RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNE (Homo sapiens)

Ensembl gene IDs: ENSG00000159921

Ensembl transcript IDs: ENST00000396594.8, ENST00000447283.6, ENST00000539208.5, ENST00000543356.7, ENST00000642385.2, ENST00000644762.1

Found 531 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAGTTCACTGCCAGCTCCGCCTCCCTGGTTCATGCCATTCTCCTaGCTCAGCCTCCCGAGTAGCTGGGACCCGCCACCACACCCAGCT +
Preference number: 1 (lower is better)
Translates to: LSSLPAPPPWFMPFS*LSLPSSWDPPPHPA
Trigger: AGCTGGGTGTGGTGGCGGGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATGAACCAGGGAGGCGGAGCTGGCAGTGAACTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR TCA 90 bp ACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATaGAAGGCTACTGAAGGAAGAAGTGTCTGCTGGTCAGTAGCAAAG +
Preference number: 1 (lower is better)
Translates to: TQNFNGHPRVLLNTV*KATEGRSVCWSVAK
Trigger: CTTTGCTACTGACCAGCAGACACTTCTTCCTTCAGTAGCCTTTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR TCA 90 bp GAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTTaGTTGTTAAGAAACGGTCATCCTAAAGACAAGAACTTGATTCCA +
Preference number: 1 (lower is better)
Translates to: ENISLPKSPAVQYQI*LLRNGHPKDKNLIP
Trigger: TGGAATCAAGTTCTTGTCTTTAGGATGACCGTTTCTTAACAATCAAATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR GCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGCGGTCTCAGTTCACTaGCAGCTCCGCCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRAVSVH*QLRLPG
Trigger: ACCAGGGAGGCGGAGCTGGCAGTGAACTGAGACCGC...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR GCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGCTGGAGTGCAGTGGTaGGGTCTCAGTTCACTGCCA +
Preference number: 2 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRAGVQW*GLSSLP
Trigger: TGGCAGTGAACTGAGACCGCACCACTGCACTCCAGC...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR TCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCAGCGGTCTCGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPAVSIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCGAGACCGC...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR GCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTCGCCTCCCTGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFRLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCAGGGAGGCG...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR GCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAAGCGGTCTCAGTTCACTaGCAGCTCCGCCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEAVSVH*QLRLPG
Trigger: ACCAGGGAGGCGGAGCTGGCAGTGAACTGAGACCGC...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR GCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTGCTGGAGTGCAGTGGTaGGGTCTCAGTTCACTGCCA +
Preference number: 2 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFAGVQW*GLSSLP
Trigger: TGGCAGTGAACTGAGACCGCACCACTGCACTCCAGC...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR TCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGAACTTCAGGATGAAGTaGTATCCCAGGCAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRNFRMK*YPRQGL
Trigger: CAGGCCTTGCCTGGGATATCACTTCATCCTGAAGTT...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR GCA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTTCACCCAGGGTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICSPRVE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCACCCTGGGTGA...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR CCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCACCAGCTCCGCCTCCCTaGTTCATGCCATTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPPAPPP*FMPFSC
Trigger: GCAGGAGAATGGCATGAACCAGGGAGGCGGAGCTGG...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR TCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCTAAAGACAAGAACTTaGTTCCACTCAGGAGCTCTG +
Preference number: 2 (lower is better)
Translates to: EETKSENISLPKSPAVQYLKTRT*FHSGAL
Trigger: CAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAG...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR TCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGGGTTTGAGCTAAAATaGCCCCTAGTAAGAAGACAT +
Preference number: 2 (lower is better)
Translates to: VISQARPEGLSGINTLVSGFELK*PLVRRH
Trigger: ATGTCTTCTTACTAGGGGTCATTTTAGCTCAAACCC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR TCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGTAACTTACAGGGTTTaGGCTAAAATGACCCCTAGT +
Preference number: 2 (lower is better)
Translates to: VISQARPEGLSGINTLVSVTYRV*AKMTPS
Trigger: ACTAGGGGTCATTTTAGCTCAAACCCTGTAAGTTAC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR TCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAGTATGAAAGGCTACTaGAGGAAGAAGTGTCTGCTG +
Preference number: 2 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFSMKGY*RKKCLL
Trigger: CAGCAGACACTTCTTCCTTCAGTAGCCTTTCATACT...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR GCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTATCTGCCAAAGTCACCTaGAGTTCAATACCAGATTTG +
Preference number: 2 (lower is better)
Translates to: EVISQARPEGLSGINTLVSAKVT*SSIPDL
Trigger: CAAATCTGGTATTGAACTGCAGGTGACTTTGGCAGA...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR TCA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTACTAAAGACAAGAACTTaGTTCCACTCAGGAGCTCTG +
Preference number: 2 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVLKTRT*FHSGAL
Trigger: CAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAG...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR TCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAAGAGGAGACCAAAAGTaGAAACATTTCTCTGCCAAA +
Preference number: 2 (lower is better)
Translates to: ISQARPEGLSGINTLVSRRGDQK*KHFSAK
Trigger: TTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCT...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR TCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATCTAAAGACAAGAACTTaGTTCCACTCAGGAGCTCTG +
Preference number: 2 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYLKTRT*FHSGAL
Trigger: CAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAG...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR TCA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTCTAAAGACAAGAACTTaGTTCCACTCAGGAGCTCTG +
Preference number: 2 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICLKTRT*FHSGAL
Trigger: CAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAG...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR TCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTTTACTCAACACAGTATaGAAGGCTACTGAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFLLNTV*KATEGR
Trigger: TCTTCCTTCAGTAGCCTTTCATACTGTGTTGAGTAA...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR GCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGCTCTATTATTGTAGCTaGTTTGGCACAGAAAATTGT +
Preference number: 2 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRLYYCS*FGTENC
Trigger: ACAATTTTCTGTGCCAAAGCAGCTACAATAATAGAG...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR TCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCAGGGTTTGAGCTAAAATaGCCCCTAGTAAGAAGACAT +
Preference number: 2 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPGFELK*PLVRRH
Trigger: ATGTCTTCTTACTAGGGGTCATTTTAGCTCAAACCC...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR CCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCAGCCACTGCGCCCAGCTaGAAGGATTATTATTATTAT +
Preference number: 2 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPATAPS*KDYYYY
Trigger: ATAATAATAATAATCCTTCCAGCTGGGCGCAGTGGC...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR CAA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCCCTAAAGACAAGAACTaGATTCCACTCAGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: VISQARPEGLSGINTLVSPKDKN*IPLRSS
Trigger: AGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR CAA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCCTAAAGACAAGAACTaGATTCCACTCAGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: EETKSENISLPKSPAVQYPKDKN*IPLRSS
Trigger: AGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR CAA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCCTAAAGACAAGAACTaGATTCCACTCAGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: ETKSENISLPKSPAVQYQPKDKN*IPLRSS
Trigger: AGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR CAA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTACCTAAAGACAAGAACTaGATTCCACTCAGGAGCTCT +
Preference number: 3 (lower is better)
Translates to: EVISQARPEGLSGINTLVPKDKN*IPLRSS
Trigger: AGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
3UTR CCA 72 bp CACGAATCATGTAGACAGAATCCTGATTCATGGCTCTaGGCTCTAGGTAAAACTCAAAACTTTAATGGACAC +
Preference number: 3 (lower is better)
Translates to: HESCRQNPDSWL*ALGKTQNFNGH
Trigger: GTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACATGATTCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
3UTR-3UTR CAA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAATTATTGTAGCTGCTTaGGCACAGAAAATTGTGACT +
Preference number: 3 (lower is better)
Translates to: EVISQARPEGLSGINTLVIIVAA*AQKIVT
Trigger: AGTCACAATTTTCTGTGCCAAAGCAGCTACAATAAT...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
3UTR-3UTR CAA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAAGATATGTCCAGTGTCTaGATTGTGGTGATGCTTTCA +
Preference number: 3 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEDMSSV*IVVMLS
Trigger: TGAAAGCATCACCACAATCAAGACACTGGACATATC...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGACCACATCCACGTCCTaGACGGAGGACAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRTTSTS*TEDKAC
Trigger: GCAGGCCTTGTCCTCCGTGCAGGACGTGGATGTGGT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGCGGTCTCAGTTCACTaGCAGCTCCGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSAVSVH*QLRLPG
Trigger: ACCAGGGAGGCGGAGCTGGCAGTGAACTGAGACCGC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCCAGCTCCGCCTCCCTaGTTCATGCCATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRPAPPP*FMPFSC
Trigger: GCAGGAGAATGGCATGAACCAGGGAGGCGGAGCTGG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGCGGTCTCGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRAVSIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCGAGACCGC...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGTCACCCAGGGTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRSPRVE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCACCCTGGGTGA...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGGCAGAGCGCGAGCCTaGCCCTCGGTTTCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQGRARA*PSVSAL
Trigger: GAGCGCGGAAACCGAGGGGCAGGCTCGCGCTCTGCC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539208.5
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGGCAGCTTGGATGAGATaGAGCGCACCCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRAAWMR*SAPTAS
Trigger: TGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGC...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGGTGCTGCTCTGCACTaGGGGTGCAGCACACATGAT +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSGAALH*GCSTHD
Trigger: ATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGATGGATATCAGGTGCTaGTCTGCACTGCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRMDIRC*SALRVQ
Trigger: CTGCACCCGCAGTGCAGAGCAGCACCTGATATCCAT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCACATGGATATCAGGTaGTGCTCTGCACTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRHMDIR*CSALRV
Trigger: CACCCGCAGTGCAGAGCAGCACCTGATATCCATGTG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGAAGGTGGCCCAGTTCTaGAGCACAGAAGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRKVAQF*STEGAS
Trigger: GGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGACGGAGGACAAGGCCTaGTGGCGAATGACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRTEDKA*WRMTSL
Trigger: CAAAGACGTCATTCGCCAGCAGGCCTTGTCCTCCGT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTGGCAGAGCGCGAGCCTaGCCCTCGGTTTCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFGRARA*PSVSAL
Trigger: GAGCGCGGAAACCGAGGGGCAGGCTCGCGCTCTGCC...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCTACTGACTCCACCATaGCTGCCTCATCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRLLTPP*LPHLLP
Trigger: GGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCCAAGTTTCGCAGCTTaGATGAGATGGAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRPSFAA*MRWSAP
Trigger: GGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAGCCTCCCGAGTAGCTaGGACCCGCCACCACACCCA +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFSLPSS*DPPPHP
Trigger: TGGGTGTGGTGGCGGGTCCCAGCTACTCGGGAGGCT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGCCTCCCGAGTAGCTaGGACCCGCCACCACACCCA +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSSLPSS*DPPPHP
Trigger: TGGGTGTGGTGGCGGGTCCCAGCTACTCGGGAGGCT...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCGTTTCGCAGCTTGGATaGGATGGAGCGCACCCACAG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVVSQLG*DGAHPQ
Trigger: CTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAAC...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCCCAGACTCAGAAACTaGGCAGCCAAGCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSPRLRN*AAKLPS
Trigger: GGAAGGAAGCTTGGCTGCTCAGTTTCTGAGTCTGGG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGTCTGGGCCTTCGCATTaGCAAGTTTCGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRSGPSH*QVSQLG
Trigger: TCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGA...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCTACTGACTCCACCATaGCTGCCTCATCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLLTPP*LPHLLP
Trigger: GGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCCAAGTTTCGCAGCTTaGATGAGATGGAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSPSFAA*MRWSAP
Trigger: GGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGTGTGGATATAGTGACTaGCCAGGACTCCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRCGYSD*PGLRRG
Trigger: TCCTCTCCGGAGTCCTGGCCAGTCACTATATCCACA...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGAGGTCCTTGAAAGCATaGCTCCCTCTGCAGATAACC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRRSLKA*LPLQIT
Trigger: GGTTATCTGCAGAGGGAGTCATGCTTTCAAGGACCT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000543356.7
CDS-3UTR TCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGGCACGAAAGTTGGGATaGTGCTCAATGCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRARKLG*CSMPFF
Trigger: GAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGC...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTAGCGGTCTCGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVAVSIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCGAGACCGC...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGCTCTGCACTGCGGGTaGAGCACACATGATAATGAG +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSALHCG*STHDNE
Trigger: CTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCATGGATATCAGGTGCTaGTCTGCACTGCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVMDIRC*SALRVQ
Trigger: CTGCACCCGCAGTGCAGAGCAGCACCTGATATCCAT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCACATGGATATCAGGTaGTGCTCTGCACTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFHMDIR*CSALRV
Trigger: CACCCGCAGTGCAGAGCAGCACCTGATATCCATGTG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGAGCCTGCCAAAAGGATaGGATCATGGTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRSLPKG*DHGPHT
Trigger: TGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCTCGAACCCCACAGCTaGTGTTCCCAATCATACAGC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLEPHS*CSQSYS
