RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNB5 (Homo sapiens)

Ensembl gene IDs: ENSG00000069966

Ensembl transcript IDs: ENST00000261837.12, ENST00000358784.11, ENST00000396335.8, ENST00000557936.5, ENST00000558122.1, ENST00000558519.5, ENST00000559348.5, ENST00000559541.1, ENST00000560075.1, ENST00000560085.1, ENST00000560116.1, ENST00000561313.5

Found 731 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGATTCACTCGCGGCCTCCCCAGTGGGCCTCCGGCTCAGATTTCCTaGCCCACCTCAGGCCCGCCCAGTCCAGATCTCAGGGCAGGGCCC +
Preference number: 1 (lower is better)
Translates to: RFTRGLPSGPPAQIS*PTSGPPSPDLRAGP
Trigger: GGGCCCTGCCCTGAGATCTGGACTGGGCGGGCCTGAGGTGGGCCAGGAAATCTGAGCCGGAGGCCCACTGGGGAGGCCGCGAGTGAATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTaGCGGCAGACCCCAGGCCACCGACGAGGCAGGCCTCACCAGGAA +
Preference number: 1 (lower is better)
Translates to: VQGTRCTQPSGAART*RQTPGHRRGRPHQE
Trigger: TTCCTGGTGAGGCCTGCCTCGTCGGTGGCCTGGGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR GCA 90 bp GGGCTGGAGCAGGGCCAGGAAAGGAGACCTGTCCAGGGGACAAGGTaGACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCCA +
Preference number: 1 (lower is better)
Translates to: GLEQGQERRPVQGTR*TQPSGAARTCRQTP
Trigger: TGGGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGACAGGTCTCCTTTCCTGGCCCTGCTCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR GCA 90 bp CAACGGGATGCCCACCTCTGGCTCGCCTGGGAGAAGAGGGACGGCTaGCAGGGCCCCACCGGTGAGAGGCTGACCGCGCATTCTAAAGCA +
Preference number: 1 (lower is better)
Translates to: QRDAHLWLAWEKRDG*QGPTGERLTAHSKA
Trigger: TGCTTTAGAATGCGCGGTCAGCCTCTCACCGGTGGGGCCCTGGCAGCCGTCCCTCTTCTCCCAGGCGAGCCAGAGGTGGGCATCCCGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 90 bp TGGCCCACCTCAGGCCCGCCCAGTCCAGATCTCAGGGCAGGGCCCTaGAGGCGCAGTGCAGGAACCTGCCATGGGTGGGACGATTCTTCT +
Preference number: 1 (lower is better)
Translates to: WPTSGPPSPDLRAGP*RRSAGTCHGWDDSS
Trigger: AGAAGAATCGTCCCACCCATGGCAGGTTCCTGCACTGCGCCTTCAGGGCCCTGCCCTGAGATCTGGACTGGGCGGGCCTGAGGTGGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp AGGCCCGCCCAGTCCAGATCTCAGGGCAGGGCCCTGAAGGCGCAGTaGAGGAACCTGCCATGGGTGGGACGATTCTTCTCAGCAGGCAAG +
Preference number: 1 (lower is better)
Translates to: RPAQSRSQGRALKAQ*RNLPWVGRFFSAGK
Trigger: CTTGCCTGCTGAGAAGAATCGTCCCACCCATGGCAGGTTCCTGCACTGCGCCTTCAGGGCCCTGCCCTGAGATCTGGACTGGGCGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp GGGCCACTGTGGGACATTCTGGAGCAGAGCTCAGGAATCCCATGGTaGCCTGACCCCTTCAGCACCTGGCAGGAGCTGGCCAGACACTGG +
Preference number: 1 (lower is better)
Translates to: GPLWDILEQSSGIPW*PDPFSTWQELARHW
Trigger: CCAGTGTCTGGCCAGCTCCTGCCAGGTGCTGAAGGGGTCAGGGCACCATGGGATTCCTGAGCTCTGCTCCAGAATGTCCCACAGTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp GGATTTTCAGGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTaGCTCTCTGGGACTTCCTCCACCGACCGGGGCTGTCCCAAAGCC +
Preference number: 1 (lower is better)
Translates to: GFSGHRPQLVPSPSD*LSGTSSTDRGCPKA
Trigger: GGCTTTGGGACAGCCCCGGTCGGTGGAGGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACCTGAAAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp TGGTGCCCTGACCCCTTCAGCACCTGGCAGGAGCTGGCCAGACACTaGGCCCATTTCCTGAGCCCCTGCCCAGACTGGAATCTACTGGGA +
Preference number: 1 (lower is better)
