIM
Trigger: CATGATGTTCAGAGATGCTCAGGGGACTTCTCCGCT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGCACACAGGGCTGCTaGTCAAATCGGAGAATGGCA +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGTQGC*SNRRMA
Trigger: TGCCATTCTCCGATTTGAGCAGCAGCCCTGTGTGCC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNRRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGGGGTGTCAGGAGTTaGCTCCTGCCAGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEGGVRS*LLPGLQ
Trigger: CTGAAGACCTGGCAGGAGGCAACTCCTGACACCCCC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 2 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGTGCGTATTTCAGCGTaGAGGGGAGACTGGGCCCTT +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNVRISA*RGDWAL
Trigger: AAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCAC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGAGACTAGCCAGCTATaGAAGCCACCAGAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAETSQL*KPPEPQ
Trigger: CTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGGCTGTAAAAGCCTCTaGTTTCTCCCCTTTCCAAAC +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPGCKSL*FLPFPN
Trigger: GTTTGGAAAGGGGAGAAATCAGAGGCTTTTACAGCC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCAAAAGCAAAGATACTaGGAGGGAAGATGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLQKQRY*EGRWRW
Trigger: CCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGESPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTCAGGCACTGGTGTTaGGGCCCTATTCATCCTCAT +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLRHWC*GPIHPH
Trigger: ATGAGGATGAATAGGGCCCCAACACCAGTGCCTGAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTTCATTCTCTCTCCCTaGGATGGCTGTAAAAGCCTC +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPFILSP*DGCKSL
Trigger: GAGGCTTTTACAGCCATCCCAGGGAGAGAGAATGAA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 90 bp CAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTAGTCAGTTCTAACCTCAGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: QTRGCVFQRGGETGP*VSCVFVVSSNLSLR
Trigger: CCTGAGGCTGAGGTTAGAACTGACTACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGCCGAAATGCTGAGGTaGAACCCTAAAATGGTTCTG +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLAEMLR*NPKMVL
Trigger: CAGAACCATTTTAGGGTTTCACCTCAGCATTTCGGC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCC +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPNFALE*IPGVMS
Trigger: GGACATAACTCCTGGAATTCACTCCAGTGCAAAGTT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAGCGGAGAAGTCCCCTaGGCATCTCTGAACATCATG +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSGEVP*ASLNIM
Trigger: CATGATGTTCAGAGATGCTCAGGGGACTTCTCCGCT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGRRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCAGCAAAGCCTAAGGTaGCCTGACTCACGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEQQSLR*PDSRES
Trigger: GCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAACCAGTCTCCACACTaGAACCATAGTGATCTAAGG +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPNQSPH*NHSDLR
Trigger: CCTTAGATCACTATGGTTGCAGTGTGGAGACTGGTT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 2 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCTTTCCTTTGCTCCTTaGTTAACAGGGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLLSFAP*LTGSVC
Trigger: GCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGELSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATT +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEKPKVP*LTRELI
Trigger: AATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGCGGAGAAGTCCCCTaGGCATCTCTGAACATCATG +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGESGEVP*ASLNIM
Trigger: CATGATGTTCAGAGATGCTCAGGGGACTTCTCCGCT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTTACCACTTGGAAGTaGCTGGCAGGTAGTAATTGC +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLTTWK*LAGSNC
Trigger: GCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGGCACACAGGGCTGCTaGTCAAATCGGAGAATGGCA +
Preference number: 2 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFGTQGC*SNRRMA
Trigger: TGCCATTCTCCGATTTGAGCAGCAGCCCTGTGTGCC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDRRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGAGAGAGCTGATTTCTaGCGAAATGCTGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLERADF*RNAEVK
Trigger: TTTCACCTCAGCATTTCGGCAGAAATCAGCTCTCTC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPLFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTGCAGAGTGGGAGAATaGGTAGAGGAAGCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGACRVGE*VEEAGF
Trigger: GAAACCTGCTTCCTCTACCCATTCTCCCACTCTGCA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGCTCAAATCGGAGAATaGCACAAACTCCAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLAQIGE*HKLQKG
Trigger: TCCCTTTTGGAGTTTGTGCCATTCTCCGATTTGAGC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTACAGTCTAACCCTGTaGGGGTGTCAGGAGTTGCCT +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEYSLTL*GCQELP
Trigger: AGGCAACTCCTGACACCCCCACAGGGTTAGACTGTA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCTCAGGCACTGGTGTTaGGGCCCTATTCATCCTCAT +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGELRHWC*GPIHPH
Trigger: ATGAGGATGAATAGGGCCCCAACACCAGTGCCTGAG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGCCGAAATGCTGAGGTaGAACCCTAAAATGGTTCTG +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNAEMLR*NPKMVL
Trigger: CAGAACCATTTTAGGGTTTCACCTCAGCATTTCGGC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATT +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGKPKVP*LTRELI
Trigger: AATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAAAGGGCCAGATAATTaGACTATCCTGGACCACACA +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQKGPDN*TILDHT
Trigger: TGTGTGGTCCAGGATAGTTCAATTATCTGGCCCTTT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGTCAATTCTATCTCCTaGGCAACCCATAAAACGATT +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPVNSIS*ATHKTI
Trigger: AATCGTTTTATGGGTTGCTCAGGAGATAGAATTGAC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGAGAGAGCTGATTTCTaGCGAAATGCTGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQERADF*RNAEVK
Trigger: TTTCACCTCAGCATTTCGGCAGAAATCAGCTCTCTC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCAGCAAAGCCTAAGGTaGCCTGACTCACGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDQQSLR*PDSRES
Trigger: GCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGGGGTGTCAGGAGTTaGCTCCTGCCAGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGGVRS*LLPGLQ
Trigger: CTGAAGACCTGGCAGGAGGCAACTCCTGACACCCCC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGGGGGTGTCAGGAGTTaGCTCCTGCCAGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSGGVRS*LLPGLQ
Trigger: CTGAAGACCTGGCAGGAGGCAACTCCTGACACCCCC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLLFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGESPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTATGAAACCCCTGAGGTaGAAAAAGATAAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPMKPLR*KKIKTS
Trigger: GCTTGTCTTTATCTTTTTCCACCTCAGGGGTTTCAT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATACAGTCTAACCCTGTaGGGGTGTCAGGAGTTGCCT +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGYSLTL*GCQELP
Trigger: AGGCAACTCCTGACACCCCCACAGGGTTAGACTGTA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAGAGTCAGCAAGTCATaGAAGAGGTTTTACAGTCTA +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPRVSKS*KRFYSL
Trigger: TAGACTGTAAAACCTCTTCCATGACTTGCTGACTCT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACTCAGGCACTGGTGTTaGGGCCCTATTCATCCTCAT +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGLRHWC*GPIHPH
Trigger: ATGAGGATGAATAGGGCCCCAACACCAGTGCCTGAG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTA +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSPRPP*SSIHIV
Trigger: TACTATGTGAATACTTGACCATGGAGGTCTGGGGCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCCACTTGGAAGTGACTaGCAGGTAGTAATTGCTCAA +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQPLGSD*QVVIAQ
Trigger: TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGCCGAAATGCTGAGGTaGAACCCTAAAATGGTTCTG +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEAEMLR*NPKMVL
Trigger: CAGAACCATTTTAGGGTTTCACCTCAGCATTTCGGC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTTTCTGCCGAAATGCTaGGGTGAAACCCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAFLPKC*GETLKW
Trigger: CCATTTTAGGGTTTCACCTCAGCATTTCGGCAGAAA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATT +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDKPKVP*LTRELI
Trigger: AATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAGCGGAGAAGTCCCCTaGGCATCTCTGAACATCATG +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSGEVP*ASLNIM
Trigger: CATGATGTTCAGAGATGCTCAGGGGACTTCTCCGCT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAAGTTGACATCTAAATaGAATTCCAGCATGGATGAG +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPKLTSK*NSSMDE
Trigger: CTCATCCATGCTGGAATTTCATTTAGATGTCAACTT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAAAGGGCCAGATAATTaGACTATCCTGGACCACACA +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAKGPDN*TILDHT
Trigger: TGTGTGGTCCAGGATAGTTCAATTATCTGGCCCTTT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAAAGGGCCAGATAATTaGACTATCCTGGACCACACA +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNKGPDN*TILDHT
Trigger: TGTGTGGTCCAGGATAGTTCAATTATCTGGCCCTTT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLRRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSRRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTGCAGAGTGGGAGAATaGGTAGAGGAAGCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFCRVGE*VEEAGF
Trigger: GAAACCTGCTTCCTCTACCCATTCTCCCACTCTGCA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATGCAGAGTGGGAGAATaGGTAGAGGAAGCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGCRVGE*VEEAGF
Trigger: GAAACCTGCTTCCTCTACCCATTCTCCCACTCTGCA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGATGAAACCCCTGAGGTaGAAAAAGATAAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLMKPLR*KKIKTS
Trigger: GCTTGTCTTTATCTTTTTCCACCTCAGGGGTTTCAT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTACAGTCTAACCCTGTaGGGGTGTCAGGAGTTGCCT +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDYSLTL*GCQELP
Trigger: AGGCAACTCCTGACACCCCCACAGGGTTAGACTGTA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTCAGGCACTGGTGTTaGGGCCCTATTCATCCTCAT +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLRHWC*GPIHPH
Trigger: ATGAGGATGAATAGGGCCCCAACACCAGTGCCTGAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTA +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASPRPP*SSIHIV
Trigger: TACTATGTGAATACTTGACCATGGAGGTCTGGGGCT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTA +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSPRPP*SSIHIV
Trigger: TACTATGTGAATACTTGACCATGGAGGTCTGGGGCT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGATAATTGAACTATCCTaGACCACACACAGCTACCCT +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQIIELS*TTHSYP
Trigger: AGGGTAGCTGTGTGTGGTCCAGGATAGTTCAATTAT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCCGAAATGCTGAGGTaGAACCCTAAAATGGTTCTG +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGAEMLR*NPKMVL
Trigger: CAGAACCATTTTAGGGTTTCACCTCAGCATTTCGGC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTTTCTGCCGAAATGCTaGGGTGAAACCCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEFLPKC*GETLKW
Trigger: CCATTTTAGGGTTTCACCTCAGCATTTCGGCAGAAA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCAGGAAACAGACCCATaGCCCACCCAGTTGCCAAGT +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSQETDP*PTQLPS
Trigger: ACTTGGCAACTGGGTGGGTCATGGGTCTGTTTCCTG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCAGGAAACAGACCCATaGCCCACCCAGTTGCCAAGT +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSQETDP*PTQLPS
Trigger: ACTTGGCAACTGGGTGGGTCATGGGTCTGTTTCCTG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGCACACAGGGCTGCTaGTCAAATCGGAGAATGGCA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGTQGC*SNRRMA
Trigger: TGCCATTCTCCGATTTGAGCAGCAGCCCTGTGTGCC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVRRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGAAATATACTTTCCTTTaGTCCTTGGTTAACAGGGTC +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLKYTFL*SLVNRV
Trigger: GACCCTGTTAACCAAGGAGCAAAGGAAAGTATATTT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPVLFKL*TGVNSR
Trigger: CCTGGAATTCACTCCAGTGCAAAGTTTAAATAATAC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGATTCCTACCCTCTATTaGTTGAGAGTAGGATATTGC +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQIPTLY*LRVGYC
Trigger: GCAATATCCTACTCTCAAGCAATAGAGGGTAGGAAT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCAAAAGCAAAGATACTaGGAGGGAAGATGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDQKQRY*EGRWRW
Trigger: CCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGCTCAAATCGGAGAATaGCACAAACTCCAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEAQIGE*HKLQKG
Trigger: TCCCTTTTGGAGTTTGTGCCATTCTCCGATTTGAGC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGAGACTAGCCAGCTATaGAAGCCACCAGAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVETSQL*KPPEPQ
Trigger: CTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTGCCTTATTCAATTTTaGTTATTGTCCCAGAACTCA +
Preference number: 2 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPCLIQF*LLSQNS
Trigger: TGAGTTCTGGGACAATAACCAAAATTGAATAAGGCA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 90 bp CAAATCTCTGTCTCCAGCCACGACCTCTCTTTCCCCAAGCTCCATTaGCATAAACTGTCTCTGATGAGATTTAGGGCGCTTACGGTGGTA +
Preference number: 2 (lower is better)
Translates to: QISVSSHDLSFPKLH*HKLSLMRFRALTVV
Trigger: TACCACCGTAAGCGCCCTAAATCTCATCAGAGACAGTTTATGCAAATGGAGCTTGGGGAAAGAGAGGTCGTGGCTGGAGACAGAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATTTCTGCCGAAATGCTaGGGTGAAACCCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGFLPKC*GETLKW
Trigger: CCATTTTAGGGTTTCACCTCAGCATTTCGGCAGAAA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATT +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLKPKVP*LTRELI
Trigger: AATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCC +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGNFALE*IPGVMS
Trigger: GGACATAACTCCTGGAATTCACTCCAGTGCAAAGTT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTCAACAAATGTTCTATaGGTGAATGAATCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSTNVL*VNESLG
Trigger: TCCCAAGGATTCATTCACTCATAGAACATTTGTTGA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFSLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 2 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGAGAGCTGATTTCTaGCGAAATGCTGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGERADF*RNAEVK
Trigger: TTTCACCTCAGCATTTCGGCAGAAATCAGCTCTCTC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLSNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCAGTTCTTTTCCTGTTaGTATTATCCTATAGAGTCA +
Preference number: 2 (lower is better)
Translates to: DKRVRISAWRGDWALGFLQFFSC*YYPIES
Trigger: TGACTCTATAGGATAATAGCAACAGGAAAAGAACTG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACATTCCTACCCTCTATTaGTTGAGAGTAGGATATTGC +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNIPTLY*LRVGYC
Trigger: GCAATATCCTACTCTCAAGCAATAGAGGGTAGGAAT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCATTCCTACCCTCTATTaGTTGAGAGTAGGATATTGC +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAIPTLY*LRVGYC
Trigger: GCAATATCCTACTCTCAAGCAATAGAGGGTAGGAAT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTTTCCTTTGCTCCTTaGTTAACAGGGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLSFAP*LTGSVC
Trigger: GCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACATGAAACCCCTGAGGTaGAAAAAGATAAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNMKPLR*KKIKTS
Trigger: GCTTGTCTTTATCTTTTTCCACCTCAGGGGTTTCAT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTACAGTCTAACCCTGTaGGGGTGTCAGGAGTTGCCT +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSYSLTL*GCQELP
Trigger: AGGCAACTCCTGACACCCCCACAGGGTTAGACTGTA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAGAGTCAGCAAGTCATaGAAGAGGTTTTACAGTCTA +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGARVSKS*KRFYSL
Trigger: TAGACTGTAAAACCTCTTCCATGACTTGCTGACTCT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCTCAGGCACTGGTGTTaGGGCCCTATTCATCCTCAT +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLRHWC*GPIHPH
Trigger: ATGAGGATGAATAGGGCCCCAACACCAGTGCCTGAG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAATGAAATTCCAGCATaGATGAGAGAAGCCCTGATT +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGANEIPA*MREALI
Trigger: AATCAGGGCTTCTCTCATCCATGCTGGAATTTCATT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAATGAAATTCCAGCATaGATGAGAGAAGCCCTGATT +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNNEIPA*MREALI
Trigger: AATCAGGGCTTCTCTCATCCATGCTGGAATTTCATT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 90 bp CCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTaGACTTGTCTCTCTCCCCTACACAGCAAAACAATCCCAAGACAT +
Preference number: 2 (lower is better)
Translates to: PMTHPVAKSETGCIL*TCLSPLHSKTIPRH
Trigger: ATGTCTTGGGATTGTTTTGCTGTGTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGCGGAGAAGTCCCCTaGGCATCTCTGAACATCATG +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSGEVP*ASLNIM
Trigger: CATGATGTTCAGAGATGCTCAGGGGACTTCTCCGCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCTAGGACGCTTCCCCTaGTTCACCAAGACCAGCTTA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLGRFP*FTKTSL
Trigger: TAAGCTGGTCTTGGTGAATCAGGGGAAGCGTCCTAG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAGTTGTCATGTTTCTTaGCCTTTGCTGTCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSCHVS*PLLSPL
Trigger: CAGAGGAGACAGCAAAGGTCAAGAAACATGACAACT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTGCACCCTCTGCCTCTaGACAAGTTACAGTCTTCCA +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSCTLCL*TSYSLP
Trigger: TGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGGCACACAGGGCTGCTaGTCAAATCGGAGAATGGCA +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQGTQGC*SNRRMA
Trigger: TGCCATTCTCCGATTTGAGCAGCAGCCCTGTGTGCC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGAGAGAGCTGATTTCTaGCGAAATGCTGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDERADF*RNAEVK
Trigger: TTTCACCTCAGCATTTCGGCAGAAATCAGCTCTCTC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGGGGGTGTCAGGAGTTaGCTCCTGCCAGGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDGGVRS*LLPGLQ
Trigger: CTGAAGACCTGGCAGGAGGCAACTCCTGACACCCCC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGLFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCAAAAGCAAAGATACTaGGAGGGAAGATGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSQKQRY*EGRWRW
Trigger: CCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCAAAAGCAAAGATACTaGGAGGGAAGATGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLQKQRY*EGRWRW
Trigger: CCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLSPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTGCAGAGTGGGAGAATaGGTAGAGGAAGCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSCRVGE*VEEAGF
Trigger: GAAACCTGCTTCCTCTACCCATTCTCCCACTCTGCA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGATGAAACCCCTGAGGTaGAAAAAGATAAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEMKPLR*KKIKTS
Trigger: GCTTGTCTTTATCTTTTTCCACCTCAGGGGTTTCAT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 90 bp GACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTaGTCTCTCTCCCCTACACAGCAAAACAATCCCAAGACATGTCAA +
Preference number: 2 (lower is better)
Translates to: DPPSCQVRNRMYTLD*SLSPTQQNNPKTCQ
Trigger: TTGACATGTCTTGGGATTGTTTTGCTGTGTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGCCGAAATGCTGAGGTaGAACCCTAAAATGGTTCTG +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLAEMLR*NPKMVL
Trigger: CAGAACCATTTTAGGGTTTCACCTCAGCATTTCGGC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATT +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQKPKVP*LTRELI
Trigger: AATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCAGGATGTATACTCTTaGCTTGTCTCTCTCCCCTAC +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSQDVYS*LVSLPY
Trigger: GTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGGCACACAGGGCTGCTaGTCAAATCGGAGAATGGCA +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFGTQGC*SNRRMA
Trigger: TGCCATTCTCCGATTTGAGCAGCAGCCCTGTGTGCC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGELKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCAGCAAAGCCTAAGGTaGCCTGACTCACGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFQQSLR*PDSRES
Trigger: GCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAAATATACTTTCCTTTaGTCCTTGGTTAACAGGGTC +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEKYTFL*SLVNRV
Trigger: GACCCTGTTAACCAAGGAGCAAAGGAAAGTATATTT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAVLFKL*TGVNSR
Trigger: CCTGGAATTCACTCCAGTGCAAAGTTTAAATAATAC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCAGTTCTTTTCCTGTTaGTATTATCCTATAGAGTCA +
Preference number: 2 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAQFFSC*YYPIES
Trigger: TGACTCTATAGGATAATAGCAACAGGAAAAGAACTG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCAGTTCTTTTCCTGTTaGTATTATCCTATAGAGTCA +
Preference number: 2 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNQFFSC*YYPIES
Trigger: TGACTCTATAGGATAATAGCAACAGGAAAAGAACTG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTTCCTCAGCCTTCTCTaGTCCCCACACCTATATGTT +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSFLSLL*SPHLYV
Trigger: AACATATAGGTGTGGGGAGCAGAGAAGGCTGAGGAA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCCAAAGAAATaGTCCCACCAAGACCATGGA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSTSPKK*SHQDHG
Trigger: TCCATGGTCTTGGTGGGAGCATTTCTTTGGAGAGGT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCAAAAGCAAAGATACTaGGAGGGAAGATGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVQKQRY*EGRWRW
Trigger: CCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTGCAGAGTGGGAGAATaGGTAGAGGAAGCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVCRVGE*VEEAGF
Trigger: GAAACCTGCTTCCTCTACCCATTCTCCCACTCTGCA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDSPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCTTTCCTTTGCTCCTTaGTTAACAGGGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLSFAP*LTGSVC
Trigger: GCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTTTCCTTTGCTCCTTaGTTAACAGGGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLSFAP*LTGSVC
Trigger: GCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAATGAAACCCCTGAGGTaGAAAAAGATAAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGMKPLR*KKIKTS
Trigger: GCTTGTCTTTATCTTTTTCCACCTCAGGGGTTTCAT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACTCAGGCACTGGTGTTaGGGCCCTATTCATCCTCAT +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLRHWC*GPIHPH
Trigger: ATGAGGATGAATAGGGCCCCAACACCAGTGCCTGAG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTTCATTCTCTCTCCCTaGGATGGCTGTAAAAGCCTC +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSFILSP*DGCKSL
Trigger: GAGGCTTTTACAGCCATCCCAGGGAGAGAGAATGAA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTTTCTGCCGAAATGCTaGGGTGAAACCCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSFLPKC*GETLKW
Trigger: CCATTTTAGGGTTTCACCTCAGCATTTCGGCAGAAA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCC +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSNFALE*IPGVMS
Trigger: GGACATAACTCCTGGAATTCACTCCAGTGCAAAGTT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCTTACCACTTGGAAGTaGCTGGCAGGTAGTAATTGC +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLTTWK*LAGSNC
Trigger: GCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAGTTGTCATGTTTCTTaGCCTTTGCTGTCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSCHVS*PLLSPL
Trigger: CAGAGGAGACAGCAAAGGTCAAGAAACATGACAACT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAGTTGTCATGTTTCTTaGCCTTTGCTGTCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSCHVS*PLLSPL
Trigger: CAGAGGAGACAGCAAAGGTCAAGAAACATGACAACT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLSLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 2 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGESNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAAATATACTTTCCTTTaGTCCTTGGTTAACAGGGTC +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGKYTFL*SLVNRV
Trigger: GACCCTGTTAACCAAGGAGCAAAGGAAAGTATATTT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAACCAGTCTCCACACTaGAACCATAGTGATCTAAGG +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSNQSPH*NHSDLR
Trigger: CCTTAGATCACTATGGTTGCAGTGTGGAGACTGGTT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAACCAGTCTCCACACTaGAACCATAGTGATCTAAGG +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSNQSPH*NHSDLR
Trigger: CCTTAGATCACTATGGTTGCAGTGTGGAGACTGGTT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATGCAGAGTGGGAGAATaGGTAGAGGAAGCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQCRVGE*VEEAGF
Trigger: GAAACCTGCTTCCTCTACCCATTCTCCCACTCTGCA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGCTCAAATCGGAGAATaGCACAAACTCCAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSAQIGE*HKLQKG
Trigger: TCCCTTTTGGAGTTTGTGCCATTCTCCGATTTGAGC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGCTCAAATCGGAGAATaGCACAAACTCCAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSAQIGE*HKLQKG
Trigger: TCCCTTTTGGAGTTTGTGCCATTCTCCGATTTGAGC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLLNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAGAGTCAGCAAGTCATaGAAGAGGTTTTACAGTCTA +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDRVSKS*KRFYSL
Trigger: TAGACTGTAAAACCTCTTCCATGACTTGCTGACTCT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAATGAAATTCCAGCATaGATGAGAGAAGCCCTGATT +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDNEIPA*MREALI
Trigger: AATCAGGGCTTCTCTCATCCATGCTGGAATTTCATT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCCACTTGGAAGTGACTaGCAGGTAGTAATTGCTCAA +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSPLGSD*QVVIAQ
Trigger: TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTTTCTGCCGAAATGCTaGGGTGAAACCCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVFLPKC*GETLKW
Trigger: CCATTTTAGGGTTTCACCTCAGCATTTCGGCAGAAA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATT +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDKPKVP*LTRELI
Trigger: AATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATAGCGGAGAAGTCCCCTaGGCATCTCTGAACATCATG +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDSGEVP*ASLNIM
Trigger: CATGATGTTCAGAGATGCTCAGGGGACTTCTCCGCT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAAGTTGACATCTAAATaGAATTCCAGCATGGATGAG +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDKLTSK*NSSMDE
Trigger: CTCATCCATGCTGGAATTTCATTTAGATGTCAACTT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAAAGGGCCAGATAATTaGACTATCCTGGACCACACA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVKGPDN*TILDHT
Trigger: TGTGTGGTCCAGGATAGTTCAATTATCTGGCCCTTT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACAGTTCTTTTCCTGTTaGTATTATCCTATAGAGTCA +
Preference number: 2 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGQFFSC*YYPIES
Trigger: TGACTCTATAGGATAATAGCAACAGGAAAAGAACTG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 2 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGCTCAAATCGGAGAATaGCACAAACTCCAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVAQIGE*HKLQKG
Trigger: TCCCTTTTGGAGTTTGTGCCATTCTCCGATTTGAGC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACTTTCCTTTGCTCCTTaGTTAACAGGGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLSFAP*LTGSVC
Trigger: GCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCATAATTGAACTATCCTaGACCACACACAGCTACCCT +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSIIELS*TTHSYP
Trigger: AGGGTAGCTGTGTGTGGTCCAGGATAGTTCAATTAT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCACTTGGAAGTGACTaGCAGGTAGTAATTGCTCAA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPLGSD*QVVIAQ
Trigger: TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGCCGAAATGCTGAGGTaGAACCCTAAAATGGTTCTG +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFAEMLR*NPKMVL
Trigger: CAGAACCATTTTAGGGTTTCACCTCAGCATTTCGGC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCC +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQNFALE*IPGVMS
Trigger: GGACATAACTCCTGGAATTCACTCCAGTGCAAAGTT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAAAGGGCCAGATAATTaGACTATCCTGGACCACACA +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQKGPDN*TILDHT
Trigger: TGTGTGGTCCAGGATAGTTCAATTATCTGGCCCTTT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGTCAATTCTATCTCCTaGGCAACCCATAAAACGATT +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSVNSIS*ATHKTI
Trigger: AATCGTTTTATGGGTTGCTCAGGAGATAGAATTGAC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDVLFKL*TGVNSR
Trigger: CCTGGAATTCACTCCAGTGCAAAGTTTAAATAATAC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCATTCCTACCCTCTATTaGTTGAGAGTAGGATATTGC +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSIPTLY*LRVGYC
Trigger: GCAATATCCTACTCTCAAGCAATAGAGGGTAGGAAT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDSPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTGCAGAGTGGGAGAATaGGTAGAGGAAGCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDCRVGE*VEEAGF
Trigger: GAAACCTGCTTCCTCTACCCATTCTCCCACTCTGCA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCTTTCCTTTGCTCCTTaGTTAACAGGGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFLSFAP*LTGSVC
Trigger: GCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAGAGTCAGCAAGTCATaGAAGAGGTTTTACAGTCTA +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSRVSKS*KRFYSL
Trigger: TAGACTGTAAAACCTCTTCCATGACTTGCTGACTCT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAATGAAATTCCAGCATaGATGAGAGAAGCCCTGATT +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSNEIPA*MREALI
Trigger: AATCAGGGCTTCTCTCATCCATGCTGGAATTTCATT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCATAATTGAACTATCCTaGACCACACACAGCTACCCT +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVIIELS*TTHSYP
Trigger: AGGGTAGCTGTGTGTGGTCCAGGATAGTTCAATTAT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTGCCTTATTCAATTTTaGTTATTGTCCCAGAACTCA +
Preference number: 2 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDCLIQF*LLSQNS
Trigger: TGAGTTCTGGGACAATAACCAAAATTGAATAAGGCA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCC +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFNFALE*IPGVMS
Trigger: GGACATAACTCCTGGAATTCACTCCAGTGCAAAGTT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAAGTTGACATCTAAATaGAATTCCAGCATGGATGAG +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSKLTSK*NSSMDE
Trigger: CTCATCCATGCTGGAATTTCATTTAGATGTCAACTT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCAACAAATGTTCTATaGGTGAATGAATCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSTNVL*VNESLG
Trigger: TCCCAAGGATTCATTCACTCATAGAACATTTGTTGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTTCTCCAATAAATTGTaGGTGCCACAAAGAACCATT +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSFSNKL*VPQRTI
Trigger: AATGGTTCTTTGTGGCACTCACAATTTATTGGAGAA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000428189.5
3UTR-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFLNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCATGAAACCCCTGAGGTaGAAAAAGATAAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVMKPLR*KKIKTS
Trigger: GCTTGTCTTTATCTTTTTCCACCTCAGGGGTTTCAT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGAGTCAGCAAGTCATaGAAGAGGTTTTACAGTCTA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVRVSKS*KRFYSL
Trigger: TAGACTGTAAAACCTCTTCCATGACTTGCTGACTCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAATAATTGAACTATCCTaGACCACACACAGCTACCCT +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQIIELS*TTHSYP
Trigger: AGGGTAGCTGTGTGTGGTCCAGGATAGTTCAATTAT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAAGTTGACATCTAAATaGAATTCCAGCATGGATGAG +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVKLTSK*NSSMDE
Trigger: CTCATCCATGCTGGAATTTCATTTAGATGTCAACTT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTTCTCCAATAAATTGTaGGTGCCACAAAGAACCATT +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVFSNKL*VPQRTI
Trigger: AATGGTTCTTTGTGGCACTCACAATTTATTGGAGAA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000428189.5
3UTR-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDSLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGAGAGAGCTGATTTCTaGCGAAATGCTGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDERADF*RNAEVK
Trigger: TTTCACCTCAGCATTTCGGCAGAAATCAGCTCTCTC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 2 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAAATATACTTTCCTTTaGTCCTTGGTTAACAGGGTC +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVKYTFL*SLVNRV