Trigger: GCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCATTCCAGAGGCGTATaGTTCAATGCACCCATGGCT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRHSRGV*FNAPMA
Trigger: AGCCATGGGTGCATTGAAGCATACGCCTCTGGAATG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTCTGGGCCTTCGCATTaGCAAGTTTCGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSSGPSH*QVSQLG
Trigger: TCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCACGGAGGACAAGGCCTaGTGGCGAATGACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVTEDKA*WRMTSL
Trigger: CAAAGACGTCATTCGCCAGCAGGCCTTGTCCTCCGT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCACCACATCCACGTCCTaGACGGAGGACAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFTTSTS*TEDKAC
Trigger: GCAGGCCTTGTCCTCCGTGCAGGACGTGGATGTGGT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAGCGGTCTCAGTTCACTaGCAGCTCCGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRAVSVH*QLRLPG
Trigger: ACCAGGGAGGCGGAGCTGGCAGTGAACTGAGACCGC...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCTCGAACCATCTCTTTaGTCCCTAGCCACATGCGAA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRLEPSL*SLATCE
Trigger: TTCGCATGTGGCTAGGGAGCAAAGAGATGGTTCGAG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539208.5
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGAGGACAAGGCCTGCTaGCGAATGACGTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSEDKAC*RMTSLT
Trigger: TGTCAAAGACGTCATTCGCCAGCAGGCCTTGTCCTC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGCCAGCTCCGCCTCCCTaGTTCATGCCATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRPAPPP*FMPFSC
Trigger: GCAGGAGAATGGCATGAACCAGGGAGGCGGAGCTGG...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGCACGAAAGTTGGGATaGTGCTCAATGCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSARKLG*CSMPFF
Trigger: GAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCTCATCTTTTGGCACTaGCATCCCTTCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLIFWH*HPFHQE
Trigger: CTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGTTTCGCAGCTTGGATaGGATGGAGCGCACCCACAG +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSVSQLG*DGAHPQ
Trigger: CTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAAC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGGTGCTGCTCTGCACTaGGGGTGCAGCACACATGAT +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSGAALH*GCSTHD
Trigger: ATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGTATCAGGTGCTGCTCTaGACTGCGGGTGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRYQVLL*TAGAAH
Trigger: GTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATA...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCTATCAGGTGCTGCTCTaGACTGCGGGTGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFYQVLL*TAGAAH
Trigger: GTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATA...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCTATCAGGTGCTGCTCTaGACTGCGGGTGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSYQVLL*TAGAAH
Trigger: GTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATA...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCTTCATGCTGACTATTaGAACTCGGAGGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLHADY*NSEVRP
Trigger: GGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCAGGCGTATGCTTCAATaGACCCATGGCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVRRMLQ*THGFHR
Trigger: CCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCTCTGGGCCTTCGCATTaGCAAGTTTCGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFSGPSH*QVSQLG
Trigger: TCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGA...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTCTGGGCCTTCGCATTaGCAAGTTTCGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVSGPSH*QVSQLG
Trigger: TCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGA...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCAGCTGTTCTTAGGATaGTCTGGGCCTTCGCATTGC +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFQLFLG*SGPSHC
Trigger: GCAATGCGAAGGCCCAGAGCATCCTAAGAACAGCTG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGACCACATCCACGTCCTaGACGGAGGACAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQTTSTS*TEDKAC
Trigger: GCAGGCCTTGTCCTCCGTGCAGGACGTGGATGTGGT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAACCACATCCACGTCCTaGACGGAGGACAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRTTSTS*TEDKAC
Trigger: GCAGGCCTTGTCCTCCGTGCAGGACGTGGATGTGGT...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTCCAGTCCCTTTCCTTaGCCAAATTTCCTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSSSPFP*PNFLSA
Trigger: GGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGGCTTCAATGCACCCATaGCTTCCACAGGAACAATCA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRASMHP*LPQEQS
Trigger: TGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGC...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCGCAGCTTGGATGAGATaGAGCGCACCCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFAAWMR*SAPTAS
Trigger: TGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGC...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGTTCTTAGGATGCTCTaGGCCTTCGCATTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSVLRML*AFALPS
Trigger: ACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAAC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGGAGGGATTCATGGTATaGAGGATGTTCACAACCCCA +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWREGFMV*RMFTTP
Trigger: TGGGGTTGTGAACATCCTCCATACCATGAATCCCTC...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCTGTGGATATAGTGACTaGCCAGGACTCCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFCGYSD*PGLRRG
Trigger: TCCTCTCCGGAGTCCTGGCCAGTCACTATATCCACA...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTGGATATAGTGACTaGCCAGGACTCCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVCGYSD*PGLRRG
Trigger: TCCTCTCCGGAGTCCTGGCCAGTCACTATATCCACA...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGTCCATGTCTGTTCCTaGAGGTCTAGTAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSVHVCS*RSSRSC
Trigger: GCAGGATCTACTAGACCTCCAGGAACAGACATGGAC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCCAGGGTGGAGTGCAGTaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSQGGVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCACTGCACTCCACCCTG...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCACAATAACCAGGCCCTaGAGATTACTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFTITRP*RLLQGW
Trigger: CCAGCCCTGCAGTAATCTCCAGGGCCTGGTTATTGT...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTCCCCACCTTCAATGTaGAGGATTCGGATGTTCATC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSSPPSM*RIRMFI
Trigger: GATGAACATCCGAATCCTTCACATTGAAGGTGGGGA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCCATCAATGGTCCCACTaGCTTCCCCACCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVHQWSH*LPHLQC
Trigger: ACATTGAAGGTGGGGAAGTCAGTGGGACCATTGATG...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCGACGTGTTCCCAGGTTaGTCACAGGTGTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVDVFPG*SQVFQK
Trigger: CTTTTGGAACACCTGTGATCAACCTGGGAACACGTC...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTCAGCATCCCGGACATaGAGAACATTCTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVSASRT*RTFSPV
Trigger: AACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGA...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTTTCACCCTTCATGCTaGCTATTGCAACTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSFHPSC*LLQLGG
Trigger: ACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCCTCATCTTTTGGCACTaGCATCCCTTCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVLIFWH*HPFHQE
Trigger: CTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAG...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCTAAAGACAAGAACTTaGTTCCACTCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRLKTRT*FHSGAL
Trigger: CAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTCACCATGGAATGTCTaGACAATAACCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVSPWNV*TITRPW
Trigger: CCAGGGCCTGGTTATTGTTCAGACATTCCATGGTGA...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCCCCAGACTCAGAAACTaGGCAGCCAAGCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFPRLRN*AAKLPS
Trigger: GGAAGGAAGCTTGGCTGCTCAGTTTCTGAGTCTGGG...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGATATCAGGTGCTGCTCTaGACTGCGGGTGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRYQVLL*TAGAAH
Trigger: GTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATA...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCCACATGGATATCAGGTaGTGCTCTGCACTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFHMDIR*CSALRV
Trigger: CACCCGCAGTGCAGAGCAGCACCTGATATCCATGTG...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCAGCCTGCCAAAAGGATaGGATCATGGTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFSLPKG*DHGPHT
Trigger: TGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCT...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCATAGGAAGGGCAGCCTaGCAAAAGGATGCGATCATG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVIGRAA*QKDAIM
Trigger: CATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTAT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCTGGGATGATGCTCAATaGCCTTCTTCCGCATCACTC +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFWDDAQ*PSSASL
Trigger: GAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCA...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCCTTCATGCTGACTATTaGAACTCGGAGGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVLHADY*NSEVRP
Trigger: GGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAG...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTTCATGCTGACTATTaGAACTCGGAGGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFLHADY*NSEVRP
Trigger: GGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAAGGTGGCCCAGTTCTaGAGCACAGAAGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFKVAQF*STEGAS
Trigger: GGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCCATTCCAGAGGCGTATaGTTCAATGCACCCATGGCT +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVHSRGV*FNAPMA
Trigger: AGCCATGGGTGCATTGAAGCATACGCCTCTGGAATG...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCATTCCAGAGGCGTATaGTTCAATGCACCCATGGCT +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFHSRGV*FNAPMA
Trigger: AGCCATGGGTGCATTGAAGCATACGCCTCTGGAATG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGCTGGAGTGCAGTGGTaGGGTCTCAGTTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQAGVQW*GLSSLP
Trigger: TGGCAGTGAACTGAGACCGCACCACTGCACTCCAGC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTTACACGGCCACCTGTaGAAATGCCTACTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLHGHL*KCLLPK
Trigger: TTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACGCAGCTTGGATGAGATaGAGCGCACCCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYAAWMR*SAPTAS
Trigger: TGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGC...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGCAGCTTGGATGAGATaGAGCGCACCCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQAAWMR*SAPTAS
Trigger: TGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGAGGGATTCATGGTATaGAGGATGTTCACAACCCCA +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSEGFMV*RMFTTP
Trigger: TGGGGTTGTGAACATCCTCCATACCATGAATCCCTC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGTCAAACCTGTCTCCATaGACAATCATGATATCAGGC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRSNLSP*TIMISG
Trigger: GCCTGATATCATGATTGTTCATGGAGACAGGTTTGA...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTCCCCACCTTCAATGTaGAGGATTCGGATGTTCATC +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVSPPSM*RIRMFI
Trigger: GATGAACATCCGAATCCTTCACATTGAAGGTGGGGA...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCTAGCCACATGCGAATaGTGCTCATGTAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLATCE*CSCSLC
Trigger: ACAAAGACTACATGAGCATCATTCGCATGTGGCTAG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGGGTCCGCTTGTTAAATaGGATAAGTGCATCCAATGT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRGPLVK*DKCIQC
Trigger: ACATTGGATGCACTTATCTCATTTAACAAGCGGACC...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCGTTTCTCTTCCAATCTaGCGTGTTCCCAGGTTGATC +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVVSLPI*RVPRLI
Trigger: GATCAACCTGGGAACACGTCAGATTGGAAGAGAAAC...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGTACTGTTTACCAAACTaGAGGTGCAGTGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRYCLPN*RCSACN
Trigger: ATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTA...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAATGGATATCAGGTGCTaGTCTGCACTGCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVMDIRC*SALRVQ
Trigger: CTGCACCCGCAGTGCAGAGCAGCACCTGATATCCAT...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATGGATATCAGGTGCTaGTCTGCACTGCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQMDIRC*SALRVQ
Trigger: CTGCACCCGCAGTGCAGAGCAGCACCTGATATCCAT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCACATGGATATCAGGTaGTGCTCTGCACTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQHMDIR*CSALRV
Trigger: CACCCGCAGTGCAGAGCAGCACCTGATATCCATGTG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGGACGTGTTTAACTaGACGAAAGTTGGGATGATG +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSWDVFN*TKVGMM
Trigger: CATCATCCCAACTTTCGTGCAGTTAAACACGTCCCA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCCTCGAACCCCACAGCTaGTGTTCCCAATCATACAGC +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFLEPHS*CSQSYS
Trigger: GCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAG...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGAAGGTGGCCCAGTTCTaGAGCACAGAAGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQKVAQF*STEGAS
Trigger: GGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACAAGGTGGCCCAGTTCTaGAGCACAGAAGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYKVAQF*STEGAS
Trigger: GGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTT...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGGCGTATGCTTCAATaGACCCATGGCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSRRMLQ*THGFHR
Trigger: CCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCT...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCCAGCTGTTCTTAGGATaGTCTGGGCCTTCGCATTGC +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFQLFLG*SGPSHC
Trigger: GCAATGCGAAGGCCCAGAGCATCCTAAGAACAGCTG...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAACGGAGGACAAGGCCTaGTGGCGAATGACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRTEDKA*WRMTSL
Trigger: CAAAGACGTCATTCGCCAGCAGGCCTTGTCCTCCGT...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGACGGAGGACAAGGCCTaGTGGCGAATGACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQTEDKA*WRMTSL
Trigger: CAAAGACGTCATTCGCCAGCAGGCCTTGTCCTCCGT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAACGGAGGACAAGGCCTaGTGGCGAATGACGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVTEDKA*WRMTSL
Trigger: CAAAGACGTCATTCGCCAGCAGGCCTTGTCCTCCGT...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGGCCCTGGAGATTACTaGAGGGCTGGCAGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSGPGDY*RAGRVL
Trigger: TAAAACTCTGCCAGCCCTGCAGTAATCTCCAGGGCC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCTACTGACTCCACCATaGCTGCCTCATCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQLLTPP*LPHLLP
Trigger: GGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCTACTGACTCCACCATaGCTGCCTCATCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYLLTPP*LPHLLP
