Pregenerated sensors for GNGT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000127928Ensembl transcript IDs: ENST00000428834.1, ENST00000430875.1, ENST00000455502.5
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCATGGTGGTGCACTAGGTGAGCTTCAAGGGGTCAGGGACCTTTaGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: EHGGALGELQGVRDL*LICSVYPSHLEQRL Trigger: CAGCCTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTGACCCCTTGAAGCTCACCTAGTGCACCACCATGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGTTGGCTTCACCCAGATaGCAGGAACAGAGGTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: GQGPLADLFSVSQPSRTELASPR*QEQRCN Trigger: GTTACACCTCTGTTCCTGTCATCTGGGTGAAGCCAA...CTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| 3UTR-3UTR CCA 90 bp | CTAGGTGAGCTTCAAGGGGTCAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAAAAGTCACTACTTTTaGCTTCACCCAGATGACAGG | + |
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Preference number: 2 (lower is better) Translates to: LGELQGVRDLWLICSVYPKSHYF*LHPDDR Trigger: CCTGTCATCTGGGTGAAGCCAAAAGTAGTGACTTTT...GGGATACACTGAACAAATCAGCCAAAGGTCCCTGACCCCTTGAAGCTCACCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGGCTTCTTCCTTCAAAGGATaGTACTTGCAGATTCACATA | + |
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Preference number: 2 (lower is better) Translates to: QGPLADLFSVSQPSRTEASSFKG*YLQIHI Trigger: TATGTGAATCTGCAAGTATCATCCTTTGAAGGAAGA...AGCCTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGGCTTTCTTTAGTGCTCAGTaGATAATTTGCTGGACTGAA | + |
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Preference number: 2 (lower is better) Translates to: QGPLADLFSVSQPSRTEAFFSAQ*IICWTE Trigger: TTCAGTCCAGCAAATTATTCACTGAGCACTAAAGAA...AGCCTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGCAAATTATTTTCAACTaGAGCCAGGAAGCATTTGTC | + |
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Preference number: 2 (lower is better) Translates to: GQGPLADLFSVSQPSRTEQIIFN*SQEAFV Trigger: GACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG...CTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTTTGGCTTCACCCAGATaGCAGGAACAGAGGTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: TNYFQLEPGSICQVSFFLLASPR*QEQRCN Trigger: GTTACACCTCTGTTCCTGTCATCTGGGTGAAGCCAA...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTAAAAGTCACTACTTTTaGCTTCACCCAGATGACAGG | + |
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Preference number: 2 (lower is better) Translates to: TNYFQLEPGSICQVSFFLKSHYF*LHPDDR Trigger: CCTGTCATCTGGGTGAAGCCAAAAGTAGTGACTTTT...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| 3UTR TCA 72 bp | CCATCTAGAACAGAGGCTGTGTTCTTTAGTGCTCAGTaGATAATTTGCTGGACTGAATTATTCATGTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: PSRTEAVFFSAQ*IICWTELFMLF Trigger: AAACAACATGAATAATTCAGTCCAGCAAATTATTCACTGAGCACTAAAGAACACAGCCTCTGTTCTAGATGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCACTGGTGGTGCACTAGGTaGGCTTCAAGGGGTCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SSSVVPHSLSKSHYFWLHWWCTR*ASRGQG Trigger: TCCCTGACCCCTTGAAGCTCACCTAGTGCACCACCA...GTGAAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | CCCTCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTTTGGCTTCACCCAGATaGCAGGAACAGAGGTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: PSSSVVPHSLSKSHYFWLLASPR*QEQRCN Trigger: GTTACACCTCTGTTCCTGTCATCTGGGTGAAGCCAA...AAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | CAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGGCTTCAGGGACCTTTGGCTaGTTTGTTCAGTGTATCCCA | + |
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Preference number: 4 (lower is better) Translates to: QGPLADLFSVSQPSRTEASGTFG*FVQCIP Trigger: TGGGATACACTGAACAAATCAGCCAAAGGTCCCTGA...AGCCTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | CCCTCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTGGTTCACAACACAGCTaGCAACAGAAGTCAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PSSSVVPHSLSKSHYFWLGSQHS*QQKSRV Trigger: CACCCTTGACTTCTGTTGCCAGCTGTGTTGTGAACC...AAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCACATAAGGGATTGGTTTTaGAGGTGCCTGGCTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: SSSVVPHSLSKSHYFWLHIRDWF*RCLAGI Trigger: AATCCCAGCCAGGCACCTTCAAAACCAATCCCTTAT...GTGAAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCACCTCATCTACAATGATTaGGCATGGTGGTGCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: SSSVVPHSLSKSHYFWLHLIYND*AWWCTR Trigger: CCTAGTGCACCACCATGCTCAATCATTGTAGATGAG...GTGAAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR GCA 90 bp | GGTCAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGTTACTGGCATCTTTTTaGCTGTCATTTCTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GQGPLADLFSVSQPSRTELLASF*LSFLGV Trigger: GACCCCAAGAAATGACAGGCAAAAAGATGCCAGTAA...CTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | CCCTCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTGGTTTTGAAGGTGCCTaGCTGGGATTAGCATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: PSSSVVPHSLSKSHYFWLGFEGA*LGLAFF Trigger: AAAGAATGCTAATCCCAGCCAGGCACCTTCAAAACC...AAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | TCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCACGGTTTTGAAGGTGCCTaGCTGGGATTAGCATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SSSVVPHSLSKSHYFWLHGFEGA*LGLAFF Trigger: AAAGAATGCTAATCCCAGCCAGGCACCTTCAAAACC...GTGAAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | TCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCACCCAGATGGTTTTGAAGGTGCCTaGCTGGGATTAGCATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SVVPHSLSKSHYFWLHPDGFEGA*LGLAFF Trigger: AAAGAATGCTAATCCCAGCCAGGCACCTTCAAAACC...ATCTGGGTGAAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | CCCTCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTTTGCCTGTCATTTCTTaGGGTCGTATTCCTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: PSSSVVPHSLSKSHYFWLLPVIS*GRIPDF Trigger: GAAATCAGGAATACGACCCCAAGAAATGACAGGCAA...AAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | TCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCACCCAGATAAAAGTCACTACTTTTaGCTTCACCCAGATGACAGG | + |
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Preference number: 4 (lower is better) Translates to: SVVPHSLSKSHYFWLHPDKSHYF*LHPDDR Trigger: CCTGTCATCTGGGTGAAGCCAAAAGTAGTGACTTTT...ATCTGGGTGAAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | CAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGGCTCAAATTATTTTCAACTaGAGCCAGGAAGCATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: QGPLADLFSVSQPSRTEAQIIFN*SQEAFV Trigger: GACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG...AGCCTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | CCCTCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTTCTTCCTTCAAAGGATaGTACTTGCAGATTCACATA | + |
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Preference number: 4 (lower is better) Translates to: PSSSVVPHSLSKSHYFWLSSFKG*YLQIHI Trigger: TATGTGAATCTGCAAGTATCATCCTTTGAAGGAAGA...AAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | CCCTCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCAAATTATTTTCAACTaGAGCCAGGAAGCATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: PSSSVVPHSLSKSHYFWLQIIFN*SQEAFV Trigger: GACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG...AAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | CAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGGCTCTCAATATTGATTACTaGCATCTTTTTGCCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: QGPLADLFSVSQPSRTEALNIDY*HLFACH Trigger: ATGACAGGCAAAAAGATGCCAGTAATCAATATTGAG...AGCCTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | TCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCACTCTTCCTTCAAAGGATaGTACTTGCAGATTCACATA | + |
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Preference number: 4 (lower is better) Translates to: SSSVVPHSLSKSHYFWLHSSFKG*YLQIHI Trigger: TATGTGAATCTGCAAGTATCATCCTTTGAAGGAAGA...GTGAAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTATAAGGGATTGGTTTTaGAGGTGCCTGGCTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: TNYFQLEPGSICQVSFFLIRDWF*RCLAGI Trigger: AATCCCAGCCAGGCACCTTCAAAACCAATCCCTTAT...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | CAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCTACACTCATCTACAATaGTTGAGCATGGTGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: QIIFNWSQEAFVRLVSSFYTHLQ*LSMVVH Trigger: GTGCACCACCATGCTCAATCATTGTAGATGAGTGTA...GAAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | CAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCTTGGGGTCGTATTCCTaGTTTCAGAAGAGGATCATA | + |
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Preference number: 4 (lower is better) Translates to: QIIFNWSQEAFVRLVSSFLGSYS*FQKRII Trigger: TATGATCCTCTTCTGAAATCAGGAATACGACCCCAA...GAAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | CAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCAAAAGTCACTACTTTTaGCTTCACCCAGATGACAGG | + |
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Preference number: 4 (lower is better) Translates to: QIIFNWSQEAFVRLVSSFKSHYF*LHPDDR Trigger: CCTGTCATCTGGGTGAAGCCAAAAGTAGTGACTTTT...GAAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | CAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCTCAGGTCCTCAATATTaGTTACTGGCATCTTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: QIIFNWSQEAFVRLVSSFSGPQY*LLASFC Trigger: GCAAAAAGATGCCAGTAATCAATATTGAGGACCTGA...GAAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTTCAGGTCCTCAATATTaGTTACTGGCATCTTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: TNYFQLEPGSICQVSFFLSGPQY*LLASFC Trigger: GCAAAAAGATGCCAGTAATCAATATTGAGGACCTGA...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR TCA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTGTTAGCAGCTATGCATaGATTGCTGGAGTTATTTCA | + |