Trigger: GACCCTGTTAACCAAGGAGCAAAGGAAAGTATATTT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDLNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDSPRPP*SSIHIV
Trigger: TACTATGTGAATACTTGACCATGGAGGTCTGGGGCT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGCCTTATTCAATTTTaGTTATTGTCCCAGAACTCA +
Preference number: 2 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSCLIQF*LLSQNS
Trigger: TGAGTTCTGGGACAATAACCAAAATTGAATAAGGCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVVLFKL*TGVNSR
Trigger: CCTGGAATTCACTCCAGTGCAAAGTTTAAATAATAC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCAGTTCTTTTCCTGTTaGTATTATCCTATAGAGTCA +
Preference number: 2 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVQFFSC*YYPIES
Trigger: TGACTCTATAGGATAATAGCAACAGGAAAAGAACTG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFLKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACAGTTCTTTTCCTGTTaGTATTATCCTATAGAGTCA +
Preference number: 2 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQQFFSC*YYPIES
Trigger: TGACTCTATAGGATAATAGCAACAGGAAAAGAACTG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATATGAAACCCCTGAGGTaGAAAAAGATAAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDMKPLR*KKIKTS
Trigger: GCTTGTCTTTATCTTTTTCCACCTCAGGGGTTTCAT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 90 bp TCCTACCCTCTATTGCTTGAGAGTAGGATATTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTCAGGGATATATGTCTGGCATATATT +
Preference number: 2 (lower is better)
Translates to: SYPLLLESRILPYSI*VIVPELRDICLAYI
Trigger: AATATATGCCAGACATATATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDLKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFVLFKL*TGVNSR
Trigger: CCTGGAATTCACTCCAGTGCAAAGTTTAAATAATAC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDSNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: ESRILPYSILVIVPELRDVLFKL*TGVNSR
Trigger: CCTGGAATTCACTCCAGTGCAAAGTTTAAATAATAC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 72 bp GCGCTGTTCCCTCCTGTGACAGAAGCCACCGGCGCCTaGCTGAGGGCACTCCCCTCACTGGGACTCTCAGTA +
Preference number: 3 (lower is better)
Translates to: ALFPPVTEATGA*LRALPSLGLSV
Trigger: TACTGAGAGTCCCAGTGAGGGGAGTGCCCTCAGGCAGGCGCCGGTGGCTTCTGTCACAGGAGGGAACAGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 3 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 72 bp TGCTTCAAGATGAAGGCGCAAAGCAGCCTCTCAGCCTaGAGTGATGCTACGACACCGGCAGATGGCGCTGCA +
Preference number: 3 (lower is better)
Translates to: CFKMKAQSSLSA*SDATTPADGAA
Trigger: TGCAGCGCCATCTGCCGGTGTCGTAGCATCACTGCAGGCTGAGAGGCTGCTTTGCGCCTTCATCTTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTGCACTGGATCATCTTaGTTCCACCCCCAAACCAGA +
Preference number: 3 (lower is better)
Translates to: DKRVRISAWRGDWALGFLCTGSS*FHPQTR
Trigger: TCTGGTTTGGGGGTGGAACAAAGATGATCCAGTGCA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 3 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCCCCACACCTATATGTaGATGATGCCCAAATCTCTG +
Preference number: 3 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPPHTYM*MMPKSL
Trigger: CAGAGATTTGGGCATCATCAACATATAGGTGTGGGG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 72 bp ACATCTGGGGCTTCTGATTCCACCTCTCCAAAGAAATaGTCCCACCAAGACCATGGAGGCCCCTCTCGTTGC +
Preference number: 3 (lower is better)
Translates to: TSGASDSTSPKK*SHQDHGGPSRC
Trigger: GCAACGAGAGGGGCCTCCATGGTCTTGGTGGGAGCATTTCTTTGGAGAGGTGGAATCAGAAGCCCCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 72 bp GCCCTGATTTCTCTCCATCAAGAGACTAGCCAGCTATaGAAGCCACCAGAGCCCCAGACCTCCATGGTCAAG +
Preference number: 3 (lower is better)
Translates to: ALISLHQETSQL*KPPEPQTSMVK
Trigger: CTTGACCATGGAGGTCTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTCTTGATGGAGAGAAATCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 3 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR TCA 72 bp TCAGCATGGACATCTGTTCCTCTAGGACGCTTCCCCTaGTTCACCAAGACCAGCTTAACTGCCCCTACTGGC +
Preference number: 3 (lower is better)
Translates to: SAWTSVPLGRFP*FTKTSLTAPTG
Trigger: GCCAGTAGGGGCAGTTAAGCTGGTCTTGGTGAATCAGGGGAAGCGTCCTAGAGGAACAGATGTCCATGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 72 bp CTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATaGAGCCACCACTACCCCACAGGATCCTGTACCACC +
Preference number: 3 (lower is better)
Translates to: LLPDQYPNVPPI*SHHYPTGSCTT
Trigger: GGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 3 (lower is better)
Translates to: DKRVRISAWRGDWALGFLYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 3 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 3 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQTFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 72 bp CCACCCCCAAACCAGAGTAAATGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTATGTACCTCAAATACTC +
Preference number: 3 (lower is better)
Translates to: PPPNQSKWNSGG*FCARPYVPQIL
Trigger: GAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGGGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 72 bp GCCAGCTATGGAAGCCACCAGAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTAGACATGACCCAGACA +
Preference number: 3 (lower is better)
Translates to: ASYGSHQSPRPP*SSIHIVDMTQT
Trigger: TGTCTGGGTCATGTCTACTATGTGAATACTTGACCATGGAGGTCTGGGGCTCTGGTGGCTTCCATAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 3 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 3 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: PVPHSFLISIPMSLLYGATFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 3 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 3 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 3 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATGCACTGGATCATCTTaGTTCCACCCCCAAACCAGA +
Preference number: 3 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGCTGSS*FHPQTR
Trigger: TCTGGTTTGGGGGTGGAACAAAGATGATCCAGTGCA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 3 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 3 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGTFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 3 (lower is better)
Translates to: DKRVRISAWRGDWALGFLSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 72 bp AGGTCAGGCTCTGGTGGTACATCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACACACAATAGACCCTCA +
Preference number: 3 (lower is better)
Translates to: RSGSGGTSLYAW*SAQVKTHNRPS
Trigger: TGAGGGTCTATTGTGTGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGATGTACCACCAGAGCCTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGTCCAACTACACTTTTaGCTATCATCCAATACAGAC +
Preference number: 3 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAVQLHF*LSSNTD
Trigger: GTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGAC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDTFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: PVPHSFLISIPMSLLYGADLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 3 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTATTCCTACCCTCTATaGCTTGAGAGTAGGATATTG +
Preference number: 3 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNYSYPL*LESRIL
Trigger: CAATATCCTACTCTCAAGCAATAGAGGGTAGGAATA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTATTCCTACCCTCTATaGCTTGAGAGTAGGATATTG +
Preference number: 3 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAYSYPL*LESRIL
Trigger: CAATATCCTACTCTCAAGCAATAGAGGGTAGGAATA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR TCA 72 bp TATGGCTGTAGACAACTGTCTCAGGAAACAGACCCATaGCCCACCCAGTTGCCAAGTCAGAAACAGGATGTA +
Preference number: 3 (lower is better)
Translates to: YGCRQLSQETDP*PTQLPSQKQDV
Trigger: TACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTGTTTCCTGAGACAGTTGTCTACAGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 72 bp GTTAGCCTGGAACAGCCGCTCTCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCAAACAATCTTTATTCA +
Preference number: 3 (lower is better)
Translates to: VSLEQPLSPQFI*GRGYKANNLYS
Trigger: TGAATAAAGATTGTTTGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGAGAGCGGCTGTTCCAGGCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 3 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGCACTGGATCATCTTaGTTCCACCCCCAAACCAGA +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSCTGSS*FHPQTR
Trigger: TCTGGTTTGGGGGTGGAACAAAGATGATCCAGTGCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 3 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 3 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTC +
Preference number: 3 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALPYSI*VIVPEL
Trigger: GAGTTCTGGGACAATAACCAAAATTGAATAAGGCAA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAAGTTGTCATGTTTCTaGACCTTTGCTGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDKLSCF*TFAVSS
Trigger: AGAGGAGACAGCAAAGGTCAAGAAACATGACAACTT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCCCCACACCTATATGTaGATGATGCCCAAATCTCTG +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSPHTYM*MMPKSL
Trigger: CAGAGATTTGGGCATCATCAACATATAGGTGTGGGG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR TCA 72 bp TTAACAAAGGGATATACAGCAAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATTTCTGCCGAAATGCTG +
Preference number: 3 (lower is better)
Translates to: LTKGYTAKPKVP*LTRELISAEML
Trigger: CAGCATTTCGGCAGAAATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTGTATATCCCTTTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 72 bp AACTGTCTCAGGAAACAGACCCATGACCCACCCAGTTaGCAAGTCAGAAACAGGATGTATACTCTTGACTTG +
Preference number: 3 (lower is better)
Translates to: NCLRKQTHDPPS*QVRNRMYTLDL
Trigger: CAAGTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTGTTTCCTGAGACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATGCACTGGATCATCTTaGTTCCACCCCCAAACCAGA +
Preference number: 3 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQCTGSS*FHPQTR
Trigger: TCTGGTTTGGGGGTGGAACAAAGATGATCCAGTGCA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTATTCCTACCCTCTATaGCTTGAGAGTAGGATATTG +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDYSYPL*LESRIL
Trigger: CAATATCCTACTCTCAAGCAATAGAGGGTAGGAATA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACAGGATGTATACTCTaGACTTGTCTCTCTCCCCTA +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSTGCIL*TCLSPL
Trigger: TAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTTCCCCAAGCTCCATTaGCATAAACTGTCTCTGATG +
Preference number: 3 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSFPKLH*HKLSLM
Trigger: CATCAGAGACAGTTTATGCAAATGGAGCTTGGGGAA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTTCCCCAAGCTCCATTaGCATAAACTGTCTCTGATG +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSFPKLH*HKLSLM
Trigger: CATCAGAGACAGTTTATGCAAATGGAGCTTGGGGAA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR TCA 72 bp ACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTaGCTTGTCTCTCTCCCCTACACAGCAAAACAATCC +
Preference number: 3 (lower is better)
Translates to: TQLPSQKQDVYS*LVSLPYTAKQS
Trigger: GGATTGTTTTGCTGTGTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 72 bp AAAGTTGTCATGTTTCTTGACCTTTGCTGTCTCCTCTaGCCAGAATGCAATTTCCCTGTCTGGCTAACTCCT +
Preference number: 3 (lower is better)
Translates to: KVVMFLDLCCLL*PECNFPVWLTP
Trigger: AGGAGTTAGCCAGACAGGGAAATTGCATTCTGGGCAGAGGAGACAGCAAAGGTCAAGAAACATGACAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 3 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTGCACTGGATCATCTTaGTTCCACCCCCAAACCAGA +
Preference number: 3 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFCTGSS*FHPQTR
Trigger: TCTGGTTTGGGGGTGGAACAAAGATGATCCAGTGCA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTC +
Preference number: 3 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLPYSI*VIVPEL
Trigger: GAGTTCTGGGACAATAACCAAAATTGAATAAGGCAA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 3 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAAGTTGTCATGTTTCTaGACCTTTGCTGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSKLSCF*TFAVSS
Trigger: AGAGGAGACAGCAAAGGTCAAGAAACATGACAACTT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAAGTTGTCATGTTTCTaGACCTTTGCTGTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSKLSCF*TFAVSS
Trigger: AGAGGAGACAGCAAAGGTCAAGAAACATGACAACTT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR TCA 72 bp CTTTACGCTTTTCCTCCAAATTATTCCTTAACCCTCTaGCATCTGGGGCTTCTGATTCCACCTCTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: LYAFPPNYSLTL*HLGLLIPPLQR
Trigger: TCTTTGGAGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 3 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGTCCAACTACACTTTTaGCTATCATCCAATACAGAC +
Preference number: 3 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSVQLHF*LSSNTD
Trigger: GTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGAC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGTCCAACTACACTTTTaGCTATCATCCAATACAGAC +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSVQLHF*LSSNTD
Trigger: GTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGAC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 3 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFTFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 3 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFLRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTC +
Preference number: 3 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLPYSI*VIVPEL
Trigger: GAGTTCTGGGACAATAACCAAAATTGAATAAGGCAA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTC +
Preference number: 3 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLPYSI*VIVPEL
Trigger: GAGTTCTGGGACAATAACCAAAATTGAATAAGGCAA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTACAGTCTTCCAAAGTaGTCATGTTTCTTGACCTTT +
Preference number: 3 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSYSLPK*SCFLTF
Trigger: AAAGGTCAAGAAACATGACAACTTTGGAAGACTGTA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 3 (lower is better)
Translates to: ESRILPYSILVIVPELRDYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGTCCAACTACACTTTTaGCTATCATCCAATACAGAC +
Preference number: 3 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQVQLHF*LSSNTD
Trigger: GTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGAC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 3 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATATTCCTACCCTCTATaGCTTGAGAGTAGGATATTG +
Preference number: 3 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQYSYPL*LESRIL
Trigger: CAATATCCTACTCTCAAGCAATAGAGGGTAGGAATA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR TCA 72 bp TTCTCATGCTGGTATTATTTAAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCCACACTGAGACCAATG +
Preference number: 3 (lower is better)
Translates to: FSCWYYLNFALE*IPGVMSTLRPM
Trigger: CATTGGTCTCAGTGTGGACATAACTCCTGGAATTCACTCCAGTGCAAAGTTTAAATAATACCAGCATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 72 bp AGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTaGGAAACCTTCAAGTACATTCTCATGCTGGTATTA +
Preference number: 3 (lower is better)
Translates to: SWDLFSFLSSTF*ETFKYILMLVL
Trigger: TAATACCAGCATGAGAATGTACTTGAAGGTTTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CCA 72 bp GAACCATTTCTATCTCACTTACCACTTGGAAGTGACTaGCAGGTAGTAATTGCTCAACAAATGTTCTATGAG +
Preference number: 3 (lower is better)
Translates to: EPFLSHLPLGSD*QVVIAQQMFYE
Trigger: CTCATAGAACATTTGTTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR TCA 72 bp AGCAAAACAATCCCAAGACATGTCAATTCTATCTCCTaGGCAACCCATAAAACGATTTCTCTTCTTTCCATC +
Preference number: 3 (lower is better)
Translates to: SKTIPRHVNSIS*ATHKTISLLSI
Trigger: GATGGAAAGAAGAGAAATCGTTTTATGGGTTGCTCAGGAGATAGAATTGACATGTCTTGGGATTGTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 72 bp AAAAATTTGTATCAACATGAAGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTGGAGAACATCATTCAC +
Preference number: 3 (lower is better)
Translates to: KNLYQHEVLELY*MSPQDLENIIH
Trigger: GTGAATGATGTTCTCCAAATCCTGGGGGCTCATGCAGTATAATTCTAGGACTTCATGTTGATACAAATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR GCA 72 bp TCTATTCCTACCCTCTATTGCTTGAGAGTAGGATATTaGCTTATTCAATTTTGGTTATTGTCCCAGAACTCA +
Preference number: 3 (lower is better)
Translates to: SIPTLYCLRVGY*LIQFWLLSQNS
Trigger: TGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGGAATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR TCA 72 bp TGGCAGGTAGTAATTGCTCAACAAATGTTCTATGAGTaGATGAATCCTTGGGATAATTATAGTACTAACCAT +
Preference number: 3 (lower is better)
Translates to: WQVVIAQQMFYE*MNPWDNYSTNH
Trigger: ATGGTTAGTACTATAATTATCCCAAGGATTCATTCACTCATAGAACATTTGTTGAGCAATTACTACCTGCCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGGGAGGGCGGCGGTCTaGGAGTCCTGGGTGCCGACC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLGRAAV*ESWVPT
Trigger: GGTCGGCACCCAGGACTCTCAGACCGCCGCCCTCCC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGGAGGGCGGCGGTCTaGGAGTCCTGGGTGCCGACC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGRAAV*ESWVPT
Trigger: GGTCGGCACCCAGGACTCTCAGACCGCCGCCCTCCC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGCACGTGAGAGCCAGTaGCACCGAGAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLARESQ*HREGAP
Trigger: CGGGGCGCCCTCTCGGTGCCACTGGCTCTCACGTGC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCCCGGACCAGTCACCTaGCCCGCCCTCCGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQPGPVT*PALRRA
Trigger: AGCTCGGCGGAGGGCGGGCCAGGTGACTGGTCCGGG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTCTGGGTGGCGCAGGTaGAGCAGGGCCTGCACGGGA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSGWRR*SRACTG
Trigger: TCCCGTGCAGGCCCTGCTCCACCTGCGCCACCCAGA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCCAGGGGTGTTCCGCTaGGGGGTCCTCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLPGVFR*GVLSLW
Trigger: CCAGAGGCTGAGGACCCCTCAGCGGAACACCCCTGG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCCACCGGCGCCTGCCTaGGGGCACTCCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAPPAPA*GHSPHW
Trigger: CCAGTGAGGGGAGTGCCCTCAGGCAGGCGCCGGTGG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCAGGCTCTCAGCAACTaGTCTGGCCCCAGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPQALSN*SGPRAR
Trigger: TCGGGCCCTGGGGCCAGAGCAGTTGCTGAGAGCCTG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAGGTGGAGCAGGGCCTaGACGGGAATTCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPRWSRA*TGIREA
Trigger: GGCCTCCCGAATTCCCGTGCAGGCCCTGCTCCACCT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGGCCCCACCCTGCCCTaGAAAACCACCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPGPTLP*KTTSSV
Trigger: CACGGAGCTGGTGGTTTTGCAGGGCAGGGTGGGGCC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGGTTGCCGCCATGCCTaGCAGAGACGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPGCRHA*QRRREA
Trigger: TGCCTCCCTCCGTCTCTGCCAGGCATGGCGGCAACC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAACCTACCACTCACCTaGAGGGGGCGGCGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPNLPLT*RGRRSG
Trigger: TCCGCTCCGCCGCCCCCTCCAGGTGAGTGGTAGGTT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGGAAGGAGGCGCGCGTaGGAGGACCAGGCTAACTCC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPGRRRA*EDQANS
Trigger: GGAGTTAGCCTGGTCCTCCCACGCGCGCCTCCTTCC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCCCGGACCAGTCACCTaGCCCGCCCTCCGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAPGPVT*PALRRA
Trigger: AGCTCGGCGGAGGGCGGGCCAGGTGACTGGTCCGGG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGGAGGGCGGCGGTCTaGGAGTCCTGGGTGCCGACC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEGRAAV*ESWVPT
Trigger: GGTCGGCACCCAGGACTCTCAGACCGCCGCCCTCCC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCTGCGTCCAGGTTGCTaGACTACACCGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLLRPGC*TTPGAR
Trigger: CCGTGCCCCCGGTGTAGTCCAGCAACCTGGACGCAG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGAACCTACCACTCACCTaGAGGGGGCGGCGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLNLPLT*RGRRSG
Trigger: TCCGCTCCGCCGCCCCCTCCAGGTGAGTGGTAGGTT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGCACGTGAGAGCCAGTaGCACCGAGAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNARESQ*HREGAP
Trigger: CGGGGCGCCCTCTCGGTGCCACTGGCTCTCACGTGC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGCTTCTTCCTCGGCATaGCCCGGACCAGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPASSSA*PGPVTW
Trigger: CCAGGTGACTGGTCCGGGCCATGCCGAGGAAGAAGC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSRCGC*NWSAAH
Trigger: ATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGGGTCCTCAGCCTCTaGGTGGCGCAGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGVLSL*VAQVEQ
Trigger: CTGCTCCACCTGCGCCACCCAGAGGCTGAGGACCCC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCAGCTCCGTGGTCTCTaGATGGGACTCCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPQLRGL*MGLPGA
Trigger: GGCACCTGGGAGTCCCATCCAGAGACCACGGAGCTG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGAGCCAGGCTGGACCCTaGAGCCGAGGTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLSQAGP*SRGWGL
Trigger: GAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAGCAAAGGGAAGGTGTaGGGTTGCCGCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSKGKV*GCRHAW
Trigger: CCAGGCATGGCGGCAACCTCACACCTTCCCTTTGCT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCCAGGGGTGTTCCGCTaGGGGGTCCTCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNPGVFR*GVLSLW
Trigger: CCAGAGGCTGAGGACCCCTCAGCGGAACACCCCTGG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGATGAAAACACAGGCTaGGGCGGCCGTCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPDENTG*GGRPLP
Trigger: TGGCAGTGGACGGCCGCCTCAGCCTGTGTTTTCATC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAGACTGCGTCCAGGTTaGTGGACTACACCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPRLRPG*WTTPGA
Trigger: TGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGCTCCCGGCTCCCGCTaGGGCTGTTGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAAPGSR*GCWNWS
Trigger: GCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCAGGCTCTCAGCAACTaGTCTGGCCCCAGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQQALSN*SGPRAR
Trigger: TCGGGCCCTGGGGCCAGAGCAGTTGCTGAGAGCCTG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCTGCTCCACCAGGACTaGTGGGCCATCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPLLHQD*WAILLF
Trigger: GAAGAGGAGGATGGCCCAGCAGTCCTGGTGGAGCAG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGGTGGAGCAGGGCCTaGACGGGAATTCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQRWSRA*TGIREA
Trigger: GGCCTCCCGAATTCCCGTGCAGGCCCTGCTCCACCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGCCCCACCCTGCCCTaGAAAACCACCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGPTLP*KTTSSV
Trigger: CACGGAGCTGGTGGTTTTGCAGGGCAGGGTGGGGCC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTCCTCCTCGTCACCTaGTGGCCCCACCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLLLVT*WPHPAL
Trigger: CAGGGCAGGGTGGGGCCAGCAGGTGACGAGGAGGAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTCCTCCTCGTCACCTaGTGGCCCCACCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALLLVT*WPHPAL
Trigger: CAGGGCAGGGTGGGGCCAGCAGGTGACGAGGAGGAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGTTGCCGCCATGCCTaGCAGAGACGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGCRHA*QRRREA
Trigger: TGCCTCCCTCCGTCTCTGCCAGGCATGGCGGCAACC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTACCACTCACCTaGAGGGGGCGGCGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQNLPLT*RGRRSG
Trigger: TCCGCTCCGCCGCCCCCTCCAGGTGAGTGGTAGGTT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGAAGGAGGCGCGCGTaGGAGGACCAGGCTAACTCC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGRRRA*EDQANS
Trigger: GGAGTTAGCCTGGTCCTCCCACGCGCGCCTCCTTCC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCCCGGACCAGTCACCTaGCCCGCCCTCCGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFPGPVT*PALRRA
Trigger: AGCTCGGCGGAGGGCGGGCCAGGTGACTGGTCCGGG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCTGGGTGGCGCAGGTaGAGCAGGGCCTGCACGGGA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASGWRR*SRACTG
Trigger: TCCCGTGCAGGCCCTGCTCCACCTGCGCCACCCAGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTCTGGGTGGCGCAGGTaGAGCAGGGCCTGCACGGGA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSGWRR*SRACTG
Trigger: TCCCGTGCAGGCCCTGCTCCACCTGCGCCACCCAGA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGCCAGGCTGGACCCTaGAGCCGAGGTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSQAGP*SRGWGL
Trigger: GAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGGGCACTCCCCTCACTaGGACTCTCAGTACCACGCC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLGHSPH*DSQYHA
Trigger: GGCGTGGTACTGAGAGTCCCAGTGAGGGGAGTGCCC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTGGGCTACTGGCACGTaGGAGCCAGTGGCACCGAGA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQWATGT*EPVAPR
Trigger: TCTCGGTGCCACTGGCTCTCACGTGCCAGTAGCCCA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGATGAAAACACAGGCTaGGGCGGCCGTCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLDENTG*GGRPLP
Trigger: TGGCAGTGGACGGCCGCCTCAGCCTGTGTTTTCATC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCACCGGCGCCTGCCTaGGGGCACTCCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPPAPA*GHSPHW
Trigger: CCAGTGAGGGGAGTGCCCTCAGGCAGGCGCCGGTGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCGCTGTTCCCTCCTGTaGCAGAAGCCACCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNRCSLL*QKPPAP
Trigger: AGGCGCCGGTGGCTTCTGTCACAGGAGGGAACAGCG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGCTCCCGGCTCCCGCTaGGGCTGTTGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEAPGSR*GCWNWS
Trigger: GCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCTGCTCCACCAGGACTaGTGGGCCATCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLLLHQD*WAILLF
Trigger: GAAGAGGAGGATGGCCCAGCAGTCCTGGTGGAGCAG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAGGTGGAGCAGGGCCTaGACGGGAATTCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNRWSRA*TGIREA
Trigger: GGCCTCCCGAATTCCCGTGCAGGCCCTGCTCCACCT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGAGGCGGCCGTCCACTaGCAGCCGCAAGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQEAAVH*QPQETV
Trigger: AACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTGCTGGCCCCACCCTaGCCTGCAAAACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLLAPP*PAKPPA
Trigger: AGCTGGTGGTTTTGCAGGGCAGGGTGGGGCCAGCAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPRRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGGGGGTGTCAGGAGTTaGCTCCTGCCAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLGGVRS*LLPGLQ
Trigger: CTGAAGACCTGGCAGGAGGCAACTCCTGACACCCCC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTCTTCTCAGGCCCTCTaGCCCGAGAGCCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSSQAL*PESLLT
Trigger: AGTCAACAGGCTCTCGGGCCAGAGGGCCTGAGAAGA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGGAAGGAGGCGCGCGTaGGAGGACCAGGCTAACTCC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAGRRRA*EDQANS
Trigger: GGAGTTAGCCTGGTCCTCCCACGCGCGCCTCCTTCC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTGCGGGGTGGGCTACTaGCACGTGAGAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGACGVGY*HVRASG
Trigger: GCCACTGGCTCTCACGTGCCAGTAGCCCACCCCGCA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCCGGACCAGTCACCTaGCCCGCCCTCCGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPGPVT*PALRRA
Trigger: AGCTCGGCGGAGGGCGGGCCAGGTGACTGGTCCGGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGGGTCCTCAGCCTCTaGGTGGCGCAGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEGVLSL*VAQVEQ
Trigger: CTGCTCCACCTGCGCCACCCAGAGGCTGAGGACCCC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTACTGGGAGGGAAGATaGCGCTGGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPYWEGR*RWARNS
Trigger: TGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGTGCGTATTTCAGCGTaGAGGGGAGACTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPVRISA*RGDWAL
Trigger: AAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCAC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGAGGCCCAGCAAGAGCTaGACCAAGCCCACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLRPSKS*TKPTSP
Trigger: TGGAGAGGTGGGCTTGGTCCAGCTCTTGCTGGGCCT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGCAAAGGGAAGGTGTaGGGTTGCCGCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSKGKV*GCRHAW
Trigger: CCAGGCATGGCGGCAACCTCACACCTTCCCTTTGCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGAGCGCAGCCCATCTTaGAGCCCTCTCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNERSPS*SPLFRS
Trigger: GGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGCCCCACCAGCCCATTaGTCAGCGAGGACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQAPPAH*SARTFP
Trigger: TGGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGTGAGGTTGCCGCCATaGCTGGCAGAGACGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAVRLPP*LAETEG
Trigger: TCCCTCCGTCTCTGCCAGGCATGGCGGCAACCTCAC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGTGAGGTTGCCGCCATaGCTGGCAGAGACGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNVRLPP*LAETEG
Trigger: TCCCTCCGTCTCTGCCAGGCATGGCGGCAACCTCAC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGACTGCGTCCAGGTTaGTGGACTACACCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQRLRPG*WTTPGA
Trigger: TGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCTCCCGGCTCCCGCTaGGGCTGTTGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGAPGSR*GCWNWS
Trigger: GCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTGCTGGCCCCACCCTaGCCTGCAAAACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALLAPP*PAKPPA
Trigger: AGCTGGTGGTTTTGCAGGGCAGGGTGGGGCCAGCAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGACCGAGGACCGGATGTaGCGATCTTACGGTGCGACA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLTEDRM*RSYGAT
Trigger: TGTCGCACCGTAAGATCGCCACATCCGGTCCTCGGT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCGGGACAAGGACTTTTaGGGGGAGGTCAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLRDKDF*GEVKGH
Trigger: GTGCCCTTTGACCTCCCCCCAAAAGTCCTTGTCCCG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAACCTACCACTCACCTaGAGGGGGCGGCGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGENLPLT*RGRRSG
Trigger: TCCGCTCCGCCGCCCCCTCCAGGTGAGTGGTAGGTT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGCACGTGAGAGCCAGTaGCACCGAGAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDARESQ*HREGAP
Trigger: CGGGGCGCCCTCTCGGTGCCACTGGCTCTCACGTGC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTGCGGGGTGGGCTACTaGCACGTGAGAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGECGVGY*HVRASG
Trigger: GCCACTGGCTCTCACGTGCCAGTAGCCCACCCCGCA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGCTTCTTCCTCGGCATaGCCCGGACCAGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAASSSA*PGPVTW
Trigger: CCAGGTGACTGGTCCGGGCCATGCCGAGGAAGAAGC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPCGCWN*SAAHLE
Trigger: TTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASRCGC*NWSAAH
Trigger: ATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCCTAGGCAGAAGAGATaGGAAGATGAGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPPRQKR*EDEAWA
Trigger: TGCCCAGGCCTCATCTTCCCATCTCTTCTGCCTAGG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCAGCTCCGTGGTCTCTaGATGGGACTCCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNQLRGL*MGLPGA
Trigger: GGCACCTGGGAGTCCCATCCAGAGACCACGGAGCTG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGAGACTAGCCAGCTATaGAAGCCACCAGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLETSQL*KPPEPQ
Trigger: CTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGGGCACTCCCCTCACTaGGACTCTCAGTACCACGCC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAGHSPH*DSQYHA
Trigger: GGCGTGGTACTGAGAGTCCCAGTGAGGGGAGTGCCC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAGCAAAGGGAAGGTGTaGGGTTGCCGCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASKGKV*GCRHAW
Trigger: CCAGGCATGGCGGCAACCTCACACCTTCCCTTTGCT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGGAGGGCGGCGGTCTaGGAGTCCTGGGTGCCGACC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGRAAV*ESWVPT
Trigger: GGTCGGCACCCAGGACTCTCAGACCGCCGCCCTCCC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGGGGCGTGGACACGCTaGGGCTATACTACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAGAWTR*GYTTKP
Trigger: GGGCTTTGTAGTATAGCCTCAGCGTGTCCACGCCCC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAGCGAGGCGAGAGGATaGTGCGGGGTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFSEARG*CGVGYW
Trigger: CCAGTAGCCCACCCCGCATCATCCTCTCGCCTCGCT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGAACTGAGCCAGGCTaGTACACCTCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQRTEPG*YTSRMS
Trigger: GGACATCCGGGAGGTGTATCAGCCTGGCTCAGTTCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCCCGAGGAAAAGAGGTaGAAAGGACGACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLPEEKR*KGRRGA
Trigger: AGCTCCACGTCGTCCTTTTCACCTCTTTTCCTCGGG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGCCCCACCAGCCCATTaGTCAGCGAGGACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAAPPAH*SARTFP
Trigger: TGGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPKPKVP*LTRELI