Trigger: GGGGAGAAGATGAGGCAGCCATGGTGGAGTCAGTAG...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGAAAAGGATGCGATCATaGTCCTCACACATGGATATC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRKRMRS*SSHMDI
Trigger: GATATCCATGTGTGAGGACCATGATCGCATCCTTTT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGACAGAGTTCCACTCTTaGATCAGTTTGGTTGAATGC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRTEFHS*ISLVEC
Trigger: GCATTCAACCAAACTGATCCAAGAGTGGAACTCTGT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCGCTTCAATGCACCCATaGCTTCCACAGGAACAATCA +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFASMHP*LPQEQS
Trigger: TGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGC...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTGCAGCTTGGATGAGATaGAGCGCACCCACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFAAWMR*SAPTAS
Trigger: TGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGC...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCCAAGTTTCGCAGCTTaGATGAGATGGAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQPSFAA*MRWSAP
Trigger: GGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCGAGGACAAGGCCTGCTaGCGAATGACGTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFEDKAC*RMTSLT
Trigger: TGTCAAAGACGTCATTCGCCAGCAGGCCTTGTCCTC...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCGGGGGATATCTGAGATaGGGGAGTGATAGATATGTC +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFGGYLR*GSDRYV
Trigger: GACATATCTATCACTCCCCCATCTCAGATATCCCCC...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGGCTCTAAGTCCCAGTaGCTTCTCAGCTGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSGSKSQ*LLSCPK
Trigger: CTTAGGACAGCTGAGAAGCCACTGGGACTTAGAGCC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAGGTCCTTGAAAGCATaGCTCCCTCTGCAGATAACC +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFRSLKA*LPLQIT
Trigger: GGTTATCTGCAGAGGGAGTCATGCTTTCAAGGACCT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000543356.7
CDS-3UTR TCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTAGCCACATGCGAATaGTGCTCATGTAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFLATCE*CSCSLC
Trigger: ACAAAGACTACATGAGCATCATTCGCATGTGGCTAG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGGTCCGCTTGTTAAATaGGATAAGTGCATCCAATGT +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSGPLVK*DKCIQC
Trigger: ACATTGGATGCACTTATCTCATTTAACAAGCGGACC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGCACGAAAGTTGGGATaGTGCTCAATGCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSARKLG*CSMPFF
Trigger: GAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTACTGTTTACCAAACTaGAGGTGCAGTGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSYCLPN*RCSACN
Trigger: ATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTTGGATCAGTTTGGTTaGATGCAGCACAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLDQFG*MQHNSF
Trigger: GAAGGAATTGTGCTGCATTCAACCAAACTGATCCAA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCCTCATCTTTTGGCACTaGCATCCCTTCCACCAAGAG +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSLIFWH*HPFHQE
Trigger: CTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAG...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGGGTTTGAGCTAAAATaGCCCCTAGTAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSGFELK*PLVRRH
Trigger: ATGTCTTCTTACTAGGGGTCATTTTAGCTCAAACCC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCAGTATGAAAGGCTACTaGAGGAAGAAGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFSMKGY*RKKCLL
Trigger: CAGCAGACACTTCTTCCTTCAGTAGCCTTTCATACT...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATGGGCAGAGGTTGCATTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYGQRLH*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCTCAATGCAACCTCTGCCC...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAAGGGCAGAGGTTGCATTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEGQRLH*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCTCAATGCAACCTCTGCCC...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTTATCAGGTGCTGCTCTaGACTGCGGGTGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIYQVLL*TAGAAH
Trigger: GTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATA...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAGCCTGCCAAAAGGATaGGATCATGGTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFSLPKG*DHGPHT
Trigger: TGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCTGGGATGATGCTCAATaGCCTTCTTCCGCATCACTC +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSWDDAQ*PSSASL
Trigger: GAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCA...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTACTCGAACCCCACAGCTaGTGTTCCCAATCATACAGC +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVLEPHS*CSQSYS
Trigger: GCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAG...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCCTTCATGCTGACTATTaGAACTCGGAGGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSLHADY*NSEVRP
Trigger: GGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAG...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTTTTACAGCTTCTGCTaGAGCTTCCACACACATCTG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVFYSFC*SFHTHL
Trigger: CAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAA...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCTTTTACAGCTTCTGCTaGAGCTTCCACACACATCTG +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFFYSFC*SFHTHL
Trigger: CAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAA...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCATCAGTTTGGTTGAATaGAGCACAATTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSISLVE*STIPSR
Trigger: TCGGGAAGGAATTGTGCTGCATTCAACCAAACTGAT...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGAGGCGTATGCTTCAATaGACCCATGGCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQRRMLQ*THGFHR
Trigger: CCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGACAGCTGTTCTTAGGATaGTCTGGGCCTTCGCATTGC +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRQLFLG*SGPSHC
Trigger: GCAATGCGAAGGCCCAGAGCATCCTAAGAACAGCTG...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCAGGTCTAGTAGATCCTaGGTGTTGTGTAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFRSSRS*VLCSPE
Trigger: TTCTGGACTACACAACACGCAGGATCTACTAGACCT...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTCTGCCAAAGTCACCTaGAGTTCAATACCAGATTTG +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSSAKVT*SSIPDL
Trigger: CAAATCTGGTATTGAACTGCAGGTGACTTTGGCAGA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGCTGGAGTGCAGTGGTaGGGTCTCAGTTCACTGCCA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIAGVQW*GLSSLP
Trigger: TGGCAGTGAACTGAGACCGCACCACTGCACTCCAGC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATCACCCAGGGTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVSPRVE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCACCCTGGGTGA...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGCATGGTCCTCACACATaGATATCAGGTGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRHGPHT*ISGAAL
Trigger: CAGAGCAGCACCTGATATCCATGTGTGAGGACCATG...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGTATAAACTGGTCAAATaGGACGTGTTTAACTGCACG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRYKLVK*DVFNCT
Trigger: CGTGCAGTTAAACACGTCCCATTTGACCAGTTTATA...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCACAGAGTTCCACTCTTaGATCAGTTTGGTTGAATGC +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSTEFHS*ISLVEC
Trigger: GCATTCAACCAAACTGATCCAAGAGTGGAACTCTGT...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCGTTCTTAGGATGCTCTaGGCCTTCGCATTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFVLRML*AFALPS
Trigger: ACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAAC...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCAAGGGAGGGATTCATaGTATGGAGGATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFQGRDS*YGGCSQ
Trigger: TTGTGAACATCCTCCATACCATGAATCCCTCCCTTG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAGAGGACAAGGCCTGCTaGCGAATGACGTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSREDKAC*RMTSLT
Trigger: TGTCAAAGACGTCATTCGCCAGCAGGCCTTGTCCTC...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAGGCTCTAAGTCCCAGTaGCTTCTCAGCTGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRGSKSQ*LLSCPK
Trigger: CTTAGGACAGCTGAGAAGCCACTGGGACTTAGAGCC...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAAGCACAGAGGGACCTaGGATCAAACCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFKHRGT*DQTLSL
Trigger: TAGAGAGAGGGTTTGATCCCAGGTCCCTCTGTGCTT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGAAGCACAGAGGGACCTaGGATCAAACCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRKHRGT*DQTLSL
Trigger: TAGAGAGAGGGTTTGATCCCAGGTCCCTCTGTGCTT...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAACAATAACCAGGCCCTaGAGATTACTGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVTITRP*RLLQGW
Trigger: CCAGCCCTGCAGTAATCTCCAGGGCCTGGTTATTGT...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGAGCAGCTGTTTTCTTaGTTTAGCTGCCACGGAGCA +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSEQLFS*FSCHGA
Trigger: TGCTCCGTGGCAGCTAAACCAAGAAAACAGCTGCTC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543356.7
CDS-3UTR TCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCATCAATGGTCCCACTaGCTTCCCCACCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYHQWSH*LPHLQC
Trigger: ACATTGAAGGTGGGGAAGTCAGTGGGACCATTGATG...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTACATCAATGGTCCCACTaGCTTCCCCACCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVHQWSH*LPHLQC
Trigger: ACATTGAAGGTGGGGAAGTCAGTGGGACCATTGATG...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCATCAATGGTCCCACTaGCTTCCCCACCTTCAATGT +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQHQWSH*LPHLQC
Trigger: ACATTGAAGGTGGGGAAGTCAGTGGGACCATTGATG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCGTCTTTGTTCTTGGCTaGGAGAAGTTTGTCATAGGA +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFVFVLG*EKFVIG
Trigger: TCCTATGACAAACTTCTCTCAGCCAAGAACAAAGAC...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCGTCTTTGTTCTTGGCTaGGAGAAGTTTGTCATAGGA +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVVFVLG*EKFVIG
Trigger: TCCTATGACAAACTTCTCTCAGCCAAGAACAAAGAC...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGCACGAAAGTTGGGATaGTGCTCAATGCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQARKLG*CSMPFF
Trigger: GAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGTCAGCATCCCGGACATaGAGAACATTCTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQSASRT*RTFSPV
Trigger: AACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGA...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCTACTGTTTACCAAACTaGAGGTGCAGTGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFYCLPN*RCSACN
Trigger: ATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTA...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCTTTCACCCTTCATGCTaGCTATTGCAACTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFFHPSC*LLQLGG
Trigger: ACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAA...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTGTTTCGCAGCTTGGATaGGATGGAGCGCACCCACAG +
Preference number: 4 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICVSQLG*DGAHPQ
Trigger: CTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAAC...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATGTTTCGCAGCTTGGATaGGATGGAGCGCACCCACAG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYVSQLG*DGAHPQ
Trigger: CTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAAC...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCGTAACTTACAGGGTTTaGGCTAAAATGACCCCTAGT +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVVTYRV*AKMTPS
Trigger: ACTAGGGGTCATTTTAGCTCAAACCCTGTAAGTTAC...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCGTAACTTACAGGGTTTaGGCTAAAATGACCCCTAGT +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFVTYRV*AKMTPS
Trigger: ACTAGGGGTCATTTTAGCTCAAACCCTGTAAGTTAC...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACAACTTCAGGATGAAGTaGTATCCCAGGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYNFRMK*YPRQGL
Trigger: CAGGCCTTGCCTGGGATATCACTTCATCCTGAAGTT...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTATCACCATGGAATGTCTaGACAATAACCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVSPWNV*TITRPW
Trigger: CCAGGGCCTGGTTATTGTTCAGACATTCCATGGTGA...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATGGTGCTGCTCTGCACTaGGGGTGCAGCACACATGAT +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYGAALH*GCSTHD
Trigger: ATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACC...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCCTGCCAAAAGGATaGGATCATGGTCCTCACACA +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVSLPKG*DHGPHT
Trigger: TGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCT...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATAGGAAGGGCAGCCTaGCAAAAGGATGCGATCATG +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQIGRAA*QKDAIM
Trigger: CATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTAT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACATAGGAAGGGCAGCCTaGCAAAAGGATGCGATCATG +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYIGRAA*QKDAIM
Trigger: CATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTAT...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCATCTCTTTGCTCCCTaGGTCAATATTTGGAAACAG +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFHLFAP*VNIWKQ
Trigger: CTGTTTCCAAATATTGACGCAGGGAGCAAAGAGATG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACTGGGATGATGCTCAATaGCCTTCTTCCGCATCACTC +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYWDDAQ*PSSASL
Trigger: GAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCA...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGAAACTGAAGGTGCAGTaGTTGCAATATTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRKLKVQ*LQYFVL
Trigger: CAAGACAAAATATTGCAAGCACTGCACCTTCAGTTT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCTTCATGCTGACTATTaGAACTCGGAGGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYLHADY*NSEVRP
Trigger: GGGACGAACCTCCGAGTTGCAATAGTCAGCATGAAG...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCTACTCCCAAAATTCTaGAGTTCAGTTTTACAGCTT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRLLPKF*SSVLQL
Trigger: AAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTCTGCCAAAGTCACCTaGAGTTCAATACCAGATTTG +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVSAKVT*SSIPDL
Trigger: CAAATCTGGTATTGAACTGCAGGTGACTTTGGCAGA...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCAAAAGGATGCGATCATaGTCCTCACACATGGATATC +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVKRMRS*SSHMDI
Trigger: GATATCCATGTGTGAGGACCATGATCGCATCCTTTT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCATCATACAGCCAGCATaGGCAACCAACTGTATAAAC +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVIIQPA*ATNCIN
Trigger: GTTTATACAGTTGGTTGCCCATGCTGGCTGTATGAT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCACAGAGTTCCACTCTTaGATCAGTTTGGTTGAATGC +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFTEFHS*ISLVEC
Trigger: GCATTCAACCAAACTGATCCAAGAGTGGAACTCTGT...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACTCCAGTCCCTTTCCTTaGCCAAATTTCCTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYSSPFP*PNFLSA
Trigger: GGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGA...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCGCTTCAATGCACCCATaGCTTCCACAGGAACAATCA +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFASMHP*LPQEQS