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Preference number: 4 (lower is better) Translates to: TNYFQLEPGSICQVSFFLVSSYA*IAGVIS Trigger: TGAAATAACTCCAGCAATTCATGCATAGCTGCTAAC...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430875.1 |
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| CDS-3UTR TCA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTTCTTCCTTCAAAGGATaGTACTTGCAGATTCACATA | + |
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Preference number: 4 (lower is better) Translates to: TNYFQLEPGSICQVSFFLSSFKG*YLQIHI Trigger: TATGTGAATCTGCAAGTATCATCCTTTGAAGGAAGA...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR GCA 90 bp | CAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCTTACTGGCATCTTTTTaGCTGAAAGTAAACTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QIIFNWSQEAFVRLVSSFLLASF*LKVNCS Trigger: AGAACAGTTTACTTTCAGGCAAAAAGATGCCAGTAA...GAAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000428834.1 |
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| CDS-3UTR CCA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCAAATTATTTTCAACTaGAGCCAGGAAGCATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: TNYFQLEPGSICQVSFFLQIIFN*SQEAFV Trigger: GACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CCA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCTATGCATGAATTGCTaGAGTTATTTCAAGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: TNYFQLEPGSICQVSFFLLCMNC*SYFKSV Trigger: GACTGACTTGAAATAACTCCAGCAATTCATGCATAG...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430875.1 |
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| CDS-3UTR CCA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTTGTCAGTCTATTAAGTaGCCATTCCATAAGTCATTT | + |
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Preference number: 4 (lower is better) Translates to: TNYFQLEPGSICQVSFFLCQSIK*PFHKSF Trigger: AAATGACTTATGGAATGGCCACTTAATAGACTGACA...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000428834.1 ENST00000455502.5 |
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| CDS CCA 90 bp | CGGGTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGTGAGGCATTGC | + |
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Preference number: 5 (lower is better) Translates to: RVHLTRECQTVGAGQ*VRAPCASRSRVRHC Trigger: GCAATGCCTCACCCTGCTTCGGCTCGCGCACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS TCA 90 bp | ACAGCTCCGGTCTACAGCTCCCAGCGCGAGCGACGCAGAAGACGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGG | + |
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Preference number: 5 (lower is better) Translates to: TAPVYSSQRERRRRR*FLHFHLRYRVHLTR Trigger: CCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCGCGCTGGGAGCTGTAGACCGGAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | GGTCAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCAGCCATCTAGAACAGAGGGACCTTTGGCTGATTaGTTCAGTGTATCCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GQGPLADLFSVSQPSRTEGPLAD*FSVSQP Trigger: TGGCTGGGATACACTGAACAAATCAGCCAAAGGTCC...CTCTGTTCTAGATGGCTGGGATACACTGAACAAATCAGCCAAAGGTCCCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | TCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCACCCAGATGTAGTCCATAAGGGATaGGTTTTGAAGGTGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: SVVPHSLSKSHYFWLHPDVVHKG*VLKVPG Trigger: GCCAGGCACCTTCAAAACCAATCCCTTATGGACTAC...ATCTGGGTGAAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | CTAGGTGAGCTTCAAGGGGTCAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCATTACTGGCATCTTTTaGCCTGTCATTTCTTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LGELQGVRDLWLICSVYPITGIF*PVISWG Trigger: ACCCCAAGAAATGACAGGCAAAAAGATGCCAGTAAT...GGGATACACTGAACAAATCAGCCAAAGGTCCCTGACCCCTTGAAGCTCACCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | CTAGGTGAGCTTCAAGGGGTCAGGGACCTTTGGCTGATTTGTTCAGTGTATCCCGTCAGGTCCTCAATATaGATTACTGGCATCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: LGELQGVRDLWLICSVYPVRSSI*ITGIFL Trigger: CAAAAAGATGCCAGTAATCAATATTGAGGACCTGAC...GGGATACACTGAACAAATCAGCCAAAGGTCCCTGACCCCTTGAAGCTCACCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS TCA 90 bp | GATTACTGGCATCTTTTTGCCTGTCATTTCTTGGGGTCGTATTCCTaGTTTCAGAAGAGGATCATAATTGTGGAGGAGCCAAGATGGCCG | + |