Trigger: AATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCCACCGGCGCCTGCCTaGGGGCACTCCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSPPAPA*GHSPHW
Trigger: CCAGTGAGGGGAGTGCCCTCAGGCAGGCGCCGGTGG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCACCGGCGCCTGCCTaGGGGCACTCCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPPAPA*GHSPHW
Trigger: CCAGTGAGGGGAGTGCCCTCAGGCAGGCGCCGGTGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCGCTGTTCCCTCCTGTaGCAGAAGCCACCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFRCSLL*QKPPAP
Trigger: AGGCGCCGGTGGCTTCTGTCACAGGAGGGAACAGCG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACGCTGTTCCCTCCTGTaGCAGAAGCCACCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGRCSLL*QKPPAP
Trigger: AGGCGCCGGTGGCTTCTGTCACAGGAGGGAACAGCG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGTGGCGATCTTACGGTaGGACAGTCCTCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLVAILR*DSPLLR
Trigger: CCTGAGAAGAGGACTGTCGCACCGTAAGATCGCCAC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGCTCCCGGCTCCCGCTaGGGCTGTTGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDAPGSR*GCWNWS
Trigger: GCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGACCGGCTGTAGAACTTaGTCCCGGGCTGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLTGCRT*SRAALF
Trigger: AAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACAGGCTCTCAGCAACTaGTCTGGCCCCAGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGQALSN*SGPRAR
Trigger: TCGGGCCCTGGGGCCAGAGCAGTTGCTGAGAGCCTG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTCTTCTCCCGCCAGCTaGTCAAGTCCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLSSPAS*SSPLSP
Trigger: TGGGGAAAGTGGACTTGAGCAGCTGGCGGGAGAAGA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTGCTCCACCAGGACTaGTGGGCCATCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLLHQD*WAILLF
Trigger: GAAGAGGAGGATGGCCCAGCAGTCCTGGTGGAGCAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTATCCCTGCCAGAACCTaGAACTGCCTAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPIPART*NCLGRR
Trigger: TCTTCTGCCTAGGCAGTTGCAGGTTCTGGCAGGGAT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTCCTCCTCGTCACCTaGTGGCCCCACCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLLLVT*WPHPAL
Trigger: CAGGGCAGGGTGGGGCCAGCAGGTGACGAGGAGGAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCAGCAAAGCCTAAGGTaGCCTGACTCACGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLQQSLR*PDSRES
Trigger: GCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTACCGGCAGATGGCGCTaGAAAGCTTCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPTGRWR*KASQMQ
Trigger: CTGCATTTGAGAAGCTTTGCAGCGCCATCTGCCGGT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGGTTGCCGCCATGCCTaGCAGAGACGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFGCRHA*QRRREA
Trigger: TGCCTCCCTCCGTCTCTGCCAGGCATGGCGGCAACC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGTTGCCGCCATGCCTaGCAGAGACGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGCRHA*QRRREA
Trigger: TGCCTCCCTCCGTCTCTGCCAGGCATGGCGGCAACC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTGGGTGCCGACCTGTTaGGACCCAAATTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLWVPTC*DPNSLW
Trigger: CCACAAGGAATTTGGGTCCCAACAGGTCGGCACCCA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTGCGTCCAGGTTGCTaGACTACACCGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLRPGC*TTPGAR
Trigger: CCGTGCCCCCGGTGTAGTCCAGCAACCTGGACGCAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAACCTACCACTCACCTaGAGGGGGCGGCGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGNLPLT*RGRRSG
Trigger: TCCGCTCCGCCGCCCCCTCCAGGTGAGTGGTAGGTT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGGAAGGAGGCGCGCGTaGGAGGACCAGGCTAACTCC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFGRRRA*EDQANS
Trigger: GGAGTTAGCCTGGTCCTCCCACGCGCGCCTCCTTCC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTGCGGGGTGGGCTACTaGCACGTGAGAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFCGVGY*HVRASG
Trigger: GCCACTGGCTCTCACGTGCCAGTAGCCCACCCCGCA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCCGGACCAGTCACCTaGCCCGCCCTCCGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPGPVT*PALRRA
Trigger: AGCTCGGCGGAGGGCGGGCCAGGTGACTGGTCCGGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGESRCGC*NWSAAH
Trigger: ATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTGGGAAGATGAGGCCTaGGCAGTCACAGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLWEDEA*AVTELH
Trigger: GTGAAGCTCTGTGACTGCCCAGGCCTCATCTTCCCA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCCTAGGCAGAAGAGATaGGAAGATGAGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLPRQKR*EDEAWA
Trigger: TGCCCAGGCCTCATCTTCCCATCTCTTCTGCCTAGG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGGGGTCCTCAGCCTCTaGGTGGCGCAGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDGVLSL*VAQVEQ
Trigger: CTGCTCCACCTGCGCCACCCAGAGGCTGAGGACCCC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCAGCTCCGTGGTCTCTaGATGGGACTCCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEQLRGL*MGLPGA
Trigger: GGCACCTGGGAGTCCCATCCAGAGACCACGGAGCTG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAAACCACCAGCTCCGTaGTCTCTGGATGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQKPPAP*SLDGTP
Trigger: GGGAGTCCCATCCAGAGACCACGGAGCTGGTGGTTT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAGCCAGGCTGGACCCTaGAGCCGAGGTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFSQAGP*SRGWGL
Trigger: GAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTACTGGGAGGGAAGATaGCGCTGGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQYWEGR*RWARNS
Trigger: TGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTACAGTCTAACCCTGTaGGGGTGTCAGGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPYSLTL*GCQELP
Trigger: AGGCAACTCCTGACACCCCCACAGGGTTAGACTGTA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGGCACTCCCCTCACTaGGACTCTCAGTACCACGCC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEGHSPH*DSQYHA
Trigger: GGCGTGGTACTGAGAGTCCCAGTGAGGGGAGTGCCC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTACGACACCGGCAGATaGCGCTGCAAAGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPYDTGR*RCKASQ
Trigger: TTGAGAAGCTTTGCAGCGCCATCTGCCGGTGTCGTA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGCAAAGGGAAGGTGTaGGGTTGCCGCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGESKGKV*GCRHAW
Trigger: CCAGGCATGGCGGCAACCTCACACCTTCCCTTTGCT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCTCTGTGACACACTCTaGGGAGCTGGTTGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLLCDTL*GAGCGV
Trigger: AACACCACAACCAGCTCCTCAGAGTGTGTCACAGAG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGCCTGTTGACTCTGTaGCACACTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSLLTL*HTLRSW
Trigger: CCAGCTCCTCAGAGTGTGTCACAGAGTCAACAGGCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGAGCGCAGCCCATCTTaGAGCCCTCTCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFERSPS*SPLFRS
Trigger: GGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGCGCAGCCCATCTTaGAGCCCTCTCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGERSPS*SPLFRS
Trigger: GGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTTAAGCCTGCGGATATaGTGGGTCACAGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLSLRI*WVTDSP
Trigger: CGGGGAGTCTGTGACCCATCATATCCGCAGGCTTAA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCCCGAGGAAAAGAGGTaGAAAGGACGACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQPEEKR*KGRRGA
Trigger: AGCTCCACGTCGTCCTTTTCACCTCTTTTCCTCGGG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGATGAAAACACAGGCTaGGGCGGCCGTCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEDENTG*GGRPLP
Trigger: TGGCAGTGGACGGCCGCCTCAGCCTGTGTTTTCATC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLKPKVP*LTRELI
Trigger: AATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCAGAGTGCTTCAAGATaGAGGCGCAAAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLQSASR*RRKAAS
Trigger: AGAGGCTGCTTTGCGCCTTCATCTTGAAGCACTCTG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCTGAGAGTCCTGGGTaGCGACCTGTTGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASESPG*RPVGTQ
Trigger: TTGGGTCCCAACAGGTCGGCACCCAGGACTCTCAGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGACTGCGTCCAGGTTaGTGGACTACACCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGERLRPG*WTTPGA
Trigger: TGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCGCTCCCGTTTGTCCTaGAACTGCTTCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLRSRLS*NCFFFC
Trigger: GCAGAAGAAGAAGCAGTTGCAGGACAAACGGGAGCG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGACCGGCTGTAGAACTTaGTCCCGGGCTGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQTGCRT*SRAALF
Trigger: AAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACACCCGCCACAGCTaGCTCCATGTCTCCAGATTG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQNTRHS*LHVSRL
Trigger: CAATCTGGAGACATGGAGGCAGCTGTGGCGGGTGTT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTCTTCTCCCGCCAGCTaGTCAAGTCCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSSPAS*SSPLSP
Trigger: TGGGGAAAGTGGACTTGAGCAGCTGGCGGGAGAAGA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTATTGCTGAATCAGTCTaGTGCTCCACCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPIAESV*CSTRTA
Trigger: AGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAAT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGGCGGCCGTCCACTaGCAGCCGCAAGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGEAAVH*QPQETV
Trigger: AACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGAGGCGGCCGTCCACTaGCAGCCGCAAGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFEAAVH*QPQETV
Trigger: AACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCCTCCTCACAGGAGCTaGTCAGCTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQPPHRS*SALPLP
Trigger: AGGAAGAGGAAGAGCTGAGCAGCTCCTGTGAGGAGG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCAGCAAAGCCTAAGGTaGCCTGACTCACGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQQQSLR*PDSRES
Trigger: GCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGACCGGCAGATGGCGCTaGAAAGCTTCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLTGRWR*KASQMQ
Trigger: CTGCATTTGAGAAGCTTTGCAGCGCCATCTGCCGGT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAGCAGCCTCTCAGCCTaGAGTGATGCTACGACACCG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSSLSA*SDATTP
Trigger: CGGTGTCGTAGCATCACTGCAGGCTGAGAGGCTGCT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAGCAGCCTCTCAGCCTaGAGTGATGCTACGACACCG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASSLSA*SDATTP
Trigger: CGGTGTCGTAGCATCACTGCAGGCTGAGAGGCTGCT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCTTCTCAGGCCCTCTaGCCCGAGAGCCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASSQAL*PESLLT
Trigger: AGTCAACAGGCTCTCGGGCCAGAGGGCCTGAGAAGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCGGGACAAGGACTTTTaGGGGGAGGTCAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNRDKDF*GEVKGH
Trigger: GTGCCCTTTGACCTCCCCCCAAAAGTCCTTGTCCCG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGCACGTGAGAGCCAGTaGCACCGAGAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSARESQ*HREGAP
Trigger: CGGGGCGCCCTCTCGGTGCCACTGGCTCTCACGTGC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGCACGTGAGAGCCAGTaGCACCGAGAGGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLARESQ*HREGAP
Trigger: CGGGGCGCCCTCTCGGTGCCACTGGCTCTCACGTGC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGCTTCTTCCTCGGCATaGCCCGGACCAGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFASSSA*PGPVTW
Trigger: CCAGGTGACTGGTCCGGGCCATGCCGAGGAAGAAGC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQCGCWN*SAAHLE
Trigger: TTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCAGTCGGTATCGATTTaGGTCGTAGCCTCGTGGACC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQQSVSI*VVASWT
Trigger: GGTCCACGAGGCTACGACCCAAATCGATACCGACTG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGTAGCGCTCTTGGGTTaGGCCAGTTGGCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNVALLG*ASWLHC
Trigger: GCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTAC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCCGTGGTCTCTGGATaGGACTCCCAGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASVVSG*DSQVPF
Trigger: GAAAGGCACCTGGGAGTCCCATCCAGAGACCACGGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTCCGTGGTCTCTGGATaGGACTCCCAGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSVVSG*DSQVPF
Trigger: GAAAGGCACCTGGGAGTCCCATCCAGAGACCACGGA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCAGCTCCGTGGTCTCTaGATGGGACTCCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFQLRGL*MGLPGA
Trigger: GGCACCTGGGAGTCCCATCCAGAGACCACGGAGCTG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAAACCACCAGCTCCGTaGTCTCTGGATGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNKPPAP*SLDGTP
Trigger: GGGAGTCCCATCCAGAGACCACGGAGCTGGTGGTTT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAGCCAGGCTGGACCCTaGAGCCGAGGTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSQAGP*SRGWGL
Trigger: GAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGAGGGAAGATGGCGCTaGGCGAGGAACTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEEGRWR*ARNSAL
Trigger: GAGTGCTGAGTTCCTCGCCCAGCGCCATCTTCCCTC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTACTGGGAGGGAAGATaGCGCTGGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAYWEGR*RWARNS
Trigger: TGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCAAAAGCAAAGATACTaGGAGGGAAGATGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPQKQRY*EGRWRW
Trigger: CCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGAGACTAGCCAGCTATaGAAGCCACCAGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNETSQL*KPPEPQ
Trigger: CTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGCACTCCCCTCACTaGGACTCTCAGTACCACGCC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGHSPH*DSQYHA
Trigger: GGCGTGGTACTGAGAGTCCCAGTGAGGGGAGTGCCC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAGCAAAGGGAAGGTGTaGGGTTGCCGCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSKGKV*GCRHAW
Trigger: CCAGGCATGGCGGCAACCTCACACCTTCCCTTTGCT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAGCCTGTTGACTCTGTaGCACACTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSLLTL*HTLRSW
Trigger: CCAGCTCCTCAGAGTGTGTCACAGAGTCAACAGGCT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAGCCTGTTGACTCTGTaGCACACTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASLLTL*HTLRSW
Trigger: CCAGCTCCTCAGAGTGTGTCACAGAGTCAACAGGCT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGGCGTGGACACGCTaGGGCTATACTACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGAWTR*GYTTKP
Trigger: GGGCTTTGTAGTATAGCCTCAGCGTGTCCACGCCCC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCCCGAGGAAAAGAGGTaGAAAGGACGACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNPEEKR*KGRRGA
Trigger: AGCTCCACGTCGTCCTTTTCACCTCTTTTCCTCGGG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGTTGGCTCCATTGCTaGATCAGTCTGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSWLHC*ISLLLH
Trigger: GTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCCCCACCAGCCCATTaGTCAGCGAGGACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGAPPAH*SARTFP
Trigger: TGGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCCAGGGGTGTTCCGCTaGGGGGTCCTCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSPGVFR*GVLSLW
Trigger: CCAGAGGCTGAGGACCCCTCAGCGGAACACCCCTGG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCCAGGGGTGTTCCGCTaGGGGGTCCTCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSPGVFR*GVLSLW
Trigger: CCAGAGGCTGAGGACCCCTCAGCGGAACACCCCTGG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCAGGGGTGTTCCGCTaGGGGGTCCTCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPGVFR*GVLSLW
Trigger: CCAGAGGCTGAGGACCCCTCAGCGGAACACCCCTGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAAGCCTAAGGTGCCCTaGCTCACGAGAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQKPKVP*LTRELI
Trigger: AATCAGCTCTCTCGTGAGTCAGGGCACCTTAGGCTT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGCGGAGAAGTCCCCTaGGCATCTCTGAACATCATG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSGEVP*ASLNIM
Trigger: CATGATGTTCAGAGATGCTCAGGGGACTTCTCCGCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCTTACCACTTGGAAGTaGCTGGCAGGTAGTAATTGC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPLTTWK*LAGSNC
Trigger: GCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTAGGACGCTTCCCCTaGTTCACCAAGACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLGRFP*FTKTSL
Trigger: TAAGCTGGTCTTGGTGAATCAGGGGAAGCGTCCTAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCAGGATGTATACTCTTaGCTTGTCTCTCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPQDVYS*LVSLPY
Trigger: GTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCAGGAAACAGACCCATaGCCCACCCAGTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNQETDP*PTQLPS
Trigger: ACTTGGCAACTGGGTGGGTCATGGGTCTGTTTCCTG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCAGGAAACAGACCCATaGCCCACCCAGTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAQETDP*PTQLPS
Trigger: ACTTGGCAACTGGGTGGGTCATGGGTCTGTTTCCTG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGTGAGGTTGCCGCCATaGCTGGCAGAGACGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDVRLPP*LAETEG
Trigger: TCCCTCCGTCTCTGCCAGGCATGGCGGCAACCTCAC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGTGGCGATCTTACGGTaGGACAGTCCTCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAVAILR*DSPLLR
Trigger: CCTGAGAAGAGGACTGTCGCACCGTAAGATCGCCAC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGTGGCGATCTTACGGTaGGACAGTCCTCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNVAILR*DSPLLR
Trigger: CCTGAGAAGAGGACTGTCGCACCGTAAGATCGCCAC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGCACGAAGTTGTGCCTaGAGCTGTTACCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPARSCA*SCYHSN
Trigger: GTTACTATGGTAACAGCTGCAGGCACAACTTCGTGC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAGACTGCGTCCAGGTTaGTGGACTACACCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFRLRPG*WTTPGA
Trigger: TGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGTGGAAAGCCGAGACTaGGTCCAGGTTGCTGGACTA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNVESRD*VQVAGL
Trigger: TAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCAC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGTGTCATCACTACCTTaGGCTCCCGGGAGAACCTAC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAVSSLP*APGRTY
Trigger: GTAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACAC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTTGCTCCCGGGCTaGTCTCTTTCTCCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQNLLPG*SLSPLY
Trigger: GTAGAGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACACCGGCTGTAGAACTTaGTCCCGGGCTGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNTGCRT*SRAALF
Trigger: AAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCTTCTCCCGCCAGCTaGTCAAGTCCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASSPAS*SSPLSP
Trigger: TGGGGAAAGTGGACTTGAGCAGCTGGCGGGAGAAGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTGCTCCACCAGGACTaGTGGGCCATCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLLHQD*WAILLF
Trigger: GAAGAGGAGGATGGCCCAGCAGTCCTGGTGGAGCAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACTGCTCCACCAGGACTaGTGGGCCATCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGLLHQD*WAILLF
Trigger: GAAGAGGAGGATGGCCCAGCAGTCCTGGTGGAGCAG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCAAGAGACTGTTGGCTaGTCTGTACACATCATTCCG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPQETVG*SVHIIP
Trigger: CGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCTCCTCCTCGTCACCTaGTGGCCCCACCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLLLLVT*WPHPAL
Trigger: CAGGGCAGGGTGGGGCCAGCAGGTGACGAGGAGGAG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTCCTCCTCGTCACCTaGTGGCCCCACCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLLLVT*WPHPAL
Trigger: CAGGGCAGGGTGGGGCCAGCAGGTGACGAGGAGGAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGGCACACAGGGCTGCTaGTCAAATCGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAGTQGC*SNRRMA
Trigger: TGCCATTCTCCGATTTGAGCAGCAGCCCTGTGTGCC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGGCACACAGGGCTGCTaGTCAAATCGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNGTQGC*SNRRMA
Trigger: TGCCATTCTCCGATTTGAGCAGCAGCCCTGTGTGCC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGERRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCAGCAAAGCCTAAGGTaGCCTGACTCACGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAQQSLR*PDSRES
Trigger: GCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCAGCAAAGCCTAAGGTaGCCTGACTCACGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNQQSLR*PDSRES
Trigger: GCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGGGGGTGTCAGGAGTTaGCTCCTGCCAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFGGVRS*LLPGLQ
Trigger: CTGAAGACCTGGCAGGAGGCAACTCCTGACACCCCC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGTTGAGCCGTATCAGTaGGAACCAGCTGAATGTCAG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLVEPYQ*EPAECQ
Trigger: CTGACATTCAGCTGGTTCGCACTGATACGGCTCAAC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCGGGACAAGGACTTTTaGGGGGAGGTCAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGERDKDF*GEVKGH
Trigger: GTGCCCTTTGACCTCCCCCCAAAAGTCCTTGTCCCG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTGGGTGCCGACCTGTTaGGACCCAAATTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNWVPTC*DPNSLW
Trigger: CCACAAGGAATTTGGGTCCCAACAGGTCGGCACCCA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACCCGGACCAGTCACCTaGCCCGCCCTCCGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQPGPVT*PALRRA
Trigger: AGCTCGGCGGAGGGCGGGCCAGGTGACTGGTCCGGG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGCTTCTTCCTCGGCATaGCCCGGACCAGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDASSSA*PGPVTW
Trigger: CCAGGTGACTGGTCCGGGCCATGCCGAGGAAGAAGC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSRCGC*NWSAAH
Trigger: ATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCAGTCGGTATCGATTTaGGTCGTAGCCTCGTGGACC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNQSVSI*VVASWT
Trigger: GGTCCACGAGGCTACGACCCAAATCGATACCGACTG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGTAGCGCTCTTGGGTTaGGCCAGTTGGCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEVALLG*ASWLHC
Trigger: GCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTAC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAACCCACACAGCCGATaGTCACCACCCCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGANPHSR*SPPHPC
Trigger: ACAAGGATGGGGTGGTGACCATCGGCTGTGTGGGTT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCCTAGGCAGAAGAGATaGGAAGATGAGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAPRQKR*EDEAWA
Trigger: TGCCCAGGCCTCATCTTCCCATCTCTTCTGCCTAGG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTCTGGGTGGCGCAGGTaGAGCAGGGCCTGCACGGGA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSGWRR*SRACTG
Trigger: TCCCGTGCAGGCCCTGCTCCACCTGCGCCACCCAGA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCTGGGTGGCGCAGGTaGAGCAGGGCCTGCACGGGA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSGWRR*SRACTG
Trigger: TCCCGTGCAGGCCCTGCTCCACCTGCGCCACCCAGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGGGTCCTCAGCCTCTaGGTGGCGCAGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGVLSL*VAQVEQ
Trigger: CTGCTCCACCTGCGCCACCCAGAGGCTGAGGACCCC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGGGTCCTCAGCCTCTaGGTGGCGCAGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGVLSL*VAQVEQ
Trigger: CTGCTCCACCTGCGCCACCCAGAGGCTGAGGACCCC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGGGGTCCTCAGCCTCTaGGTGGCGCAGGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSGVLSL*VAQVEQ
Trigger: CTGCTCCACCTGCGCCACCCAGAGGCTGAGGACCCC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCATTCCGAGCCGCCTTaGCTGTCTTGTAACCACGTT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQHSEPP*LSCNHV
Trigger: AACGTGGTTACAAGACAGCCAAGGCGGCTCGGAATG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGCCGCAAGAGACTGTTaGCTGCTCTGTACACATCAT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLAARDC*LLCTHH
Trigger: ATGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCTTTCCTTTGCTCCTTaGTTAACAGGGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPLSFAP*LTGSVC
Trigger: GCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTACAGTCTAACCCTGTaGGGGTGTCAGGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQYSLTL*GCQELP
Trigger: AGGCAACTCCTGACACCCCCACAGGGTTAGACTGTA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAGGCCCAGCAAGAGCTaGACCAAGCCCACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFRPSKS*TKPTSP
Trigger: TGGAGAGGTGGGCTTGGTCCAGCTCTTGCTGGGCCT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAGGCCCAGCAAGAGCTaGACCAAGCCCACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGRPSKS*TKPTSP
Trigger: TGGAGAGGTGGGCTTGGTCCAGCTCTTGCTGGGCCT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTCTGTGACACACTCTaGGGAGCTGGTTGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLCDTL*GAGCGV
Trigger: AACACCACAACCAGCTCCTCAGAGTGTGTCACAGAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAGCGAGGCGAGAGGATaGTGCGGGGTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLSEARG*CGVGYW
Trigger: CCAGTAGCCCACCCCGCATCATCCTCTCGCCTCGCT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTCTTCTGCTTCACGCTaGATGGCTTCTTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSSASR*MASSSA
Trigger: TGCCGAGGAAGAAGCCATTCAGCGTGAAGCAGAAGA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCCAACAACTCAGCACTaGCCGGCTGTAGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNPTTQH*PAVELA
Trigger: AGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAGGAAAGTCCAGAACTaGGCCAGGCTGATACACCTC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNRKVQN*ARLIHL
Trigger: GAGGTGTATCAGCCTGGCTCAGTTCTGGACTTTCCT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTGTGCTCAAAGTAGCTaGGTTTCTCAGAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPCAQSS*VSQRSK
Trigger: CTTACTCCTCTGAGAAACTCAGCTACTTTGAGCACA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAGTTGGCTCCATTGCTaGATCAGTCTGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSWLHC*ISLLLH
Trigger: GTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAAAGGGCCAGATAATTaGACTATCCTGGACCACACA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPKGPDN*TILDHT
Trigger: TGTGTGGTCCAGGATAGTTCAATTATCTGGCCCTTT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCTTACCACTTGGAAGTaGCTGGCAGGTAGTAATTGC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLLTTWK*LAGSNC
Trigger: GCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTAGGACGCTTCCCCTaGTTCACCAAGACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALGRFP*FTKTSL
Trigger: TAAGCTGGTCTTGGTGAATCAGGGGAAGCGTCCTAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTAGGACGCTTCCCCTaGTTCACCAAGACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLGRFP*FTKTSL
Trigger: TAAGCTGGTCTTGGTGAATCAGGGGAAGCGTCCTAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAGTTGTCATGTTTCTTaGCCTTTGCTGTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSCHVS*PLLSPL
Trigger: CAGAGGAGACAGCAAAGGTCAAGAAACATGACAACT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTGCACCCTCTGCCTCTaGACAAGTTACAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQCTLCL*TSYSLP
Trigger: TGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCAGGAAACAGACCCATaGCCCACCCAGTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEQETDP*PTQLPS
Trigger: ACTTGGCAACTGGGTGGGTCATGGGTCTGTTTCCTG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCCACCGGCGCCTGCCTaGGGGCACTCCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFPPAPA*GHSPHW
Trigger: CCAGTGAGGGGAGTGCCCTCAGGCAGGCGCCGGTGG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCGCTGTTCCCTCCTGTaGCAGAAGCCACCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSRCSLL*QKPPAP
Trigger: AGGCGCCGGTGGCTTCTGTCACAGGAGGGAACAGCG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCAGAGTGCTTCAAGATaGAGGCGCAAAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAQSASR*RRKAAS
Trigger: AGAGGCTGCTTTGCGCCTTCATCTTGAAGCACTCTG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGTGGCGATCTTACGGTaGGACAGTCCTCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEVAILR*DSPLLR
Trigger: CCTGAGAAGAGGACTGTCGCACCGTAAGATCGCCAC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGCACGAAGTTGTGCCTaGAGCTGTTACCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLARSCA*SCYHSN
Trigger: GTTACTATGGTAACAGCTGCAGGCACAACTTCGTGC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATCTGAGAGTCCTGGGTaGCGACCTGTTGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSESPG*RPVGTQ
Trigger: TTGGGTCCCAACAGGTCGGCACCCAGGACTCTCAGA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGTGGAAAGCCGAGACTaGGTCCAGGTTGCTGGACTA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEVESRD*VQVAGL
Trigger: TAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCAC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCGCTCCCGTTTGTCCTaGAACTGCTTCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGARSRLS*NCFFFC
Trigger: GCAGAAGAAGAAGCAGTTGCAGGACAAACGGGAGCG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAACTTGCTCCCGGGCTaGTCTCTTTCTCCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNNLLPG*SLSPLY
Trigger: GTAGAGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTCTTCTCCCGCCAGCTaGTCAAGTCCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGESSPAS*SSPLSP
Trigger: TGGGGAAAGTGGACTTGAGCAGCTGGCGGGAGAAGA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGCCAGAACCTGCAACTaGCTAGGCAGAAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEARTCN*LGRRDG
Trigger: CCCATCTCTTCTGCCTAGGCAGTTGCAGGTTCTGGC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGATAGGGTAGATCCCTaGCAGAACCTGCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNDRVDP*QNLQLP
Trigger: AGGCAGTTGCAGGTTCTGGCAGGGATCTACCCTATC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAGGTGGAGCAGGGCCTaGACGGGAATTCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSRWSRA*TGIREA
Trigger: GGCCTCCCGAATTCCCGTGCAGGCCCTGCTCCACCT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGTAACCACGTTTCTCTaGCCAGGCTTCACAGATGTC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQVTTFL*PGFTDV
Trigger: GACATCTGTGAAGCCTGGGCAGAGAAACGTGGTTAC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCAAGAGACTGTTGGCTaGTCTGTACACATCATTCCG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLQETVG*SVHIIP
Trigger: CGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGATGGGACTCCCAGGTaGCTTTCTGTTCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNDGTPR*LSVHCS
Trigger: GCTACAGTGAACAGAAAGGCACCTGGGAGTCCCATC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCTCCTCCTCGTCACCTaGTGGCCCCACCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLLLVT*WPHPAL
Trigger: CAGGGCAGGGTGGGGCCAGCAGGTGACGAGGAGGAG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFRRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGGGGGTGTCAGGAGTTaGCTCCTGCCAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDGGVRS*LLPGLQ
Trigger: CTGAAGACCTGGCAGGAGGCAACTCCTGACACCCCC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTTCCTCAGCCTTCTCTaGTCCCCACACCTATATGTT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLFLSLL*SPHLYV
Trigger: AACATATAGGTGTGGGGAGCAGAGAAGGCTGAGGAA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGACCTCTCCAAAGAAATaGTCCCACCAAGACCATGGA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLTSPKK*SHQDHG
Trigger: TCCATGGTCTTGGTGGGAGCATTTCTTTGGAGAGGT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGTTGAGCCGTATCAGTaGGAACCAGCTGAATGTCAG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQVEPYQ*EPAECQ
Trigger: CTGACATTCAGCTGGTTCGCACTGATACGGCTCAAC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGCAAAGCTTCTCAAATaGAGCGGGAAGTCCATTTAC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPAKLLK*SGKSIY
Trigger: GTAAATGGACTTCCCGCTGCATTTGAGAAGCTTTGC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAGCAGCCTCTCAGCCTaGAGTGATGCTACGACACCG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSSLSA*SDATTP
Trigger: CGGTGTCGTAGCATCACTGCAGGCTGAGAGGCTGCT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGTTGCCGCCATGCCTaGCAGAGACGGAGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGCRHA*QRRREA
Trigger: TGCCTCCCTCCGTCTCTGCCAGGCATGGCGGCAACC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCACACTCTGAGGAGCTaGTTGTGGTGTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNHTLRS*LWCFPA
Trigger: CGCTGGAAAACACCACAACCAGCTCCTCAGAGTGTG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATCTTCTCAGGCCCTCTaGCCCGAGAGCCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSSQAL*PESLLT
Trigger: AGTCAACAGGCTCTCGGGCCAGAGGGCCTGAGAAGA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTCTTCTCAGGCCCTCTaGCCCGAGAGCCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFSSQAL*PESLLT