Trigger: TGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGC...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACGTTCTTAGGATGCTCTaGGCCTTCGCATTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYVLRML*AFALPS
Trigger: ACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAAC...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAGTCCATGTCTGTTCCTaGAGGTCTAGTAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVVHVCS*RSSRSC
Trigger: GCAGGATCTACTAGACCTCCAGGAACAGACATGGAC...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGTCCATGTCTGTTCCTaGAGGTCTAGTAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQVHVCS*RSSRSC
Trigger: GCAGGATCTACTAGACCTCCAGGAACAGACATGGAC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTCAGGGTGGAGTGCAGTaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICQGGVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCACTGCACTCCACCCTG...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAGTTTCTCTTCCAATCTaGCGTGTTCCCAGGTTGATC +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVVSLPI*RVPRLI
Trigger: GATCAACCTGGGAACACGTCAGATTGGAAGAGAAAC...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACGTTTCTCTTCCAATCTaGCGTGTTCCCAGGTTGATC +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYVSLPI*RVPRLI
Trigger: GATCAACCTGGGAACACGTCAGATTGGAAGAGAAAC...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCTTTTGCAGTGGCTCTTaGAGATCGATAGATTTGAGA +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFFCSGS*RSIDLR
Trigger: TCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAA...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGATTTCACCCTTCATGCTaGCTATTGCAACTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRFHPSC*LLQLGG
Trigger: ACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAA...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCTGGATCAATTCATGCTaGTGGATAATTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFWINSC*WIIPPP
Trigger: CGGTGGTGGAATTATCCATCAGCATGAATTGATCCA...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCCTAAAGACAAGAACTTaGTTCCACTCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFLKTRT*FHSGAL
Trigger: CAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAG...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCATGCAAACTTCAGGATaGAGTGATATCCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFMQTSG*SDIPGK
Trigger: CTTGCCTGGGATATCACTTCATCCTGAAGTTTGCAT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGAAGTTTAGAATAATCTaGACGGTTACAAGTAGCAAC +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRKFRII*TVTSSN
Trigger: GTTGCTACTTGTAACCGTGCAGATTATTCTAAACTT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000642385.2
CDS-3UTR GCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGCTCTGCACTGCGGGTaGAGCACACATGATAATGAG +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIALHCG*STHDNE
Trigger: CTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATCACATGGATATCAGGTaGTGCTCTGCACTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYHMDIR*CSALRV
Trigger: CACCCGCAGTGCAGAGCAGCACCTGATATCCATGTG...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCTTTTACAGCTTCTGCTaGAGCTTCCACACACATCTG +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFFYSFC*SFHTHL
Trigger: CAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAA...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGTTTTACAGCTTCTGCTaGAGCTTCCACACACATCTG +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRFYSFC*SFHTHL
Trigger: CAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAA...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTAAGGCGTATGCTTCAATaGACCCATGGCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVRRMLQ*THGFHR
Trigger: CCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCT...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTTCTGGGCCTTCGCATTaGCAAGTTTCGCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQISGPSH*QVSQLG
Trigger: TCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGA...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCTCTATTATTGTAGCTaGTTTGGCACAGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRLYYCS*FGTENC
Trigger: ACAATTTTCTGTGCCAAAGCAGCTACAATAATAGAG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGAAGGAAGAAGTGTCTaGTGGTCAGTAGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPREGRSV*WSVAKI
Trigger: GATCTTTGCTACTGACCAGCAGACACTTCTTCCTTC...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTAGGCCCTGGAGATTACTaGAGGGCTGGCAGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVGPGDY*RAGRVL
Trigger: TAAAACTCTGCCAGCCCTGCAGTAATCTCCAGGGCC...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCACCAACTGTATAAACTaGTCAAATGGGACGTGTTTA +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSTNCIN*SNGTCL
Trigger: TAAACACGTCCCATTTGACCAGTTTATACAGTTGGT...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTATTACACGGCCACCTGTaGAAATGCCTACTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVLHGHL*KCLLPK
Trigger: TTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAA...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGCTTCAATGCACCCATaGCTTCCACAGGAACAATCA +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQASMHP*LPQEQS
Trigger: TGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATCCAAGTTTCGCAGCTTaGATGAGATGGAGCGCACCC +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYPSFAA*MRWSAP
Trigger: GGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGG...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTTGTGGATATAGTGACTaGCCAGGACTCCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQICGYSD*PGLRRG
Trigger: TCCTCTCCGGAGTCCTGGCCAGTCACTATATCCACA...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGAGGACAAGGCCTGCTaGCGAATGACGTCTTTGACA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIEDKAC*RMTSLT
Trigger: TGTCAAAGACGTCATTCGCCAGCAGGCCTTGTCCTC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGGGGGATATCTGAGATaGGGGAGTGATAGATATGTC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQGGYLR*GSDRYV
Trigger: GACATATCTATCACTCCCCCATCTCAGATATCCCCC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGCCTGATTCATGGCTCTaGGCTCTAGGTAAAACTCAA +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRPDSWL*ALGKTQ
Trigger: TTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGG...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGTCAAACCTGTCTCCATaGACAATCATGATATCAGGC +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRSNLSP*TIMISG
Trigger: GCCTGATATCATGATTGTTCATGGAGACAGGTTTGA...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGGTCCGCTTGTTAAATaGGATAAGTGCATCCAATGT +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRGPLVK*DKCIQC
Trigger: ACATTGGATGCACTTATCTCATTTAACAAGCGGACC...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTAGCACGAAAGTTGGGATaGTGCTCAATGCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVARKLG*CSMPFF
Trigger: GAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGC...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGACGTGTTCCCAGGTTaGTCACAGGTGTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIDVFPG*SQVFQK
Trigger: CTTTTGGAACACCTGTGATCAACCTGGGAACACGTC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTTCAGCATCCCGGACATaGAGAACATTCTCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQISASRT*RTFSPV
Trigger: AACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGA...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCTTGGATCAGTTTGGTTaGATGCAGCACAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFLDQFG*MQHNSF
Trigger: GAAGGAATTGTGCTGCATTCAACCAAACTGATCCAA...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGTGGATCAATTCATGCTaGTGGATAATTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQWINSC*WIIPPP
Trigger: CGGTGGTGGAATTATCCATCAGCATGAATTGATCCA...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACTGGATCAATTCATGCTaGTGGATAATTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYWINSC*WIIPPP
Trigger: CGGTGGTGGAATTATCCATCAGCATGAATTGATCCA...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGACTAAAGACAAGAACTTaGTTCCACTCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRLKTRT*FHSGAL
Trigger: CAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAG...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAATGCAAACTTCAGGATaGAGTGATATCCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRMQTSG*SDIPGK
Trigger: CTTGCCTGGGATATCACTTCATCCTGAAGTTTGCAT...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGAGCAGATTTCACCATaGGAGATTACACCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPREQISP*EITPKN
Trigger: GTTCTTTGGTGTAATCTCTCATGGTGAAATCTGCTC...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGATACCCTAGTGTGGTTTaGAATAATGAGCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRYPSVV*NNEQSS
Trigger: GCTGCTCTGCTCATTATTTCAAACCACACTAGGGTA...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543356.7
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATGCTCTGCACTGCGGGTaGAGCACACATGATAATGAG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYALHCG*STHDNE
Trigger: CTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGC...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTATAGGAAGGGCAGCCTaGCAAAAGGATGCGATCATG +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIIGRAA*QKDAIM
Trigger: CATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTAT...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGGGATGATGCTCAATaGCCTTCTTCCGCATCACTC +
Preference number: 4 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVWDDAQ*PSSASL
Trigger: GAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCA...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACTGGGACGTGTTTAACTaGACGAAAGTTGGGATGATG +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYWDVFN*TKVGMM
Trigger: CATCATCCCAACTTTCGTGCAGTTAAACACGTCCCA...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGATGGGACGTGTTTAACTaGACGAAAGTTGGGATGATG +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRWDVFN*TKVGMM
Trigger: CATCATCCCAACTTTCGTGCAGTTAAACACGTCCCA...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCAAACTGAAGGTGCAGTaGTTGCAATATTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RQELDSTQELWREGPCLFKLKVQ*LQYFVL
Trigger: CAAGACAAAATATTGCAAGCACTGCACCTTCAGTTT...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATAGGCGTATGCTTCAATaGACCCATGGCTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYRRMLQ*THGFHR
Trigger: CCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCT...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACAGGTCTAGTAGATCCTaGGTGTTGTGTAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYRSSRS*VLCSPE
Trigger: TTCTGGACTACACAACACGCAGGATCTACTAGACCT...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCTCTATTATTGTAGCTaGTTTGGCACAGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLYYCS*FGTENC
Trigger: ACAATTTTCTGTGCCAAAGCAGCTACAATAATAGAG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCACCAACTGTATAAACTaGTCAAATGGGACGTGTTTA +
Preference number: 4 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVTNCIN*SNGTCL
Trigger: TAAACACGTCCCATTTGACCAGTTTATACAGTTGGT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTTCCAGTCCCTTTCCTTaGCCAAATTTCCTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQISSPFP*PNFLSA
Trigger: GGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGA...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGTTCTTAGGATGCTCTaGGCCTTCGCATTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIVLRML*AFALPS
Trigger: ACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAAC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCAAGGGAGGGATTCATaGTATGGAGGATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQQGRDS*YGGCSQ
Trigger: TTGTGAACATCCTCCATACCATGAATCCCTCCCTTG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATTGTGGATATAGTGACTaGCCAGGACTCCGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYCGYSD*PGLRRG
Trigger: TCCTCTCCGGAGTCCTGGCCAGTCACTATATCCACA...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGTCCATGTCTGTTCCTaGAGGTCTAGTAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIVHVCS*RSSRSC
Trigger: GCAGGATCTACTAGACCTCCAGGAACAGACATGGAC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGCCACTGCGCCCAGCTaGAAGGATTATTATTATTAT +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSATAPS*KDYYYY
Trigger: ATAATAATAATAATCCTTCCAGCTGGGCGCAGTGGC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGACCTCTGTTCTCTGACTaGATCACCTTCTGTGATCTT +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRPLFSD*ITFCDL
Trigger: AAGATCACAGAAGGTGATCCAGTCAGAGAACAGAGG...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGACCTGATTCATGGCTCTaGGCTCTAGGTAAAACTCAA +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRPDSWL*ALGKTQ
Trigger: TTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGG...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATCCCCACCTTCAATGTaGAGGATTCGGATGTTCATC +
Preference number: 4 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVSPPSM*RIRMFI
Trigger: GATGAACATCCGAATCCTTCACATTGAAGGTGGGGA...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAGTCTTTGTTCTTGGCTaGGAGAAGTTTGTCATAGGA +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRVFVLG*EKFVIG
Trigger: TCCTATGACAAACTTCTCTCAGCCAAGAACAAAGAC...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTGACGTGTTCCCAGGTTaGTCACAGGTGTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICDVFPG*SQVFQK
Trigger: CTTTTGGAACACCTGTGATCAACCTGGGAACACGTC...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAAGACGTGTTCCCAGGTTaGTCACAGGTGTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEDVFPG*SQVFQK
Trigger: CTTTTGGAACACCTGTGATCAACCTGGGAACACGTC...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACTACTGTTTACCAAACTaGAGGTGCAGTGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYYCLPN*RCSACN
Trigger: ATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTA...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGATACTGTTTACCAAACTaGAGGTGCAGTGCTTGCAAT +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRYCLPN*RCSACN
Trigger: ATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTA...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCTTTTGCAGTGGCTCTTaGAGATCGATAGATTTGAGA +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSFCSGS*RSIDLR
Trigger: TCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAA...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAGGAGACCAAAAGTaGAAACATTTCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSRGDQK*KHFSAK
Trigger: TTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCT...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAGAGGAGACCAAAAGTaGAAACATTTCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFRGDQK*KHFSAK
Trigger: TTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGGGTTTGAGCTAAAATaGCCCCTAGTAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQGFELK*PLVRRH
Trigger: ATGTCTTCTTACTAGGGGTCATTTTAGCTCAAACCC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACGGGTTTGAGCTAAAATaGCCCCTAGTAAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYGFELK*PLVRRH
Trigger: ATGTCTTCTTACTAGGGGTCATTTTAGCTCAAACCC...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATAACTTCAGGATGAAGTaGTATCCCAGGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYNFRMK*YPRQGL
Trigger: CAGGCCTTGCCTGGGATATCACTTCATCCTGAAGTT...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTAACTTCAGGATGAAGTaGTATCCCAGGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICNFRMK*YPRQGL