Translates to: WCPDPFSTWQELARH*AHFLSPCPDWNLLG
Trigger: TCCCAGTAGATTCCAGTCTGGGCAGGGGCTCAGGAAATGGGCCCAGTGTCTGGCCAGCTCCTGCCAGGTGCTGAAGGGGTCAGGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp GCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTaGAAGAGTCTCTCTGAGGAGCAGGGCCTGGAGCTGGGCCTGCAA +
Preference number: 1 (lower is better)
Translates to: ASGPVLSYGCAQLQL*KSLSEEQGLELGLQ
Trigger: TTGCAGGCCCAGCTCCAGGCCCTGCTCCTCAGAGAGACTCTTCCAGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR TCA 90 bp CTCTGGGACTTCCTCCACCGACCGGGGCTGTCCCAAAGCCTCCTCTaGAGGCTTTCCCTAGGGTGGCTCTCCTCAATCATCCTGTCACCT +
Preference number: 1 (lower is better)
Translates to: LWDFLHRPGLSQSLL*RLSLGWLSSIILSP
Trigger: AGGTGACAGGATGATTGAGGAGAGCCACCCTAGGGAAAGCCTTCAGAGGAGGCTTTGGGACAGCCCCGGTCGGTGGAGGAAGTCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp CCACTGCGAGAGCGCATGCTCACAGCGAAGGAGGCTTCCTGCCCATaGGGGGAGTGGAAGCATTCTCTGGAATACTTTCCCTGGGCCCTT +
Preference number: 1 (lower is better)
Translates to: PLRERMLTAKEASCP*GEWKHSLEYFPWAL
Trigger: AAGGGCCCAGGGAAAGTATTCCAGAGAATGCTTCCACTCCCCGCATGGGCAGGAAGCCTCCTTCGCTGTGAGCATGCGCTCTCGCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp AGTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATaGTCACAGCGAAGGAGGCTTCCTGCCCATGCGGGGAGTGGAAGC +
Preference number: 1 (lower is better)
Translates to: SISSANPDSTHCESA*SQRRRLPAHAGSGS
Trigger: GCTTCCACTCCCCGCATGGGCAGGAAGCCTCCTTCGCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp CAAGGGGATCAGACTGCATCACAGGGTAGCTCTGCCCAGTCCCACTaGAGCCTCATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGG +
Preference number: 1 (lower is better)
Translates to: QGDQTASQGSSAQSH*SLIFPTLHVFIPTG
Trigger: CCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATGAGGCTGCAGTGGGACTGGGCAGAGCTACCCTGTGATGCAGTCTGATCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR GCA 90 bp ACCTGGCAGGAGCTGGCCAGACACTGGGCCCATTTCCTGAGCCCCTaGCCAGACTGGAATCTACTGGGACTAAAAAGCACTCTCTCTGGG +
Preference number: 1 (lower is better)
Translates to: TWQELARHWAHFLSP*PDWNLLGLKSTLSG
Trigger: CCCAGAGAGAGTGCTTTTTAGTCCCAGTAGATTCCAGTCTGGGCAGGGGCTCAGGAAATGGGCCCAGTGTCTGGCCAGCTCCTGCCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp GAGCTGGCCAGACACTGGGCCCATTTCCTGAGCCCCTGCCCAGACTaGAATCTACTGGGACTAAAAAGCACTCTCTCTGGGCTCCCTGGA +
Preference number: 1 (lower is better)
Translates to: ELARHWAHFLSPCPD*NLLGLKSTLSGLPG
Trigger: TCCAGGGAGCCCAGAGAGAGTGCTTTTTAGTCCCAGTAGATTCCAGTCTGGGCAGGGGCTCAGGAAATGGGCCCAGTGTCTGGCCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp CTCACAGAGGAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTaGCCTGGCAACTATGAGAGCCCGGGACACAAAGGCCCTTACAAC +
Preference number: 1 (lower is better)
Translates to: LTEESQYRWCHLSAS*PGNYESPGHKGPYN
Trigger: GTTGTAAGGGCCTTTGTGTCCCGGGCTCTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTCCTCTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp GAGCGCATGCTCACAGCGAAGGAGGCTTCCTGCCCATGCGGGGAGTaGAAGCATTCTCTGGAATACTTTCCCTGGGCCCTTAAAGTGGCT +
Preference number: 1 (lower is better)
Translates to: ERMLTAKEASCPCGE*KHSLEYFPWALKVA