Trigger: AGTCAACAGGCTCTCGGGCCAGAGGGCCTGAGAAGA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTACCGAGGACCGGATGTaGCGATCTTACGGTGCGACA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFTEDRM*RSYGAT
Trigger: TGTCGCACCGTAAGATCGCCACATCCGGTCCTCGGT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAACCGAGGACCGGATGTaGCGATCTTACGGTGCGACA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGTEDRM*RSYGAT
Trigger: TGTCGCACCGTAAGATCGCCACATCCGGTCCTCGGT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTGGGTGCCGACCTGTTaGGACCCAAATTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEWVPTC*DPNSLW
Trigger: CCACAAGGAATTTGGGTCCCAACAGGTCGGCACCCA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTGCGTCCAGGTTGCTaGACTACACCGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLRPGC*TTPGAR
Trigger: CCGTGCCCCCGGTGTAGTCCAGCAACCTGGACGCAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAACCTACCACTCACCTaGAGGGGGCGGCGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSNLPLT*RGRRSG
Trigger: TCCGCTCCGCCGCCCCCTCCAGGTGAGTGGTAGGTT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTGCGGGGTGGGCTACTaGCACGTGAGAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSCGVGY*HVRASG
Trigger: GCCACTGGCTCTCACGTGCCAGTAGCCCACCCCGCA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTAGCGCTCTTGGGTTaGGCCAGTTGGCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGVALLG*ASWLHC
Trigger: GCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTAC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAACCCACACAGCCGATaGTCACCACCCCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGENPHSR*SPPHPC
Trigger: ACAAGGATGGGGTGGTGACCATCGGCTGTGTGGGTT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCCTAGGCAGAAGAGATaGGAAGATGAGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEPRQKR*EDEAWA
Trigger: TGCCCAGGCCTCATCTTCCCATCTCTTCTGCCTAGG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCATTCCGAGCCGCCTTaGCTGTCTTGTAACCACGTT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNHSEPP*LSCNHV
Trigger: AACGTGGTTACAAGACAGCCAAGGCGGCTCGGAATG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTGTTCACTGTAGCCTaGGGGATGAAAACACAGGCT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLFTVA*GMKTQA
Trigger: AGCCTGTGTTTTCATCCCCCAGGCTACAGTGAACAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATCCGTGGTCTCTGGATaGGACTCCCAGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSVVSG*DSQVPF
Trigger: GAAAGGCACCTGGGAGTCCCATCCAGAGACCACGGA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAGCCAGGCTGGACCCTaGAGCCGAGGTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSQAGP*SRGWGL
Trigger: GAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGAGGGAAGATGGCGCTaGGCGAGGAACTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDEGRWR*ARNSAL
Trigger: GAGTGCTGAGTTCCTCGCCCAGCGCCATCTTCCCTC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGCTCAAATCGGAGAATaGCACAAACTCCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPAQIGE*HKLQKG
Trigger: TCCCTTTTGGAGTTTGTGCCATTCTCCGATTTGAGC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTACAGTCTAACCCTGTaGGGGTGTCAGGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNYSLTL*GCQELP
Trigger: AGGCAACTCCTGACACCCCCACAGGGTTAGACTGTA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTGCGTATTTCAGCGTaGAGGGGAGACTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGVRISA*RGDWAL
Trigger: AAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCAC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGTGCGTATTTCAGCGTaGAGGGGAGACTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFVRISA*RGDWAL
Trigger: AAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCAC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSPRPP*SSIHIV
Trigger: TACTATGTGAATACTTGACCATGGAGGTCTGGGGCT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGACTAGCCAGCTATaGAAGCCACCAGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGETSQL*KPPEPQ
Trigger: CTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTCCACTTGGAAGTGACTaGCAGGTAGTAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPPLGSD*QVVIAQ
Trigger: TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGG...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 72 bp GGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTAGTCAGTTCTAACCTC +
Preference number: 4 (lower is better)
Translates to: GCVFQRGGETGP*VSCVFVVSSNL
Trigger: GAGGTTAGAACTGACTACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAGCCTGTTGACTCTGTaGCACACTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSLLTL*HTLRSW
Trigger: CCAGCTCCTCAGAGTGTGTCACAGAGTCAACAGGCT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGGGAGGGCGGCGGTCTaGGAGTCCTGGGTGCCGACC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDGRAAV*ESWVPT
Trigger: GGTCGGCACCCAGGACTCTCAGACCGCCGCCCTCCC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTGGGCTACTGGCACGTaGGAGCCAGTGGCACCGAGA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLWATGT*EPVAPR
Trigger: TCTCGGTGCCACTGGCTCTCACGTGCCAGTAGCCCA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTGGGCTACTGGCACGTaGGAGCCAGTGGCACCGAGA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSWATGT*EPVAPR
Trigger: TCTCGGTGCCACTGGCTCTCACGTGCCAGTAGCCCA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGCGAGGCGAGAGGATaGTGCGGGGTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSEARG*CGVGYW
Trigger: CCAGTAGCCCACCCCGCATCATCCTCTCGCCTCGCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGAGCGCAGCCCATCTTaGAGCCCTCTCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLERSPS*SPLFRS
Trigger: GGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTTAAGCCTGCGGATATaGTGGGTCACAGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLSLRI*WVTDSP
Trigger: CGGGGAGTCTGTGACCCATCATATCCGCAGGCTTAA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCCAACAACTCAGCACTaGCCGGCTGTAGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEPTTQH*PAVELA
Trigger: AGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGGAAAGTCCAGAACTaGGCCAGGCTGATACACCTC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGERKVQN*ARLIHL
Trigger: GAGGTGTATCAGCCTGGCTCAGTTCTGGACTTTCCT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTGTGCTCAAAGTAGCTaGGTTTCTCAGAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLCAQSS*VSQRSK
Trigger: CTTACTCCTCTGAGAAACTCAGCTACTTTGAGCACA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCAGAAGCTCCTGGAATaGGCAGGTCTGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSQKLLE*AGLAAG
Trigger: CCCTGCCGCCAGACCTGCTCATTCCAGGAGCTTCTG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTGCACCCTCTGCCTCTaGACAAGTTACAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNCTLCL*TSYSLP
Trigger: TGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGCTGTAAAAGCCTCTaGTTTCTCCCCTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGCKSL*FLPFPN
Trigger: GTTTGGAAAGGGGAGAAATCAGAGGCTTTTACAGCC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCAGGATGTATACTCTTaGCTTGTCTCTCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQQDVYS*LVSLPY
Trigger: GTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGACATCTGGGGCTTCTaGTTCCACCTCTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGADIWGF*FHLSKE
Trigger: TTCTTTGGAGAGGTGGAATCAGAAGCCCCAGATGTC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGACATCTGGGGCTTCTaGTTCCACCTCTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNDIWGF*FHLSKE
Trigger: TTCTTTGGAGAGGTGGAATCAGAAGCCCCAGATGTC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCCTTTCTCCTTCACTTaGTCCTTCTTCCTAACATCG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLPFSFT*SFFLTS
Trigger: CGATGTTAGGAAGAAGGATCAAGTGAAGGAGAAAGG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCCACCGGCGCCTGCCTaGGGGCACTCCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDPPAPA*GHSPHW
Trigger: CCAGTGAGGGGAGTGCCCTCAGGCAGGCGCCGGTGG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCAGAGTGCTTCAAGATaGAGGCGCAAAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEQSASR*RRKAAS
Trigger: AGAGGCTGCTTTGCGCCTTCATCTTGAAGCACTCTG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTACTGAAACTTGCTACTaGCACAAGAACGACAATGCA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPTETCY*HKNDNA
Trigger: TGCATTGTCGTTCTTGTGTCAGTAGCAAGTTTCAGT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGTGAGGTTGCCGCCATaGCTGGCAGAGACGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLVRLPP*LAETEG
Trigger: TCCCTCCGTCTCTGCCAGGCATGGCGGCAACCTCAC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTTTACAGATCATAAGTaGAAAAGCGGGCGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLFTDHK*KSGREG
Trigger: CCCTTCTCGCCCGCTTTTGCACTTATGATCTGTAAA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGTGTCATCACTACCTTaGGCTCCCGGGAGAACCTAC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFVSSLP*APGRTY
Trigger: GTAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACAC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTGTCATCACTACCTTaGGCTCCCGGGAGAACCTAC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGVSSLP*APGRTY
Trigger: GTAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACAC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGCTCCCGGCTCCCGCTaGGGCTGTTGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQAPGSR*GCWNWS
Trigger: GCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTACCGGCTGTAGAACTTaGTCCCGGGCTGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFTGCRT*SRAALF
Trigger: AAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAACACCCGCCACAGCTaGCTCCATGTCTCCAGATTG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGNTRHS*LHVSRL
Trigger: CAATCTGGAGACATGGAGGCAGCTGTGGCGGGTGTT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAACACCCGCCACAGCTaGCTCCATGTCTCCAGATTG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFNTRHS*LHVSRL
Trigger: CAATCTGGAGACATGGAGGCAGCTGTGGCGGGTGTT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCATTGCTGAATCAGTCTaGTGCTCCACCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAIAESV*CSTRTA
Trigger: AGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAAT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGCCAGAACCTGCAACTaGCTAGGCAGAAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFARTCN*LGRRDG
Trigger: CCCATCTCTTCTGCCTAGGCAGTTGCAGGTTCTGGC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGAGGCGGCCGTCCACTaGCAGCCGCAAGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSEAAVH*QPQETV
Trigger: AACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGAGGCGGCCGTCCACTaGCAGCCGCAAGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSEAAVH*QPQETV
Trigger: AACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGATGGGACTCCCAGGTaGCTTTCTGTTCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEDGTPR*LSVHCS
Trigger: GCTACAGTGAACAGAAAGGCACCTGGGAGTCCCATC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCTGCTGGCCCCACCCTaGCCTGCAAAACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLLAPP*PAKPPA
Trigger: AGCTGGTGGTTTTGCAGGGCAGGGTGGGGCCAGCAG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCTGCTGGCCCCACCCTaGCCTGCAAAACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLLLAPP*PAKPPA
Trigger: AGCTGGTGGTTTTGCAGGGCAGGGTGGGGCCAGCAG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACCTCCTCACAGGAGCTaGTCAGCTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGPPHRS*SALPLP
Trigger: AGGAAGAGGAAGAGCTGAGCAGCTCCTGTGAGGAGG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCAGCAAAGCCTAAGGTaGCCTGACTCACGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFQQSLR*PDSRES
Trigger: GCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTTCCTCAGCCTTCTCTaGTCCCCACACCTATATGTT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQFLSLL*SPHLYV
Trigger: AACATATAGGTGTGGGGAGCAGAGAAGGCTGAGGAA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAGCAGCCTCTCAGCCTaGAGTGATGCTACGACACCG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSSLSA*SDATTP
Trigger: CGGTGTCGTAGCATCACTGCAGGCTGAGAGGCTGCT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACACCGAGGACCGGATGTaGCGATCTTACGGTGCGACA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDTEDRM*RSYGAT
Trigger: TGTCGCACCGTAAGATCGCCACATCCGGTCCTCGGT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATGGGTGCCGACCTGTTaGGACCCAAATTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGWVPTC*DPNSLW
Trigger: CCACAAGGAATTTGGGTCCCAACAGGTCGGCACCCA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGCTTCTTCCTCGGCATaGCCCGGACCAGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSASSSA*PGPVTW
Trigger: CCAGGTGACTGGTCCGGGCCATGCCGAGGAAGAAGC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTGCTTCACGCTGAATaGCTTCTTCCTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLLHAE*LLPRHG
Trigger: GCCATGCCGAGGAAGAAGCCATTCAGCGTGAAGCAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSRCGC*NWSAAH
Trigger: ATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSRCGC*NWSAAH
Trigger: ATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACAGTCGGTATCGATTTaGGTCGTAGCCTCGTGGACC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGQSVSI*VVASWT
Trigger: GGTCCACGAGGCTACGACCCAAATCGATACCGACTG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCAGTCGGTATCGATTTaGGTCGTAGCCTCGTGGACC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFQSVSI*VVASWT
Trigger: GGTCCACGAGGCTACGACCCAAATCGATACCGACTG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTCATTAGTTGCTCCTTaGACATCTCATAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSLVAP*TSHSSK
Trigger: CTTGGAGCTATGAGATGTCCAAGGAGCAACTAATGA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAAGCTCCGTTCCTCTTaGCTCATTAGTTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQKLRSS*LISCSL
Trigger: CAAGGAGCAACTAATGAGCCAAGAGGAACGGAGCTT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTATACTCATAAAGTGCTaGCGGGAAATTCACAACTGG +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPILIKC*REIHNW
Trigger: CCAGTTGTGAATTTCCCGCCAGCACTTTATGAGTAT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGTAGCGCTCTTGGGTTaGGCCAGTTGGCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDVALLG*ASWLHC
Trigger: GCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTAC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAACCCACACAGCCGATaGTCACCACCCCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFNPHSR*SPPHPC
Trigger: ACAAGGATGGGGTGGTGACCATCGGCTGTGTGGGTT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTATGGCCCGGGGTTCTaGAGACACTCACGACTTTCC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFYGPGF*RHSRLS
Trigger: GGAAAGTCGTGAGTGTCTCCAGAACCCCGGGCCATA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATATGGCCCGGGGTTCTaGAGACACTCACGACTTTCC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGYGPGF*RHSRLS
Trigger: GGAAAGTCGTGAGTGTCTCCAGAACCCCGGGCCATA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTGGGAAGATGAGGCCTaGGCAGTCACAGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFWEDEA*AVTELH
Trigger: GTGAAGCTCTGTGACTGCCCAGGCCTCATCTTCCCA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCATTCCGAGCCGCCTTaGCTGTCTTGTAACCACGTT +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEHSEPP*LSCNHV
Trigger: AACGTGGTTACAAGACAGCCAAGGCGGCTCGGAATG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTGTTCACTGTAGCCTaGGGGATGAAAACACAGGCT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALFTVA*GMKTQA
Trigger: AGCCTGTGTTTTCATCCCCCAGGCTACAGTGAACAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCAGCTCCGTGGTCTCTaGATGGGACTCCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSQLRGL*MGLPGA
Trigger: GGCACCTGGGAGTCCCATCCAGAGACCACGGAGCTG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCAGCTCCGTGGTCTCTaGATGGGACTCCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSQLRGL*MGLPGA
Trigger: GGCACCTGGGAGTCCCATCCAGAGACCACGGAGCTG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAAACCACCAGCTCCGTaGTCTCTGGATGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDKPPAP*SLDGTP
Trigger: GGGAGTCCCATCCAGAGACCACGGAGCTGGTGGTTT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGCCAGGCTGGACCCTaGAGCCGAGGTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSQAGP*SRGWGL
Trigger: GAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTACTGGGAGGGAAGATaGCGCTGGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDYWEGR*RWARNS
Trigger: TGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCAAAAGCAAAGATACTaGGAGGGAAGATGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAQKQRY*EGRWRW
Trigger: CCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLLNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCCACTTGGAAGTGACTaGCAGGTAGTAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLPLGSD*QVVIAQ
Trigger: TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGGCACTCCCCTCACTaGGACTCTCAGTACCACGCC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGHSPH*DSQYHA
Trigger: GGCGTGGTACTGAGAGTCCCAGTGAGGGGAGTGCCC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGGGCACTCCCCTCACTaGGACTCTCAGTACCACGCC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSGHSPH*DSQYHA
Trigger: GGCGTGGTACTGAGAGTCCCAGTGAGGGGAGTGCCC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGGGGCGTGGACACGCTaGGGCTATACTACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSGAWTR*GYTTKP
Trigger: GGGCTTTGTAGTATAGCCTCAGCGTGTCCACGCCCC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGGGCGTGGACACGCTaGGGCTATACTACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGAWTR*GYTTKP
Trigger: GGGCTTTGTAGTATAGCCTCAGCGTGTCCACGCCCC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTGGGCTACTGGCACGTaGGAGCCAGTGGCACCGAGA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVWATGT*EPVAPR
Trigger: TCTCGGTGCCACTGGCTCTCACGTGCCAGTAGCCCA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAGCGAGGCGAGAGGATaGTGCGGGGTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSEARG*CGVGYW
Trigger: CCAGTAGCCCACCCCGCATCATCCTCTCGCCTCGCT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTTAAGCCTGCGGATATaGTGGGTCACAGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLSLRI*WVTDSP
Trigger: CGGGGAGTCTGTGACCCATCATATCCGCAGGCTTAA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACCAACAACTCAGCACTaGCCGGCTGTAGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGPTTQH*PAVELA
Trigger: AGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAGGAAAGTCCAGAACTaGGCCAGGCTGATACACCTC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFRKVQN*ARLIHL
Trigger: GAGGTGTATCAGCCTGGCTCAGTTCTGGACTTTCCT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTGTGCTCAAAGTAGCTaGGTTTCTCAGAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQCAQSS*VSQRSK
Trigger: CTTACTCCTCTGAGAAACTCAGCTACTTTGAGCACA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAGTTGGCTCCATTGCTaGATCAGTCTGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFSWLHC*ISLLLH
Trigger: GTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGCCCCACCAGCCCATTaGTCAGCGAGGACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSAPPAH*SARTFP
Trigger: TGGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGCCCCACCAGCCCATTaGTCAGCGAGGACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSAPPAH*SARTFP
Trigger: TGGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGATGAAAACACAGGCTaGGGCGGCCGTCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLDENTG*GGRPLP
Trigger: TGGCAGTGGACGGCCGCCTCAGCCTGTGTTTTCATC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGELKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGCCGAAATGCTGAGGTaGAACCCTAAAATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAAEMLR*NPKMVL
Trigger: CAGAACCATTTTAGGGTTTCACCTCAGCATTTCGGC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTTTCTGCCGAAATGCTaGGGTGAAACCCTAAAATGG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQFLPKC*GETLKW
Trigger: CCATTTTAGGGTTTCACCTCAGCATTTCGGCAGAAA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQNFALE*IPGVMS
Trigger: GGACATAACTCCTGGAATTCACTCCAGTGCAAAGTT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTTACCACTTGGAAGTaGCTGGCAGGTAGTAATTGC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLTTWK*LAGSNC
Trigger: GCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTTACCACTTGGAAGTaGCTGGCAGGTAGTAATTGC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALTTWK*LAGSNC
Trigger: GCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGTTGTCATGTTTCTTaGCCTTTGCTGTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSCHVS*PLLSPL
Trigger: CAGAGGAGACAGCAAAGGTCAAGAAACATGACAACT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTGCACCCTCTGCCTCTaGACAAGTTACAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGECTLCL*TSYSLP
Trigger: TGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGGCTGTAAAAGCCTCTaGTTTCTCCCCTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAGCKSL*FLPFPN
Trigger: GTTTGGAAAGGGGAGAAATCAGAGGCTTTTACAGCC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCAGGATGTATACTCTTaGCTTGTCTCTCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNQDVYS*LVSLPY
Trigger: GTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCAGGATGTATACTCTTaGCTTGTCTCTCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAQDVYS*LVSLPY
Trigger: GTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTATTCCTTAACCCTCTaGCATCTGGGGCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQYSLTL*HLGLLI
Trigger: AATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACGCTGTTCCCTCCTGTaGCAGAAGCCACCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQRCSLL*QKPPAP
Trigger: AGGCGCCGGTGGCTTCTGTCACAGGAGGGAACAGCG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACAGAGTGCTTCAAGATaGAGGCGCAAAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGQSASR*RRKAAS
Trigger: AGAGGCTGCTTTGCGCCTTCATCTTGAAGCACTCTG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGTGAGGTTGCCGCCATaGCTGGCAGAGACGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVVRLPP*LAETEG
Trigger: TCCCTCCGTCTCTGCCAGGCATGGCGGCAACCTCAC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTTTACAGATCATAAGTaGAAAAGCGGGCGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQFTDHK*KSGREG
Trigger: CCCTTCTCGCCCGCTTTTGCACTTATGATCTGTAAA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAGACTGCGTCCAGGTTaGTGGACTACACCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSRLRPG*WTTPGA
Trigger: TGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGTGGAAAGCCGAGACTaGGTCCAGGTTGCTGGACTA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDVESRD*VQVAGL
Trigger: TAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCAC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCGCTCCCGTTTGTCCTaGAACTGCTTCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFRSRLS*NCFFFC
Trigger: GCAGAAGAAGAAGCAGTTGCAGGACAAACGGGAGCG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTCTCTACCTCCTCCCTaGTGTCTCTCTCAAAATGCA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSLPPP*CLSQNA
Trigger: TGCATTTTGAGAGAGACAGCAGGGAGGAGGTAGAGA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAACTTGCTCCCGGGCTaGTCTCTTTCTCCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGNLLPG*SLSPLY
Trigger: GTAGAGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACAGGCTCTCAGCAACTaGTCTGGCCCCAGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQQALSN*SGPRAR
Trigger: TCGGGCCCTGGGGCCAGAGCAGTTGCTGAGAGCCTG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTCTTCTCCCGCCAGCTaGTCAAGTCCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSSPAS*SSPLSP
Trigger: TGGGGAAAGTGGACTTGAGCAGCTGGCGGGAGAAGA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGCCAGAACCTGCAACTaGCTAGGCAGAAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDARTCN*LGRRDG
Trigger: CCCATCTCTTCTGCCTAGGCAGTTGCAGGTTCTGGC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAGGTGGAGCAGGGCCTaGACGGGAATTCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQRWSRA*TGIREA
Trigger: GGCCTCCCGAATTCCCGTGCAGGCCCTGCTCCACCT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGATGGGACTCCCAGGTaGCTTTCTGTTCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFDGTPR*LSVHCS
Trigger: GCTACAGTGAACAGAAAGGCACCTGGGAGTCCCATC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGGCCCCACCCTGCCCTaGAAAACCACCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQGPTLP*KTTSSV
Trigger: CACGGAGCTGGTGGTTTTGCAGGGCAGGGTGGGGCC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCTCCTCACAGGAGCTaGTCAGCTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPPHRS*SALPLP
Trigger: AGGAAGAGGAAGAGCTGAGCAGCTCCTGTGAGGAGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGGGGTGTCAGGAGTTaGCTCCTGCCAGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGGVRS*LLPGLQ
Trigger: CTGAAGACCTGGCAGGAGGCAACTCCTGACACCCCC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTATTCCTACCCTCTATTaGTTGAGAGTAGGATATTGC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPIPTLY*LRVGYC
Trigger: GCAATATCCTACTCTCAAGCAATAGAGGGTAGGAAT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTTCCTCAGCCTTCTCTaGTCCCCACACCTATATGTT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAFLSLL*SPHLYV
Trigger: AACATATAGGTGTGGGGAGCAGAGAAGGCTGAGGAA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCACCTCTCCAAAGAAATaGTCCCACCAAGACCATGGA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGATSPKK*SHQDHG
Trigger: TCCATGGTCTTGGTGGGAGCATTTCTTTGGAGAGGT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAACCGGCAGATGGCGCTaGAAAGCTTCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGTGRWR*KASQMQ
Trigger: CTGCATTTGAGAAGCTTTGCAGCGCCATCTGCCGGT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACACACTCTGAGGAGCTaGTTGTGGTGTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGHTLRS*LWCFPA
Trigger: CGCTGGAAAACACCACAACCAGCTCCTCAGAGTGTG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTGGGTGCCGACCTGTTaGGACCCAAATTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDWVPTC*DPNSLW
Trigger: CCACAAGGAATTTGGGTCCCAACAGGTCGGCACCCA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTGCTTCACGCTGAATaGCTTCTTCCTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLLHAE*LLPRHG
Trigger: GCCATGCCGAGGAAGAAGCCATTCAGCGTGAAGCAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDCGCWN*SAAHLE
Trigger: TTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGATACTCATAAAGTGCTaGCGGGAAATTCACAACTGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLILIKC*REIHNW
Trigger: CCAGTTGTGAATTTCCCGCCAGCACTTTATGAGTAT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTGGGAAGATGAGGCCTaGGCAGTCACAGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDWEDEA*AVTELH
Trigger: GTGAAGCTCTGTGACTGCCCAGGCCTCATCTTCCCA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTCTGGGTGGCGCAGGTaGAGCAGGGCCTGCACGGGA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSGWRR*SRACTG
Trigger: TCCCGTGCAGGCCCTGCTCCACCTGCGCCACCCAGA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCATTCCGAGCCGCCTTaGCTGTCTTGTAACCACGTT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFHSEPP*LSCNHV
Trigger: AACGTGGTTACAAGACAGCCAAGGCGGCTCGGAATG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGCCGCAAGAGACTGTTaGCTGCTCTGTACACATCAT +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEAARDC*LLCTHH
Trigger: ATGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGCTCAAATCGGAGAATaGCACAAACTCCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQAQIGE*HKLQKG
Trigger: TCCCTTTTGGAGTTTGTGCCATTCTCCGATTTGAGC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTTTCCTTTGCTCCTTaGTTAACAGGGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALSFAP*LTGSVC
Trigger: GCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTCAGGCACTGGTGTTaGGGCCCTATTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLRHWC*GPIHPH
Trigger: ATGAGGATGAATAGGGCCCCAACACCAGTGCCTGAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGATAATTGAACTATCCTaGACCACACACAGCTACCCT +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLIIELS*TTHSYP
Trigger: AGGGTAGCTGTGTGTGGTCCAGGATAGTTCAATTAT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAGGCCCAGCAAGAGCTaGACCAAGCCCACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSRPSKS*TKPTSP
Trigger: TGGAGAGGTGGGCTTGGTCCAGCTCTTGCTGGGCCT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTTCATTCTCTCTCCCTaGGATGGCTGTAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNFILSP*DGCKSL
Trigger: GAGGCTTTTACAGCCATCCCAGGGAGAGAGAATGAA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAGCGAGGCGAGAGGATaGTGCGGGGTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSEARG*CGVGYW
Trigger: CCAGTAGCCCACCCCGCATCATCCTCTCGCCTCGCT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGAGCGCAGCCCATCTTaGAGCCCTCTCTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQERSPS*SPLFRS
Trigger: GGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAGAACTGAGCCAGGCTaGTACACCTCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSRTEPG*YTSRMS
Trigger: GGACATCCGGGAGGTGTATCAGCCTGGCTCAGTTCT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAGAACTGAGCCAGGCTaGTACACCTCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLRTEPG*YTSRMS
Trigger: GGACATCCGGGAGGTGTATCAGCCTGGCTCAGTTCT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTGTGCTCAAAGTAGCTaGGTTTCTCAGAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGACAQSS*VSQRSK
Trigger: CTTACTCCTCTGAGAAACTCAGCTACTTTGAGCACA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAGTTGGCTCCATTGCTaGATCAGTCTGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDSWLHC*ISLLLH
Trigger: GTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGCCCCACCAGCCCATTaGTCAGCGAGGACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVAPPAH*SARTFP
Trigger: TGGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTCAACAAATGTTCTATaGGTGAATGAATCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSTNVL*VNESLG
Trigger: TCCCAAGGATTCATTCACTCATAGAACATTTGTTGA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATGCACCCTCTGCCTCTaGACAAGTTACAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGCTLCL*TSYSLP
Trigger: TGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGCTGTAAAAGCCTCTaGTTTCTCCCCTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEGCKSL*FLPFPN
Trigger: GTTTGGAAAGGGGAGAAATCAGAGGCTTTTACAGCC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACATCTGGGGCTTCTaGTTCCACCTCTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGDIWGF*FHLSKE
Trigger: TTCTTTGGAGAGGTGGAATCAGAAGCCCCAGATGTC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTATTCCTTAACCCTCTaGCATCTGGGGCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNYSLTL*HLGLLI
Trigger: AATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCCTTTCTCCTTCACTTaGTCCTTCTTCCTAACATCG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNPFSFT*SFFLTS
Trigger: CGATGTTAGGAAGAAGGATCAAGTGAAGGAGAAAGG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGCACGAAGTTGTGCCTaGAGCTGTTACCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEARSCA*SCYHSN
Trigger: GTTACTATGGTAACAGCTGCAGGCACAACTTCGTGC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTTTACAGATCATAAGTaGAAAAGCGGGCGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAFTDHK*KSGREG
Trigger: CCCTTCTCGCCCGCTTTTGCACTTATGATCTGTAAA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTCTCTACCTCCTCCCTaGTGTCTCTCTCAAAATGCA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGESLPPP*CLSQNA
Trigger: TGCATTTTGAGAGAGACAGCAGGGAGGAGGTAGAGA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAACTTGCTCCCGGGCTaGTCTCTTTCTCCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDNLLPG*SLSPLY
Trigger: GTAGAGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCAGGCTCTCAGCAACTaGTCTGGCCCCAGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFQALSN*SGPRAR
Trigger: TCGGGCCCTGGGGCCAGAGCAGTTGCTGAGAGCCTG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAATTGCTGAATCAGTCTaGTGCTCCACCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGIAESV*CSTRTA
Trigger: AGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAAT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGATAGGGTAGATCCCTaGCAGAACCTGCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDDRVDP*QNLQLP
Trigger: AGGCAGTTGCAGGTTCTGGCAGGGATCTACCCTATC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAGGTGGAGCAGGGCCTaGACGGGAATTCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFRWSRA*TGIREA
Trigger: GGCCTCCCGAATTCCCGTGCAGGCCCTGCTCCACCT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCAAGAGACTGTTGGCTaGTCTGTACACATCATTCCG +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEQETVG*SVHIIP
Trigger: CGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGGCCCCACCCTGCCCTaGAAAACCACCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFGPTLP*KTTSSV
Trigger: CACGGAGCTGGTGGTTTTGCAGGGCAGGGTGGGGCC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTCCTCCTCGTCACCTaGTGGCCCCACCCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDLLLVT*WPHPAL
Trigger: CAGGGCAGGGTGGGGCCAGCAGGTGACGAGGAGGAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTAAATATACTTTCCTTTaGTCCTTGGTTAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPKYTFL*SLVNRV
Trigger: GACCCTGTTAACCAAGGAGCAAAGGAAAGTATATTT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAACCAGTCTCCACACTaGAACCATAGTGATCTAAGG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNNQSPH*NHSDLR