Trigger: CAGGCCTTGCCTGGGATATCACTTCATCCTGAAGTT...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGAGCAGATTTCACCATaGGAGATTACACCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQEQISP*EITPKN
Trigger: GTTCTTTGGTGTAATCTCTCATGGTGAAATCTGCTC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCATCTCTTTGCTCCCTaGGTCAATATTTGGAAACAG +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQHLFAP*VNIWKQ
Trigger: CTGTTTCCAAATATTGACGCAGGGAGCAAAGAGATG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCACTCGAACCCCACAGCTaGTGTTCCCAATCATACAGC +
Preference number: 4 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPLEPHS*CSQSYS
Trigger: GCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAG...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAACATTCCAGAGGCGTATaGTTCAATGCACCCATGGCT +
Preference number: 4 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEHSRGV*FNAPMA
Trigger: AGCCATGGGTGCATTGAAGCATACGCCTCTGGAATG...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGAAAAGGATGCGATCATaGTCCTCACACATGGATATC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQKRMRS*SSHMDI
Trigger: GATATCCATGTGTGAGGACCATGATCGCATCCTTTT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACATCATACAGCCAGCATaGGCAACCAACTGTATAAAC +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYIIQPA*ATNCIN
Trigger: GTTTATACAGTTGGTTGCCCATGCTGGCTGTATGAT...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATCATACAGCCAGCATaGGCAACCAACTGTATAAAC +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQIIQPA*ATNCIN
Trigger: GTTTATACAGTTGGTTGCCCATGCTGGCTGTATGAT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAATCATACAGCCAGCATaGGCAACCAACTGTATAAAC +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVIIQPA*ATNCIN
Trigger: GTTTATACAGTTGGTTGCCCATGCTGGCTGTATGAT...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATTCCAGTCCCTTTCCTTaGCCAAATTTCCTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYSSPFP*PNFLSA
Trigger: GGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGA...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAAGTTCTTAGGATGCTCTaGGCCTTCGCATTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEVLRML*AFALPS
Trigger: ACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAAC...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGAGGGATTCATGGTATaGAGGATGTTCACAACCCCA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIEGFMV*RMFTTP
Trigger: TGGGGTTGTGAACATCCTCCATACCATGAATCCCTC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAAGTCCATGTCTGTTCCTaGAGGTCTAGTAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEVHVCS*RSSRSC
Trigger: GCAGGATCTACTAGACCTCCAGGAACAGACATGGAC...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAGATTACTGCAGGGCTaGCAGAGTTTTAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFRLLQG*QSFRNQ
Trigger: CTGATTCCTAAAACTCTGCCAGCCCTGCAGTAATCT...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTTCCCCACCTTCAATGTaGAGGATTCGGATGTTCATC +
Preference number: 4 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICSPPSM*RIRMFI
Trigger: GATGAACATCCGAATCCTTCACATTGAAGGTGGGGA...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACTTTTGCAGTGGCTCTTaGAGATCGATAGATTTGAGA +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYFCSGS*RSIDLR
Trigger: TCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAA...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGTTTTGCAGTGGCTCTTaGAGATCGATAGATTTGAGA +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQFCSGS*RSIDLR
Trigger: TCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAA...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTATTTTGCAGTGGCTCTTaGAGATCGATAGATTTGAGA +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVFCSGS*RSIDLR
Trigger: TCTCAAATCTATCGATCTTCAAGAGCCACTGCAAAA...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATTTTCACCCTTCATGCTaGCTATTGCAACTCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYFHPSC*LLQLGG
Trigger: ACCTCCGAGTTGCAATAGTCAGCATGAAGGGTGAAA...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTCTAAAGACAAGAACTTaGTTCCACTCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQILKTRT*FHSGAL
Trigger: CAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAG...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGAGAGGAGACCAAAAGTaGAAACATTTCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQRGDQK*KHFSAK
Trigger: TTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTGTAACTTACAGGGTTTaGGCTAAAATGACCCCTAGT +
Preference number: 4 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFVTYRV*AKMTPS
Trigger: ACTAGGGGTCATTTTAGCTCAAACCCTGTAAGTTAC...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGTTACTCAACACAGTATaGAAGGCTACTGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQLLNTV*KATEGR
Trigger: TCTTCCTTCAGTAGCCTTTCATACTGTGTTGAGTAA...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTATTACTCAACACAGTATaGAAGGCTACTGAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVLLNTV*KATEGR
Trigger: TCTTCCTTCAGTAGCCTTTCATACTGTGTTGAGTAA...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTCATCTCTTTGCTCCCTaGGTCAATATTTGGAAACAG +
Preference number: 4 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFHLFAP*VNIWKQ
Trigger: CTGTTTCCAAATATTGACGCAGGGAGCAAAGAGATG...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGGGACGTGTTTAACTaGACGAAAGTTGGGATGATG +
Preference number: 4 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVWDVFN*TKVGMM
Trigger: CATCATCCCAACTTTCGTGCAGTTAAACACGTCCCA...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGAAACTGAAGGTGCAGTaGTTGCAATATTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRKLKVQ*LQYFVL
Trigger: CAAGACAAAATATTGCAAGCACTGCACCTTCAGTTT...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTAGGTCTAGTAGATCCTaGGTGTTGTGTAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIRSSRS*VLCSPE
Trigger: TTCTGGACTACACAACACGCAGGATCTACTAGACCT...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGAAGGAAGAAGTGTCTaGTGGTCAGTAGCAAAGATC +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIEGRSV*WSVAKI
Trigger: GATCTTTGCTACTGACCAGCAGACACTTCTTCCTTC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAAAAGGATGCGATCATaGTCCTCACACATGGATATC +
Preference number: 4 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFKRMRS*SSHMDI
Trigger: GATATCCATGTGTGAGGACCATGATCGCATCCTTTT...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGTATAAACTGGTCAAATaGGACGTGTTTAACTGCACG +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQYKLVK*DVFNCT
Trigger: CGTGCAGTTAAACACGTCCCATTTGACCAGTTTATA...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAATTACACGGCCACCTGTaGAAATGCCTACTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYELHGHL*KCLLPK
Trigger: TTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAA...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATGAGGGATTCATGGTATaGAGGATGTTCACAACCCCA +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYEGFMV*RMFTTP
Trigger: TGGGGTTGTGAACATCCTCCATACCATGAATCCCTC...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTCAAGGGAGGGATTCATaGTATGGAGGATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIQGRDS*YGGCSQ
Trigger: TTGTGAACATCCTCCATACCATGAATCCCTCCCTTG...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCGCACTTAATAAGTGGTaGCAGTTAGTATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VISQARPEGLSGINTLVSALNKW*QLVFLP
Trigger: TGGAAGAAATACTAACTGCCACCACTTATTAAGTGC...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTTCAAACCTGTCTCCATaGACAATCATGATATCAGGC +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQISNLSP*TIMISG
Trigger: GCCTGATATCATGATTGTTCATGGAGACAGGTTTGA...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGTCTTTGTTCTTGGCTaGGAGAAGTTTGTCATAGGA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIVFVLG*EKFVIG
Trigger: TCCTATGACAAACTTCTCTCAGCCAAGAACAAAGAC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATTGGATCAATTCATGCTaGTGGATAATTCCACCACCG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYWINSC*WIIPPP
Trigger: CGGTGGTGGAATTATCCATCAGCATGAATTGATCCA...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAACTAAAGACAAGAACTTaGTTCCACTCAGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYELKTRT*FHSGAL
Trigger: CAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAG...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATATGCAAACTTCAGGATaGAGTGATATCCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYMQTSG*SDIPGK
Trigger: CTTGCCTGGGATATCACTTCATCCTGAAGTTTGCAT...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATTTTTACAGCTTCTGCTaGAGCTTCCACACACATCTG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYFYSFC*SFHTHL
Trigger: CAGATGTGTGTGGAAGCTGCAGCAGAAGCTGTAAAA...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCTACTCCCAAAATTCTaGAGTTCAGTTTTACAGCTT +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQLLPKF*SSVLQL
Trigger: AAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCTACTCCCAAAATTCTaGAGTTCAGTTTTACAGCTT +
Preference number: 4 (lower is better)
Translates to: EETKSENISLPKSPAVQYLLPKF*SSVLQL
Trigger: AAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAG...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGACTACTCCCAAAATTCTaGAGTTCAGTTTTACAGCTT +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRLLPKF*SSVLQL
Trigger: AAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAG...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTATCAGTTTGGTTGAATaGAGCACAATTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIISLVE*STIPSR
Trigger: TCGGGAAGGAATTGTGCTGCATTCAACCAAACTGAT...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTAGGTCTAGTAGATCCTaGGTGTTGTGTAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICRSSRS*VLCSPE
Trigger: TTCTGGACTACACAACACGCAGGATCTACTAGACCT...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATAGGTCTAGTAGATCCTaGGTGTTGTGTAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYRSSRS*VLCSPE
Trigger: TTCTGGACTACACAACACGCAGGATCTACTAGACCT...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTTCTGCCAAAGTCACCTaGAGTTCAATACCAGATTTG +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQISAKVT*SSIPDL
Trigger: CAAATCTGGTATTGAACTGCAGGTGACTTTGGCAGA...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATTTTTCTTGGTTTAGCTaGCACGGAGCAGTCACCAAT +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYFSWFS*HGAVTN
Trigger: ATTGGTGACTGCTCCGTGGCAGCTAAACCAAGAAAA...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543356.7
CDS-3UTR CCA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGACCAACTGTATAAACTaGTCAAATGGGACGTGTTTA +
Preference number: 4 (lower is better)
Translates to: ETKSENISLPKSPAVQYQTNCIN*SNGTCL
Trigger: TAAACACGTCCCATTTGACCAGTTTATACAGTTGGT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCATTACACGGCCACCTGTaGAAATGCCTACTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPLHGHL*KCLLPK
Trigger: TTTTGGGAGTAGGCATTTCCACAGGTGGCCGTGTAA...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCAGAGGGATTCATGGTATaGAGGATGTTCACAACCCCA +
Preference number: 4 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPEGFMV*RMFTTP
Trigger: TGGGGTTGTGAACATCCTCCATACCATGAATCCCTC...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTCAAGGGAGGGATTCATaGTATGGAGGATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICQGRDS*YGGCSQ
Trigger: TTGTGAACATCCTCCATACCATGAATCCCTCCCTTG...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATCCTCTGTTCTCTGACTaGATCACCTTCTGTGATCTT +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYPLFSD*ITFCDL
Trigger: AAGATCACAGAAGGTGATCCAGTCAGAGAACAGAGG...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAGCACTTAATAAGTGGTaGCAGTTAGTATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: EVISQARPEGLSGINTLVALNKW*QLVFLP
Trigger: TGGAAGAAATACTAACTGCCACCACTTATTAAGTGC...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATAGATTACTGCAGGGCTaGCAGAGTTTTAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYRLLQG*QSFRNQ
Trigger: CTGATTCCTAAAACTCTGCCAGCCCTGCAGTAATCT...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCACTAGCCACATGCGAATaGTGCTCATGTAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPLATCE*CSCSLC
Trigger: ACAAAGACTACATGAGCATCATTCGCATGTGGCTAG...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTAGAGGAGACCAAAAGTaGAAACATTTCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIRGDQK*KHFSAK
Trigger: TTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCT...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR TCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTAGCAATGCAATTGTCTaGTGTACAGAGCAGATTTCA +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQISNAIV*CTEQIS
Trigger: TGAAATCTGCTCTGTACATCAGACAATTGCATTGCT...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAAAGTTTAGAATAATCTaGACGGTTACAAGTAGCAAC +
Preference number: 4 (lower is better)
Translates to: ISQARPEGLSGINTLVSRKFRII*TVTSSN
Trigger: GTTGCTACTTGTAACCGTGCAGATTATTCTAAACTT...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAAATCAGTTTGGTTGAATaGAGCACAATTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEISLVE*STIPSR
Trigger: TCGGGAAGGAATTGTGCTGCATTCAACCAAACTGAT...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATATCAGTTTGGTTGAATaGAGCACAATTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYISLVE*STIPSR
Trigger: TCGGGAAGGAATTGTGCTGCATTCAACCAAACTGAT...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTTATAAACTGGTCAAATaGGACGTGTTTAACTGCACG +
Preference number: 4 (lower is better)
Translates to: TKSENISLPKSPAVQYQIYKLVK*DVFNCT
Trigger: CGTGCAGTTAAACACGTCCCATTTGACCAGTTTATA...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAAACAGAGTTCCACTCTTaGATCAGTTTGGTTGAATGC +
Preference number: 4 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYETEFHS*ISLVEC
Trigger: GCATTCAACCAAACTGATCCAAGAGTGGAACTCTGT...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCACAAGGGAGGGATTCATaGTATGGAGGATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPQGRDS*YGGCSQ
Trigger: TTGTGAACATCCTCCATACCATGAATCCCTCCCTTG...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR TCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATAGAGGAGACCAAAAGTaGAAACATTTCTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYRGDQK*KHFSAK
Trigger: TTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCT...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATTATAAACTGGTCAAATaGGACGTGTTTAACTGCACG +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYYKLVK*DVFNCT
Trigger: CGTGCAGTTAAACACGTCCCATTTGACCAGTTTATA...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATCTCTGTACCCTAGTGTaGTTTGAAATAATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYLCTLV*FEIMSR
Trigger: TCTGCTCATTATTTCAAACCACACTAGGGTACAGAG...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543356.7
CDS-3UTR TCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCAAGCAATGCAATTGTCTaGTGTACAGAGCAGATTTCA +
Preference number: 4 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPSNAIV*CTEQIS
Trigger: TGAAATCTGCTCTGTACATCAGACAATTGCATTGCT...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATCTACTCCCAAAATTCTaGAGTTCAGTTTTACAGCTT +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYLLPKF*SSVLQL
Trigger: AAGCTGTAAAACTGAACTGCAGAATTTTGGGAGTAG...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCATATAAACTGGTCAAATaGGACGTGTTTAACTGCACG +
Preference number: 4 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPYKLVK*DVFNCT
Trigger: CGTGCAGTTAAACACGTCCCATTTGACCAGTTTATA...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATACCAACTGTATAAACTaGTCAAATGGGACGTGTTTA +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYTNCIN*SNGTCL