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Preference number: 5 (lower is better) Translates to: DYWHLFACHFLGSYS*FQKRIIIVEEPRWP Trigger: CGGCCATCTTGGCTCCTCCACAATTATGATCCTCTTCTGAAATCAGGAATACGACCCCAAGAAATGACAGGCAAAAAGATGCCAGTAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | TCTTCCTCAGTGGTCCCACACTCTCTCTCTAAAAGTCACTACTTTTGGCTTCACGTCAGGTCCTCAATATaGATTACTGGCATCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: SSSVVPHSLSKSHYFWLHVRSSI*ITGIFL Trigger: CAAAAAGATGCCAGTAATCAATATTGAGGACCTGAC...GTGAAGCCAAAAGTAGTGACTTTTAGAGAGAGAGTGTGGGACCACTGAGGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | CAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCGTAGTCCATAAGGGATaGGTTTTGAAGGTGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: QIIFNWSQEAFVRLVSSFVVHKG*VLKVPG Trigger: GCCAGGCACCTTCAAAACCAATCCCTTATGGACTAC...GAAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | CAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCAGGGGTCAGGGACCTTaGGCTGATTTGTTCAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: QIIFNWSQEAFVRLVSSFRGQGP*ADLFSV Trigger: TACACTGAACAAATCAGCCAAAGGTCCCTGACCCCT...GAAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCATAAGGGATTGGTTTaGAAGGTGCCTGGCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: TNYFQLEPGSICQVSFFLHKGLV*KVPGWD Trigger: ATCCCAGCCAGGCACCTTCAAAACCAATCCCTTATG...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTGCAGCTATGCATGAATaGCTGGAGTTATTTCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: TNYFQLEPGSICQVSFFLAAMHE*LELFQV Trigger: GACTTGAAATAACTCCAGCAATTCATGCATAGCTGC...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430875.1 |
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| CDS-3UTR CAA 90 bp | CAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCATGTTGTTTTTGAGCTaGCTCTTCACTTATCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: QIIFNWSQEAFVRLVSSFMLFLS*LFTYLH Trigger: GTGCAGATAAGTGAAGAGCAAGCTCAAAAACAACAT...GAAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | CAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTCATTACTGGCATCTTTTaGCCTGAAAGTAAACTGTTC | + |
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Preference number: 5 (lower is better) Translates to: QIIFNWSQEAFVRLVSSFITGIF*PESKLF Trigger: GAACAGTTTACTTTCAGGCAAAAAGATGCCAGTAAT...GAAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428834.1 |
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| CDS-3UTR CAA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTGTCAGGTCCTCAATATaGATTACTGGCATCTTTTTG | + |
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Preference number: 5 (lower is better) Translates to: TNYFQLEPGSICQVSFFLVRSSI*ITGIFL Trigger: CAAAAAGATGCCAGTAATCAATATTGAGGACCTGAC...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000428834.1 ENST00000430875.1 ENST00000455502.5 |
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| CDS-3UTR CAA 90 bp | ACAAATTATTTTCAACTGGAGCCAGGAAGCATTTGTCAGGTTAGTTTCTTCCTTATTACTGGCATCTTTTaGCCTGCTGAAGATGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: TNYFQLEPGSICQVSFFLITGIF*PAEDVE Trigger: TTCTACATCTTCAGCAGGCAAAAAGATGCCAGTAAT...AAGGAAGAAACTAACCTGACAAATGCTTCCTGGCTCCAGTTGAAAATAATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430875.1 |
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| CDS CCA 72 bp | CTCACTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTaGGTGCGCGCACCGTGCGCGAGCCGAAGCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LTRECQTVGAGQ*VRAPCASRSRV Trigger: CACCCTGCTTCGGCTCGCGCACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAGTGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS GCA 72 bp | CAGACAGTGGGCGCAGGTCAGTGGGTGCGCGCACCGTaGGCGAGCCGAAGCAGGGTGAGGCATTGCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: QTVGAGQWVRAP*ASRSRVRHCLT Trigger: AGTGAGGCAATGCCTCACCCTGCTTCGGCTCGCGCACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS TCA 72 bp | GTCTACAGCTCCCAGCGCGAGCGACGCAGAAGACGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: VYSSQRERRRRR*FLHFHLRYRVH Trigger: ATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCTCGCGCTGGGAGCTGTAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS TCA 72 bp | AGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTaGGGTACCGGGTTCATCTCACTAGGGAGTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SDAEDGDFCISI*GTGFISLGSAR Trigger: TCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCGTCTTCTGCGTCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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| CDS TCA 72 bp | CATCTTTTTGCCTGTCATTTCTTGGGGTCGTATTCCTaGTTTCAGAAGAGGATCATAATTGTGGAGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: HLFACHFLGSYS*FQKRIIIVEEP Trigger: TGGCTCCTCCACAATTATGATCCTCTTCTGAAATCAGGAATACGACCCCAAGAAATGACAGGCAAAAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455502.5 |
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