Trigger: AGCCACTTTAAGGGCCCAGGGAAAGTATTCCAGAGAATGCTTCCACTCCCCGCATGGGCAGGAAGCCTCCTTCGCTGTGAGCATGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 90 bp CCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATaGGAGCCCGGGACACAAAGGCCCTTACAACCCTGTGCTGTTTTA +
Preference number: 1 (lower is better)
Translates to: PVSVVPPFSQLAWQL*EPGTQRPLQPCAVL
Trigger: TAAAACAGCACAGGGTTGTAAGGGCCTTTGTGTCCCGGGCTCTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp ATCCTGAAGATGCTCTCCACCTCTCCAAACATGGAACCTGGAATGTaGTTCCCTGGGCCACCTTTCCTTCCTTTCTCGTGCCTTCCTGCA +
Preference number: 1 (lower is better)
Translates to: ILKMLSTSPNMEPGM*FPGPPFLPFSCLPA
Trigger: TGCAGGAAGGCACGAGAAAGGAAGGAAAGGTGGCCCAGGGAAGCACATTCCAGGTTCCATGTTTGGAGAGGTGGAGAGCATCTTCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp CAGCGAAGGAGGCTTCCTGCCCATGCGGGGAGTGGAAGCATTCTCTaGAATACTTTCCCTGGGCCCTTAAAGTGGCTTTTTGGATTGGAA +
Preference number: 1 (lower is better)
Translates to: QRRRLPAHAGSGSIL*NTFPGPLKWLFGLE
Trigger: TTCCAATCCAAAAAGCCACTTTAAGGGCCCAGGGAAAGTATTCCAGAGAATGCTTCCACTCCCCGCATGGGCAGGAAGCCTCCTTCGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp TCACCTCTTTCTTTGCCAAGCTCTTCCAAGGCCCTTAGTGGTTTCTaGGAGGTCTCACACAGAGGGGCTGGAAAAGGGCTCATTAGCCCA +
Preference number: 1 (lower is better)
Translates to: SPLSLPSSSKALSGF*EVSHRGAGKGLISP
Trigger: TGGGCTAATGAGCCCTTTTCCAGCCCCTCTGTGTGAGACCTCCCAGAAACCACTAAGGGCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp TGCACATATCCTGAAGATGCTCTCCACCTCTCCAAACATGGAACCTaGAATGTGCTTCCCTGGGCCACCTTTCCTTCCTTTCTCGTGCCT +
Preference number: 1 (lower is better)
Translates to: CTYPEDALHLSKHGT*NVLPWATFPSFLVP
Trigger: AGGCACGAGAAAGGAAGGAAAGGTGGCCCAGGGAAGCACATTCCAGGTTCCATGTTTGGAGAGGTGGAGAGCATCTTCAGGATATGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp GATAGTCACCCTACAGTGCCGCCAAACACTAGACTCCTATCTTGCTaGAAATTTGATTCCATTAACCAACTCCTCCCCACCCCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: DSHPTVPPNTRLLSC*KFDSINQLLPTPCC
Trigger: GCAGCAGGGGGTGGGGAGGAGTTGGTTAATGGAATCAAATTTGCAGCAAGATAGGAGTCTAGTGTTTGGCGGCACTGTAGGGTGACTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp AGCGATAGTCACCCTACAGTGCCGCCAAACACTAGACTCCTATCTTaGTGCAAATTTGATTCCATTAACCAACTCCTCCCCACCCCCTGC +
Preference number: 1 (lower is better)
Translates to: SDSHPTVPPNTRLLS*CKFDSINQLLPTPC
Trigger: GCAGGGGGTGGGGAGGAGTTGGTTAATGGAATCAAATTTGCAGCAAGATAGGAGTCTAGTGTTTGGCGGCACTGTAGGGTGACTATCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp ACCCAATTCTCTCCGGTCACGGATGAGAGGGCAAGTGGTTTAGCATaGCAATCCTTACAAAGGATCCACAGAGACAAGATTCACTCGCGG +
Preference number: 1 (lower is better)
Translates to: TQFSPVTDERASGLA*QSLQRIHRDKIHSR
Trigger: CCGCGAGTGAATCTTGTCTCTGTGGATCCTTTGTAAGGATTGCCATGCTAAACCACTTGCCCTCTCATCCGTGACCGGAGAGAATTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp CTAAAATTTAAATCTAAGTTGAGCTGTGCATGCCCAAGCCAGACTTaGAAGGGGATCAGACTGCATCACAGGGTAGCTCTGCCCAGTCCC +
Preference number: 1 (lower is better)
Translates to: LKFKSKLSCACPSQT*KGIRLHHRVALPSP
Trigger: GGGACTGGGCAGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCACAGCTCAACTTAGATTTAAATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR CCA 90 bp TCCTGCCCATGCGGGGAGTGGAAGCATTCTCTGGAATACTTTCCCTaGGCCCTTAAAGTGGCTTTTTGGATTGGAAAGTCACAGTCTACT +
Preference number: 1 (lower is better)
Translates to: SCPCGEWKHSLEYFP*ALKVAFWIGKSQST