Trigger: TAAACACGTCCCATTTGACCAGTTTATACAGTTGGT...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR GCA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCAAAACTGAAGGTGCAGTaGTTGCAATATTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPKLKVQ*LQYFVL
Trigger: CAAGACAAAATATTGCAAGCACTGCACCTTCAGTTT...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR GCA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATCTCTATTATTGTAGCTaGTTTGGCACAGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYLYYCS*FGTENC
Trigger: ACAATTTTCTGTGCCAAAGCAGCTACAATAATAGAG...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp GGGCCAAGAACCCCAGGTCAGAGAACGAGAGGCTTGCTGCCATCTTaGAAGCAACCCGCCACCATGTTGGGAGCTCTGGGAGCAAGGACC +
Preference number: 5 (lower is better)
Translates to: GPRTPGQRTRGLLPS*KQPATMLGALGART
Trigger: GGTCCTTGCTCCCAGAGCTCCCAACATGGTGGCGGGTTGCTTCCAAGATGGCAGCAAGCCTCTCGTTCTCTGACCTGGGGTTCTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS GCA 90 bp AGCAGGGCGGGGTCAACCAAATCCGAAACCACCACATCCACGTCCTaGACGGAGGACAAGGCCTGCTGGCGAATGACGTCTTTGACAATG +
Preference number: 5 (lower is better)
Translates to: SRAGSTKSETTTSTS*TEDKACWRMTSLTM
Trigger: CATTGTCAAAGACGTCATTCGCCAGCAGGCCTTGTCCTCCGTGCAGGACGTGGATGTGGTGGTTTCGGATTTGGTTGACCCCGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp TGGAGGTCTAGTAGATCCTGCGTGTTGTGTAGTCCAGAACCATGCTaGCAGCACCCAGCAGGGCGGGGTCAACCAAATCCGAAACCACCA +
Preference number: 5 (lower is better)
Translates to: WRSSRSCVLCSPEPC*QHPAGRGQPNPKPP
Trigger: TGGTGGTTTCGGATTTGGTTGACCCCGCCCTGCTGGGTGCTGCCAGCATGGTTCTGGACTACACAACACGCAGGATCTACTAGACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 90 bp TCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGTCTAGTAGATCCTaGGTGTTGTGTAGTCCAGAACCATGCTGGCAGCACCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SGEKVHVCSWRSSRS*VLCSPEPCWQHPAG
Trigger: CCCTGCTGGGTGCTGCCAGCATGGTTCTGGACTACACAACACGCAGGATCTACTAGACCTCCAGGAACAGACATGGACCTTCTCTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp AGGAAGGGCAGCCTGCCAAAAGGATGCGATCATGGTCCTCACACATaGATATCAGGTGCTGCTCTGCACTGCGGGTGCAGCACACATGAT +
Preference number: 5 (lower is better)
Translates to: RKGSLPKGCDHGPHT*ISGAALHCGCSTHD
Trigger: ATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp ATGCTCTGGGCCTTCGCATTGCCAAGTTTCGCAGCTTGGATGAGATaGAGCGCACCCACAGCCTCATCTTTTGGCACTGACATCCCTTCC +
Preference number: 5 (lower is better)
Translates to: MLWAFALPSFAAWMR*SAPTASSFGTDIPS
Trigger: GGAAGGGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 90 bp TTAGGATGCTCTGGGCCTTCGCATTGCCAAGTTTCGCAGCTTGGATaGGATGGAGCGCACCCACAGCCTCATCTTTTGGCACTGACATCC +
Preference number: 5 (lower is better)
Translates to: LGCSGPSHCQVSQLG*DGAHPQPHLLALTS
Trigger: GGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp GTTCTTAGGATGCTCTGGGCCTTCGCATTGCCAAGTTTCGCAGCTTaGATGAGATGGAGCGCACCCACAGCCTCATCTTTTGGCACTGAC +
Preference number: 5 (lower is better)
Translates to: VLRMLWAFALPSFAA*MRWSAPTASSFGTD
Trigger: GTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp CTGGCCAGGACTCCGGAGAGGATCACAAGGGAGGGATTCATGGTATaGAGGATGTTCACAACCCCAAGACCCAAAGCTGTTCCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: LARTPERITREGFMV*RMFTTPRPKAVPAV
Trigger: AACAGCTGGAACAGCTTTGGGTCTTGGGGTTGTGAACATCCTCCATACCATGAATCCCTCCCTTGTGATCCTCTCCGGAGTCCTGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp AGTGACTGGCCAGGACTCCGGAGAGGATCACAAGGGAGGGATTCATaGTATGGAGGATGTTCACAACCCCAAGACCCAAAGCTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SDWPGLRRGSQGRDS*YGGCSQPQDPKLFQ
Trigger: CTGGAACAGCTTTGGGTCTTGGGGTTGTGAACATCCTCCATACCATGAATCCCTCCCTTGTGATCCTCTCCGGAGTCCTGGCCAGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGGCCAAGTTTCGCAGCTaGGATGAGATGGAGCGCACC +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRAKFRS*DEMERT
Trigger: GGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGC...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCGGGGCAGAGGTTGCATaGAGCCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RQELDSTQELWREGPCLFGAEVA*SHCTPA
Trigger: GGCTGGAGTGCAGTGGCTCAATGCAACCTCTGCCCC...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS CCA 90 bp TATAACATTCACCGCATGGCCCAAGATTCCATTCCTTGGAATCCGTaGGGCCAAGAACCCCAGGTCAGAGAACGAGAGGCTTGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: YNIHRMAQDSIPWNP*GQEPQVREREACCH
Trigger: ATGGCAGCAAGCCTCTCGTTCTCTGACCTGGGGTTCTTGGCCCCACGGATTCCAAGGAATGGAATCTTGGGCCATGCGGTGAATGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGCCAGGGCAGCACAGTaGCCATCATTGTCTACCCAC +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSARAAQ*PSLSTH
Trigger: GTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCGCCAAGTTTCGCAGCTaGGATGAGATGGAGCGCACC +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSAKFRS*DEMERT
Trigger: GGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGC...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 90 bp GGGGGTCCTAAGGTCCACAGAGTTCCACTCTTGGATCAGTTTGGTTaGATGCAGCACAATTCCTTCCCGAGGATTTACACGGCCACCTGT +
Preference number: 5 (lower is better)
Translates to: GGPKVHRVPLLDQFG*MQHNSFPRIYTATC
Trigger: ACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 90 bp AGCTTGGATGAGATGGAGCGCACCCACAGCCTCATCTTTTGGCACTaGCATCCCTTCCACCAAGAGCAGGTCCTCATCATGGAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SLDEMERTHSLIFWH*HPFHQEQVLIMELF
Trigger: AAAAAGCTCCATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 90 bp TGGCTGAGAGAAGTTTGTCATAGGAAGGGCAGCCTGCCAAAAGGATaGGATCATGGTCCTCACACATGGATATCAGGTGCTGCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: WLREVCHRKGSLPKG*DHGPHTWISGAALH
Trigger: GTGCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 90 bp GGAACAATCAGGCCCATCCAGAGACACAACAAGGTGGCCCAGTTCTaGAGCACAGAAGGAGCTTCCGTGGATCAATTCATGCTGATGGAT +
Preference number: 5 (lower is better)
Translates to: GTIRPIQRHNKVAQF*STEGASVDQFMLMD
Trigger: ATCCATCAGCATGAATTGATCCACGGAAGCTCCTTCTGTGCTGCAGAACTGGGCCACCTTGTTGTGTCTCTGGATGGGCCTGATTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGGCACAGTTGCCATCATaGTCTACCCACACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRAQLPS*STHTGR
Trigger: TCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGC...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCGCCAAGTTTCGCAGCTaGGATGAGATGGAGCGCACC +
Preference number: 5 (lower is better)
Translates to: RQELDSTQELWREGPCLFAKFRS*DEMERT
Trigger: GGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGC...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCCTCTGGGCCTTCGCATaGCCAAGTTTCGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVLWAFA*PSFAAW
Trigger: CCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAG...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTCTGGGCCTTCGCATaGCCAAGTTTCGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: RQELDSTQELWREGPCLFLWAFA*PSFAAW
Trigger: CCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGACTCGAACCATCTCTTaGCTCCCTAGCCACATGCGA +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRTRTIS*LPSHMR
Trigger: TCGCATGTGGCTAGGGAGCAAAGAGATGGTTCGAGT...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539208.5
CDS TCA 90 bp AAGGCAGCAGATGTGGCCAGAGCCAGGGCATCAAACCTGTCTCCATaGACAATCATGATATCAGGCTTCAGGCGATTAAGGACATCTGGC +
Preference number: 5 (lower is better)
Translates to: KAADVARARASNLSP*TIMISGFRRLRTSG
Trigger: GCCAGATGTCCTTAATCGCCTGAAGCCTGATATCATGATTGTTCATGGAGACAGGTTTGATGCCCTGGCTCTGGCCACATCTGCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 90 bp CTGATAGAGTCATCAATGGTCCCACTGACTTCCCCACCTTCAATGTaGAGGATTCGGATGTTCATCAAGGCAGCAGATGTGGCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LIESSMVPLTSPPSM*RIRMFIKAADVARA
Trigger: GGCTCTGGCCACATCTGCTGCCTTGATGAACATCCGAATCCTTCACATTGAAGGTGGGGAAGTCAGTGGGACCATTGATGACTCTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 90 bp GTCCCTTTCCTTGGCCAAATTTCCTTTCCGCCAGGGCAGCACAGTTaGCATCATTGTCTACCCACACAGGGAGATGCAAAGTGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: VPFLGQISFPPGQHS*HHCLPTQGDAKCQK
Trigger: TTTCTGACACTTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp TTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTaGAGGTCTAGTAGATCCTGCGTGTTGTGTAGTCCAGAACCATGC +
Preference number: 5 (lower is better)
Translates to: LIPLRSSGEKVHVCS*RSSRSCVLCSPEPC
Trigger: GCATGGTTCTGGACTACACAACACGCAGGATCTACTAGACCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGGGGCAGAGGTTGCATaGAGCCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ETKSENISLPKSPAVQYQGAEVA*SHCTPA
Trigger: GGCTGGAGTGCAGTGGCTCAATGCAACCTCTGCCCC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS GCA 90 bp TGCGATCATGGTCCTCACACATGGATATCAGGTGCTGCTCTGCACTaGGGGTGCAGCACACATGATAATGAGCCAGTTTTGTTATGGCAT +
Preference number: 5 (lower is better)
Translates to: CDHGPHTWISGAALH*GCSTHDNEPVLLWH
Trigger: ATGCCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 90 bp GTCCTAAGGTCCACAGAGTTCCACTCTTGGATCAGTTTGGTTGAATaGAGCACAATTCCTTCCCGAGGATTTACACGGCCACCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: VLRSTEFHSWISLVE*STIPSRGFTRPPVE
Trigger: TTCCACAGGTGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGCCAGGGCAGCACAGTaGCCATCATTGTCTACCCAC +
Preference number: 5 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRARAAQ*PSLSTH
Trigger: GTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGC...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTTCCAGTCCCTTTCCTaGGCCAAATTTCCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSFQSLS*AKFPFR
Trigger: GCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCGCCAAGTTTCGCAGCTaGGATGAGATGGAGCGCACC +
Preference number: 5 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFAKFRS*DEMERT
Trigger: GGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGC...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCCTCTGGGCCTTCGCATaGCCAAGTTTCGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: VISQARPEGLSGINTLVSLWAFA*PSFAAW
Trigger: CCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAG...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCAGTAGATCCTGCGTGTaGTGTAGTCCAGAACCATGC +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSSRSCV*CSPEPC
Trigger: GCATGGTTCTGGACTACACAACACGCAGGATCTACT...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 90 bp AAGGATGCGATCATGGTCCTCACACATGGATATCAGGTGCTGCTCTaGACTGCGGGTGCAGCACACATGATAATGAGCCAGTTTTGTTAT +
Preference number: 5 (lower is better)
Translates to: KDAIMVLTHGYQVLL*TAGAAHMIMSQFCY
Trigger: ATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp CCTGTGCCTGTGATAAGTGTAACAAAGTTTTCCAGTCCCTTTCCTTaGCCAAATTTCCTTTCCGCCAGGGCAGCACAGTTGCCATCATTG +
Preference number: 5 (lower is better)
Translates to: PVPVISVTKFSSPFP*PNFLSARAAQLPSL
Trigger: CAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGCTGAAGGTGCAGTGCTaGCAATATTTTGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRLKVQC*QYFVLG
Trigger: ACCCAAGACAAAATATTGCAAGCACTGCACCTTCAG...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTTCCAGTCCCTTTCCTaGGCCAAATTTCCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVFQSLS*AKFPFR
Trigger: GCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAA...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCTCTGGGCCTTCGCATaGCCAAGTTTCGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: ETKSENISLPKSPAVQYQLWAFA*PSFAAW
Trigger: CCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGGAGGTTCTGTGATCTTAGTTaGGGGTTAGAGGAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: NLIPLRSSGEKVHVCSWRFCDLS*GLEEEG
Trigger: TCCTTCCTCCTCTAACCCCAAACTAAGATCACAGAA...CCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS TCA 90 bp ATAGGTTTCCATCCCGAAGCACGAGCTCTGTACCCTAGTGTGGTTTaGAATAATGAGCAGAGCAGCTGTTTTCTTGGTTTAGCTGCCACG +
Preference number: 5 (lower is better)
Translates to: IGFHPEARALYPSVV*NNEQSSCFLGLAAT
Trigger: CGTGGCAGCTAAACCAAGAAAACAGCTGCTCTGCTCATTATTTCAAACCACACTAGGGTACAGAGCTCGTGCTTCGGGATGGAAACCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543356.7
CDS CCA 90 bp ACTTCTCGAACCCCACAGCTGCTGTTCCCAATCATACAGCCAGCATaGGCAACCAACTGTATAAACTGGTCAAATGGGACGTGTTTAACT +
Preference number: 5 (lower is better)
Translates to: TSRTPQLLFPIIQPA*ATNCINWSNGTCLT
Trigger: AGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCACTCGAACCATCTCTTaGCTCCCTGCGTCAATATTT +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSTRTIS*LPASIF
Trigger: AAATATTGACGCAGGGAGCAAAGAGATGGTTCGAGT...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCCTAAAGACAAGAACTaGATTCCACTCAGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSPKDKN*IPLRSS
Trigger: AGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 90 bp ATGGGCAACCAACTGTATAAACTGGTCAAATGGGACGTGTTTAACTaGACGAAAGTTGGGATGATGCTCAATGCCCTTCTTCCGCATCAC +
Preference number: 5 (lower is better)
Translates to: MGNQLYKLVKWDVFN*TKVGMMLNALLPHH
Trigger: GTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCAGGACTAGGGTCCGCTaGTTAAATGAGATAAGTGCA +
Preference number: 5 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVRTRVR*LNEISA
Trigger: TGCACTTATCTCATTTAACAAGCGGACCCTAGTCCT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCTCCCTGCGTCAATATTaGGAAACAGGACTAGGGTCC +
Preference number: 5 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFSLRQY*ETGLGS
Trigger: GGACCCTAGTCCTGTTTCCAAATATTGACGCAGGGA...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCACTCGAACCATCTCTTaGCTCCCTGCGTCAATATTT +
Preference number: 5 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVTRTIS*LPASIF
Trigger: AAATATTGACGCAGGGAGCAAAGAGATGGTTCGAGT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTGAAGGTGCAGTGCTaGCAATATTTTGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: RQELDSTQELWREGPCLFLKVQC*QYFVLG
Trigger: ACCCAAGACAAAATATTGCAAGCACTGCACCTTCAG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCCTGAAGGTGCAGTGCTaGCAATATTTTGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVLKVQC*QYFVLG
Trigger: ACCCAAGACAAAATATTGCAAGCACTGCACCTTCAG...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCTTTTGCAGTGGCTCTaGAAGATCGATAGATTTGAG +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLLQWL*KIDRFE
Trigger: CTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCTTGGATCAGTTTGGTaGAATGCAGCACAATTCCTT +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSLGSVW*NAAQFL
Trigger: AAGGAATTGTGCTGCATTCAACCAAACTGATCCAAG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACGCACAGTTGCCATCATaGTCTACCCACACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: EETKSENISLPKSPAVQYAQLPS*STHTGR
Trigger: TCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGC...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTAGCCAGGGCAGCACAGTaGCCATCATTGTCTACCCAC +
Preference number: 5 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVARAAQ*PSLSTH
Trigger: GTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGC...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTGCCAAGTTTCGCAGCTaGGATGAGATGGAGCGCACC +
Preference number: 5 (lower is better)
Translates to: TKSENISLPKSPAVQYQIAKFRS*DEMERT
Trigger: GGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGC...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAGTAGATCCTGCGTGTaGTGTAGTCCAGAACCATGC +
Preference number: 5 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFSRSCV*CSPEPC
Trigger: GCATGGTTCTGGACTACACAACACGCAGGATCTACT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCTAAAGACAAGAACTaGATTCCACTCAGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: RQELDSTQELWREGPCLFPKDKN*IPLRSS
Trigger: AGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 90 bp ATAAACTGGTCAAATGGGACGTGTTTAACTGCACGAAAGTTGGGATaGTGCTCAATGCCCTTCTTCCGCATCACTCGAACCATCTCTTTG +
Preference number: 5 (lower is better)