Trigger: CCTTAGATCACTATGGTTGCAGTGTGGAGACTGGTT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAACCAGTCTCCACACTaGAACCATAGTGATCTAAGG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGANQSPH*NHSDLR
Trigger: CCTTAGATCACTATGGTTGCAGTGTGGAGACTGGTT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACCTCTCCAAAGAAATaGTCCCACCAAGACCATGGA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGETSPKK*SHQDHG
Trigger: TCCATGGTCTTGGTGGGAGCATTTCTTTGGAGAGGT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGCAAAGCTTCTCAAATaGAGCGGGAAGTCCATTTAC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNAKLLK*SGKSIY
Trigger: GTAAATGGACTTCCCGCTGCATTTGAGAAGCTTTGC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGCAAAGCTTCTCAAATaGAGCGGGAAGTCCATTTAC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAAKLLK*SGKSIY
Trigger: GTAAATGGACTTCCCGCTGCATTTGAGAAGCTTTGC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCAGGCAATTTCAGAGTaGTTCAAGATGAAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAQAISE*FKMKAQ
Trigger: TTGCGCCTTCATCTTGAAGCACTCTGAAATTGCCTG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCAGGCAATTTCAGAGTaGTTCAAGATGAAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNQAISE*FKMKAQ
Trigger: TTGCGCCTTCATCTTGAAGCACTCTGAAATTGCCTG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTCTTCTCAGGCCCTCTaGCCCGAGAGCCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSSQAL*PESLLT
Trigger: AGTCAACAGGCTCTCGGGCCAGAGGGCCTGAGAAGA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGACCGAGGACCGGATGTaGCGATCTTACGGTGCGACA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLTEDRM*RSYGAT
Trigger: TGTCGCACCGTAAGATCGCCACATCCGGTCCTCGGT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCGGGACAAGGACTTTTaGGGGGAGGTCAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSRDKDF*GEVKGH
Trigger: GTGCCCTTTGACCTCCCCCCAAAAGTCCTTGTCCCG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCGGGACAAGGACTTTTaGGGGGAGGTCAAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSRDKDF*GEVKGH
Trigger: GTGCCCTTTGACCTCCCCCCAAAAGTCCTTGTCCCG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCTGCGTCCAGGTTGCTaGACTACACCGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFLRPGC*TTPGAR
Trigger: CCGTGCCCCCGGTGTAGTCCAGCAACCTGGACGCAG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTCATTAGTTGCTCCTTaGACATCTCATAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSLVAP*TSHSSK
Trigger: CTTGGAGCTATGAGATGTCCAAGGAGCAACTAATGA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCGGGAAATTCACAACTaGATGTCGGATATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQREIHN*MSDISD
Trigger: ATCACTGATATCCGACATCCAGTTGTGAATTTCCCG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGTAGCGCTCTTGGGTTaGGCCAGTTGGCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSVALLG*ASWLHC
Trigger: GCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTAC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCATTCCGAGCCGCCTTaGCTGTCTTGTAACCACGTT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDHSEPP*LSCNHV
Trigger: AACGTGGTTACAAGACAGCCAAGGCGGCTCGGAATG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTGTTCACTGTAGCCTaGGGGATGAAAACACAGGCT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLFTVA*GMKTQA
Trigger: AGCCTGTGTTTTCATCCCCCAGGCTACAGTGAACAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCCGTGGTCTCTGGATaGGACTCCCAGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSVVSG*DSQVPF
Trigger: GAAAGGCACCTGGGAGTCCCATCCAGAGACCACGGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGAGGGAAGATGGCGCTaGGCGAGGAACTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVEGRWR*ARNSAL
Trigger: GAGTGCTGAGTTCCTCGCCCAGCGCCATCTTCCCTC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTACTGGGAGGGAAGATaGCGCTGGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLYWEGR*RWARNS
Trigger: TGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCAAAAGCAAAGATACTaGGAGGGAAGATGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFQKQRY*EGRWRW
Trigger: CCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGTGCGTATTTCAGCGTaGAGGGGAGACTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSVRISA*RGDWAL
Trigger: AAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCAC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGTGCGTATTTCAGCGTaGAGGGGAGACTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLVRISA*RGDWAL
Trigger: AAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCAC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGAGACTAGCCAGCTATaGAAGCCACCAGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLETSQL*KPPEPQ
Trigger: CTGGGGCTCTGGTGGCTTCCATAGCTGGCTAGTCTC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGGCCCAGCAAGAGCTaGACCAAGCCCACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVRPSKS*TKPTSP
Trigger: TGGAGAGGTGGGCTTGGTCCAGCTCTTGCTGGGCCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTTCATTCTCTCTCCCTaGGATGGCTGTAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEFILSP*DGCKSL
Trigger: GAGGCTTTTACAGCCATCCCAGGGAGAGAGAATGAA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTACGACACCGGCAGATaGCGCTGCAAAGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDYDTGR*RCKASQ
Trigger: TTGAGAAGCTTTGCAGCGCCATCTGCCGGTGTCGTA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAGCCTGTTGACTCTGTaGCACACTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSLLTL*HTLRSW
Trigger: CCAGCTCCTCAGAGTGTGTCACAGAGTCAACAGGCT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTTAAGCCTGCGGATATaGTGGGTCACAGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLSLRI*WVTDSP
Trigger: CGGGGAGTCTGTGACCCATCATATCCGCAGGCTTAA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGAACTGAGCCAGGCTaGTACACCTCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVRTEPG*YTSRMS
Trigger: GGACATCCGGGAGGTGTATCAGCCTGGCTCAGTTCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCCCGAGGAAAAGAGGTaGAAAGGACGACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSPEEKR*KGRRGA
Trigger: AGCTCCACGTCGTCCTTTTCACCTCTTTTCCTCGGG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCCGAGGAAAAGAGGTaGAAAGGACGACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPEEKR*KGRRGA
Trigger: AGCTCCACGTCGTCCTTTTCACCTCTTTTCCTCGGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGGCTGTAAAAGCCTCTaGTTTCTCCCCTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFGCKSL*FLPFPN
Trigger: GTTTGGAAAGGGGAGAAATCAGAGGCTTTTACAGCC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACAGGATGTATACTCTTaGCTTGTCTCTCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGQDVYS*LVSLPY
Trigger: GTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCGCTGTTCCCTCCTGTaGCAGAAGCCACCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDRCSLL*QKPPAP
Trigger: AGGCGCCGGTGGCTTCTGTCACAGGAGGGAACAGCG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCACTGAAACTTGCTACTaGCACAAGAACGACAATGCA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGATETCY*HKNDNA
Trigger: TGCATTGTCGTTCTTGTGTCAGTAGCAAGTTTCAGT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGCACGAAGTTGTGCCTaGAGCTGTTACCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFARSCA*SCYHSN
Trigger: GTTACTATGGTAACAGCTGCAGGCACAACTTCGTGC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCTGAGAGTCCTGGGTaGCGACCTGTTGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSESPG*RPVGTQ
Trigger: TTGGGTCCCAACAGGTCGGCACCCAGGACTCTCAGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGTGTCATCACTACCTTaGGCTCCCGGGAGAACCTAC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSVSSLP*APGRTY
Trigger: GTAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACAC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGACCGGCTGTAGAACTTaGTCCCGGGCTGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLTGCRT*SRAALF
Trigger: AAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGCCAGAACCTGCAACTaGCTAGGCAGAAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSARTCN*LGRRDG
Trigger: CCCATCTCTTCTGCCTAGGCAGTTGCAGGTTCTGGC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGTAACCACGTTTCTCTaGCCAGGCTTCACAGATGTC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDVTTFL*PGFTDV
Trigger: GACATCTGTGAAGCCTGGGCAGAGAAACGTGGTTAC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCAAGAGACTGTTGGCTaGTCTGTACACATCATTCCG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFQETVG*SVHIIP
Trigger: CGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGAGGCGGCCGTCCACTaGCAGCCGCAAGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFEAAVH*QPQETV
Trigger: AACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGGCCCCACCCTGCCCTaGAAAACCACCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDGPTLP*KTTSSV
Trigger: CACGGAGCTGGTGGTTTTGCAGGGCAGGGTGGGGCC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCTCCTCACAGGAGCTaGTCAGCTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPPHRS*SALPLP
Trigger: AGGAAGAGGAAGAGCTGAGCAGCTCCTGTGAGGAGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGCACACAGGGCTGCTaGTCAAATCGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGTQGC*SNRRMA
Trigger: TGCCATTCTCCGATTTGAGCAGCAGCCCTGTGTGCC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGESLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGAGAGAGCTGATTTCTaGCGAAATGCTGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEERADF*RNAEVK
Trigger: TTTCACCTCAGCATTTCGGCAGAAATCAGCTCTCTC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAACCAGTCTCCACACTaGAACCATAGTGATCTAAGG +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGENQSPH*NHSDLR
Trigger: CCTTAGATCACTATGGTTGCAGTGTGGAGACTGGTT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATTCCTCAGCCTTCTCTaGTCCCCACACCTATATGTT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGFLSLL*SPHLYV
Trigger: AACATATAGGTGTGGGGAGCAGAGAAGGCTGAGGAA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGTTGAGCCGTATCAGTaGGAACCAGCTGAATGTCAG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDVEPYQ*EPAECQ
Trigger: CTGACATTCAGCTGGTTCGCACTGATACGGCTCAAC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTTTACCAACGGCTGTTaGGATCTCTTAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQFTNGC*DLLISL
Trigger: CAAGCTAATTAAGAGATCGCAACAGCCGTTGGTAAA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGCAGCCTCTCAGCCTaGAGTGATGCTACGACACCG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSSLSA*SDATTP
Trigger: CGGTGTCGTAGCATCACTGCAGGCTGAGAGGCTGCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCAGGCAATTTCAGAGTaGTTCAAGATGAAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEQAISE*FKMKAQ
Trigger: TTGCGCCTTCATCTTGAAGCACTCTGAAATTGCCTG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCTTCTCAGGCCCTCTaGCCCGAGAGCCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSSQAL*PESLLT
Trigger: AGTCAACAGGCTCTCGGGCCAGAGGGCCTGAGAAGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTGCGGGGTGGGCTACTaGCACGTGAGAGCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDCGVGY*HVRASG
Trigger: GCCACTGGCTCTCACGTGCCAGTAGCCCACCCCGCA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTGCTTCACGCTGAATaGCTTCTTCCTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLLHAE*LLPRHG
Trigger: GCCATGCCGAGGAAGAAGCCATTCAGCGTGAAGCAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSCGCWN*SAAHLE
Trigger: TTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSCGCWN*SAAHLE
Trigger: TTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCAGTCGGTATCGATTTaGGTCGTAGCCTCGTGGACC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSQSVSI*VVASWT
Trigger: GGTCCACGAGGCTACGACCCAAATCGATACCGACTG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAAGCTCCGTTCCTCTTaGCTCATTAGTTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFKLRSS*LISCSL
Trigger: CAAGGAGCAACTAATGAGCCAAGAGGAACGGAGCTT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGTAGCGCTCTTGGGTTaGGCCAGTTGGCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVVALLG*ASWLHC
Trigger: GCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTAC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGGGAAGATGAGGCCTaGGCAGTCACAGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSWEDEA*AVTELH
Trigger: GTGAAGCTCTGTGACTGCCCAGGCCTCATCTTCCCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTGTTCACTGTAGCCTaGGGGATGAAAACACAGGCT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLFTVA*GMKTQA
Trigger: AGCCTGTGTTTTCATCCCCCAGGCTACAGTGAACAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCCGTGGTCTCTGGATaGGACTCCCAGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSVVSG*DSQVPF
Trigger: GAAAGGCACCTGGGAGTCCCATCCAGAGACCACGGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGAGGGAAGATGGCGCTaGGCGAGGAACTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQEGRWR*ARNSAL
Trigger: GAGTGCTGAGTTCCTCGCCCAGCGCCATCTTCCCTC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTACTGGGAGGGAAGATaGCGCTGGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVYWEGR*RWARNS
Trigger: TGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGGAATTCAGGAGGCTaGTTCTGTGCCCGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSWNSGG*FCARPY
Trigger: ATAGGGGCGGGCACAGAACCAGCCTCCTGAATTCCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGATGAAACCCCTGAGGTaGAAAAAGATAAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQMKPLR*KKIKTS
Trigger: GCTTGTCTTTATCTTTTTCCACCTCAGGGGTTTCAT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGAGTCAGCAAGTCATaGAAGAGGTTTTACAGTCTA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQRVSKS*KRFYSL
Trigger: TAGACTGTAAAACCTCTTCCATGACTTGCTGACTCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCCACTTGGAAGTGACTaGCAGGTAGTAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEPLGSD*QVVIAQ
Trigger: TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAGGCCCAGCAAGAGCTaGACCAAGCCCACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQRPSKS*TKPTSP
Trigger: TGGAGAGGTGGGCTTGGTCCAGCTCTTGCTGGGCCT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTTCATTCTCTCTCCCTaGGATGGCTGTAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFFILSP*DGCKSL
Trigger: GAGGCTTTTACAGCCATCCCAGGGAGAGAGAATGAA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTCTGTGACACACTCTaGGGAGCTGGTTGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLCDTL*GAGCGV
Trigger: AACACCACAACCAGCTCCTCAGAGTGTGTCACAGAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGGGGCGTGGACACGCTaGGGCTATACTACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFGAWTR*GYTTKP
Trigger: GGGCTTTGTAGTATAGCCTCAGCGTGTCCACGCCCC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCTTCTGCTTCACGCTaGATGGCTTCTTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSSASR*MASSSA
Trigger: TGCCGAGGAAGAAGCCATTCAGCGTGAAGCAGAAGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTCTTCTGCTTCACGCTaGATGGCTTCTTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLSSASR*MASSSA
Trigger: TGCCGAGGAAGAAGCCATTCAGCGTGAAGCAGAAGA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTTAAGCCTGCGGATATaGTGGGTCACAGACTCCCCG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLSLRI*WVTDSP
Trigger: CGGGGAGTCTGTGACCCATCATATCCGCAGGCTTAA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCAACAACTCAGCACTaGCCGGCTGTAGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPTTQH*PAVELA
Trigger: AGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAGGAAAGTCCAGAACTaGGCCAGGCTGATACACCTC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSRKVQN*ARLIHL
Trigger: GAGGTGTATCAGCCTGGCTCAGTTCTGGACTTTCCT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCCGAGGAAAAGAGGTaGAAAGGACGACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPEEKR*KGRRGA
Trigger: AGCTCCACGTCGTCCTTTTCACCTCTTTTCCTCGGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAGTTGGCTCCATTGCTaGATCAGTCTGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSWLHC*ISLLLH
Trigger: GTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAGCGGAGAAGTCCCCTaGGCATCTCTGAACATCATG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSGEVP*ASLNIM
Trigger: CATGATGTTCAGAGATGCTCAGGGGACTTCTCCGCT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCTAGGACGCTTCCCCTaGTTCACCAAGACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLGRFP*FTKTSL
Trigger: TAAGCTGGTCTTGGTGAATCAGGGGAAGCGTCCTAG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCTAGGACGCTTCCCCTaGTTCACCAAGACCAGCTTA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLLGRFP*FTKTSL
Trigger: TAAGCTGGTCTTGGTGAATCAGGGGAAGCGTCCTAG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAGTTGTCATGTTTCTTaGCCTTTGCTGTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSCHVS*PLLSPL
Trigger: CAGAGGAGACAGCAAAGGTCAAGAAACATGACAACT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAGTTGTCATGTTTCTTaGCCTTTGCTGTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFSCHVS*PLLSPL
Trigger: CAGAGGAGACAGCAAAGGTCAAGAAACATGACAACT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTATTCCTTAACCCTCTaGCATCTGGGGCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFYSLTL*HLGLLI
Trigger: AATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTTACTCGTATATTACTaGCACTGGAACAGACATGTT +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLLVYY*HWNRHV
Trigger: AACATGTCTGTTCCAGTGTCAGTAATATACGAGTAA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCAGAGTGCTTCAAGATaGAGGCGCAAAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSQSASR*RRKAAS
Trigger: AGAGGCTGCTTTGCGCCTTCATCTTGAAGCACTCTG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGCAGTAGCAACTCCATaGTTCCAAGGTAATTTAAAC +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAAVATP*FQGNLN
Trigger: GTTTAAATTACCTTGGAATCATGGAGTTGCTACTGC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGTGGCGATCTTACGGTaGGACAGTCCTCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVVAILR*DSPLLR
Trigger: CCTGAGAAGAGGACTGTCGCACCGTAAGATCGCCAC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATTTACAGATCATAAGTaGAAAAGCGGGCGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGFTDHK*KSGREG
Trigger: CCCTTCTCGCCCGCTTTTGCACTTATGATCTGTAAA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATCTGAGAGTCCTGGGTaGCGACCTGTTGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSESPG*RPVGTQ
Trigger: TTGGGTCCCAACAGGTCGGCACCCAGGACTCTCAGA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGTGGAAAGCCGAGACTaGGTCCAGGTTGCTGGACTA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVVESRD*VQVAGL
Trigger: TAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCAC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCGCTCCCGTTTGTCCTaGAACTGCTTCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLRSRLS*NCFFFC
Trigger: GCAGAAGAAGAAGCAGTTGCAGGACAAACGGGAGCG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCGCTCCCGTTTGTCCTaGAACTGCTTCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSRSRLS*NCFFFC
Trigger: GCAGAAGAAGAAGCAGTTGCAGGACAAACGGGAGCG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAACTTGCTCCCGGGCTaGTCTCTTTCTCCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSNLLPG*SLSPLY
Trigger: GTAGAGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAACACCCGCCACAGCTaGCTCCATGTCTCCAGATTG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVNTRHS*LHVSRL
Trigger: CAATCTGGAGACATGGAGGCAGCTGTGGCGGGTGTT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCTGCTCCACCAGGACTaGTGGGCCATCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFLLHQD*WAILLF
Trigger: GAAGAGGAGGATGGCCCAGCAGTCCTGGTGGAGCAG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGATCCCTGCCAGAACCTaGAACTGCCTAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLIPART*NCLGRR
Trigger: TCTTCTGCCTAGGCAGTTGCAGGTTCTGGCAGGGAT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCATCCCTGCCAGAACCTaGAACTGCCTAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSIPART*NCLGRR
Trigger: TCTTCTGCCTAGGCAGTTGCAGGTTCTGGCAGGGAT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGATAGGGTAGATCCCTaGCAGAACCTGCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLDRVDP*QNLQLP
Trigger: AGGCAGTTGCAGGTTCTGGCAGGGATCTACCCTATC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCAAGAGACTGTTGGCTaGTCTGTACACATCATTCCG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDQETVG*SVHIIP
Trigger: CGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGAGGCGGCCGTCCACTaGCAGCCGCAAGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDEAAVH*QPQETV
Trigger: AACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGATGGGACTCCCAGGTaGCTTTCTGTTCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSDGTPR*LSVHCS
Trigger: GCTACAGTGAACAGAAAGGCACCTGGGAGTCCCATC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGATGGGACTCCCAGGTaGCTTTCTGTTCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSDGTPR*LSVHCS
Trigger: GCTACAGTGAACAGAAAGGCACCTGGGAGTCCCATC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTGCTGGCCCCACCCTaGCCTGCAAAACCACCAGCT +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDLLAPP*PAKPPA
Trigger: AGCTGGTGGTTTTGCAGGGCAGGGTGGGGCCAGCAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCTCCTCACAGGAGCTaGTCAGCTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPPHRS*SALPLP
Trigger: AGGAAGAGGAAGAGCTGAGCAGCTCCTGTGAGGAGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGGGGGCACACAGGGCTaGTGCTCAAATCGGAGAATG +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQGGTQG*CSNRRM
Trigger: CATTCTCCGATTTGAGCAGCAGCCCTGTGTGCCCCC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGAGAGAGCTGATTTCTaGCGAAATGCTGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFERADF*RNAEVK
Trigger: TTTCACCTCAGCATTTCGGCAGAAATCAGCTCTCTC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCAGCAAAGCCTAAGGTaGCCTGACTCACGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVQQSLR*PDSRES
Trigger: GCTCTCTCGTGAGTCAGGGCACCTTAGGCTTTGCTG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLVLFKL*TGVNSR
Trigger: CCTGGAATTCACTCCAGTGCAAAGTTTAAATAATAC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGELFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAACCAGTCTCCACACTaGAACCATAGTGATCTAAGG +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGNQSPH*NHSDLR
Trigger: CCTTAGATCACTATGGTTGCAGTGTGGAGACTGGTT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTTCCTCAGCCTTCTCTaGTCCCCACACCTATATGTT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDFLSLL*SPHLYV
Trigger: AACATATAGGTGTGGGGAGCAGAGAAGGCTGAGGAA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACACCTCTCCAAAGAAATaGTCCCACCAAGACCATGGA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDTSPKK*SHQDHG
Trigger: TCCATGGTCTTGGTGGGAGCATTTCTTTGGAGAGGT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTTTACCAACGGCTGTTaGGATCTCTTAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAFTNGC*DLLISL
Trigger: CAAGCTAATTAAGAGATCGCAACAGCCGTTGGTAAA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGCAAAGCTTCTCAAATaGAGCGGGAAGTCCATTTAC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFAKLLK*SGKSIY
Trigger: GTAAATGGACTTCCCGCTGCATTTGAGAAGCTTTGC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTACCGGCAGATGGCGCTaGAAAGCTTCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSTGRWR*KASQMQ
Trigger: CTGCATTTGAGAAGCTTTGCAGCGCCATCTGCCGGT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGACCGGCAGATGGCGCTaGAAAGCTTCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLTGRWR*KASQMQ
Trigger: CTGCATTTGAGAAGCTTTGCAGCGCCATCTGCCGGT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCAGGCAATTTCAGAGTaGTTCAAGATGAAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFQAISE*FKMKAQ
Trigger: TTGCGCCTTCATCTTGAAGCACTCTGAAATTGCCTG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCACACTCTGAGGAGCTaGTTGTGGTGTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLHTLRS*LWCFPA
Trigger: CGCTGGAAAACACCACAACCAGCTCCTCAGAGTGTG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCACACTCTGAGGAGCTaGTTGTGGTGTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSHTLRS*LWCFPA
Trigger: CGCTGGAAAACACCACAACCAGCTCCTCAGAGTGTG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCTGCTTCACGCTGAATaGCTTCTTCCTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLLHAE*LLPRHG
Trigger: GCCATGCCGAGGAAGAAGCCATTCAGCGTGAAGCAG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVCGCWN*SAAHLE
Trigger: TTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTATGGCCCGGGGTTCTaGAGACACTCACGACTTTCC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVYGPGF*RHSRLS
Trigger: GGAAAGTCGTGAGTGTCTCCAGAACCCCGGGCCATA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCTAGGCAGAAGAGATaGGAAGATGAGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPRQKR*EDEAWA
Trigger: TGCCCAGGCCTCATCTTCCCATCTCTTCTGCCTAGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAAACCACCAGCTCCGTaGTCTCTGGATGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQKPPAP*SLDGTP
Trigger: GGGAGTCCCATCCAGAGACCACGGAGCTGGTGGTTT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGAGGGAAGATGGCGCTaGGCGAGGAACTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFEGRWR*ARNSAL
Trigger: GAGTGCTGAGTTCCTCGCCCAGCGCCATCTTCCCTC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGCTCAAATCGGAGAATaGCACAAACTCCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFAQIGE*HKLQKG
Trigger: TCCCTTTTGGAGTTTGTGCCATTCTCCGATTTGAGC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTGGAATGAGCAGGTCTaGCGGCAGGGGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDWNEQV*RQGAHR
Trigger: CCTGTGTGCCCCCTGCCGCCAGACCTGCTCATTCCA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCTCAGCCTCAGGCACTaGTGTTGGGGCCCTATTCAT +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLSLRH*CWGPIH
Trigger: ATGAATAGGGCCCCAACACCAGTGCCTGAGGCTGAG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTGCCTTATTCAATTTTaGTTATTGTCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: DKRVRISAWRGDWALGFLCLIQF*LLSQNS
Trigger: TGAGTTCTGGGACAATAACCAAAATTGAATAAGGCA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACCACTTGGAAGTGACTaGCAGGTAGTAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGPLGSD*QVVIAQ
Trigger: TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTACGACACCGGCAGATaGCGCTGCAAAGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSYDTGR*RCKASQ
Trigger: TTGAGAAGCTTTGCAGCGCCATCTGCCGGTGTCGTA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCTCTGTGACACACTCTaGGGAGCTGGTTGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLCDTL*GAGCGV
Trigger: AACACCACAACCAGCTCCTCAGAGTGTGTCACAGAG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCTTCTGCTTCACGCTaGATGGCTTCTTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSSASR*MASSSA
Trigger: TGCCGAGGAAGAAGCCATTCAGCGTGAAGCAGAAGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAGAACTGAGCCAGGCTaGTACACCTCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFRTEPG*YTSRMS
Trigger: GGACATCCGGGAGGTGTATCAGCCTGGCTCAGTTCT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGCCCCACCAGCCCATTaGTCAGCGAGGACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDAPPAH*SARTFP
Trigger: TGGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGATGAAAACACAGGCTaGGGCGGCCGTCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDDENTG*GGRPLP
Trigger: TGGCAGTGGACGGCCGCCTCAGCCTGTGTTTTCATC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDNFALE*IPGVMS
Trigger: GGACATAACTCCTGGAATTCACTCCAGTGCAAAGTT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAAGTTGACATCTAAATaGAATTCCAGCATGGATGAG +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAKLTSK*NSSMDE
Trigger: CTCATCCATGCTGGAATTTCATTTAGATGTCAACTT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACAAAGGGCCAGATAATTaGACTATCCTGGACCACACA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDKGPDN*TILDHT
Trigger: TGTGTGGTCCAGGATAGTTCAATTATCTGGCCCTTT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCAACAAATGTTCTATaGGTGAATGAATCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASTNVL*VNESLG
Trigger: TCCCAAGGATTCATTCACTCATAGAACATTTGTTGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTGCACCCTCTGCCTCTaGACAAGTTACAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLCTLCL*TSYSLP
Trigger: TGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGCACCCTCTGCCTCTaGACAAGTTACAGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSCTLCL*TSYSLP
Trigger: TGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGACATCTGGGGCTTCTaGTTCCACCTCTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLDIWGF*FHLSKE
Trigger: TTCTTTGGAGAGGTGGAATCAGAAGCCCCAGATGTC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCTTTCTCCTTCACTTaGTCCTTCTTCCTAACATCG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPFSFT*SFFLTS
Trigger: CGATGTTAGGAAGAAGGATCAAGTGAAGGAGAAAGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCAGAGTGCTTCAAGATaGAGGCGCAAAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVQSASR*RRKAAS
Trigger: AGAGGCTGCTTTGCGCCTTCATCTTGAAGCACTCTG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTACTGAAACTTGCTACTaGCACAAGAACGACAATGCA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFTETCY*HKNDNA
Trigger: TGCATTGTCGTTCTTGTGTCAGTAGCAAGTTTCAGT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTTTACAGATCATAAGTaGAAAAGCGGGCGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDFTDHK*KSGREG
Trigger: CCCTTCTCGCCCGCTTTTGCACTTATGATCTGTAAA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTCTGAGAGTCCTGGGTaGCGACCTGTTGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSESPG*RPVGTQ
Trigger: TTGGGTCCCAACAGGTCGGCACCCAGGACTCTCAGA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATAGACTGCGTCCAGGTTaGTGGACTACACCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDRLRPG*WTTPGA
Trigger: TGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCATCCCTGCCAGAACCTaGAACTGCCTAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVIPART*NCLGRR
Trigger: TCTTCTGCCTAGGCAGTTGCAGGTTCTGGCAGGGAT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGTAACCACGTTTCTCTaGCCAGGCTTCACAGATGTC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSVTTFL*PGFTDV
Trigger: GACATCTGTGAAGCCTGGGCAGAGAAACGTGGTTAC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGTAACCACGTTTCTCTaGCCAGGCTTCACAGATGTC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSVTTFL*PGFTDV
Trigger: GACATCTGTGAAGCCTGGGCAGAGAAACGTGGTTAC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGATGGGACTCCCAGGTaGCTTTCTGTTCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVDGTPR*LSVHCS
Trigger: GCTACAGTGAACAGAAAGGCACCTGGGAGTCCCATC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACCTCCTCACAGGAGCTaGTCAGCTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQPPHRS*SALPLP
Trigger: AGGAAGAGGAAGAGCTGAGCAGCTCCTGTGAGGAGG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAGGAGGCTGGTTCTGTaGCCGCCCCTATGTACCTCA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFRRLVL*PPLCTS
Trigger: TGAGGTACATAGGGGCGGGCACAGAACCAGCCTCCT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACAAATATACTTTCCTTTaGTCCTTGGTTAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNKYTFL*SLVNRV
Trigger: GACCCTGTTAACCAAGGAGCAAAGGAAAGTATATTT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQVLFKL*TGVNSR
Trigger: CCTGGAATTCACTCCAGTGCAAAGTTTAAATAATAC...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGTTGAGCCGTATCAGTaGGAACCAGCTGAATGTCAG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLVEPYQ*EPAECQ
Trigger: CTGACATTCAGCTGGTTCGCACTGATACGGCTCAAC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCACCGGCAGATGGCGCTaGAAAGCTTCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVTGRWR*KASQMQ
Trigger: CTGCATTTGAGAAGCTTTGCAGCGCCATCTGCCGGT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAGCAGCCTCTCAGCCTaGAGTGATGCTACGACACCG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSSLSA*SDATTP
Trigger: CGGTGTCGTAGCATCACTGCAGGCTGAGAGGCTGCT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCAGGCAATTTCAGAGTaGTTCAAGATGAAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDQAISE*FKMKAQ
Trigger: TTGCGCCTTCATCTTGAAGCACTCTGAAATTGCCTG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACTGCTTCACGCTGAATaGCTTCTTCCTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLLHAE*LLPRHG
Trigger: GCCATGCCGAGGAAGAAGCCATTCAGCGTGAAGCAG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACGGGAAATTCACAACTaGATGTCGGATATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGREIHN*MSDISD
Trigger: ATCACTGATATCCGACATCCAGTTGTGAATTTCCCG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGTAGCGCTCTTGGGTTaGGCCAGTTGGCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFVALLG*ASWLHC
Trigger: GCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTAC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATGGGAAGATGAGGCCTaGGCAGTCACAGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQWEDEA*AVTELH
Trigger: GTGAAGCTCTGTGACTGCCCAGGCCTCATCTTCCCA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCATTCCGAGCCGCCTTaGCTGTCTTGTAACCACGTT +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVHSEPP*LSCNHV
Trigger: AACGTGGTTACAAGACAGCCAAGGCGGCTCGGAATG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGCCGCAAGAGACTGTTaGCTGCTCTGTACACATCAT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLAARDC*LLCTHH