Trigger: AGTAGACTGTGACTTTCCAATCCAAAAAGCCACTTTAAGGGCCCAGGGAAAGTATTCCAGAGAATGCTTCCACTCCCCGCATGGGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp CAGGAACCTGCCATGGGTGGGACGATTCTTCTCAGCAGGCAAGTTTaGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAG +
Preference number: 1 (lower is better)
Translates to: QEPAMGGTILLSRQV*EMKIYKSPLNQLFQ
Trigger: CTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAAACTTGCCTGCTGAGAAGAATCGTCCCACCCATGGCAGGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp GCCACCGCGCCCAGTCACCTTTGTTTTTCTTTACCTCCTGGAATATaGACACAGTTTACTACAGCACACATATTCCTGTTGCAATGCCCT +
Preference number: 1 (lower is better)
Translates to: ATAPSHLCFSLPPGI*TQFTTAHIFLLQCP
Trigger: AGGGCATTGCAACAGGAATATGTGTGCTGTAGTAAACTGTGTGCATATTCCAGGAGGTAAAGAAAAACAAAGGTGACTGGGCGCGGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 90 bp AGATATTATCATATATTCTGTGACCGTGACAGAGGTGGGTGTGAATaGAGGCCAGCCCTCTTATGTCACCAAGGCATCCCTCTAACTCAC +
Preference number: 1 (lower is better)
Translates to: RYYHIFCDRDRGGCE*RPALLCHQGIPLTH
Trigger: GTGAGTTAGAGGGATGCCTTGGTGACATAAGAGGGCTGGCCTTCATTCACACCCACCTCTGTCACGGTCACAGAATATATGATAATATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 90 bp GGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACAGTaGCCTCTGCTTCATGGTTCCTGGTTTCTGACAAAGTTAATCTTT +
Preference number: 1 (lower is better)
Translates to: GEAANYRGKHTGWKQ*PLLHGSWFLTKLIF
Trigger: AAAGATTAACTTTGTCAGAAACCAGGAACCATGAAGCAGAGGTCACTGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp GGGCCCTTAAAGTGGCTTTTTGGATTGGAAAGTCACAGTCTACTTTaGACATATCCTGAAGATGCTCTCCACCTCTCCAAACATGGAACC +
Preference number: 1 (lower is better)
Translates to: GPLKWLFGLESHSLL*TYPEDALHLSKHGT
Trigger: GGTTCCATGTTTGGAGAGGTGGAGAGCATCTTCAGGATATGTGCAAAGTAGACTGTGACTTTCCAATCCAAAAAGCCACTTTAAGGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp AGACAAATAGTACATGCAGTTGCACATGTGGTTGCAAGTTTTCCATaGTTTGCCCATTTCCATGTTGGTATTGGCAGCCCCTATGGTGGC +
Preference number: 1 (lower is better)
Translates to: RQIVHAVAHVVASFP*FAHFHVGIGSPYGG
Trigger: GCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCATGTACTATTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR TCA 90 bp GTGGCTTTTTGGATTGGAAAGTCACAGTCTACTTTGCACATATCCTaGAGATGCTCTCCACCTCTCCAAACATGGAACCTGGAATGTGCT +
Preference number: 1 (lower is better)
Translates to: VAFWIGKSQSTLHIS*RCSPPLQTWNLECA
Trigger: AGCACATTCCAGGTTCCATGTTTGGAGAGGTGGAGAGCATCTTCAGGATATGTGCAAAGTAGACTGTGACTTTCCAATCCAAAAAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp ATCACGGGGCTGTCACAAGGATTACATGAATCGGTATATACAAAGTaGTTAGCACAGTACCTGGCACACAGTAAAAGGTTGTCACTCCAC +
Preference number: 1 (lower is better)
Translates to: ITGLSQGLHESVYTK*LAQYLAHSKRLSLH
Trigger: GTGGAGTGACAACCTTTTACTGTGTGCCAGGTACTGTGCTAAGCACTTTGTATATACCGATTCATGTAATCCTTGTGACAGCCCCGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp GGGAGTGGAAGCATTCTCTGGAATACTTTCCCTGGGCCCTTAAAGTaGCTTTTTGGATTGGAAAGTCACAGTCTACTTTGCACATATCCT +
Preference number: 1 (lower is better)
Translates to: GSGSILWNTFPGPLK*LFGLESHSLLCTYP
Trigger: AGGATATGTGCAAAGTAGACTGTGACTTTCCAATCCAAAAAGCCACTTTAAGGGCCCAGGGAAAGTATTCCAGAGAATGCTTCCACTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 90 bp AATTTCCAGTCCACACAATATGAGGCAGTTTGTAATAAGACTCGGTaGAAATCCTGTCTCTGCAACTTGGAAGCTGTGCAGCTATGGGCA +