Translates to: INWSNGTCLTARKLG*CSMPFFRITRTISL
Trigger: CAAAGAGATGGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 90 bp AATCATACAGCCAGCATGGGCAACCAACTGTATAAACTGGTCAAATaGGACGTGTTTAACTGCACGAAAGTTGGGATGATGCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: NHTASMGNQLYKLVK*DVFNCTKVGMMLNA
Trigger: GGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTTCTCCATGATTTGCTaGTTTCGTTTTGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSFSMIC*FRFERF
Trigger: GAACCTCTCAAAACGAAACAAGCAAATCATGGAGAA...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000642385.2
CDS-3UTR CAA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTATCCCTGCGTCAATATTaGGAAACAGGACTAGGGTCC +
Preference number: 5 (lower is better)
Translates to: EVISQARPEGLSGINTLVSLRQY*ETGLGS
Trigger: GGACCCTAGTCCTGTTTCCAAATATTGACGCAGGGA...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTTTTGCAGTGGCTCTaGAAGATCGATAGATTTGAG +
Preference number: 5 (lower is better)
Translates to: RQELDSTQELWREGPCLFLLQWL*KIDRFE
Trigger: CTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAG...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCCACTCTTGGATCAGTTaGGTTGAATGCAGCACAATT +
Preference number: 5 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVHSWIS*VECSTI
Trigger: AATTGTGCTGCATTCAACCAAACTGATCCAAGAGTG...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTCTCTGGGCCTTCGCATaGCCAAGTTTCGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICLWAFA*PSFAAW
Trigger: CCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAG...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGAGTAGATCCTGCGTGTaGTGTAGTCCAGAACCATGC +
Preference number: 5 (lower is better)
Translates to: ETKSENISLPKSPAVQYQSRSCV*CSPEPC
Trigger: GCATGGTTCTGGACTACACAACACGCAGGATCTACT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGTAGATCCTGCGTGTaGTGTAGTCCAGAACCATGC +
Preference number: 5 (lower is better)
Translates to: EVISQARPEGLSGINTLVSRSCV*CSPEPC
Trigger: GCATGGTTCTGGACTACACAACACGCAGGATCTACT...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp AGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCGATATGTCCAGTGTCTaGATTGTGGTGATGCTTTCA +
Preference number: 5 (lower is better)
Translates to: RQELDSTQELWREGPCLFDMSSV*IVVMLS
Trigger: TGAAAGCATCACCACAATCAAGACACTGGACATATC...GAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCACTCGAACCATCTCTTaGCTCCCTGCGTCAATATTT +
Preference number: 5 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFTRTIS*LPASIF
Trigger: AAATATTGACGCAGGGAGCAAAGAGATGGTTCGAGT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAGTGCTTGCAATATTTaGTCTTGGGTGTCAGCATCC +
Preference number: 5 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFSACNI*SWVSAS
Trigger: GGATGCTGACACCCAAGACAAAATATTGCAAGCACT...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCCATCCCCATATATCTTaGAACAAGGGTACTGTTTAC +
Preference number: 5 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVHPHIS*NKGTVY
Trigger: GTAAACAGTACCCTTGTTCAAAGATATATGGGGATG...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CCTAAAGACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCAAAGCAGAATTTCTTTaGCAGTGGCTCTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: PKDKNLIPLRSSGEKVHVKAEFL*QWLLKI
Trigger: GATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTT...GACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTAGCACAGTTGCCATCATaGTCTACCCACACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: LGKTQNFNGHPRVLLNTVAQLPS*STHTGR
Trigger: TCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGC...TACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTTTCCAGTCCCTTTCCTaGGCCAAATTTCCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFFQSLS*AKFPFR
Trigger: GCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAA...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCCCTAAAGACAAGAACTaGATTCCACTCAGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFPKDKN*IPLRSS
Trigger: AGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GACAAGAACTTGATTCCACTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCCCAGAACTTTGGCTTTaGTATTTTGACACCAATGAA +
Preference number: 5 (lower is better)
Translates to: DKNLIPLRSSGEKVHVCSPELWL*YFDTNE
Trigger: TTCATTGGTGTCAAAATACAAAAGCCAAAGTTCTGG...GGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAGTGGAATCAAGTTCTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS TCA 90 bp CTTTCGGTTATTTCCATTCTTCTCCATGATTTGCTTGTTTCGTTTTaGGAGGTTCTTAAAATAGAGTTCCAGACGCCGTCAGAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LSVISILLHDLLVSF*EVLKIEFQTPSEAP
Trigger: GGGAGCCTCTGACGGCGTCTGGAACTCTATTTTAAGAACCTCTCAAAACGAAACAAGCAAATCATGGAGAAGAATGGAAATAACCGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642385.2
CDS-3UTR CAA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGGACTAGGGTCCGCTaGTTAAATGAGATAAGTGCA +
Preference number: 5 (lower is better)
Translates to: EVISQARPEGLSGINTLVRTRVR*LNEISA
Trigger: TGCACTTATCTCATTTAACAAGCGGACCCTAGTCCT...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACAGTGCTTGCAATATTTaGTCTTGGGTGTCAGCATCC +
Preference number: 5 (lower is better)
Translates to: EETKSENISLPKSPAVQYSACNI*SWVSAS
Trigger: GGATGCTGACACCCAAGACAAAATATTGCAAGCACT...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGAGTGCTTGCAATATTTaGTCTTGGGTGTCAGCATCC +
Preference number: 5 (lower is better)
Translates to: ETKSENISLPKSPAVQYQSACNI*SWVSAS
Trigger: GGATGCTGACACCCAAGACAAAATATTGCAAGCACT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCTGAAGGTGCAGTGCTaGCAATATTTTGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: EETKSENISLPKSPAVQYLKVQC*QYFVLG
Trigger: ACCCAAGACAAAATATTGCAAGCACTGCACCTTCAG...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCCTTTTGCAGTGGCTCTaGAAGATCGATAGATTTGAG +
Preference number: 5 (lower is better)
Translates to: VISQARPEGLSGINTLVSLLQWL*KIDRFE
Trigger: CTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAG...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATGCACAGTTGCCATCATaGTCTACCCACACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYAQLPS*STHTGR
Trigger: TCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGC...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAATGGACACCCTAGGTTGGTAGCAATGCAATaGTCTGATGTACAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: DSWLWALGKTQNFNGHPRLVAMQ*SDVQSR
Trigger: TCTGCTCTGTACATCAGACAATTGCATTGCTACCAA...CCTAGGGTGTCCATTAAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS GCA 90 bp TTCGGTTTTAATGCCAAACATGATCGGGGCAAGTTTAGAATAATCTaGACGGTTACAAGTAGCAACACAAACCCGCAGCTTTCGGTTATT +
Preference number: 5 (lower is better)
Translates to: FGFNAKHDRGKFRII*TVTSSNTNPQLSVI
Trigger: AATAACCGAAAGCTGCGGGTTTGTGTTGCTACTTGTAACCGTGCAGATTATTCTAAACTTGCCCCGATCATGTTTGGCATTAAAACCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000642385.2
CDS-3UTR CAA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAATCCCTGCGTCAATATTaGGAAACAGGACTAGGGTCC +
Preference number: 5 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYESLRQY*ETGLGS
Trigger: GGACCCTAGTCCTGTTTCCAAATATTGACGCAGGGA...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTAGTGCTTGCAATATTTaGTCTTGGGTGTCAGCATCC +
Preference number: 5 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFSACNI*SWVSAS
Trigger: GGATGCTGACACCCAAGACAAAATATTGCAAGCACT...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGACTTTTGCAGTGGCTCTaGAAGATCGATAGATTTGAG +
Preference number: 5 (lower is better)
Translates to: ISQARPEGLSGINTLVSRLLQWL*KIDRFE
Trigger: CTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAG...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAAAGCAGAATTTCTTTaGCAGTGGCTCTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: VISQARPEGLSGINTLVSKAEFL*QWLLKI
Trigger: GATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTT...GCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTACTTGGATCAGTTTGGTaGAATGCAGCACAATTCCTT +
Preference number: 5 (lower is better)
Translates to: EVISQARPEGLSGINTLVLGSVW*NAAQFL
Trigger: AAGGAATTGTGCTGCATTCAACCAAACTGATCCAAG...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGCACTCTTGGATCAGTTaGGTTGAATGCAGCACAATT +
Preference number: 5 (lower is better)
Translates to: ETKSENISLPKSPAVQYQHSWIS*VECSTI
Trigger: AATTGTGCTGCATTCAACCAAACTGATCCAAGAGTG...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp CTCAGTGGTATTAATACATTAGTAAGCAGAGTTCTAAGAAGGCTTCCTCTCTATAGTAGATCCTGCGTGTaGTGTAGTCCAGAACCATGC +
Preference number: 5 (lower is better)
Translates to: LSGINTLVSRVLRRLPLYSRSCV*CSPEPC
Trigger: GCATGGTTCTGGACTACACAACACGCAGGATCTACT...ATAGAGAGGAAGCCTTCTTAGAACTCTGCTTACTAATGTATTAATACCACTGAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGGATATGTCCAGTGTCTaGATTGTGGTGATGCTTTCA +
Preference number: 5 (lower is better)
Translates to: ETKSENISLPKSPAVQYQDMSSV*IVVMLS
Trigger: TGAAAGCATCACCACAATCAAGACACTGGACATATC...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp TGGAAGAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCGTAGCAAAGATCCTTTaGGGACAGTTAATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: WKRRPKVKTFLCQSHLQFVAKIL*GQLISF
Trigger: AAAGGAGATTAACTGTCCCAAAAGGATCTTTGCTAC...GAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGTTCTCCATGATTTGCTaGTTTCGTTTTGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: ETKSENISLPKSPAVQYQFSMIC*FRFERF
Trigger: GAACCTCTCAAAACGAAACAAGCAAATCATGGAGAA...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000642385.2
CDS-3UTR CAA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTACTCGAACCATCTCTTaGCTCCCTGCGTCAATATTT +
Preference number: 5 (lower is better)
Translates to: TKSENISLPKSPAVQYQITRTIS*LPASIF
Trigger: AAATATTGACGCAGGGAGCAAAGAGATGGTTCGAGT...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTAGTGCTTGCAATATTTaGTCTTGGGTGTCAGCATCC +
Preference number: 5 (lower is better)
Translates to: TKSENISLPKSPAVQYQISACNI*SWVSAS
Trigger: GGATGCTGACACCCAAGACAAAATATTGCAAGCACT...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCATCCCCATATATCTTaGAACAAGGGTACTGTTTAC +
Preference number: 5 (lower is better)
Translates to: EETKSENISLPKSPAVQYHPHIS*NKGTVY
Trigger: GTAAACAGTACCCTTGTTCAAAGATATATGGGGATG...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTACATCCCCATATATCTTaGAACAAGGGTACTGTTTAC +
Preference number: 5 (lower is better)
Translates to: EVISQARPEGLSGINTLVHPHIS*NKGTVY
Trigger: GTAAACAGTACCCTTGTTCAAAGATATATGGGGATG...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGGAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACAAAGCAGAATTTCTTTaGCAGTGGCTCTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: EETKSENISLPKSPAVQYKAEFL*QWLLKI
Trigger: GATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTT...GTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAGACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGAAAGCAGAATTTCTTTaGCAGTGGCTCTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: ETKSENISLPKSPAVQYQKAEFL*QWLLKI
Trigger: GATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTT...CTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTCCTAAAGACAAGAACTaGATTCCACTCAGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TKSENISLPKSPAVQYQIPKDKN*IPLRSS
Trigger: AGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAGTAGCAAAGATCCTTTaGGGACAGTTAATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: EVISQARPEGLSGINTLVVAKIL*GQLISF
Trigger: AAAGGAGATTAACTGTCCCAAAAGGATCTTTGCTAC...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp TGTAGACAGAATCCTGATTCATGGCTCTGGGCTCTAGGTAAAACTCAAAACTTTCATCCCCATATATCTTaGAACAAGGGTACTGTTTAC +
Preference number: 5 (lower is better)
Translates to: CRQNPDSWLWALGKTQNFHPHIS*NKGTVY
Trigger: GTAAACAGTACCCTTGTTCAAAGATATATGGGGATG...AAAGTTTTGAGTTTTACCTAGAGCCCAGAGCCATGAATCAGGATTCTGTCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTCTTTTGCAGTGGCTCTaGAAGATCGATAGATTTGAG +
Preference number: 5 (lower is better)
Translates to: TKSENISLPKSPAVQYQILLQWL*KIDRFE
Trigger: CTCAAATCTATCGATCTTCAAGAGCCACTGCAAAAG...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTCTTGGATCAGTTTGGTaGAATGCAGCACAATTCCTT +
Preference number: 5 (lower is better)
Translates to: TKSENISLPKSPAVQYQILGSVW*NAAQFL
Trigger: AAGGAATTGTGCTGCATTCAACCAAACTGATCCAAG...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTCACTCTTGGATCAGTTaGGTTGAATGCAGCACAATT +
Preference number: 5 (lower is better)
Translates to: TKSENISLPKSPAVQYQIHSWIS*VECSTI
Trigger: AATTGTGCTGCATTCAACCAAACTGATCCAAGAGTG...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTCCTAAAGACAAGAACTaGATTCCACTCAGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICPKDKN*IPLRSS
Trigger: AGAGCTCCTGAGTGGAATCAAGTTCTTGTCTTTAGG...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp ATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTAAGCAGAATTATTGTAGCTGCTTaGGCACAGAAAATTGTGACT +
Preference number: 5 (lower is better)
Translates to: ISQARPEGLSGINTLVSRIIVAA*AQKIVT
Trigger: AGTCACAATTTTCTGTGCCAAAGCAGCTACAATAAT...TCTGCTTACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp GAAGTGATATCCCAGGCAAGGCCTGAAGGTCTCAGTGGTATTAATACATTAGTACCAGAACTTTGGCTTTaGTATTTTGACACCAATGAA +
Preference number: 5 (lower is better)
Translates to: EVISQARPEGLSGINTLVPELWL*YFDTNE
Trigger: TTCATTGGTGTCAAAATACAAAAGCCAAAGTTCTGG...TACTAATGTATTAATACCACTGAGACCTTCAGGCCTTGCCTGGGATATCACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp ACCAAAAGTGAAAACATTTCTCTGCCAAAGTCACCTGCAGTTCAATACCAGATTCATCCCCATATATCTTaGAACAAGGGTACTGTTTAC +
Preference number: 5 (lower is better)
Translates to: TKSENISLPKSPAVQYQIHPHIS*NKGTVY
Trigger: GTAAACAGTACCCTTGTTCAAAGATATATGGGGATG...AATCTGGTATTGAACTGCAGGTGACTTTGGCAGAGAAATGTTTTCACTTTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS-3UTR CAA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCATTCTGTGATCTTAGTTaGGGGTTAGAGGAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPFCDLS*GLEEEG
Trigger: TCCTTCCTCCTCTAACCCCAAACTAAGATCACAGAA...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAATTGGTAGCAATGCAATaGTCTGATGTACAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYELVAMQ*SDVQSR
Trigger: TCTGCTCTGTACATCAGACAATTGCATTGCTACCAA...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAATTCTCCATGATTTGCTaGTTTCGTTTTGAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEFSMIC*FRFERF
Trigger: GAACCTCTCAAAACGAAACAAGCAAATCATGGAGAA...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp GTAAAACTCAAAACTTTAATGGACACCCTAGGGTGTTACTCAACACAGTATGAAAAAGCAGAATTTCTTTaGCAGTGGCTCTTGAAGATC +
Preference number: 5 (lower is better)
Translates to: VKLKTLMDTLGCYSTQYEKAEFL*QWLLKI
Trigger: GATCTTCAAGAGCCACTGCAAAAGAAATTCTGCTTT...TTCATACTGTGTTGAGTAACACCCTAGGGTGTCCATTAAAGTTTTGAGTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCACTTGGATCAGTTTGGTaGAATGCAGCACAATTCCTT +
Preference number: 5 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPLGSVW*NAAQFL
Trigger: AAGGAATTGTGCTGCATTCAACCAAACTGATCCAAG...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp ATAGATATGTCCAGTGTCTTGATTGTGGTGATGCTTTCACAGGTATACATATGTATTATTGTAGCTGCTTaGGCACAGAAAATTGTGACT +
Preference number: 5 (lower is better)
Translates to: IDMSSVLIVVMLSQVYICIIVAA*AQKIVT
Trigger: AGTCACAATTTTCTGTGCCAAAGCAGCTACAATAAT...ACATATGTATACCTGTGAAAGCATCACCACAATCAAGACACTGGACATATCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS-3UTR CAA 90 bp TCTTCCAAGTTAACAATTCATAGCCAGAACTTTGGCTTTTGTATTTTGACACCAATTATTGTAGCTGCTTaGGCACAGAAAATTGTGACT +
Preference number: 5 (lower is better)
Translates to: SSKLTIHSQNFGFCILTPIIVAA*AQKIVT
Trigger: AGTCACAATTTTCTGTGCCAAAGCAGCTACAATAAT...TGGTGTCAAAATACAAAAGCCAAAGTTCTGGCTATGAATTGTTAACTTGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396594.8