Trigger: ATGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAAACCACCAGCTCCGTaGTCTCTGGATGGGACTCCC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFKPPAP*SLDGTP
Trigger: GGGAGTCCCATCCAGAGACCACGGAGCTGGTGGTTT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCAAAAGCAAAGATACTaGGAGGGAAGATGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSQKQRY*EGRWRW
Trigger: CCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTATCTTTATTCACAATTaGGGTGGCAGAGGGGAGATA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFIFIHN*GGRGEI
Trigger: TATCTCCCCTCTGCCACCCCAATTGTGAATAAAGAT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGCAGAGTGGGAGAATaGGTAGAGGAAGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSCRVGE*VEEAGF
Trigger: GAAACCTGCTTCCTCTACCCATTCTCCCACTCTGCA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGCTCAAATCGGAGAATaGCACAAACTCCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDAQIGE*HKLQKG
Trigger: TCCCTTTTGGAGTTTGTGCCATTCTCCGATTTGAGC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTCTCCCAGAAGCTCCTaGAATGAGCAGGTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSPRSS*NEQVWR
Trigger: CCGCCAGACCTGCTCATTCCAGGAGCTTCTGGGAGA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTTAATCCAAAAACTTaGGTGCCTGAAGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLNPKT*VPEGGV
Trigger: AACCCCACCTTCAGGCACCCAAGTTTTTGGATTAAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGTGAAACCCTAAAATaGTTCTGGCCACCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGETLK*FWPPAR
Trigger: CCTAGCAGGTGGCCAGAACCATTTTAGGGTTTCACC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAGAGTCAGCAAGTCATaGAAGAGGTTTTACAGTCTA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGERVSKS*KRFYSL
Trigger: TAGACTGTAAAACCTCTTCCATGACTTGCTGACTCT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGTGCGTATTTCAGCGTaGAGGGGAGACTGGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFVRISA*RGDWAL
Trigger: AAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCAC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAATAATTGAACTATCCTaGACCACACACAGCTACCCT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGIIELS*TTHSYP
Trigger: AGGGTAGCTGTGTGTGGTCCAGGATAGTTCAATTAT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAGCCTGTTGACTCTGTaGCACACTCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSLLTL*HTLRSW
Trigger: CCAGCTCCTCAGAGTGTGTCACAGAGTCAACAGGCT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACCAACAACTCAGCACTaGCCGGCTGTAGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQPTTQH*PAVELA
Trigger: AGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAGCGGAGAAGTCCCCTaGGCATCTCTGAACATCATG +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSGEVP*ASLNIM
Trigger: CATGATGTTCAGAGATGCTCAGGGGACTTCTCCGCT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAAGTTGACATCTAAATaGAATTCCAGCATGGATGAG +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEKLTSK*NSSMDE
Trigger: CTCATCCATGCTGGAATTTCATTTAGATGTCAACTT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTTACCACTTGGAAGTaGCTGGCAGGTAGTAATTGC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLTTWK*LAGSNC
Trigger: GCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGCTGTAAAAGCCTCTaGTTTCTCCCCTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGCKSL*FLPFPN
Trigger: GTTTGGAAAGGGGAGAAATCAGAGGCTTTTACAGCC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCAGGAAACAGACCCATaGCCCACCCAGTTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFQETDP*PTQLPS
Trigger: ACTTGGCAACTGGGTGGGTCATGGGTCTGTTTCCTG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGACATCTGGGGCTTCTaGTTCCACCTCTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVDIWGF*FHLSKE
Trigger: TTCTTTGGAGAGGTGGAATCAGAAGCCCCAGATGTC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGTGGCGATCTTACGGTaGGACAGTCCTCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFVAILR*DSPLLR
Trigger: CCTGAGAAGAGGACTGTCGCACCGTAAGATCGCCAC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCTGAGAGTCCTGGGTaGCGACCTGTTGGGACCCAA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDSESPG*RPVGTQ
Trigger: TTGGGTCCCAACAGGTCGGCACCCAGGACTCTCAGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGTGGAAAGCCGAGACTaGGTCCAGGTTGCTGGACTA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFVESRD*VQVAGL
Trigger: TAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCAC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTCTCTACCTCCTCCCTaGTGTCTCTCTCAAAATGCA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSSLPPP*CLSQNA
Trigger: TGCATTTTGAGAGAGACAGCAGGGAGGAGGTAGAGA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCTCTACCTCCTCCCTaGTGTCTCTCTCAAAATGCA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSLPPP*CLSQNA
Trigger: TGCATTTTGAGAGAGACAGCAGGGAGGAGGTAGAGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAACTTGCTCCCGGGCTaGTCTCTTTCTCCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQNLLPG*SLSPLY
Trigger: GTAGAGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAACACCCGCCACAGCTaGCTCCATGTCTCCAGATTG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFNTRHS*LHVSRL
Trigger: CAATCTGGAGACATGGAGGCAGCTGTGGCGGGTGTT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTCTTCTCCCGCCAGCTaGTCAAGTCCACTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSSPAS*SSPLSP
Trigger: TGGGGAAAGTGGACTTGAGCAGCTGGCGGGAGAAGA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAATCCCTGCCAGAACCTaGAACTGCCTAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQIPART*NCLGRR
Trigger: TCTTCTGCCTAGGCAGTTGCAGGTTCTGGCAGGGAT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCCTCCTCACAGGAGCTaGTCAGCTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFPPHRS*SALPLP
Trigger: AGGAAGAGGAAGAGCTGAGCAGCTCCTGTGAGGAGG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 4 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNSNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGTATTATTTAAACTTTaGACTGGAGTGAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNVLFKL*TGVNSR
Trigger: CCTGGAATTCACTCCAGTGCAAAGTTTAAATAATAC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCAGGAGTTGCCTCCTaGCAGGTCTTCAGCATAAAA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSGVAS*QVFSIK
Trigger: TTTTATGCTGAAGACCTGGCAGGAGGCAACTCCTGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAATTCCTACCCTCTATTaGTTGAGAGTAGGATATTGC +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGIPTLY*LRVGYC
Trigger: GCAATATCCTACTCTCAAGCAATAGAGGGTAGGAAT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTTCCTCAGCCTTCTCTaGTCCCCACACCTATATGTT +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSFLSLL*SPHLYV
Trigger: AACATATAGGTGTGGGGAGCAGAGAAGGCTGAGGAA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAAGCTCCGTTCCTCTTaGCTCATTAGTTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLKLRSS*LISCSL
Trigger: CAAGGAGCAACTAATGAGCCAAGAGGAACGGAGCTT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCGGGAAATTCACAACTaGATGTCGGATATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDREIHN*MSDISD
Trigger: ATCACTGATATCCGACATCCAGTTGTGAATTTCCCG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTATGGCCCGGGGTTCTaGAGACACTCACGACTTTCC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFYGPGF*RHSRLS
Trigger: GGAAAGTCGTGAGTGTCTCCAGAACCCCGGGCCATA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTGGGAAGATGAGGCCTaGGCAGTCACAGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFWEDEA*AVTELH
Trigger: GTGAAGCTCTGTGACTGCCCAGGCCTCATCTTCCCA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTACTGGGAGGGAAGATaGCGCTGGGCGAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDYWEGR*RWARNS
Trigger: TGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCCACAGCTGTTAGCCTaGAACAGCCGCTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDPQLLA*NSRSHL
Trigger: GAGGTGAGAGCGGCTGTTCCAGGCTAACAGCTGTGG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGCTCAGACCCTGCACTaGATCATCTTTGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQAQTLH*IIFVPP
Trigger: GGGTGGAACAAAGATGATCCAGTGCAGGGTCTGAGC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCTTTCCTTTGCTCCTTaGTTAACAGGGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLLSFAP*LTGSVC
Trigger: GCAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATACAGTCTAACCCTGTaGGGGTGTCAGGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQYSLTL*GCQELP
Trigger: AGGCAACTCCTGACACCCCCACAGGGTTAGACTGTA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAGAGTCAGCAAGTCATaGAAGAGGTTTTACAGTCTA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFRVSKS*KRFYSL
Trigger: TAGACTGTAAAACCTCTTCCATGACTTGCTGACTCT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAATGAAATTCCAGCATaGATGAGAGAAGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGNEIPA*MREALI
Trigger: AATCAGGGCTTCTCTCATCCATGCTGGAATTTCATT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTAATGAAATTCCAGCATaGATGAGAGAAGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFNEIPA*MREALI
Trigger: AATCAGGGCTTCTCTCATCCATGCTGGAATTTCATT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTGCCTTATTCAATTTTaGTTATTGTCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNCLIQF*LLSQNS
Trigger: TGAGTTCTGGGACAATAACCAAAATTGAATAAGGCA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTTCATTCTCTCTCCCTaGGATGGCTGTAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLFILSP*DGCKSL
Trigger: GAGGCTTTTACAGCCATCCCAGGGAGAGAGAATGAA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCCAACAACTCAGCACTaGCCGGCTGTAGAACTTGCT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFPTTQH*PAVELA
Trigger: AGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGTGCTCAAAGTAGCTaGGTTTCTCAGAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSCAQSS*VSQRSK
Trigger: CTTACTCCTCTGAGAAACTCAGCTACTTTGAGCACA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGCCGAAATGCTGAGGTaGAACCCTAAAATGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVAEMLR*NPKMVL
Trigger: CAGAACCATTTTAGGGTTTCACCTCAGCATTTCGGC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTTTCTGCCGAAATGCTaGGGTGAAACCCTAAAATGG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSFLPKC*GETLKW
Trigger: CCATTTTAGGGTTTCACCTCAGCATTTCGGCAGAAA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTTTCTGCCGAAATGCTaGGGTGAAACCCTAAAATGG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLFLPKC*GETLKW
Trigger: CCATTTTAGGGTTTCACCTCAGCATTTCGGCAGAAA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSNFALE*IPGVMS
Trigger: GGACATAACTCCTGGAATTCACTCCAGTGCAAAGTT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATCAACAAATGTTCTATaGGTGAATGAATCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGSTNVL*VNESLG
Trigger: TCCCAAGGATTCATTCACTCATAGAACATTTGTTGA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGTCAATTCTATCTCCTaGGCAACCCATAAAACGATT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDVNSIS*ATHKTI
Trigger: AATCGTTTTATGGGTTGCTCAGGAGATAGAATTGAC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTATTCCTTAACCCTCTaGCATCTGGGGCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLYSLTL*HLGLLI
Trigger: AATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTATTCCTTAACCCTCTaGCATCTGGGGCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSYSLTL*HLGLLI
Trigger: AATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCCTTTCTCCTTCACTTaGTCCTTCTTCCTAACATCG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSPFSFT*SFFLTS
Trigger: CGATGTTAGGAAGAAGGATCAAGTGAAGGAGAAAGG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCCTTTCTCCTTCACTTaGTCCTTCTTCCTAACATCG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSPFSFT*SFFLTS
Trigger: CGATGTTAGGAAGAAGGATCAAGTGAAGGAGAAAGG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGTGTCATCACTACCTTaGGCTCCCGGGAGAACCTAC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDVSSLP*APGRTY
Trigger: GTAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACAC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATACCGGCTGTAGAACTTaGTCCCGGGCTGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDTGCRT*SRAALF
Trigger: AAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAATTGCTGAATCAGTCTaGTGCTCCACCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQIAESV*CSTRTA
Trigger: AGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAAT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGCCAGAACCTGCAACTaGCTAGGCAGAAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDARTCN*LGRRDG
Trigger: CCCATCTCTTCTGCCTAGGCAGTTGCAGGTTCTGGC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTATCCCTGCCAGAACCTaGAACTGCCTAGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFIPART*NCLGRR
Trigger: TCTTCTGCCTAGGCAGTTGCAGGTTCTGGCAGGGAT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGATAGGGTAGATCCCTaGCAGAACCTGCAACTGCCT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFDRVDP*QNLQLP
Trigger: AGGCAGTTGCAGGTTCTGGCAGGGATCTACCCTATC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGTAACCACGTTTCTCTaGCCAGGCTTCACAGATGTC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQVTTFL*PGFTDV
Trigger: GACATCTGTGAAGCCTGGGCAGAGAAACGTGGTTAC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGLKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGAGAGAGCTGATTTCTaGCGAAATGCTGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSERADF*RNAEVK
Trigger: TTTCACCTCAGCATTTCGGCAGAAATCAGCTCTCTC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCAGTTCTTTTCCTGTTaGTATTATCCTATAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEQFFSC*YYPIES
Trigger: TGACTCTATAGGATAATAGCAACAGGAAAAGAACTG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACATTCCTACCCTCTATTaGTTGAGAGTAGGATATTGC +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDIPTLY*LRVGYC
Trigger: GCAATATCCTACTCTCAAGCAATAGAGGGTAGGAAT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGTTGAGCCGTATCAGTaGGAACCAGCTGAATGTCAG +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQVEPYQ*EPAECQ
Trigger: CTGACATTCAGCTGGTTCGCACTGATACGGCTCAAC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCAGGCAATTTCAGAGTaGTTCAAGATGAAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSQAISE*FKMKAQ
Trigger: TTGCGCCTTCATCTTGAAGCACTCTGAAATTGCCTG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTGCTTCACGCTGAATaGCTTCTTCCTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDLLHAE*LLPRHG
Trigger: GCCATGCCGAGGAAGAAGCCATTCAGCGTGAAGCAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAAGCTCCGTTCCTCTTaGCTCATTAGTTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVKLRSS*LISCSL
Trigger: CAAGGAGCAACTAATGAGCCAAGAGGAACGGAGCTT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTATGGCCCGGGGTTCTaGAGACACTCACGACTTTCC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDYGPGF*RHSRLS
Trigger: GGAAAGTCGTGAGTGTCTCCAGAACCCCGGGCCATA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCCTAGGCAGAAGAGATaGGAAGATGAGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDPRQKR*EDEAWA
Trigger: TGCCCAGGCCTCATCTTCCCATCTCTTCTGCCTAGG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTATTCACAATTGGGGTaGCAGAGGGGAGATACCCCC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFYSQLG*QRGDTP
Trigger: GGGGGTATCTCCCCTCTGCCACCCCAATTGTGAATA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATCACCTCAGTTCATCTaGGGAAGGGGCTACAAAGCA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSPQFI*GRGYKA
Trigger: TGCTTTGTAGCCCCTTCCCCAGATGAACTGAGGTGA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCTCAGGCACTGGTGTTaGGGCCCTATTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFLRHWC*GPIHPH
Trigger: ATGAGGATGAATAGGGCCCCAACACCAGTGCCTGAG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLSPRPP*SSIHIV
Trigger: TACTATGTGAATACTTGACCATGGAGGTCTGGGGCT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCCACTTGGAAGTGACTaGCAGGTAGTAATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSPLGSD*QVVIAQ
Trigger: TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTTCATTCTCTCTCCCTaGGATGGCTGTAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVFILSP*DGCKSL
Trigger: GAGGCTTTTACAGCCATCCCAGGGAGAGAGAATGAA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTCTGTGACACACTCTaGGGAGCTGGTTGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDLCDTL*GAGCGV
Trigger: AACACCACAACCAGCTCCTCAGAGTGTGTCACAGAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCTTCTGCTTCACGCTaGATGGCTTCTTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDSSASR*MASSSA
Trigger: TGCCGAGGAAGAAGCCATTCAGCGTGAAGCAGAAGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATAGGAAAGTCCAGAACTaGGCCAGGCTGATACACCTC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDRKVQN*ARLIHL
Trigger: GAGGTGTATCAGCCTGGCTCAGTTCTGGACTTTCCT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATAGTTGGCTCCATTGCTaGATCAGTCTGCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDSWLHC*ISLLLH
Trigger: GTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGTTGTCATGTTTCTTaGCCTTTGCTGTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSCHVS*PLLSPL
Trigger: CAGAGGAGACAGCAAAGGTCAAGAAACATGACAACT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGGCTGTAAAAGCCTCTaGTTTCTCCCCTTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQGCKSL*FLPFPN
Trigger: GTTTGGAAAGGGGAGAAATCAGAGGCTTTTACAGCC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCTTTCTCCTTCACTTaGTCCTTCTTCCTAACATCG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPFSFT*SFFLTS
Trigger: CGATGTTAGGAAGAAGGATCAAGTGAAGGAGAAAGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTTACTCGTATATTACTaGCACTGGAACAGACATGTT +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLLVYY*HWNRHV
Trigger: AACATGTCTGTTCCAGTGTCAGTAATATACGAGTAA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACAAGAGACTGTTGGCTaGTCTGTACACATCATTCCG +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQQETVG*SVHIIP
Trigger: CGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGATGGGACTCCCAGGTaGCTTTCTGTTCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDDGTPR*LSVHCS
Trigger: GCTACAGTGAACAGAAAGGCACCTGGGAGTCCCATC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCAGTTCTTTTCCTGTTaGTATTATCCTATAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFQFFSC*YYPIES
Trigger: TGACTCTATAGGATAATAGCAACAGGAAAAGAACTG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCTATTCATCCTCATCTaGACGTCCCTCAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLLFILI*TSLSSF
Trigger: AAAAGAACTGAGGGACGTGCAGATGAGGATGAATAG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAACCTCTCCAAAGAAATaGTCCCACCAAGACCATGGA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQTSPKK*SHQDHG
Trigger: TCCATGGTCTTGGTGGGAGCATTTCTTTGGAGAGGT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGTTGAGCCGTATCAGTaGGAACCAGCTGAATGTCAG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFVEPYQ*EPAECQ
Trigger: CTGACATTCAGCTGGTTCGCACTGATACGGCTCAAC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATACCGGCAGATGGCGCTaGAAAGCTTCTCAAATGCAG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDTGRWR*KASQMQ
Trigger: CTGCATTTGAGAAGCTTTGCAGCGCCATCTGCCGGT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCGGGAAATTCACAACTaGATGTCGGATATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSREIHN*MSDISD
Trigger: ATCACTGATATCCGACATCCAGTTGTGAATTTCCCG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTATACTCATAAAGTGCTaGCGGGAAATTCACAACTGG +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSILIKC*REIHNW
Trigger: CCAGTTGTGAATTTCCCGCCAGCACTTTATGAGTAT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGCCGCAAGAGACTGTTaGCTGCTCTGTACACATCAT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFAARDC*LLCTHH
Trigger: ATGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTGCAGAGTGGGAGAATaGGTAGAGGAAGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFCRVGE*VEEAGF
Trigger: GAAACCTGCTTCCTCTACCCATTCTCCCACTCTGCA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCCAAACCAGAGTAAATaGAATTCAGGAGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVPNQSK*NSGGWF
Trigger: GAACCAGCCTCCTGAATTCCATTTACTCTGGTTTGG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTCAGGCACTGGTGTTaGGGCCCTATTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDLRHWC*GPIHPH
Trigger: ATGAGGATGAATAGGGCCCCAACACCAGTGCCTGAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSPRPP*SSIHIV
Trigger: TACTATGTGAATACTTGACCATGGAGGTCTGGGGCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGATAATTGAACTATCCTaGACCACACACAGCTACCCT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLIIELS*TTHSYP
Trigger: AGGGTAGCTGTGTGTGGTCCAGGATAGTTCAATTAT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTGCCTTATTCAATTTTaGTTATTGTCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFCLIQF*LLSQNS
Trigger: TGAGTTCTGGGACAATAACCAAAATTGAATAAGGCA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTACGACACCGGCAGATaGCGCTGCAAAGCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDYDTGR*RCKASQ
Trigger: TTGAGAAGCTTTGCAGCGCCATCTGCCGGTGTCGTA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 72 bp TCATCCTCATCTGCACGTCCCTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTCAGCAAGTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: SSSSARPSVLFL*LLSYRVSKSWK
Trigger: CTTCCATGACTTGCTGACTCTATAGGATAATAGCAACAGGAAAAGAACTGAGGGACGTGCAGATGAGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 72 bp AGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTaGTCTCTCTCCCCTACACAGCAAAACAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SCQVRNRMYTLD*SLSPTQQNNPK
Trigger: CTTGGGATTGTTTTGCTGTGTAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGTTTCTGACTTGGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGCAGGTTTCAGAGACTaGGAACCTACTAAACTCCTA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQAGFRD*EPTKLL
Trigger: TAGGAGTTTAGTAGGTTCTCAGTCTCTGAAACCTGC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTGAAGGTGGGGTTTTaGTCATGGCCAGGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDLKVGF*SWPGFK
Trigger: TTTGAAGCCTGGCCATGATCAAAACCCCACCTTCAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTTCCTTTTCTATCAGTaGGGCCAAAGAGCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFFLFYQ*GQRAPD
Trigger: ATCTGGGGCTCTTTGGCCTCACTGATAGAAAAGGAA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGCAGTAGCAACTCCATaGTTCCAAGGTAATTTAAAC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLAVATP*FQGNLN
Trigger: GTTTAAATTACCTTGGAATCATGGAGTTGCTACTGC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATATTGCTGAATCAGTCTaGTGCTCCACCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDIAESV*CSTRTA
Trigger: AGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAAT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGTAACCACGTTTCTCTaGCCAGGCTTCACAGATGTC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDVTTFL*PGFTDV
Trigger: GACATCTGTGAAGCCTGGGCAGAGAAACGTGGTTAC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGTCCTAGAATTATACTaGATGAGCCCCCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQVLELY*MSPQDL
Trigger: CAAATCCTGGGGGCTCATGCAGTATAATTCTAGGAC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTATTCCTACCCTCTATTaGTTGAGAGTAGGATATTGC +
Preference number: 4 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSIPTLY*LRVGYC
Trigger: GCAATATCCTACTCTCAAGCAATAGAGGGTAGGAAT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTTCCTCAGCCTTCTCTaGTCCCCACACCTATATGTT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFFLSLL*SPHLYV
Trigger: AACATATAGGTGTGGGGAGCAGAGAAGGCTGAGGAA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTTTACCAACGGCTGTTaGGATCTCTTAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLFTNGC*DLLISL
Trigger: CAAGCTAATTAAGAGATCGCAACAGCCGTTGGTAAA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGCAAAGCTTCTCAAATaGAGCGGGAAGTCCATTTAC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQAKLLK*SGKSIY
Trigger: GTAAATGGACTTCCCGCTGCATTTGAGAAGCTTTGC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCATTAGTTGCTCCTTaGACATCTCATAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSLVAP*TSHSSK
Trigger: CTTGGAGCTATGAGATGTCCAAGGAGCAACTAATGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAAGCTCCGTTCCTCTTaGCTCATTAGTTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFKLRSS*LISCSL
Trigger: CAAGGAGCAACTAATGAGCCAAGAGGAACGGAGCTT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAGAGTCAGCAAGTCATaGAAGAGGTTTTACAGTCTA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLRVSKS*KRFYSL
Trigger: TAGACTGTAAAACCTCTTCCATGACTTGCTGACTCT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSPRPP*SSIHIV
Trigger: TACTATGTGAATACTTGACCATGGAGGTCTGGGGCT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTTTCTGCCGAAATGCTaGGGTGAAACCCTAAAATGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFFLPKC*GETLKW
Trigger: CCATTTTAGGGTTTCACCTCAGCATTTCGGCAGAAA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAAGTTGACATCTAAATaGAATTCCAGCATGGATGAG +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSKLTSK*NSSMDE
Trigger: CTCATCCATGCTGGAATTTCATTTAGATGTCAACTT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTTCTCCAATAAATTGTaGGTGCCACAAAGAACCATT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLFSNKL*VPQRTI
Trigger: AATGGTTCTTTGTGGCACTCACAATTTATTGGAGAA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000428189.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGTCAATTCTATCTCCTaGGCAACCCATAAAACGATT +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVVNSIS*ATHKTI
Trigger: AATCGTTTTATGGGTTGCTCAGGAGATAGAATTGAC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTATTCCTTAACCCTCTaGCATCTGGGGCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFYSLTL*HLGLLI
Trigger: AATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCCTTTCTCCTTCACTTaGTCCTTCTTCCTAACATCG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFPFSFT*SFFLTS
Trigger: CGATGTTAGGAAGAAGGATCAAGTGAAGGAGAAAGG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTTACTCGTATATTACTaGCACTGGAACAGACATGTT +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLLLVYY*HWNRHV
Trigger: AACATGTCTGTTCCAGTGTCAGTAATATACGAGTAA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTTACTCGTATATTACTaGCACTGGAACAGACATGTT +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSLLVYY*HWNRHV
Trigger: AACATGTCTGTTCCAGTGTCAGTAATATACGAGTAA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGCAGTAGCAACTCCATaGTTCCAAGGTAATTTAAAC +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVAVATP*FQGNLN
Trigger: GTTTAAATTACCTTGGAATCATGGAGTTGCTACTGC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGCACGAAGTTGTGCCTaGAGCTGTTACCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDARSCA*SCYHSN
Trigger: GTTACTATGGTAACAGCTGCAGGCACAACTTCGTGC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTTTACAGATCATAAGTaGAAAAGCGGGCGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFFTDHK*KSGREG
Trigger: CCCTTCTCGCCCGCTTTTGCACTTATGATCTGTAAA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCTCTACCTCCTCCCTaGTGTCTCTCTCAAAATGCA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDSLPPP*CLSQNA
Trigger: TGCATTTTGAGAGAGACAGCAGGGAGGAGGTAGAGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTCCTTATATGCTTGGTaGTCAGCACAGGTCAAGACA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSLYAW*SAQVKT
Trigger: TGTCTTGACCTGTGCTGAGCACCAAGCATATAAGGA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTGGTACATCCTTATATaGTTGGTGCTCAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFWYILI*LVLSTG
Trigger: ACCTGTGCTGAGCACCAAGCATATAAGGATGTACCA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGAGAGAGCTGATTTCTaGCGAAATGCTGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFERADF*RNAEVK
Trigger: TTTCACCTCAGCATTTCGGCAGAAATCAGCTCTCTC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAAATATACTTTCCTTTaGTCCTTGGTTAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLKYTFL*SLVNRV
Trigger: GACCCTGTTAACCAAGGAGCAAAGGAAAGTATATTT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCAAATATACTTTCCTTTaGTCCTTGGTTAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSKYTFL*SLVNRV
Trigger: GACCCTGTTAACCAAGGAGCAAAGGAAAGTATATTT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTTTACCAACGGCTGTTaGGATCTCTTAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVFTNGC*DLLISL
Trigger: CAAGCTAATTAAGAGATCGCAACAGCCGTTGGTAAA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGCAAAGCTTCTCAAATaGAGCGGGAAGTCCATTTAC +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFAKLLK*SGKSIY
Trigger: GTAAATGGACTTCCCGCTGCATTTGAGAAGCTTTGC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCAGGCAATTTCAGAGTaGTTCAAGATGAAGGCGCAA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFQAISE*FKMKAQ
Trigger: TTGCGCCTTCATCTTGAAGCACTCTGAAATTGCCTG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATCATTAGTTGCTCCTTaGACATCTCATAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSLVAP*TSHSSK
Trigger: CTTGGAGCTATGAGATGTCCAAGGAGCAACTAATGA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACGGGAAATTCACAACTaGATGTCGGATATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQREIHN*MSDISD
Trigger: ATCACTGATATCCGACATCCAGTTGTGAATTTCCCG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAGCCCCAGACCTCCATaGTCAAGTATTCACATAGTA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSPRPP*SSIHIV
Trigger: TACTATGTGAATACTTGACCATGGAGGTCTGGGGCT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAATGAAATTCCAGCATaGATGAGAGAAGCCCTGATT +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVNEIPA*MREALI
Trigger: AATCAGGGCTTCTCTCATCCATGCTGGAATTTCATT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTGTGCTCAAAGTAGCTaGGTTTCTCAGAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDCAQSS*VSQRSK
Trigger: CTTACTCCTCTGAGAAACTCAGCTACTTTGAGCACA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATAACTTTGCACTGGAGTaGATTCCAGGAGTTATGTCC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDNFALE*IPGVMS
Trigger: GGACATAACTCCTGGAATTCACTCCAGTGCAAAGTT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATAAAGGGCCAGATAATTaGACTATCCTGGACCACACA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDKGPDN*TILDHT
Trigger: TGTGTGGTCCAGGATAGTTCAATTATCTGGCCCTTT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCAACAAATGTTCTATaGGTGAATGAATCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSTNVL*VNESLG
Trigger: TCCCAAGGATTCATTCACTCATAGAACATTTGTTGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCAGTTCTTTTCCTGTTaGTATTATCCTATAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSQFFSC*YYPIES
Trigger: TGACTCTATAGGATAATAGCAACAGGAAAAGAACTG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAATTCCTACCCTCTATTaGTTGAGAGTAGGATATTGC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQIPTLY*LRVGYC
Trigger: GCAATATCCTACTCTCAAGCAATAGAGGGTAGGAAT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATAACCAGTCTCCACACTaGAACCATAGTGATCTAAGG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDNQSPH*NHSDLR
Trigger: CCTTAGATCACTATGGTTGCAGTGTGGAGACTGGTT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCGGGAAATTCACAACTaGATGTCGGATATCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFREIHN*MSDISD
Trigger: ATCACTGATATCCGACATCCAGTTGTGAATTTCCCG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTATACTCATAAAGTGCTaGCGGGAAATTCACAACTGG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFILIKC*REIHNW
Trigger: CCAGTTGTGAATTTCCCGCCAGCACTTTATGAGTAT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAATGAAACCCCTGAGGTaGAAAAAGATAAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQMKPLR*KKIKTS
Trigger: GCTTGTCTTTATCTTTTTCCACCTCAGGGGTTTCAT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTATAATTGAACTATCCTaGACCACACACAGCTACCCT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFIIELS*TTHSYP
Trigger: AGGGTAGCTGTGTGTGGTCCAGGATAGTTCAATTAT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTGCCTTATTCAATTTTaGTTATTGTCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLCLIQF*LLSQNS
Trigger: TGAGTTCTGGGACAATAACCAAAATTGAATAAGGCA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGTCAATTCTATCTCCTaGGCAACCCATAAAACGATT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFVNSIS*ATHKTI
Trigger: AATCGTTTTATGGGTTGCTCAGGAGATAGAATTGAC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATTACTCGTATATTACTaGCACTGGAACAGACATGTT +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLLVYY*HWNRHV
Trigger: AACATGTCTGTTCCAGTGTCAGTAATATACGAGTAA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATACTGAAACTTGCTACTaGCACAAGAACGACAATGCA +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDTETCY*HKNDNA
Trigger: TGCATTGTCGTTCTTGTGTCAGTAGCAAGTTTCAGT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACTTAAAGGGCTGTTCTaGTCAAATCATAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLKGLF*SNHKCA
Trigger: TGCACATTTATGATTTGAGCAGAACAGCCCTTTAAG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 4 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTTTACCAACGGCTGTTaGGATCTCTTAATTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFFTNGC*DLLISL
Trigger: CAAGCTAATTAAGAGATCGCAACAGCCGTTGGTAAA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCATTAGTTGCTCCTTaGACATCTCATAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDSLVAP*TSHSSK
Trigger: CTTGGAGCTATGAGATGTCCAAGGAGCAACTAATGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATATACTCATAAAGTGCTaGCGGGAAATTCACAACTGG +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDILIKC*REIHNW