Preference number: 1 (lower is better)
Translates to: NFQSTQYEAVCNKTR*KSCLCNLEAVQLWA
Trigger: TGCCCATAGCTGCACAGCTTCCAAGTTGCAGAGACAGGATTTTCACCGAGTCTTATTACAAACTGCCTCATATTGTGTGGACTGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp TTACCGTGGAAAACACACAGGTTGGAAACAGTGACCTCTGCTTCATaGTTCCTGGTTTCTGACAAAGTTAATCTTTCACCATTGGTGTGC +
Preference number: 1 (lower is better)
Translates to: LPWKTHRLETVTSAS*FLVSDKVNLSPLVC
Trigger: GCACACCAATGGTGAAAGATTAACTTTGTCAGAAACCAGGAACCATGAAGCAGAGGTCACTGTTTCCAACCTGTGTGTTTTCCACGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp GCTATGGAGTCTGGTCAAAGAGAGGGGAGAGAGAATGGAGAATTTTaGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTTGCA +
Preference number: 1 (lower is better)
Translates to: AMESGQREGRENGEF*CLLSLRRQIVHAVA
Trigger: TGCAACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAATTCTCCATTCTCTCTCCCCTCTCTTTGACCAGACTCCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR GCA 90 bp CTTATCACTCAGAAGACAAATAGTACATGCAGTTGCACATGTGGTTaGAAGTTTTCCATGCTTTGCCCATTTCCATGTTGGTATTGGCAG +
Preference number: 1 (lower is better)
Translates to: LITQKTNSTCSCTCG*KFSMLCPFPCWYWQ
Trigger: CTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCATGTACTATTTGTCTTCTGAGTGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR GCA 90 bp ATTTTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTTaGACATGTGGTTGCAAGTTTTCCATGCTTTGCCCATTTCCATGT +
Preference number: 1 (lower is better)
Translates to: ILVPLITQKTNSTCS*TCGCKFSMLCPFPC
Trigger: ACATGGAAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR GCA 90 bp TGGAGAATTTTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATaGAGTTGCACATGTGGTTGCAAGTTTTCCATGCTTTGCCCATTT +
Preference number: 1 (lower is better)
Translates to: WRILVPLITQKTNST*SCTCGCKFSMLCPF
Trigger: AAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAATTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR CCA 90 bp CATTTGCATTCAAATTTCTGTGTGGACATATGTTTTAATTTCCCTTaGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACA +
Preference number: 1 (lower is better)
Translates to: HLHSNFCVDICFNFP*GGCQLPWKTHRLET
Trigger: TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATTAAAACATATGTCCACACAGAAATTTGAATGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp GTTCATCGATTCATCCACTGTGGAACATTGGGGCTGTTTCAGCTTTaGGCTATTATGAGTAATGCTGCTATGAACATTTGCATTCAAATT +
Preference number: 1 (lower is better)
Translates to: VHRFIHCGTLGLFQL*AIMSNAAMNICIQI
Trigger: AATTTGAATGCAAATGTTCATAGCAGCATTACTCATAATAGCCCAAAGCTGAAACAGCCCCAATGTTCCACAGTGGATGAATCGATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 90 bp TTGAAAATACACAGTAAATTATTGTTAGCGATAGTCACCCTACAGTaGCGCCAAACACTAGACTCCTATCTTGCTGCAAATTTGATTCCA +
Preference number: 1 (lower is better)
Translates to: LKIHSKLLLAIVTLQ*RQTLDSYLAANLIP
Trigger: TGGAATCAAATTTGCAGCAAGATAGGAGTCTAGTGTTTGGCGGCACTGTAGGGTGACTATCGCTAACAATAATTTACTGTGTATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp GTTTGCTTATTAGGACCTTTCATATACATGGAATCCTACAACATGTaGCTCTTTGTCTCTGGTTTCTTTCCCCTGGCACAATATTTTCAA +
Preference number: 1 (lower is better)
Translates to: VCLLGPFIYMESYNM*LFVSGFFPLAQYFQ