ENST00000642385.2
CDS GCA 72 bp CGAACCAAGCGCCACGAAGCAGGCAGAGCGCGAGCCTaGCCCTCGGTTTCCGCGCTCGGGCGCGCGGGTAGA +
Preference number: 6 (lower is better)
Translates to: RTKRHEAGRARA*PSVSALGRAGR
Trigger: TCTACCCGCGCGCCCGAGCGCGGAAACCGAGGGGCAGGCTCGCGCTCTGCCTGCTTCGTGGCGCTTGGTTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642385.2
CDS CAA 90 bp GGGGCCAAGAACCCCAGGTCAGAGAACGAGAGGCTTGCTGCCATCTaGGAAGCAACCCGCCACCATGTTGGGAGCTCTGGGAGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: GAKNPRSENERLAAI*EATRHHVGSSGSKD
Trigger: GTCCTTGCTCCCAGAGCTCCCAACATGGTGGCGGGTTGCTTCCAAGATGGCAGCAAGCCTCTCGTTCTCTGACCTGGGGTTCTTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS GCA 72 bp GGCCAAGAACCCCAGGTCAGAGAACGAGAGGCTTGCTaGCATCTTGGAAGCAACCCGCCACCATGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: GQEPQVREREAC*HLGSNPPPCWE
Trigger: CTCCCAACATGGTGGCGGGTTGCTTCCAAGATGGCAGCAAGCCTCTCGTTCTCTGACCTGGGGTTCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS GCA 72 bp TGGGGCCAAGAACCCCAGGTCAGAGAACGAGAGGCTTaGTGCCATCTTGGAAGCAACCCGCCACCATGTTGG +
Preference number: 6 (lower is better)
Translates to: WGQEPQVREREA*CHLGSNPPPCW
Trigger: CCAACATGGTGGCGGGTTGCTTCCAAGATGGCAGCAAGCCTCTCGTTCTCTGACCTGGGGTTCTTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS CCA 72 bp GCTTGCTGCCATCTTGGAAGCAACCCGCCACCATGTTaGGAGCTCTGGGAGCAAGGACCCCCGGTAACATTG +
Preference number: 6 (lower is better)
Translates to: ACCHLGSNPPPC*ELWEQGPPVTL
Trigger: CAATGTTACCGGGGGTCCTTGCTCCCAGAGCTCCCAACATGGTGGCGGGTTGCTTCCAAGATGGCAGCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS CAA 72 bp GGCTTGCTGCCATCTTGGAAGCAACCCGCCACCATGTaGGGAGCTCTGGGAGCAAGGACCCCCGGTAACATT +
Preference number: 6 (lower is better)
Translates to: GLLPSWKQPATM*GALGARTPGNI
Trigger: AATGTTACCGGGGGTCCTTGCTCCCAGAGCTCCCAACATGGTGGCGGGTTGCTTCCAAGATGGCAGCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS GCA 72 bp GGGTCAACCAAATCCGAAACCACCACATCCACGTCCTaGACGGAGGACAAGGCCTGCTGGCGAATGACGTCT +
Preference number: 6 (lower is better)
Translates to: GSTKSETTTSTS*TEDKACWRMTS
Trigger: AGACGTCATTCGCCAGCAGGCCTTGTCCTCCGTGCAGGACGTGGATGTGGTGGTTTCGGATTTGGTTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp AGTAGATCCTGCGTGTTGTGTAGTCCAGAACCATGCTaGCAGCACCCAGCAGGGCGGGGTCAACCAAATCCG +
Preference number: 6 (lower is better)
Translates to: SRSCVLCSPEPC*QHPAGRGQPNP
Trigger: CGGATTTGGTTGACCCCGCCCTGCTGGGTGCTGCCAGCATGGTTCTGGACTACACAACACGCAGGATCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 90 bp CCCAAAGCTGTTCCAGCTGTTCTTAGGATGCTCTGGGCCTTCGCATaGCCAAGTTTCGCAGCTTGGATGAGATGGAGCGCACCCACAGCC +
Preference number: 6 (lower is better)
Translates to: PKAVPAVLRMLWAFA*PSFAAWMRWSAPTA
Trigger: GGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGCTGGAACAGCTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp AGCCTGCCAAAAGGATGCGATCATGGTCCTCACACATaGATATCAGGTGCTGCTCTGCACTGCGGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SLPKGCDHGPHT*ISGAALHCGCS
Trigger: GCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 72 bp GAGATGGAGCGCACCCACAGCCTCATCTTTTGGCACTaGCATCCCTTCCACCAAGAGCAGGTCCTCATCATG +
Preference number: 6 (lower is better)
Translates to: EMERTHSLIFWH*HPFHQEQVLIM
Trigger: CATGATGAGGACCTGCTCTTGGTGGAAGGGATGTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp GCCTTCGCATTGCCAAGTTTCGCAGCTTGGATGAGATaGAGCGCACCCACAGCCTCATCTTTTGGCACTGAC +
Preference number: 6 (lower is better)
Translates to: AFALPSFAAWMR*SAPTASSFGTD
Trigger: GTCAGTGCCAAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 72 bp GATGCTCTGGGCCTTCGCATTGCCAAGTTTCGCAGCTaGGATGAGATGGAGCGCACCCACAGCCTCATCTTT +
Preference number: 6 (lower is better)
Translates to: DALGLRIAKFRS*DEMERTHSLIF
Trigger: AAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp AAGGCCATTCCAGAGGCGTATGCTTCAATGCACCCATaGCTTCCACAGGAACAATCAGGCCCATCCAGAGAC +
Preference number: 6 (lower is better)
Translates to: KAIPEAYASMHP*LPQEQSGPSRD
Trigger: GTCTCTGGATGGGCCTGATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTCTGGAATGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp ATGCTCTGGGCCTTCGCATTGCCAAGTTTCGCAGCTTaGATGAGATGGAGCGCACCCACAGCCTCATCTTTT +
Preference number: 6 (lower is better)
Translates to: MLWAFALPSFAA*MRWSAPTASSF
Trigger: AAAAGATGAGGCTGTGGGTGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp CCAGGACTCCGGAGAGGATCACAAGGGAGGGATTCATaGTATGGAGGATGTTCACAACCCCAAGACCCAAAG +
Preference number: 6 (lower is better)
Translates to: PGLRRGSQGRDS*YGGCSQPQDPK
Trigger: CTTTGGGTCTTGGGGTTGTGAACATCCTCCATACCATGAATCCCTCCCTTGTGATCCTCTCCGGAGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 72 bp CTTCCACCAAGAGCAGGTCCTCATCATGGAGCTTTTTaGCCTCCCTCTGCAAGGCCATTCCAGAGGCGTATG +
Preference number: 6 (lower is better)
Translates to: LPPRAGPHHGAF*PPSARPFQRRM
Trigger: CATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAAAAGCTCCATGATGAGGACCTGCTCTTGGTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 72 bp GTTCCAGCTGTTCTTAGGATGCTCTGGGCCTTCGCATaGCCAAGTTTCGCAGCTTGGATGAGATGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: VPAVLRMLWAFA*PSFAAWMRWSA
Trigger: TGCGCTCCATCTCATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGCTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 72 bp CATGTCTGTTCCTGGAGGTCTAGTAGATCCTGCGTGTaGTGTAGTCCAGAACCATGCTGGCAGCACCCAGCA +
Preference number: 6 (lower is better)
Translates to: HVCSWRSSRSCV*CSPEPCWQHPA
Trigger: TGCTGGGTGCTGCCAGCATGGTTCTGGACTACACAACACGCAGGATCTACTAGACCTCCAGGAACAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 72 bp GGTCCTCACACATGGATATCAGGTGCTGCTCTGCACTaGGGGTGCAGCACACATGATAATGAGCCAGTTTTG +
Preference number: 6 (lower is better)
Translates to: GPHTWISGAALH*GCSTHDNEPVL
Trigger: CAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTGAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 72 bp ATCATGGTCCTCACACATGGATATCAGGTGCTGCTCTaGACTGCGGGTGCAGCACACATGATAATGAGCCAG +
Preference number: 6 (lower is better)
Translates to: IMVLTHGYQVLL*TAGAAHMIMSQ
Trigger: CTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTGAGGACCATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 72 bp GTGTTCCAAAAGCTCCAACTTCTCGAACCCCACAGCTaGTGTTCCCAATCATACAGCCAGCATGGGCAACCA +
Preference number: 6 (lower is better)
Translates to: VFQKLQLLEPHS*CSQSYSQHGQP
Trigger: TGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGTTCGAGAAGTTGGAGCTTTTGGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 72 bp TTTTGCCTCCCTCTGCAAGGCCATTCCAGAGGCGTATaGTTCAATGCACCCATGGCTTCCACAGGAACAATC +
Preference number: 6 (lower is better)
Translates to: FCLPLQGHSRGV*FNAPMASTGTI
Trigger: GATTGTTCCTGTGGAAGCCATGGGTGCATTGAAGCATACGCCTCTGGAATGGCCTTGCAGAGGGAGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 72 bp AAGGTCCATGTCTGTTCCTGGAGGTCTAGTAGATCCTaGGTGTTGTGTAGTCCAGAACCATGCTGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: KVHVCSWRSSRS*VLCSPEPCWQH
Trigger: GTGCTGCCAGCATGGTTCTGGACTACACAACACGCAGGATCTACTAGACCTCCAGGAACAGACATGGACCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp AGACCCAAAGCTGTTCCAGCTGTTCTTAGGATGCTCTaGGCCTTCGCATTGCCAAGTTTCGCAGCTTGGATG +
Preference number: 6 (lower is better)
Translates to: RPKAVPAVLRML*AFALPSFAAWM
Trigger: CATCCAAGCTGCGAAACTTGGCAATGCGAAGGCCCAGAGCATCCTAAGAACAGCTGGAACAGCTTTGGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp CTCAGGAGCTCTGGAGAGAAGGTCCATGTCTGTTCCTaGAGGTCTAGTAGATCCTGCGTGTTGTGTAGTCCA +
Preference number: 6 (lower is better)
Translates to: LRSSGEKVHVCS*RSSRSCVLCSP
Trigger: TGGACTACACAACACGCAGGATCTACTAGACCTCCAGGAACAGACATGGACCTTCTCTCCAGAGCTCCTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp CCCACGTCTTCCAATAGAGCTATAACATTCACCGCATaGCCCAAGATTCCATTCCTTGGAATCCGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: PTSSNRAITFTA*PKIPFLGIRGA
Trigger: GGCCCCACGGATTCCAAGGAATGGAATCTTGGGCCATGCGGTGAATGTTATAGCTCTATTGGAAGACGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS CAA 72 bp CCTTGGCCAAATTTCCTTTCCGCCAGGGCAGCACAGTaGCCATCATTGTCTACCCACACAGGGAGATGCAAA +
Preference number: 6 (lower is better)
Translates to: PWPNFLSARAAQ*PSLSTHTGRCK
Trigger: TTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 90 bp AGTCCCTTTCCTTGGCCAAATTTCCTTTCCGCCAGGGCAGCACAGTaGCCATCATTGTCTACCCACACAGGGAGATGCAAAGTGTCAGAA +
Preference number: 6 (lower is better)
Translates to: SPFPWPNFLSARAAQ*PSLSTHTGRCKVSE
Trigger: TTCTGACACTTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp ACCCCACAGCTGCTGTTCCCAATCATACAGCCAGCATaGGCAACCAACTGTATAAACTGGTCAAATGGGACG +
Preference number: 6 (lower is better)
Translates to: TPQLLFPIIQPA*ATNCINWSNGT
Trigger: CGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGATTGGGAACAGCAGCTGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp ACTCCGGAGAGGATCACAAGGGAGGGATTCATGGTATaGAGGATGTTCACAACCCCAAGACCCAAAGCTGTT +
Preference number: 6 (lower is better)
Translates to: TPERITREGFMV*RMFTTPRPKAV
Trigger: AACAGCTTTGGGTCTTGGGGTTGTGAACATCCTCCATACCATGAATCCCTCCCTTGTGATCCTCTCCGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 90 bp GCTCTGGGAGCAAGGACCCCCGGTAACATTGTGATGTCTGCCATGTaGTTTTATGAGGTCCTTGAAAGCATGACTCCCTCTGCAGATAAC +
Preference number: 6 (lower is better)
Translates to: ALGARTPGNIVMSAM*FYEVLESMTPSADN
Trigger: GTTATCTGCAGAGGGAGTCATGCTTTCAAGGACCTCATAAAACAACATGGCAGACATCACAATGTTACCGGGGGTCCTTGCTCCCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS TCA 72 bp TGGGAGCTCTGGGAGCAAGGACCCCCGGTAACATTGTaGTGTCTGCCATGTTGTTTTATGAGGTCCTTGAAA +
Preference number: 6 (lower is better)
Translates to: WELWEQGPPVTL*CLPCCFMRSLK
Trigger: TTTCAAGGACCTCATAAAACAACATGGCAGACATCACAATGTTACCGGGGGTCCTTGCTCCCAGAGCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS GCA 72 bp CACACATGGATATCAGGTGCTGCTCTGCACTGCGGGTaGAGCACACATGATAATGAGCCAGTTTTGTTATGG +
Preference number: 6 (lower is better)
Translates to: HTWISGAALHCG*STHDNEPVLLW
Trigger: CCATAACAAAACTGGCTCATTATCATGTGTGCTGCACCCGCAGTGCAGAGCAGCACCTGATATCCATGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 72 bp GAAGTTTGTCATAGGAAGGGCAGCCTGCCAAAAGGATaGGATCATGGTCCTCACACATGGATATCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: EVCHRKGSLPKG*DHGPHTWISGA
Trigger: AGCACCTGATATCCATGTGTGAGGACCATGATCGCATCCTTTTGGCAGGCTGCCCTTCCTATGACAAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 72 bp AATTTCCTTTCCGCCAGGGCAGCACAGTTGCCATCATaGTCTACCCACACAGGGAGATGCAAAGTGTCAGAA +
Preference number: 6 (lower is better)
Translates to: NFLSARAAQLPS*STHTGRCKVSE
Trigger: TTCTGACACTTTGCATCTCCCTGTGTGGGTAGACAATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 72 bp TCAAATGGGACGTGTTTAACTGCACGAAAGTTGGGATaGTGCTCAATGCCCTTCTTCCGCATCACTCGAACC +
Preference number: 6 (lower is better)
Translates to: SNGTCLTARKLG*CSMPFFRITRT
Trigger: GGTTCGAGTGATGCGGAAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 72 bp CCCCTGTTTCTCTTCCAATCTGACGTGTTCCCAGGTTaGTCACAGGTGTTCCAAAAGCTCCAACTTCTCGAA +
Preference number: 6 (lower is better)
Translates to: PLFLFQSDVFPG*SQVFQKLQLLE
Trigger: TTCGAGAAGTTGGAGCTTTTGGAACACCTGTGATCAACCTGGGAACACGTCAGATTGGAAGAGAAACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 72 bp TCCACAGAGTTCCACTCTTGGATCAGTTTGGTTGAATaGAGCACAATTCCTTCCCGAGGATTTACACGGCCA +
Preference number: 6 (lower is better)
Translates to: STEFHSWISLVE*STIPSRGFTRP
Trigger: TGGCCGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 72 bp GCAAGGACCCCCGGTAACATTGTGATGTCTGCCATGTaGTTTTATGAGGTCCTTGAAAGCATGACTCCCTCT +
Preference number: 6 (lower is better)
Translates to: ARTPGNIVMSAM*FYEVLESMTPS
Trigger: AGAGGGAGTCATGCTTTCAAGGACCTCATAAAACAACATGGCAGACATCACAATGTTACCGGGGGTCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644762.1
CDS CAA 90 bp TCCTGTGCCTGTGATAAGTGTAACAAAGTTTTCCAGTCCCTTTCCTaGGCCAAATTTCCTTTCCGCCAGGGCAGCACAGTTGCCATCATT +
Preference number: 6 (lower is better)
Translates to: SCACDKCNKVFQSLS*AKFPFRQGSTVAII
Trigger: AATGATGGCAACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACAGGCACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 72 bp CATGCGAATGATGCTCATGTAGTCTTTGTTCTTGGCTaGGAGAAGTTTGTCATAGGAAGGGCAGCCTGCCAA +
Preference number: 6 (lower is better)
Translates to: HANDAHVVFVLG*EKFVIGRAACQ
Trigger: TTGGCAGGCTGCCCTTCCTATGACAAACTTCTCTCAGCCAAGAACAAAGACTACATGAGCATCATTCGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 72 bp AAGGTCCACAGAGTTCCACTCTTGGATCAGTTTGGTTaGATGCAGCACAATTCCTTCCCGAGGATTTACACG +
Preference number: 6 (lower is better)
Translates to: KVHRVPLLDQFG*MQHNSFPRIYT
Trigger: CGTGTAAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS TCA 72 bp CTCGAACCATCTCTTTGCTCCCTAGCCACATGCGAATaGTGCTCATGTAGTCTTTGTTCTTGGCTGAGAGAA +
Preference number: 6 (lower is better)
Translates to: LEPSLCSLATCE*CSCSLCSWLRE
Trigger: TTCTCTCAGCCAAGAACAAAGACTACATGAGCATCATTCGCATGTGGCTAGGGAGCAAAGAGATGGTTCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539208.5
CDS CCA 72 bp GCCAGCATGGGCAACCAACTGTATAAACTGGTCAAATaGGACGTGTTTAACTGCACGAAAGTTGGGATGATG +
Preference number: 6 (lower is better)
Translates to: ASMGNQLYKLVK*DVFNCTKVGMM
Trigger: CATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CCA 72 bp GTTTCCATCCCGAAGCACGAGCTCTGTACCCTAGTGTaGTTTGAAATAATGAGCAGAGCAGCTGTTTTCTTG +
Preference number: 6 (lower is better)
Translates to: VSIPKHELCTLV*FEIMSRAAVFL
Trigger: CAAGAAAACAGCTGCTCTGCTCATTATTTCAAACCACACTAGGGTACAGAGCTCGTGCTTCGGGATGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543356.7
CDS CAA 72 bp GTCCTAAGGTCCACAGAGTTCCACTCTTGGATCAGTTaGGTTGAATGCAGCACAATTCCTTCCCGAGGATTT +
Preference number: 6 (lower is better)
Translates to: VLRSTEFHSWIS*VECSTIPSRGF
Trigger: AAATCCTCGGGAAGGAATTGTGCTGCATTCAACCAAACTGATCCAAGAGTGGAACTCTGTGGACCTTAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 90 bp GTACTGTTTACCAAACTGAAGGTGCAGTGCTTGCAATATTTTGTCTaGGGTGTCAGCATCCCGGACATGAAGAACATTCTCCCCTGTTTC +
Preference number: 6 (lower is better)
Translates to: VLFTKLKVQCLQYFV*GVSIPDMKNILPCF
Trigger: GAAACAGGGGAGAATGTTCTTCATGTCCGGGATGCTGACACCCAAGACAAAATATTGCAAGCACTGCACCTTCAGTTTGGTAAACAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 72 bp TGTGATAAGTGTAACAAAGTTTTCCAGTCCCTTTCCTaGGCCAAATTTCCTTTCCGCCAGGGCAGCACAGTT +
Preference number: 6 (lower is better)
Translates to: CDKCNKVFQSLS*AKFPFRQGSTV
Trigger: AACTGTGCTGCCCTGGCGGAAAGGAAATTTGGCCAAGGAAAGGGACTGGAAAACTTTGTTACACTTATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 72 bp AATGCCAAACATGATCGGGGCAAGTTTAGAATAATCTaGACGGTTACAAGTAGCAACACAAACCCGCAGCTT +
Preference number: 6 (lower is better)
Translates to: NAKHDRGKFRII*TVTSSNTNPQL
Trigger: AAGCTGCGGGTTTGTGTTGCTACTTGTAACCGTGCAGATTATTCTAAACTTGCCCCGATCATGTTTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000642385.2
CDS CCA 72 bp ATCATACAGCCAGCATGGGCAACCAACTGTATAAACTaGTCAAATGGGACGTGTTTAACTGCACGAAAGTTG +
Preference number: 6 (lower is better)
Translates to: IIQPAWATNCIN*SNGTCLTARKL
Trigger: CAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTGGTTGCCCATGCTGGCTGTATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS GCA 72 bp CAACTGTATAAACTGGTCAAATGGGACGTGTTTAACTaGACGAAAGTTGGGATGATGCTCAATGCCCTTCTT +
Preference number: 6 (lower is better)
Translates to: QLYKLVKWDVFN*TKVGMMLNALL
Trigger: AAGAAGGGCATTGAGCATCATCCCAACTTTCGTGCAGTTAAACACGTCCCATTTGACCAGTTTATACAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000539208.5
ENST00000543356.7
ENST00000642385.2
CDS CAA 72 bp CCTGCGTCAATATTTGGAAACAGGACTAGGGTCCGCTaGTTAAATGAGATAAGTGCATCCAATGTTAATTCA +
Preference number: 6 (lower is better)
Translates to: PASIFGNRTRVR*LNEISASNVNS
Trigger: TGAATTAACATTGGATGCACTTATCTCATTTAACAAGCGGACCCTAGTCCTGTTTCCAAATATTGACGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396594.8
ENST00000447283.6
ENST00000543356.7
ENST00000642385.2