Trigger: CCAGTTGTGAATTTCCCGCCAGCACTTTATGAGTAT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAAGTTGACATCTAAATaGAATTCCAGCATGGATGAG +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFKLTSK*NSSMDE
Trigger: CTCATCCATGCTGGAATTTCATTTAGATGTCAACTT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGGGAAACTTGGAAGTTaGCATCTAAATGAAATTCCA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFGKLGS*HLNEIP
Trigger: TGGAATTTCATTTAGATGTCAACTTCCAAGTTTCCC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTTCTCCAATAAATTGTaGGTGCCACAAAGAACCATT +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFFSNKL*VPQRTI
Trigger: AATGGTTCTTTGTGGCACTCACAATTTATTGGAGAA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000428189.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGTCAATTCTATCTCCTaGGCAACCCATAAAACGATT +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDVNSIS*ATHKTI
Trigger: AATCGTTTTATGGGTTGCTCAGGAGATAGAATTGAC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR TCA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGCAGTAGCAACTCCATaGTTCCAAGGTAATTTAAAC +
Preference number: 4 (lower is better)
Translates to: ESRILPYSILVIVPELRDAVATP*FQGNLN
Trigger: GTTTAAATTACCTTGGAATCATGGAGTTGCTACTGC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CCA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATGCCTTATTCAATTTTaGTTATTGTCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQCLIQF*LLSQNS
Trigger: TGAGTTCTGGGACAATAACCAAAATTGAATAAGGCA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR GCA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTCCAACTACACTTTTTaGTATCATCCAATACAGACA +
Preference number: 4 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSNYTF*YHPIQT
Trigger: TGTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 72 bp CTATTGCTTGAGAGTAGGATATTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTCAGGGATATATGTCTG +
Preference number: 4 (lower is better)
Translates to: LLLESRILPYSI*VIVPELRDICL
Trigger: CAGACATATATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTCAAGCAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
3UTR CAA 72 bp TTGAGAGTAGGATATTGCCTTATTCAATTTTGGTTATaGTCCCAGAACTCAGGGATATATGTCTGGCATATA +
Preference number: 4 (lower is better)
Translates to: LRVGYCLIQFWL*SQNSGIYVWHI
Trigger: TATATGCCAGACATATATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.7
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 90 bp CCCGCCGCAGGGGCCCGGGACCCTAGAGGAGGCGGGGCTAGCAGGTaGCGTCAGCGGGCGGGCCCGACAGAATTACCGCCGCGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: PAAGARDPRGGGASR*RQRAGPTELPPRRR
Trigger: TCGCCGCCGCGGCGGTAATTCTGTCGGGCCCGCCCGCTGACGTCACCTGCTAGCCCCGCCTCCTCTAGGGTCCCGGGCCCCTGCGGCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp GGCGAGAGGATGATGCGGGGTGGGCTACTGGCACGTGAGAGCCAGTaGCACCGAGAGGGCGCCCCGGCGGCGAGGAAGGAGGCGCGCGTG +
Preference number: 5 (lower is better)
Translates to: GERMMRGGLLARESQ*HREGAPAARKEARV
Trigger: CACGCGCGCCTCCTTCCTCGCCGCCGGGGCGCCCTCTCGGTGCCACTGGCTCTCACGTGCCAGTAGCCCACCCCGCATCATCCTCTCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 90 bp CCAGGAGCGAGGCGAGAGGATGATGCGGGGTGGGCTACTGGCACGTaGGAGCCAGTGGCACCGAGAGGGCGCCCCGGCGGCGAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PGARREDDAGWATGT*EPVAPRGRPGGEEG
Trigger: TCCTTCCTCGCCGCCGGGGCGCCCTCTCGGTGCCACTGGCTCTCACGTGCCAGTAGCCCACCCCGCATCATCCTCTCGCCTCGCTCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp AGTGGCACCGAGAGGGCGCCCCGGCGGCGAGGAAGGAGGCGCGCGTaGGAGGACCAGGCTAACTCCGTCACGGACGCTACCAACTCGCGT +
Preference number: 5 (lower is better)
Translates to: SGTERAPRRRGRRRA*EDQANSVTDATNSR
Trigger: ACGCGAGTTGGTAGCGTCCGTGACGGAGTTAGCCTGGTCCTCCCACGCGCGCCTCCTTCCTCGCCGCCGGGGCGCCCTCTCGGTGCCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp CAGGCACACCAGGGGTGTTCCGCTGAGGGGTCCTCAGCCTCTGGGTaGCGCAGGTGGAGCAGGGCCTGCACGGGAATTCGGGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QAHQGCSAEGSSASG*RRWSRACTGIREAR
Trigger: CCTGGCCTCCCGAATTCCCGTGCAGGCCCTGCTCCACCTGCGCCACCCAGAGGCTGAGGACCCCTCAGCGGAACACCCCTGGTGTGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS CCA 90 bp TCTGTTCCTCTCGCCGCTCCCGGCTCCCGCTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAAGCCCTGCGGGGAGGGGCCGGTGAC +
Preference number: 5 (lower is better)
Translates to: SVPLAAPGSRCGCWN*SAAHLEALRGGAGD
Trigger: GTCACCGGCCCCTCCCCGCAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAGAGGAACAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416639.1
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000443235.1
ENST00000450423.1
ENST00000458592.1
CDS CCA 90 bp TGTCGGTCTGTTCCTCTCGCCGCTCCCGGCTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCATCTTGAAGCCCTGCGGGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: CRSVPLAAPGSRCGC*NWSAAHLEALRGGA
Trigger: GGCCCCTCCCCGCAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAGAGGAACAGACCGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416639.1
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000443235.1
ENST00000450423.1
ENST00000458592.1
CDS GCA 90 bp CGTCCGAGGTGTCGGTCTGTTCCTCTCGCCGCTCCCGGCTCCCGCTaGGGCTGTTGGAACTGGAGCGCAGCCCATCTTGAAGCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: RPRCRSVPLAAPGSR*GCWNWSAAHLEALR
Trigger: CCGCAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAGAGGAACAGACCGACACCTCGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416639.1
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000443235.1
ENST00000450423.1
ENST00000458592.1
CDS GCA 90 bp CGTCCGAGGTGTCGGTCTGTTCCTCTCGCCGCTCCCGGCTCCCGCTaGGGCTGTTGGAACTGGAGCGCAGCCCATCTTGAAGCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RPRCRSVPLAAPGSR*GCWNWSAAHLEALS
Trigger: AGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAGAGGAACAGACCGACACCTCGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp TGTCGGTCTGTTCCTCTCGCCGCTCCCGGCTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCATCTTGAAGCCCTCTCTTCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: CRSVPLAAPGSRCGC*NWSAAHLEALSSAP
Trigger: GGGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAGAGGAACAGACCGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS GCA 90 bp CCTCATCCGCATCCCGGTCCTCCTCTCCCTCCTCCTCACAGGAGCTaGTCAGCTCTTCCTCTTCCTCCTCCTCCTCGTCACCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PHPHPGPPLPPPHRS*SALPLPPPPRHLLA
Trigger: GGCCAGCAGGTGACGAGGAGGAGGAGGAAGAGGAAGAGCTGAGCAGCTCCTGTGAGGAGGAGGGAGAGGAGGACCGGGATGCGGATGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp CCCGGGCTTGACCTTAGTGGAAAGCCGAGACTGCGTCCAGGTTGCTaGACTACACCGGGGGCACGGTCAGAGGTCTTTAGGGGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: PGLDLSGKPRLRPGC*TTPGARSEVFRGGR
Trigger: CCGCCCTCCCCTAAAGACCTCTGACCGTGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCACTAAGGTCAAGCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp TCTGTTCCTCTCGCCGCTCCCGGCTCCCGCTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAAGCCCTCTCTTCCGCTCCCGTTTGT +
Preference number: 5 (lower is better)
Translates to: SVPLAAPGSRCGCWN*SAAHLEALSSAPVC
Trigger: ACAAACGGGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAGAGGAACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS GCA 90 bp CAGGCTGTCATGATCCTTCCACTGCAGCAGACGCCTCTTCTGCCTTaGCCACCGCCACTGGCAGAGATCACCCCTCAGACACCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: QAVMILPLQQTPLLP*PPPLAEITPQTPWG
Trigger: GCCCCAGGGTGTCTGAGGGGTGATCTCTGCCAGTGGCGGTGGGCAAGGCAGAAGAGGCGTCTGCTGCAGTGGAAGGATCATGACAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CCA 90 bp ACTCATCCTCACCCAGCAGGGCATAAGGGTTTCGGCCAGCCAGGCTaGACCCTGGAGCCGAGGTTGGGGTCTCCTCATCCCCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: THPHPAGHKGFGQPG*TLEPRLGSPHPLLP
Trigger: AGGGAGAAGGGGATGAGGAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCTGGCCGAAACCCTTATGCCCTGCTGGGTGAGGATGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 90 bp TCCCGGCTCCCGCTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTTaGAGCCCTCTCTTCCGCTCCCGTTTGTCCTGCAACTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SRLPLRLLELERSPS*SPLFRSRLSCNCFF
Trigger: GAAGAAGCAGTTGCAGGACAAACGGGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGGAGCGCAGCCCATCTaGAAGCCCTCTCTTCCGCTC +
Preference number: 5 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPGAQPI*KPSLPL
Trigger: GAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS GCA 90 bp CAGGCTGAGGCGGCCGTCCACTGCCAGCCGCAAGAGACTGTTGGCTaGTCTGTACACATCATTCCGAGCCGCCTTGGCTGTCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: QAEAAVHCQPQETVG*SVHIIPSRLGCLVT
Trigger: GGTTACAAGACAGCCAAGGCGGCTCGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTCAGCCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS CCA 90 bp GAGGCCACCACGCACAAGCTGCCACTTCCTTACCCACACAGCCGATaGTCACCACCCCATCCTTGTAGCGCTCTTGGGTTGGGCCAGTTG +
Preference number: 5 (lower is better)
Translates to: EATTHKLPLPYPHSR*SPPHPCSALGLGQL
Trigger: CAACTGGCCCAACCCAAGAGCGCTACAAGGATGGGGTGGTGACCATCGGCTGTGTGGGTAAGGAAGTGGCAGCTTGTGCGTGGTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS TCA 90 bp AGGTGCCTTTCTGTTCACTGTAGCCTGGGGGATGAAAACACAGGCTaGGGCGGCCGTCCACTGCCAGCCGCAAGAGACTGTTGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RCLSVHCSLGDENTG*GGRPLPAARDCWLL
Trigger: GAGCAGCCAACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTCAGCCTGTGTTTTCATCCCCCAGGCTACAGTGAACAGAAAGGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp CTGCCTTGCCCACCGCCACTGGCAGAGATCACCCCTCAGACACCCTaGGGCCTAATGAGACCTGATCGCCCTCTCTCTTCTCCGAATATG +
Preference number: 5 (lower is better)
Translates to: LPCPPPLAEITPQTP*GLMRPDRPLSSPNM
Trigger: CATATTCGGAGAAGAGAGAGGGCGATCAGGTCTCATTAGGCCCCAGGGTGTCTGAGGGGTGATCTCTGCCAGTGGCGGTGGGCAAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGCAGTCGGTATCGATTaGGGTCGTAGCCTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPAVGID*GRSLVD
Trigger: GTCCACGAGGCTACGACCCAAATCGATACCGACTGC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTGTAGCGCTCTTGGGTaGGGCCAGTTGGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPCSALG*GQLAPL
Trigger: CAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGACCCTGGAGCCGAGGTaGGGGTCTCCTCATCCCCTT +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQTLEPR*GSPHPL
Trigger: AAGGGGATGAGGAGACCCCAACCTCGGCTCCAGGGT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 90 bp GCTGGCCAGCTCTCAGGGGCCATAAGACCCTCTCCCCCATCGGCCTaGCTCCCTTTCATCCCACTCAACTTCTTCCGATGTTCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: AGQLSGAIRPSPPSA*LPFIPLNFFRCSVL
Trigger: GAGGACTGAACATCGGAAGAAGTTGAGTGGGATGAAAGGGAGTCAGGCCGATGGGGGAGAGGGTCTTATGGCCCCTGAGAGCTGGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416639.1
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000443235.1
ENST00000450423.1
ENST00000458592.1
CDS GCA 90 bp CTATACTACAAAGCCCCGGGCTTGACCTTAGTGGAAAGCCGAGACTaGGTCCAGGTTGCTGGACTACACCGGGGGCACGGTCAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LYYKAPGLTLVESRD*VQVAGLHRGHGQRS
Trigger: AGACCTCTGACCGTGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCACTAAGGTCAAGCCCGGGGCTTTGTAGTATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp GATACCCCCAGGTCAGTCCAAAAGCAAAGATACTGGGAGGGAAGATaGCGCTGGGCGAGGAACTCAGCACTCATCCTCACCCAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: DTPRSVQKQRYWEGR*RWARNSALILTQQG
Trigger: GCCCTGCTGGGTGAGGATGAGTGCTGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTGGACTGACCTGGGGGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAGGGAAGGTGTGAGGTaGCCGCCATGCCTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAREGVR*PPCLAE
Trigger: CTCTGCCAGGCATGGCGGCAACCTCACACCTTCCCT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCGCCCCACCAGCCCATaGATCAGCGAGGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGARPTSP*ISEDFP
Trigger: GGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGCG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCACCCTGGAGCCGAGGTaGGGGTCTCCTCATCCCCTT +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGATLEPR*GSPHPL
Trigger: AAGGGGATGAGGAGACCCCAACCTCGGCTCCAGGGT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGCCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: DKRVRISAWRGDWALGFLPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 90 bp CAGTCCTCTTCTCAGGCCCTCTGGCCCGAGAGCCTGTTGACTCTGTaGCACACTCTGAGGAGCTGGTTGTGGTGTTTTCCAGCGAGGGAA +
Preference number: 5 (lower is better)
Translates to: QSSSQALWPESLLTL*HTLRSWLWCFPARE
Trigger: TTCCCTCGCTGGAAAACACCACAACCAGCTCCTCAGAGTGTGTCACAGAGTCAACAGGCTCTCGGGCCAGAGGGCCTGAGAAGAGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 90 bp CAGGCTGATACACCTCCCGGATGTCCAGCTCCAACAACTCAGCACTaGCCGGCTGTAGAACTTGCTCCCGGGCTGCTCTCTTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: QADTPPGCPAPTTQH*PAVELAPGLLSFSS
Trigger: AGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGGAGCTGGACATCCGGGAGGTGTATCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS CCA 90 bp GAAGTTGTGCCTGCAGCTGTTACCATAGTAACCGAGGACCGGATGTaGCGATCTTACGGTGCGACAGTCCTCTTCTCAGGCCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: EVVPAAVTIVTEDRM*RSYGATVLFSGPLA
Trigger: GGCCAGAGGGCCTGAGAAGAGGACTGTCGCACCGTAAGATCGCCACATCCGGTCCTCGGTTACTATGGTAACAGCTGCAGGCACAACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp CCCAGGTCAGTCCAAAAGCAAAGATACTGGGAGGGAAGATGGCGCTaGGCGAGGAACTCAGCACTCATCCTCACCCAGCAGGGCATAAGG +
Preference number: 5 (lower is better)
Translates to: PRSVQKQRYWEGRWR*ARNSALILTQQGIR
Trigger: CCTTATGCCCTGCTGGGTGAGGATGAGTGCTGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTGGACTGACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTGGGTGCCGACCTGTaGGGACCCAAATTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLGADL*GPKFLV
Trigger: CACAAGGAATTTGGGTCCCAACAGGTCGGCACCCAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTACAAAGCCCCGGGCTaGACCTTAGTGGAAAGCCGA +
Preference number: 5 (lower is better)
Translates to: DKRVRISAWRGDWALGFLYKAPG*TLVESR
Trigger: TCGGCTTTCCACTAAGGTCAAGCCCGGGGCTTTGTA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCGTGTCATCACTACCTaGCGCTCCCGGGAGAACCTA +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQRVITT*RSRENL
Trigger: TAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACACG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGAGCGCAGCCCATCTaGAAGCCCTCTCTTCCGCTC +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEGAQPI*KPSLPL
Trigger: GAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTCAAAGGGCACGAAGTaGTGCCTGCAGCTGTTACCA +
Preference number: 5 (lower is better)
Translates to: DKRVRISAWRGDWALGFLSKGTK*CLQLLP
Trigger: TGGTAACAGCTGCAGGCACAACTTCGTGCCCTTTGA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGAGACTGCGTCCAGGTaGCTGGACTACACCGGGGGC +
Preference number: 5 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDETASR*LDYTGG
Trigger: GCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCTC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGAGCGCAGCCCATCTaGAAGCCCTCTCTTCCGCTC +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGAQPI*KPSLPL
Trigger: GAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGCAGTCGGTATCGATTaGGGTCGTAGCCTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAAVGID*GRSLVD
Trigger: GTCCACGAGGCTACGACCCAAATCGATACCGACTGC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGGGGCCAGATCCACCTaGTTCAAAACCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNGARST*FKTSTR
Trigger: CCTGGTGCTGGTTTTGAACAAGGTGGATCTGGCCCC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCTTGGGTTGGGCCAGTaGGCTCCATTGCTGAATCAG +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQLGLGQ*APLLNQ
Trigger: CTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACATCCTTGTAGCGCTCTaGGGTTGGGCCAGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNILVAL*GWASWL
Trigger: GAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGAT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCGCCCCACCAGCCCATaGATCAGCGAGGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFRPTSP*ISEDFP
Trigger: GGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGCG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 5 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp GTCTCTCTCAAAATGCAGTCGGTATCGATTTGGGTCGTAGCCTCGTaGACCCAGCCCCTGAGAAGGCTGCTGGTTAAGCCTGCGGATATG +
Preference number: 5 (lower is better)
Translates to: VSLKMQSVSIWVVAS*TQPLRRLLVKPADM
Trigger: CATATCCGCAGGCTTAACCAGCAGCCTTCTCAGGGGCTGGGTCCACGAGGCTACGACCCAAATCGATACCGACTGCATTTTGAGAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACACTCTGAGGAGCTGGTaGTGGTGTTTTCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNTLRSW*WCFPAR
Trigger: CCTCGCTGGAAAACACCACAACCAGCTCCTCAGAGT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTACAAAGCCCCGGGCTaGACCTTAGTGGAAAGCCGA +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNYKAPG*TLVESR
Trigger: TCGGCTTTCCACTAAGGTCAAGCCCGGGGCTTTGTA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGGAGCGCAGCCCATCTaGAAGCCCTCTCTTCCGCTC +
Preference number: 5 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDGAQPI*KPSLPL
Trigger: GAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGGGCCAGATCCACCTaGTTCAAAACCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEGARST*FKTSTR
Trigger: CCTGGTGCTGGTTTTGAACAAGGTGGATCTGGCCCC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCGGCCAGTTGGCTCCATaGCTGAATCAGTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGAGQLAP*LNQSAA
Trigger: AGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCC...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCCTTGGGTTGGGCCAGTaGGCTCCATTGCTGAATCAG +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGALGLGQ*APLLNQ
Trigger: CTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAG...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCTTGGGTTGGGCCAGTaGGCTCCATTGCTGAATCAG +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLGLGQ*APLLNQ
Trigger: CTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGTGTAGCGCTCTTGGGTaGGGCCAGTTGGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGECSALG*GQLAPL
Trigger: CAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACA...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAGCCGCAAGAGACTGTaGGCTGCTCTGTACACATCA +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQSRKRL*AALYTS
Trigger: TGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCT...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCTGGGTGCCGACCTGTaGGGACCCAAATTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLGADL*GPKFLV
Trigger: CACAAGGAATTTGGGTCCCAACAGGTCGGCACCCAG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTCGTGTCATCACTACCTaGCGCTCCCGGGAGAACCTA +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFRVITT*RSRENL
Trigger: TAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACACG...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGGCCAGATCCACCTaGTTCAAAACCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGARST*FKTSTR
Trigger: CCTGGTGCTGGTTTTGAACAAGGTGGATCTGGCCCC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTGTAGCGCTCTTGGGTaGGGCCAGTTGGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFCSALG*GQLAPL
Trigger: CAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAATCCTTGTAGCGCTCTaGGGTTGGGCCAGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGILVAL*GWASWL
Trigger: GAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGAT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTATCCTTGTAGCGCTCTaGGGTTGGGCCAGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFILVAL*GWASWL
Trigger: GAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGAT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCAGCCGCAAGAGACTGTaGGCTGCTCTGTACACATCA +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASRKRL*AALYTS
Trigger: TGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCT...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 5 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACCCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTGCACTGGATCATCTTaGTTCCACCCCCAAACCAGA +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQCTGSS*FHPQTR
Trigger: TCTGGTTTGGGGGTGGAACAAAGATGATCCAGTGCA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: DKRVRISAWRGDWALGFLTFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTTCCCCAAGCTCCATTaGCATAAACTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPFPKLH*HKLSLM
Trigger: CATCAGAGACAGTTTATGCAAATGGAGCTTGGGGAA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAGGGAAGGTGTGAGGTaGCCGCCATGCCTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLREGVR*PPCLAE
Trigger: CTCTGCCAGGCATGGCGGCAACCTCACACCTTCCCT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAGGGAAGGTGTGAGGTaGCCGCCATGCCTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSREGVR*PPCLAE
Trigger: CTCTGCCAGGCATGGCGGCAACCTCACACCTTCCCT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCTGGGTGCCGACCTGTaGGGACCCAAATTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLGADL*GPKFLV
Trigger: CACAAGGAATTTGGGTCCCAACAGGTCGGCACCCAG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGAGACTGCGTCCAGGTaGCTGGACTACACCGGGGGC +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVETASR*LDYTGG
Trigger: GCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCTC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATACAAAGCCCCGGGCTaGACCTTAGTGGAAAGCCGA +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGYKAPG*TLVESR
Trigger: TCGGCTTTCCACTAAGGTCAAGCCCGGGGCTTTGTA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGGCCAGTTGGCTCCATaGCTGAATCAGTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFGQLAP*LNQSAA
Trigger: AGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGCCAGTTGGCTCCATaGCTGAATCAGTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGQLAP*LNQSAA
Trigger: AGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACATCCTTGTAGCGCTCTaGGGTTGGGCCAGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDILVAL*GWASWL
Trigger: GAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGAT...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCGCCCCACCAGCCCATaGATCAGCGAGGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLRPTSP*ISEDFP
Trigger: GGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGCG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCGCCCCACCAGCCCATaGATCAGCGAGGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSRPTSP*ISEDFP
Trigger: GGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGCG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTGCACTGGATCATCTTaGTTCCACCCCCAAACCAGA +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNCTGSS*FHPQTR
Trigger: TCTGGTTTGGGGGTGGAACAAAGATGATCCAGTGCA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTGCACTGGATCATCTTaGTTCCACCCCCAAACCAGA +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGACTGSS*FHPQTR
Trigger: TCTGGTTTGGGGGTGGAACAAAGATGATCCAGTGCA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGACAGGATGTATACTCTaGACTTGTCTCTCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: DKRVRISAWRGDWALGFLTGCIL*TCLSPL
Trigger: TAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCCCCACACCTATATGTaGATGATGCCCAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQPHTYM*MMPKSL
Trigger: CAGAGATTTGGGCATCATCAACATATAGGTGTGGGG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCAGGGAAGGTGTGAGGTaGCCGCCATGCCTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVREGVR*PPCLAE
Trigger: CTCTGCCAGGCATGGCGGCAACCTCACACCTTCCCT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGAGACTGCGTCCAGGTaGCTGGACTACACCGGGGGC +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQETASR*LDYTGG
Trigger: GCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCTC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNTFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGCCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGAAGTTGTCATGTTTCTaGACCTTTGCTGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: DKRVRISAWRGDWALGFLKLSCF*TFAVSS
Trigger: AGAGGAGACAGCAAAGGTCAAGAAACATGACAACTT...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCTGGGTGCCGACCTGTaGGGACCCAAATTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSLGADL*GPKFLV
Trigger: CACAAGGAATTTGGGTCCCAACAGGTCGGCACCCAG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCCGTGTCATCACTACCTaGCGCTCCCGGGAGAACCTA +
Preference number: 5 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSRVITT*RSRENL
Trigger: TAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACACG...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCGTGTCATCACTACCTaGCGCTCCCGGGAGAACCTA +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLRVITT*RSRENL
Trigger: TAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACACG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGCAGTCGGTATCGATTaGGGTCGTAGCCTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSAVGID*GRSLVD
Trigger: GTCCACGAGGCTACGACCCAAATCGATACCGACTGC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGGGCCAGATCCACCTaGTTCAAAACCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGARST*FKTSTR
Trigger: CCTGGTGCTGGTTTTGAACAAGGTGGATCTGGCCCC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGGGCCAGATCCACCTaGTTCAAAACCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGARST*FKTSTR
Trigger: CCTGGTGCTGGTTTTGAACAAGGTGGATCTGGCCCC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTGTAGCGCTCTTGGGTaGGGCCAGTTGGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSCSALG*GQLAPL
Trigger: CAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTGTAGCGCTCTTGGGTaGGGCCAGTTGGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLCSALG*GQLAPL
Trigger: CAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCATCCTTGTAGCGCTCTaGGGTTGGGCCAGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSILVAL*GWASWL
Trigger: GAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGAT...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGETFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: DKRVRISAWRGDWALGFLDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TTCATTTTCCCCGCCACCACCCATCAGCAGCGTTCCACGCCGCCCTTCCTTCCTTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 5 (lower is better)
Translates to: FIFPATTHQQRSTPPFLPSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...AGGAAGGAAGGGCGGCGTGGAACGCTGCTGATGGGTGGTGGCGGGGAAAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTTCCCCAAGCTCCATTaGCATAAACTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNFPKLH*HKLSLM
Trigger: CATCAGAGACAGTTTATGCAAATGGAGCTTGGGGAA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGCCCCACACCTATATGTaGATGATGCCCAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEPHTYM*MMPKSL
Trigger: CAGAGATTTGGGCATCATCAACATATAGGTGTGGGG...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACTGGGCCCTTGGTTTCCTGTCACTGCCAAACATTTaGAAAATTCTCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: DKRVRISAWRGDWALGFLSLPNI*KILSSP
Trigger: AGGTGAGGAGAGAATTTTCAAAATGTTTGGCAGTGA...CAGGAAACCAAGGGCCCAGTCTCCCCTCCACGCTGAAATACGCACCCTCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp GATAGTCTTGGAAGCTCCGTTCCTCTTGGCTCATTAGTTGCTCCTTaGACATCTCATAGCTCCAAGGAGGACGTCGAGGAAAGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: DSLGSSVPLGSLVAP*TSHSSKEDVEESPE
Trigger: TTCTGGACTTTCCTCGACGTCCTCCTTGGAGCTATGAGATGTCCAAGGAGCAACTAATGAGCCAAGAGGAACGGAGCTTCCAAGACTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGAGACTGCGTCCAGGTaGCTGGACTACACCGGGGGC +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDETASR*LDYTGG
Trigger: GCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCTC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCTACAAAGCCCCGGGCTaGACCTTAGTGGAAAGCCGA +
Preference number: 5 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSYKAPG*TLVESR
Trigger: TCGGCTTTCCACTAAGGTCAAGCCCGGGGCTTTGTA...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCCGTGTCATCACTACCTaGCGCTCCCGGGAGAACCTA +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVRVITT*RSRENL
Trigger: TAGGTTCTCCCGGGAGCGCAAGGTAGTGATGACACG...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGCAGTCGGTATCGATTaGGGTCGTAGCCTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVAVGID*GRSLVD
Trigger: GTCCACGAGGCTACGACCCAAATCGATACCGACTGC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGCCAGTTGGCTCCATaGCTGAATCAGTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGQLAP*LNQSAA
Trigger: AGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCATCCTTGTAGCGCTCTaGGGTTGGGCCAGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVILVAL*GWASWL
Trigger: GAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGAT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCGCCCCACCAGCCCATaGATCAGCGAGGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFRPTSP*ISEDFP
Trigger: GGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGCG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTACCCTGGAGCCGAGGTaGGGGTCTCCTCATCCCCTT +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFTLEPR*GSPHPL
Trigger: AAGGGGATGAGGAGACCCCAACCTCGGCTCCAGGGT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFTFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CGCTTTTCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: RFSSKLFLNPLTSGASDSGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...GGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGAAAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTATTCCTACCCTCTATaGCTTGAGAGTAGGATATTG +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQYSYPL*LESRIL
Trigger: CAATATCCTACTCTCAAGCAATAGAGGGTAGGAATA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGACAGGATGTATACTCTaGACTTGTCTCTCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGETGCIL*TCLSPL
Trigger: TAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACCCCACACCTATATGTaGATGATGCCCAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGPHTYM*MMPKSL
Trigger: CAGAGATTTGGGCATCATCAACATATAGGTGTGGGG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS GCA 90 bp TTCCTTGTGGGAACGATGATAAGGAGCAGGTTTACAGATCATAAGTaGAAAAGCGGGCGAGAAGGGAAACCCAAGCGGGACAAGGACTTT +
Preference number: 5 (lower is better)
Translates to: FLVGTMIRSRFTDHK*KSGREGKPKRDKDF
Trigger: AAAGTCCTTGTCCCGCTTGGGTTTCCCTTCTCGCCCGCTTTTGCACTTATGATCTGTAAACCTGCTCCTTATCATCGTTCCCACAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCAAAGGGCACGAAGTaGTGCCTGCAGCTGTTACCA +
Preference number: 5 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSKGTK*CLQLLP
Trigger: TGGTAACAGCTGCAGGCACAACTTCGTGCCCTTTGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACTGGGTGCCGACCTGTaGGGACCCAAATTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLGADL*GPKFLV
Trigger: CACAAGGAATTTGGGTCCCAACAGGTCGGCACCCAG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGGAGCGCAGCCCATCTaGAAGCCCTCTCTTCCGCTC +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDGAQPI*KPSLPL
Trigger: GAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCGCCCCACCAGCCCATaGATCAGCGAGGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDRPTSP*ISEDFP
Trigger: GGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGCG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTAGCCGCAAGAGACTGTaGGCTGCTCTGTACACATCA +
Preference number: 5 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSRKRL*AALYTS
Trigger: TGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATACCCTGGAGCCGAGGTaGGGGTCTCCTCATCCCCTT +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDTLEPR*GSPHPL
Trigger: AAGGGGATGAGGAGACCCCAACCTCGGCTCCAGGGT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGATTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGLRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCTGAAGGTGGGGTTTaGATCATGGCCAGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPEGGV*IMARLQ
Trigger: TTGAAGCCTGGCCATGATCAAAACCCCACCTTCAGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGACCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGAAGTTGTCATGTTTCTaGACCTTTGCTGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEKLSCF*TFAVSS
Trigger: AGAGGAGACAGCAAAGGTCAAGAAACATGACAACTT...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTCCTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGTACAGTCTTCCAAAGTaGTCATGTTTCTTGACCTTT +
Preference number: 5 (lower is better)
Translates to: LLYGATTTPQDPVPPFSQYSLPK*SCFLTF
Trigger: AAAGGTCAAGAAACATGACAACTTTGGAAGACTGTA...CTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAACAGGATGTATACTCTaGACTTGTCTCTCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGTGCIL*TCLSPL
Trigger: TAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTACAGGATGTATACTCTaGACTTGTCTCTCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFTGCIL*TCLSPL
Trigger: TAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGT...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACCCCCACACCTATATGTaGATGATGCCCAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDPHTYM*MMPKSL
Trigger: CAGAGATTTGGGCATCATCAACATATAGGTGTGGGG...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCTGTCCCCCACTCCTTCCTGATCAGTATCCCAATGTCCCTCCTATATGGAGCCTCACTGCCAAACATTTaGAAAATTCTCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: PVPHSFLISIPMSLLYGASLPNI*KILSSP