Trigger: TTGAAAATATTGTGCCAGGGGAAAGAAACCAGAGACAAAGAGCCACATGTTGTAGGATTCCATGTATATGAAAGGTCCTAATAAGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 90 bp ATTATGAGTAATGCTGCTATGAACATTTGCATTCAAATTTCTGTGTaGACATATGTTTTAATTTCCCTTGGGGAGGCTGCCAATTACCGT +
Preference number: 1 (lower is better)
Translates to: IMSNAAMNICIQISV*TYVLISLGEAANYR
Trigger: ACGGTAATTGGCAGCCTCCCCAAGGGAAATTAAAACATATGTCCACACAGAAATTTGAATGCAAATGTTCATAGCAGCATTACTCATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCGCCTCTCCGAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPASPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTCGGAGAGGC...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR GCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCCTTTGTCACCCAGGCTaGAGTGGCTCGACCTCGGCT +
Preference number: 2 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPLCHPG*SGSTSA
Trigger: AGCCGAGGTCGAGCCACTGCAGCCTGGGTGACAAAG...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR GCA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGCTTTGTCACCCAGGCTaGAGTGGCTCGACCTCGGCT +
Preference number: 2 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQLCHPG*SGSTSA
Trigger: AGCCGAGGTCGAGCCACTGCAGCCTGGGTGACAAAG...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR TCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCCCACCGGTGAGAGGCTaGCCGCGCATTCTAAAGCAC +
Preference number: 2 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSPPVRG*PRILKH
Trigger: GTGCTTTAGAATGCGCGGTCAGCCTCTCACCGGTGG...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCGACAGGGTTTCACCGTaGTCTCGAACTCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPDRVSP*SRTPDL
Trigger: GAGGTCAGGAGTTCGAGACCACGGTGAAACCCTGTC...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR CCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCAGCTCAGGAATCCCATaGTGCCCTGACCCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSSSGIP*CPDPFS
Trigger: GCTGAAGGGGTCAGGGCACCATGGGATTCCTGAGCT...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCGAGTCCCAGTATCGGTaGTGCCACCTTTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSESQYR*CHLSAS
Trigger: GCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCCATGGAGCTTACCCCTaGGTCTCCACATGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSHGAYP*VSTCCH
Trigger: GTGACAGCATGTGGAGACTCAGGGGTAAGCTCCATG...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCTGGTGTCTGAGGTaGCCTTTTATTCCCCTAGGT +
Preference number: 2 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQTWCLR*PFIPLG
Trigger: ACCTAGGGGAATAAAAGGTCACCTCAGACACCAGGT...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR GCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGGAGGCTTCCTGCCCATaGGGGGAGTGGAAGCATTCT +
Preference number: 2 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEEASCP*GEWKHS
Trigger: AGAATGCTTCCACTCCCCGCATGGGCAGGAAGCCTC...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp AACGCGGTTTTCATGTCCAAACAGGATGGAGACCCGGGACCCTTTGAGAACATCACAGCAGGCGACCACTaGGGGAGAAGTCCACGCTGG +
Preference number: 2 (lower is better)
Translates to: NAVFMSKQDGDPGPFENITAGDH*GRSPRW
Trigger: CCAGCGTGGACTTCTCCCTCAGTGGTCGCCTGCTGT...GATGTTCTCAAAGGGTCCCGGGTCTCCATCCTGTTTGGACATGAAAACCGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR-3UTR TCA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGGAAAAATACTGTACTTaGAGGTATTCTCGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQEKYCT*RYSRSA