Trigger: AGGTGAGGAGAGAATTTTCAAAATGTTTGGCAGTGA...GGCTCCATATAGGAGGGACATTGGGATACTGATCAGGAAGGAGTGGGGGACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 90 bp GCCCTTCCACTTACCAGCTTTGTGATGTCAGGGCAACTAACTTTCTaGGCCTCTGTTTCTTCATTTTACAGTGTGGACACCTCCCTACCT +
Preference number: 5 (lower is better)
Translates to: ALPLTSFVMSGQLTF*ASVSSFYSVDTSLP
Trigger: AGGTAGGGAGGTGTCCACACTGTAAAATGAAGAAACAGAGGCTCAGAAAGTTAGTTGCCCTGACATCACAAAGCTGGTAAGTGGAAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000464231.1
ENST00000467241.1
ENST00000467550.1
ENST00000479883.1
ENST00000483987.1
ENST00000492408.1
ENST00000495838.1
ENST00000496960.1
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTCAAAGGGCACGAAGTaGTGCCTGCAGCTGTTACCA +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVSKGTK*CLQLLP
Trigger: TGGTAACAGCTGCAGGCACAACTTCGTGCCCTTTGA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATACAAAGCCCCGGGCTaGACCTTAGTGGAAAGCCGA +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQYKAPG*TLVESR
Trigger: TCGGCTTTCCACTAAGGTCAAGCCCGGGGCTTTGTA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAGGCCAGTTGGCTCCATaGCTGAATCAGTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQGQLAP*LNQSAA
Trigger: AGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCC...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAACTTGGGTTGGGCCAGTaGGCTCCATTGCTGAATCAG +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLGLGQ*APLLNQ
Trigger: CTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAG...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTGTAGCGCTCTTGGGTaGGGCCAGTTGGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFCSALG*GQLAPL
Trigger: CAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDLRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 5 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAGGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: HIVDMTQTRGCVFQRGGEDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...CTCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTGGGGGTGTCAGGAGTaGCCTCCTGCCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDWGCQE*PPARSS
Trigger: TGAAGACCTGGCAGGAGGCAACTCCTGACACCCCCA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTATATGGAGCCACCACTACCCCACAGGATCCTGTACCACCCTTCTCCCAGAACTTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTC +
Preference number: 5 (lower is better)
Translates to: LYGATTTPQDPVPPFSQNLPYSI*VIVPEL
Trigger: GAGTTCTGGGACAATAACCAAAATTGAATAAGGCAA...GTTCTGGGAGAAGGGTGGTACAGGATCCTGTGGGGTAGTGGTGGCTCCATATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCACATAGTAGACATGACCCAGACAAGAGGGTGCGTATTTCAGCGTGGAGGGGAAAGTTGTCATGTTTCTaGACCTTTGCTGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SHSRHDPDKRVRISAWRGKLSCF*TFAVSS
Trigger: AGAGGAGACAGCAAAGGTCAAGAAACATGACAACTT...TCCCCTCCACGCTGAAATACGCACCCTCTTGTCTGGGTCATGTCTACTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 90 bp GCTCAGAAATTAAGGAAATGGTATTGCAGAATACAAATCACGCTCTaGGCTGCCAGGGTTAAATCCTGGCCCTTCCACTTACCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: AQKLRKWYCRIQITL*AARVKSWPFHLPAL
Trigger: CAAAGCTGGTAAGTGGAAGGGCCAGGATTTAACCCTGGCAGCCCAGAGCGTGATTTGTATTCTGCAATACCATTTCCTTAATTTCTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000464231.1
ENST00000467241.1
ENST00000467550.1
ENST00000479883.1
ENST00000483987.1
ENST00000492408.1
ENST00000495838.1
ENST00000496960.1
CDS CCA 90 bp AGAGTAGCAAAATCACTTACTCAAGACCTCACAGCTGAGAAGAGGTaGAATTTAACTCAGGCTGTCATGATCCTTCCACTGCAGCAGACG +
Preference number: 5 (lower is better)
Translates to: RVAKSLTQDLTAEKR*NLTQAVMILPLQQT
Trigger: CGTCTGCTGCAGTGGAAGGATCATGACAGCCTGAGTTAAATTCCACCTCTTCTCAGCTGTGAGGTCTTGAGTAAGTGATTTTGCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGCAGTCGGTATCGATTaGGGTCGTAGCCTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDAVGID*GRSLVD
Trigger: GTCCACGAGGCTACGACCCAAATCGATACCGACTGC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATATCCTTGTAGCGCTCTaGGGTTGGGCCAGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDILVAL*GWASWL
Trigger: GAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGAT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAGCCGCAAGAGACTGTaGGCTGCTCTGTACACATCA +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSRKRL*AALYTS
Trigger: TGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCATGAGCCCCCAGGATTaGGAGAACATCATTCACCCT +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVMSPQD*ENIIHP
Trigger: AGGGTGAATGATGTTCTCCAAATCCTGGGGGCTCAT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGTCCAACTACACTTTTaGCTATCATCCAATACAGAC +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFVQLHF*LSSNTD
Trigger: GTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGAC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTGACCTTTTCTCTTTCTaGTCTAGCACATTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFDLFSF*SSTFWE
Trigger: TTCCCAAAATGTGCTAGACAAGAAAGAGAAAAGGTC...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCCTCAGGCACTGGTGTaGGGGCCCTATTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDPQALV*GPYSSS
Trigger: TGAGGATGAATAGGGCCCCAACACCAGTGCCTGAGG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCCCACACCTATATGTaGATGATGCCCAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPHTYM*MMPKSL
Trigger: CAGAGATTTGGGCATCATCAACATATAGGTGTGGGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCTTGGGTTGGGCCAGTaGGCTCCATTGCTGAATCAG +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDLGLGQ*APLLNQ
Trigger: CTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTAGCCGCAAGAGACTGTaGGCTGCTCTGTACACATCA +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSRKRL*AALYTS
Trigger: TGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCT...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACGTCCAACTACACTTTTaGCTATCATCCAATACAGAC +
Preference number: 5 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDVQLHF*LSSNTD
Trigger: GTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGAC...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGGGGAGACTGGGCCCTaGGTTTCCTGTGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDGETGP*VSCVFV
Trigger: TACAAAGACACAGGAAACCAAGGGCCCAGTCTCCCC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CTGGTTCTGTGCCCGCCCCTATGTACCTCAAATACTCGTAGCTGCCAAGCTTTTTTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTC +
Preference number: 5 (lower is better)
Translates to: LVLCPPLCTSNTRSCQAFLPYSI*VIVPEL
Trigger: GAGTTCTGGGACAATAACCAAAATTGAATAAGGCAA...AAAAGCTTGGCAGCTACGAGTATTTGAGGTACATAGGGGCGGGCACAGAACCAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTCCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 5 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGCCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCAAAGGGCACGAAGTaGTGCCTGCAGCTGTTACCA +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDSKGTK*CLQLLP
Trigger: TGGTAACAGCTGCAGGCACAACTTCGTGCCCTTTGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAACTTTCCTTTGCTCCTaGGTTAACAGGGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQTFLCS*VNRVCL
Trigger: CAGACAGACCCTGTTAACCAAGGAGCAAAGGAAAGT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGAAGTTGTCATGTTTCTaGACCTTTGCTGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLKLSCF*TFAVSS
Trigger: AGAGGAGACAGCAAAGGTCAAGAAACATGACAACTT...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CAGACCCATGACCCACCCAGTTGCCAAGTCAGAAACAGGATGTATACTCTTGACTACAGTCTTCCAAAGTaGTCATGTTTCTTGACCTTT +
Preference number: 5 (lower is better)
Translates to: QTHDPPSCQVRNRMYTLDYSLPK*SCFLTF
Trigger: AAAGGTCAAGAAACATGACAACTTTGGAAGACTGTA...GTCAAGAGTATACATCCTGTTTCTGACTTGGCAACTGGGTGGGTCATGGGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCACAGGATGTATACTCTaGACTTGTCTCTCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVTGCIL*TCLSPL
Trigger: TAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGT...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATTAAGAGACATCAGCTaGGGACACAGTTCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQLRDIS*GHSSSL
Trigger: AAGAGAGGAACTGTGTCCCAAGCTGATGTCTCTTAA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTGCACTGGATCATCTTaGTTCCACCCCCAAACCAGA +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDCTGSS*FHPQTR
Trigger: TCTGGTTTGGGGGTGGAACAAAGATGATCCAGTGCA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATTCCCCAAGCTCCATTaGCATAAACTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQFPKLH*HKLSLM
Trigger: CATCAGAGACAGTTTATGCAAATGGAGCTTGGGGAA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCCCCACACCTATATGTaGATGATGCCCAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFPHTYM*MMPKSL
Trigger: CAGAGATTTGGGCATCATCAACATATAGGTGTGGGG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp TCCTCCAAATTATTCCTTAACCCTCTGACATCTGGGGCTTCTGATTCCACCTCTTCACTGCCAAACATTTaGAAAATTCTCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: SSKLFLNPLTSGASDSTSSLPNI*KILSSP
Trigger: AGGTGAGGAGAGAATTTTCAAAATGTTTGGCAGTGA...AGAGGTGGAATCAGAAGCCCCAGATGTCAGAGGGTTAAGGAATAATTTGGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTACATCCTTATATGCTaGGTGCTCAGCACAGGTCAA +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFYILIC*VLSTGQ
Trigger: TTGACCTGTGCTGAGCACCAAGCATATAAGGATGTA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCGTCCAACTACACTTTTaGCTATCATCCAATACAGAC +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVVQLHF*LSSNTD
Trigger: GTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGAC...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGTCTGGTACTTCTCACTCCATCTAGTGGGCAACCTGTCCAACTACACTTTTTGTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 5 (lower is better)
Translates to: SLVLLTPSSGQPVQLHFLSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...CAAAAAGTGTAGTTGGACAGGTTGCCCACTAGATGGAGTGAGAAGTACCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTCCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTATTCCTACCCTCTATaGCTTGAGAGTAGGATATTG +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVYSYPL*LESRIL
Trigger: CAATATCCTACTCTCAAGCAATAGAGGGTAGGAATA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAAAAGTTGTCATGTTTCTaGACCTTTGCTGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQKLSCF*TFAVSS
Trigger: AGAGGAGACAGCAAAGGTCAAGAAACATGACAACTT...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTTCCCCAAGCTCCATTaGCATAAACTGTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFFPKLH*HKLSLM
Trigger: CATCAGAGACAGTTTATGCAAATGGAGCTTGGGGAA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp ATTTCTCCTTTGCACCCTCTGCCTCTGAACAAGTTACAGTCTTCCAAAGTTGTCTTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTC +
Preference number: 5 (lower is better)
Translates to: ISPLHPLPLNKLQSSKVVLPYSI*VIVPEL
Trigger: GAGTTCTGGGACAATAACCAAAATTGAATAAGGCAA...GACAACTTTGGAAGACTGTAACTTGTTCAGAGGCAGAGGGTGCAAAGGAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATCCTACCCTCTATTGCTaGAGAGTAGGATATTGCCTT +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDPTLYC*RVGYCL
Trigger: AAGGCAATATCCTACTCTCAAGCAATAGAGGGTAGG...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATACAGGATGTATACTCTaGACTTGTCTCTCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDTGCIL*TCLSPL
Trigger: TAGGGGAGAGAGACAAGTCAAGAGTATACATCCTGT...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATCACTGCCAAACATTTaGAAAATTCTCTCCTCACCT +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSLPNI*KILSSP
Trigger: AGGTGAGGAGAGAATTTTCAAAATGTTTGGCAGTGA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTGTCCAACTACACTTTTaGCTATCATCCAATACAGAC +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFVQLHF*LSSNTD
Trigger: GTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGAC...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp CCATTTCTATCTCACTTACCACTTGGAAGTGACTGGCAGGTAGTAATTGCTCAATACAGTCTTCCAAAGTaGTCATGTTTCTTGACCTTT +
Preference number: 5 (lower is better)
Translates to: PFLSHLPLGSDWQVVIAQYSLPK*SCFLTF
Trigger: AAAGGTCAAGAAACATGACAACTTTGGAAGACTGTA...TTGAGCAATTACTACCTGCCAGTCACTTCCAAGTGGTAAGTGAGATAGAAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATGTCCAACTACACTTTTaGCTATCATCCAATACAGAC +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDVQLHF*LSSNTD
Trigger: GTCTGTATTGGATGATAGCAAAAAGTGTAGTTGGAC...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp AGGTGGATTTTTCTCTCAGCTGGGACCTTTTCTCTTTCTTGTCTAGCACATTTTTTGCCTTATTCAATTTaGGTTATTGTCCCAGAACTC +
Preference number: 5 (lower is better)
Translates to: RWIFLSAGTFSLSCLAHFLPYSI*VIVPEL
Trigger: GAGTTCTGGGACAATAACCAAAATTGAATAAGGCAA...AAAATGTGCTAGACAAGAAAGAGAAAAGGTCCCAGCTGAGAGAAAAATCCACCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTATTCCTACCCTCTATaGCTTGAGAGTAGGATATTG +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDYSYPL*LESRIL
Trigger: CAATATCCTACTCTCAAGCAATAGAGGGTAGGAATA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTCAGTTCTTTTCCTGTaGCTATTATCCTATAGAGTC +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDSVLFL*LLSYRV
Trigger: GACTCTATAGGATAATAGCAACAGGAAAAGAACTGA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS-3UTR CAA 90 bp GAGAGTAGGATATTGCCTTATTCAATTTTGGTTATTGTCCCAGAACTCAGGGATTACAGTCTTCCAAAGTaGTCATGTTTCTTGACCTTT +
Preference number: 5 (lower is better)
Translates to: ESRILPYSILVIVPELRDYSLPK*SCFLTF
Trigger: AAAGGTCAAGAAACATGACAACTTTGGAAGACTGTA...ATCCCTGAGTTCTGGGACAATAACCAAAATTGAATAAGGCAATATCCTACTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 72 bp GGGGCCCGGGACCCTAGAGGAGGCGGGGCTAGCAGGTaGCGTCAGCGGGCGGGCCCGACAGAATTACCGCCG +
Preference number: 6 (lower is better)
Translates to: GARDPRGGGASR*RQRAGPTELPP
Trigger: CGGCGGTAATTCTGTCGGGCCCGCCCGCTGACGTCACCTGCTAGCCCCGCCTCCTCTAGGGTCCCGGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 72 bp GAGAGGGCGCCCCGGCGGCGAGGAAGGAGGCGCGCGTaGGAGGACCAGGCTAACTCCGTCACGGACGCTACC +
Preference number: 6 (lower is better)
Translates to: ERAPRRRGRRRA*EDQANSVTDAT
Trigger: GGTAGCGTCCGTGACGGAGTTAGCCTGGTCCTCCCACGCGCGCCTCCTTCCTCGCCGCCGGGGCGCCCTCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 72 bp AGGCGAGAGGATGATGCGGGGTGGGCTACTGGCACGTaGGAGCCAGTGGCACCGAGAGGGCGCCCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RREDDAGWATGT*EPVAPRGRPGG
Trigger: GCCGCCGGGGCGCCCTCTCGGTGCCACTGGCTCTCACGTGCCAGTAGCCCACCCCGCATCATCCTCTCGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 72 bp CTCGCCGCTCCCGGCTCCCGCTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAAGCCCTGCGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: LAAPGSRCGCWN*SAAHLEALRGG
Trigger: CCCTCCCCGCAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000416639.1
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000443235.1
ENST00000450423.1
ENST00000458592.1
CDS CCA 72 bp ATGATGCGGGGTGGGCTACTGGCACGTGAGAGCCAGTaGCACCGAGAGGGCGCCCCGGCGGCGAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: MMRGGLLARESQ*HREGAPAARKE
Trigger: CTCCTTCCTCGCCGCCGGGGCGCCCTCTCGGTGCCACTGGCTCTCACGTGCCAGTAGCCCACCCCGCATCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CAA 72 bp CCCGCTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTaGAAGCCCTGCGGGGAGGGGCCGGTGACGCCAGTG +
Preference number: 6 (lower is better)
Translates to: PAAAVGTGAQPI*KPCGEGPVTPV
Trigger: CACTGGCGTCACCGGCCCCTCCCCGCAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000416639.1
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000443235.1
ENST00000450423.1
ENST00000458592.1
CDS CCA 72 bp GTTCCTCTCGCCGCTCCCGGCTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCATCTTGAAGCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: VPLAAPGSRCGC*NWSAAHLEALR
Trigger: CCGCAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAGAGGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000416639.1
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000443235.1
ENST00000450423.1
ENST00000458592.1
CDS CCA 72 bp CTCGCCGCTCCCGGCTCCCGCTGCGGCTGTTGGAACTaGAGCGCAGCCCATCTTGAAGCCCTCTCTTCCGCT +
Preference number: 6 (lower is better)
Translates to: LAAPGSRCGCWN*SAAHLEALSSA
Trigger: AGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 72 bp GTTCCTCTCGCCGCTCCCGGCTCCCGCTGCGGCTGTTaGAACTGGAGCGCAGCCCATCTTGAAGCCCTCTCT +
Preference number: 6 (lower is better)
Translates to: VPLAAPGSRCGC*NWSAAHLEALS
Trigger: AGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAGAGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 72 bp CACCCAGCAGGGCATAAGGGTTTCGGCCAGCCAGGCTaGACCCTGGAGCCGAGGTTGGGGTCTCCTCATCCC +
Preference number: 6 (lower is better)
Translates to: HPAGHKGFGQPG*TLEPRLGSPHP
Trigger: GGGATGAGGAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCTGGCCGAAACCCTTATGCCCTGCTGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS GCA 72 bp TGTCGGTCTGTTCCTCTCGCCGCTCCCGGCTCCCGCTaGGGCTGTTGGAACTGGAGCGCAGCCCATCTTGAA +
Preference number: 6 (lower is better)
Translates to: CRSVPLAAPGSR*GCWNWSAAHLE
Trigger: TTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAGCGGCGAGAGGAACAGACCGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS CCA 72 bp CAGGGCATAAGGGTTTCGGCCAGCCAGGCTGGACCCTaGAGCCGAGGTTGGGGTCTCCTCATCCCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: QGIRVSASQAGP*SRGWGLLIPFS
Trigger: GGAGAAGGGGATGAGGAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCTGGCCGAAACCCTTATGCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 72 bp CCCAGACACCCTATTTGGGACCCTCCCGGATGTGCGTaGGGGGAGTCACTCCTTCAGGGAGCAGTGGGGACG +
Preference number: 6 (lower is better)
Translates to: PRHPIWDPPGCA*GESLLQGAVGT
Trigger: CGTCCCCACTGCTCCCTGAAGGAGTGACTCCCCCCACGCACATCCGGGAGGGTCCCAAATAGGGTGTCTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416639.1
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000443235.1
ENST00000450423.1
ENST00000458592.1
CDS GCA 72 bp TTCCCCACAGTGATGGCTTCACAGGCTCTCAGCAACTaGTCTGGCCCCAGGGCCCGAGTCCATCCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: FPTVMASQALSN*SGPRARVHPLP
Trigger: GGGGAGAGGATGGACTCGGGCCCTGGGGCCAGAGCAGTTGCTGAGAGCCTGTGAAGCCATCACTGTGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CAA 90 bp CTCCCGGCTCCCGCTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTaGAAGCCCTCTCTTCCGCTCCCGTTTGTCCTGCAACTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: LPAPAAAVGTGAQPI*KPSLPLPFVLQLLL
Trigger: AAGAAGCAGTTGCAGGACAAACGGGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGGAGCCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 72 bp CCGCTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTTaGAGCCCTCTCTTCCGCTCCCGTTTGTCCTGCAAC +
Preference number: 6 (lower is better)
Translates to: PLRLLELERSPS*SPLFRSRLSCN
Trigger: GTTGCAGGACAAACGGGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS GCA 72 bp AAAGCCCCGGGCTTGACCTTAGTGGAAAGCCGAGACTaGGTCCAGGTTGCTGGACTACACCGGGGGCACGGT +
Preference number: 6 (lower is better)
Translates to: KAPGLTLVESRD*VQVAGLHRGHG
Trigger: ACCGTGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCACTAAGGTCAAGCCCGGGGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS GCA 72 bp GCGGCCGTCCACTGCCAGCCGCAAGAGACTGTTGGCTaGTCTGTACACATCATTCCGAGCCGCCTTGGCTGT +
Preference number: 6 (lower is better)
Translates to: AAVHCQPQETVG*SVHIIPSRLGC
Trigger: ACAGCCAAGGCGGCTCGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCTGGCAGTGGACGGCCGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS CAA 72 bp CCCGCTGCGGCTGTTGGAACTGGAGCGCAGCCCATCTaGAAGCCCTCTCTTCCGCTCCCGTTTGTCCTGCAA +
Preference number: 6 (lower is better)
Translates to: PAAAVGTGAQPI*KPSLPLPFVLQ
Trigger: TTGCAGGACAAACGGGAGCGGAAGAGAGGGCTTCAAGATGGGCTGCGCTCCAGTTCCAACAGCCGCAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CAA 72 bp CTGAGGCGGCCGTCCACTGCCAGCCGCAAGAGACTGTaGGCTGCTCTGTACACATCATTCCGAGCCGCCTTG +
Preference number: 6 (lower is better)
Translates to: LRRPSTASRKRL*AALYTSFRAAL
Trigger: CAAGGCGGCTCGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS GCA 72 bp TGGGGGATGAAAACACAGGCTGAGGCGGCCGTCCACTaGCAGCCGCAAGAGACTGTTGGCTGCTCTGTACAC +
Preference number: 6 (lower is better)
Translates to: WGMKTQAEAAVH*QPQETVGCSVH
Trigger: GTGTACAGAGCAGCCAACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTCAGCCTGTGTTTTCATCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS CCA 72 bp CCACCGCCACTGGCAGAGATCACCCCTCAGACACCCTaGGGCCTAATGAGACCTGATCGCCCTCTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PPPLAEITPQTP*GLMRPDRPLSS
Trigger: AGAAGAGAGAGGGCGATCAGGTCTCATTAGGCCCCAGGGTGTCTGAGGGGTGATCTCTGCCAGTGGCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CAA 72 bp CATGATCCTTCCACTGCAGCAGACGCCTCTTCTGCCTaGCCCACCGCCACTGGCAGAGATCACCCCTCAGAC +
Preference number: 6 (lower is better)
Translates to: HDPSTAADASSA*PTATGRDHPSD
Trigger: GTCTGAGGGGTGATCTCTGCCAGTGGCGGTGGGCAAGGCAGAAGAGGCGTCTGCTGCAGTGGAAGGATCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CAA 90 bp CCCGGGGTTCTGGAGACACTCACGACTTTCCGCCCCACCAGCCCATaGATCAGCGAGGACTTTCCCACATTAGGGAAACCCACACAGCCG +
Preference number: 6 (lower is better)
Translates to: PGVLETLTTFRPTSP*ISEDFPTLGKPTQP
Trigger: CGGCTGTGTGGGTTTCCCTAATGTGGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGCGGAAAGTCGTGAGTGTCTCCAGAACCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS CAA 90 bp AAACACAGGCTGAGGCGGCCGTCCACTGCCAGCCGCAAGAGACTGTaGGCTGCTCTGTACACATCATTCCGAGCCGCCTTGGCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: KHRLRRPSTASRKRL*AALYTSFRAALAVL
Trigger: CAAGACAGCCAAGGCGGCTCGGAATGATGTGTACAGAGCAGCCAACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTCAGCCTGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS TCA 72 bp ACACCTCCCGGATGTCCAGCTCCAACAACTCAGCACTaGCCGGCTGTAGAACTTGCTCCCGGGCTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: TPPGCPAPTTQH*PAVELAPGLLS
Trigger: AGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGGAGCTGGACATCCGGGAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS TCA 72 bp TCTGTTCACTGTAGCCTGGGGGATGAAAACACAGGCTaGGGCGGCCGTCCACTGCCAGCCGCAAGAGACTGT +
Preference number: 6 (lower is better)
Translates to: SVHCSLGDENTG*GGRPLPAARDC
Trigger: ACAGTCTCTTGCGGCTGGCAGTGGACGGCCGCCTCAGCCTGTGTTTTCATCCCCCAGGCTACAGTGAACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS GCA 72 bp CATAGTAACCGAGGACCGGATGTGGCGATCTTACGGTaGGACAGTCCTCTTCTCAGGCCCTCTGGCCCGAGA +
Preference number: 6 (lower is better)
Translates to: HSNRGPDVAILR*DSPLLRPSGPR
Trigger: TCTCGGGCCAGAGGGCCTGAGAAGAGGACTGTCGCACCGTAAGATCGCCACATCCGGTCCTCGGTTACTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS GCA 72 bp GTTGGGCCAGTTGGCTCCATTGCTGAATCAGTCTGCTaGTCCACCAGGACTGCTGGGCCATCCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: VGPVGSIAESVC*STRTAGPSSSS
Trigger: GGAAGAGGAGGATGGCCCAGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS GCA 72 bp TGGGTTGGGCCAGTTGGCTCCATTGCTGAATCAGTCTaGTGCTCCACCAGGACTGCTGGGCCATCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: WVGPVGSIAESV*CSTRTAGPSSS
Trigger: AGAGGAGGATGGCCCAGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCCCAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS GCA 72 bp ATGATCCTTCCACTGCAGCAGACGCCTCTTCTGCCTTaGCCACCGCCACTGGCAGAGATCACCCCTCAGACA +
Preference number: 6 (lower is better)
Translates to: MILPLQQTPLLP*PPPLAEITPQT
Trigger: TGTCTGAGGGGTGATCTCTGCCAGTGGCGGTGGGCAAGGCAGAAGAGGCGTCTGCTGCAGTGGAAGGATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CCA 72 bp GACCTTAGTGGAAAGCCGAGACTGCGTCCAGGTTGCTaGACTACACCGGGGGCACGGTCAGAGGTCTTTAGG +
Preference number: 6 (lower is better)
Translates to: DLSGKPRLRPGC*TTPGARSEVFR
Trigger: CCTAAAGACCTCTGACCGTGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCACTAAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CAA 90 bp AGAGGGGGCGTGGACACGCTGAGGCTATACTACAAAGCCCCGGGCTaGACCTTAGTGGAAAGCCGAGACTGCGTCCAGGTTGCTGGACTA +
Preference number: 6 (lower is better)
Translates to: RGGVDTLRLYYKAPG*TLVESRDCVQVAGL
Trigger: TAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCACTAAGGTCAAGCCCGGGGCTTTGTAGTATAGCCTCAGCGTGTCCACGCCCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CAA 90 bp CGATGGTCACCACCCCATCCTTGTAGCGCTCTTGGGTTGGGCCAGTaGGCTCCATTGCTGAATCAGTCTGCTGCTCCACCAGGACTGCTG +
Preference number: 6 (lower is better)
Translates to: RWSPPHPCSALGLGQ*APLLNQSAAPPGLL
Trigger: CAGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGATGGGGTGGTGACCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CAA 90 bp CCACACAGCCGATGGTCACCACCCCATCCTTGTAGCGCTCTTGGGTaGGGCCAGTTGGCTCCATTGCTGAATCAGTCTGCTGCTCCACCA +
Preference number: 6 (lower is better)
Translates to: PHSRWSPPHPCSALG*GQLAPLLNQSAAPP
Trigger: TGGTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGATGGGGTGGTGACCATCGGCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CAA 90 bp CCCGGGGTTCTGGAGACACTCACGACTTTCCGCCCCACCAGCCCATaGATCAGCGAGGACTTTCCCACATTAGGGAAACCTGAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: PGVLETLTTFRPTSP*ISEDFPTLGKPEEG
Trigger: GCCTTCCTCAGGTTTCCCTAATGTGGGAAAGTCCTCGCTGATCAATGGGCTGGTGGGGCGGAAAGTCGTGAGTGTCTCCAGAACCCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000464231.1
ENST00000467241.1
ENST00000467550.1
ENST00000479883.1
ENST00000483987.1
ENST00000492408.1
ENST00000495838.1
ENST00000496960.1
CDS GCA 72 bp CTTGACCTTAGTGGAAAGCCGAGACTGCGTCCAGGTTaGTGGACTACACCGGGGGCACGGTCAGAGGTCTTT +
Preference number: 6 (lower is better)
Translates to: LDLSGKPRLRPG*WTTPGARSEVF
Trigger: AAAGACCTCTGACCGTGCCCCCGGTGTAGTCCAGCAACCTGGACGCAGTCTCGGCTTTCCACTAAGGTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS GCA 72 bp AACTCTGTACCTCCTTGGAGGCCACCACGCACAAGCTaGCACTTCCTTACCCACACAGCCGATGGTCACCAC +
Preference number: 6 (lower is better)
Translates to: NSVPPWRPPRTS*HFLTHTADGHH
Trigger: GTGGTGACCATCGGCTGTGTGGGTAAGGAAGTGGCAGCTTGTGCGTGGTGGCCTCCAAGGAGGTACAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CCA 72 bp ACGCACAAGCTGCCACTTCCTTACCCACACAGCCGATaGTCACCACCCCATCCTTGTAGCGCTCTTGGGTTG +
Preference number: 6 (lower is better)
Translates to: THKLPLPYPHSR*SPPHPCSALGL
Trigger: CAACCCAAGAGCGCTACAAGGATGGGGTGGTGACCATCGGCTGTGTGGGTAAGGAAGTGGCAGCTTGTGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CAA 72 bp CAGGCAACCACAAGAGCTGGCGGGGCCAGATCCACCTaGTTCAAAACCAGCACCAGGGCCAGTCCAAGTTCT +
Preference number: 6 (lower is better)
Translates to: QATTRAGGARST*FKTSTRASPSS
Trigger: AGAACTTGGACTGGCCCTGGTGCTGGTTTTGAACAAGGTGGATCTGGCCCCGCCAGCTCTTGTGGTTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000456550.1
ENST00000458592.1
CDS CAA 72 bp CCTTGTAGCGCTCTTGGGTTGGGCCAGTTGGCTCCATaGCTGAATCAGTCTGCTGCTCCACCAGGACTGCTG +
Preference number: 6 (lower is better)
Translates to: PCSALGLGQLAP*LNQSAAPPGLL
Trigger: CAGCAGTCCTGGTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CAA 72 bp CCACCCCATCCTTGTAGCGCTCTTGGGTTGGGCCAGTaGGCTCCATTGCTGAATCAGTCTGCTGCTCCACCA +
Preference number: 6 (lower is better)
Translates to: PPHPCSALGLGQ*APLLNQSAAPP
Trigger: TGGTGGAGCAGCAGACTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGATGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS TCA 72 bp TCTCAGGCCCTCTGGCCCGAGAGCCTGTTGACTCTGTaGCACACTCTGAGGAGCTGGTTGTGGTGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: SQALWPESLLTL*HTLRSWLWCFP
Trigger: TGGAAAACACCACAACCAGCTCCTCAGAGTGTGTCACAGAGTCAACAGGCTCTCGGGCCAGAGGGCCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS TCA 72 bp CTCTCAGGGGCCATAAGACCCTCTCCCCCATCGGCCTaGCTCCCTTTCATCCCACTCAACTTCTTCCGATGT +
Preference number: 6 (lower is better)
Translates to: LSGAIRPSPPSA*LPFIPLNFFRC
Trigger: ACATCGGAAGAAGTTGAGTGGGATGAAAGGGAGTCAGGCCGATGGGGGAGAGGGTCTTATGGCCCCTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000416639.1
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000443235.1
ENST00000450423.1
ENST00000458592.1
CDS GCA 72 bp AGCTCCAACAACTCAGCACTGACCGGCTGTAGAACTTaGTCCCGGGCTGCTCTCTTTCTCCTCTCTACCTCC +
Preference number: 6 (lower is better)
Translates to: SSNNSALTGCRT*SRAALFLLSTS
Trigger: GGAGGTAGAGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS CCA 72 bp CCTGCAGCTGTTACCATAGTAACCGAGGACCGGATGTaGCGATCTTACGGTGCGACAGTCCTCTTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PAAVTIVTEDRM*RSYGATVLFSG
Trigger: GCCTGAGAAGAGGACTGTCGCACCGTAAGATCGCCACATCCGGTCCTCGGTTACTATGGTAACAGCTGCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 72 bp CCTGCTGTCTCTCTCAAAATGCAGTCGGTATCGATTTaGGTCGTAGCCTCGTGGACCCAGCCCCTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: PAVSLKMQSVSI*VVASWTQPLRR
Trigger: CCTTCTCAGGGGCTGGGTCCACGAGGCTACGACCCAAATCGATACCGACTGCATTTTGAGAGAGACAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS CCA 72 bp GTCCAAAAGCAAAGATACTGGGAGGGAAGATGGCGCTaGGCGAGGAACTCAGCACTCATCCTCACCCAGCAG +
Preference number: 6 (lower is better)
Translates to: VQKQRYWEGRWR*ARNSALILTQQ
Trigger: CTGCTGGGTGAGGATGAGTGCTGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTATCTTTGCTTTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CAA 72 bp GTGGACACGCTGAGGCTATACTACAAAGCCCCGGGCTaGACCTTAGTGGAAAGCCGAGACTGCGTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: VDTLRLYYKAPG*TLVESRDCVQV
Trigger: AACCTGGACGCAGTCTCGGCTTTCCACTAAGGTCAAGCCCGGGGCTTTGTAGTATAGCCTCAGCGTGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CAA 72 bp CCCTGCTGTCTCTCTCAAAATGCAGTCGGTATCGATTaGGGTCGTAGCCTCGTGGACCCAGCCCCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: PCCLSQNAVGID*GRSLVDPAPEK
Trigger: CTTCTCAGGGGCTGGGTCCACGAGGCTACGACCCAAATCGATACCGACTGCATTTTGAGAGAGACAGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS CAA 72 bp CGATGGTCACCACCCCATCCTTGTAGCGCTCTTGGGTaGGGCCAGTTGGCTCCATTGCTGAATCAGTCTGCT +
Preference number: 6 (lower is better)
Translates to: RWSPPHPCSALG*GQLAPLLNQSA
Trigger: AGCAGACTGATTCAGCAATGGAGCCAACTGGCCCAACCCAAGAGCGCTACAAGGATGGGGTGGTGACCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000481380.1
ENST00000481420.1
ENST00000486264.1
ENST00000487166.1
ENST00000487687.1
ENST00000488456.1
ENST00000490227.1
ENST00000497332.1
CDS CCA 72 bp AAAATGCAGTCGGTATCGATTTGGGTCGTAGCCTCGTaGACCCAGCCCCTGAGAAGGCTGCTGGTTAAGCCT +
Preference number: 6 (lower is better)
Translates to: KMQSVSIWVVAS*TQPLRRLLVKP
Trigger: AGGCTTAACCAGCAGCCTTCTCAGGGGCTGGGTCCACGAGGCTACGACCCAAATCGATACCGACTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS CCA 72 bp TGTTGGCTGCTCTGTACACATCATTCCGAGCCGCCTTaGCTGTCTTGTAACCACGTTTCTCTGCCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: CWLLCTHHSEPP*LSCNHVSLPRL
Trigger: AAGCCTGGGCAGAGAAACGTGGTTACAAGACAGCCAAGGCGGCTCGGAATGATGTGTACAGAGCAGCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS CCA 72 bp GGAAGCTCCGTTCCTCTTGGCTCATTAGTTGCTCCTTaGACATCTCATAGCTCCAAGGAGGACGTCGAGGAA +
Preference number: 6 (lower is better)
Translates to: GSSVPLGSLVAP*TSHSSKEDVEE
Trigger: TTCCTCGACGTCCTCCTTGGAGCTATGAGATGTCCAAGGAGCAACTAATGAGCCAAGAGGAACGGAGCTTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS TCA 72 bp GTAACAGAGCTAGCCAACAGGTACAGAATCCAGGTTTaGCCCTCTCTCTGGCCACAAAGCCCACACCCTTTT +
Preference number: 6 (lower is better)
Translates to: VTELANRYRIQV*PSLWPQSPHPF
Trigger: AAAAGGGTGTGGGCTTTGTGGCCAGAGAGAGGGTCAAACCTGGATTCTGTACCTGTTGGCTAGCTCTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000462708.1
ENST00000465483.1
ENST00000469494.1
ENST00000478748.1
ENST00000478986.1
ENST00000480572.1
ENST00000489631.1
ENST00000497917.1
CDS GCA 72 bp GGAACGATGATAAGGAGCAGGTTTACAGATCATAAGTaGAAAAGCGGGCGAGAAGGGAAACCCAAGCGGGAC +
Preference number: 6 (lower is better)
Translates to: GTMIRSRFTDHK*KSGREGKPKRD
Trigger: GTCCCGCTTGGGTTTCCCTTCTCGCCCGCTTTTGCACTTATGATCTGTAAACCTGCTCCTTATCATCGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383596.6
ENST00000417834.5
ENST00000428189.5
ENST00000437917.5
ENST00000441604.5
ENST00000454829.5
CDS CCA 72 bp TTGATGGAAATAATGCTTCCAGGCAACCACAAGAGCTaGCGGGGCCAGATCCACCTTGTTCAAAACCAGCAC +
Preference number: 6 (lower is better)
Translates to: LMEIMLPGNHKS*RGQIHLVQNQH
Trigger: GTGCTGGTTTTGAACAAGGTGGATCTGGCCCCGCCAGCTCTTGTGGTTGCCTGGAAGCATTATTTCCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000376621.8
ENST00000383450.3
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000456550.1
ENST00000458592.1
CDS TCA 72 bp GCTGCCTCCATGTCTCCAGATTGTGCTCAAAGTAGCTaGGTTTCTCAGAGGAGTAAGCCCCATGAATCTTCC +
Preference number: 6 (lower is better)
Translates to: AASMSPDCAQSS*VSQRSKPHESS
Trigger: GGAAGATTCATGGGGCTTACTCCTCTGAGAAACTCAGCTACTTTGAGCACAATCTGGAGACATGGAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS CCA 72 bp CAGTCCAAGTTCTCCAGTCACATACTCATAAAGTGCTaGCGGGAAATTCACAACTGGATGTCGGATATCAGT +
Preference number: 6 (lower is better)
Translates to: QSKFSSHILIKC*REIHNWMSDIS
Trigger: ACTGATATCCGACATCCAGTTGTGAATTTCCCGCCAGCACTTTATGAGTATGTGACTGGAGAACTTGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000376621.8
ENST00000383596.6
ENST00000416639.1
ENST00000417834.5
ENST00000428189.5
ENST00000430236.1
ENST00000433809.1
ENST00000435788.1
ENST00000437917.5
ENST00000441604.5
ENST00000443235.1
ENST00000450423.1
ENST00000454829.5
ENST00000458592.1
CDS CCA 72 bp TTAAGGAAATGGTATTGCAGAATACAAATCACGCTCTaGGCTGCCAGGGTTAAATCCTGGCCCTTCCACTTA +
Preference number: 6 (lower is better)
Translates to: LRKWYCRIQITL*AARVKSWPFHL
Trigger: TAAGTGGAAGGGCCAGGATTTAACCCTGGCAGCCCAGAGCGTGATTTGTATTCTGCAATACCATTTCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000464231.1
ENST00000467241.1
ENST00000467550.1
ENST00000479883.1
ENST00000483987.1
ENST00000492408.1
ENST00000495838.1
ENST00000496960.1