Trigger: AGCACTGCGAGAATACCTTCAAGTACAGTATTTTTC...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR CCA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCTGCCCATGCGGGGAGTaGAAGCATTCTCTGGAATAC +
Preference number: 2 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSCPCGE*KHSLEY
Trigger: GTATTCCAGAGAATGCTTCCACTCCCCGCATGGGCA...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CCA 90 bp CCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTGCCCAGTGCCCATTTCCATGTTaGTATTGGCAGCCCCTATGG +
Preference number: 2 (lower is better)
Translates to: PKPDLQGDQTASQGSSAQCPFPC*YWQPLW
Trigger: CCATAGGGGCTGCCAATACCAACATGGAAATGGGCA...CTGGGCAGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR TCA 90 bp TGCATGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTCTGCAATGGGCTGGCTaGGCTGTTCAAACACGGATA +
Preference number: 2 (lower is better)
Translates to: CMPKPDLQGDQTASQGSSLQWAG*AVQTRI
Trigger: TATCCGTGTTTGAACAGCTCAGCCAGCCCATTGCAG...AGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR TCA 90 bp GTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTTGCCAAGCTCTTCCAAGGCAAAAGATGGCCTGGCTaGTTTTGGACCGAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: VALLNHPVTSFFAKLFQGKRWPG*FWTEWP
Trigger: GGGCCACTCGGTCCAAAATCAGCCAGGCCATCTTTT...GCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR GCA 90 bp GTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTTGCCAAGCTCTTCCAAGGCTTTCTCGTGCCTTCCTaGACTTCTGGGAGCCGGAAG +
Preference number: 2 (lower is better)
Translates to: VALLNHPVTSFFAKLFQGFLVPS*TSGSRK
Trigger: CTTCCGGCTCCCAGAAGTGCAGGAAGGCACGAGAAA...GCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR GCA 90 bp GATGGAGACCCGGGACCCTTTGAGAACATCCCAGACGTTGATAGTGTAATCATTGGCAACCTCCCTATCTaGCCGCAGGTCATAGAGGCG +
Preference number: 2 (lower is better)
Translates to: DGDPGPFENIPDVDSVIIGNLPI*PQVIEA
Trigger: CGCCTCTATGACCTGCGGGCAGATAGGGAGGTTGCC...AATGATTACACTATCAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR-3UTR GCA 90 bp TCATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGGCTATGGAGTCTGGTCAATCCGTAGAGGCAACTaGTTGCAGGGATACATGGAG +
Preference number: 2 (lower is better)
Translates to: SSSPPSTCSFPQGYGVWSIRRGN*LQGYME
Trigger: CTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGAT...TGACCAGACTCCATAGCCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR CCA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACAGCCTTCCTGCACTTCTaGGAGCCGGAAGGCACAGTG +
Preference number: 2 (lower is better)
Translates to: NFPWGGCQLPWKTHRLETAFLHF*EPEGTV
Trigger: CACTGTGCCTTCCGGCTCCCAGAAGTGCAGGAAGGC...TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CCA 90 bp CGTAGAGTGCTAACGCGGTTTTCATGTCCAAACAGGATGGAGACCCGGGACCCTCAAAGGCATCTCCACTaGGGTAGTACCTGCGATACT +
Preference number: 2 (lower is better)
Translates to: RRVLTRFSCPNRMETRDPQRHLH*GSTCDT
Trigger: AGTATCGCAGGTACTACCCCAGTGGAGATGCCTTTG...AGGGTCCCGGGTCTCCATCCTGTTTGGACATGAAAACCGCGTTAGCACTCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR CAA 90 bp CTTTCCCTAGGGTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTaGCCAAGCTCTTCCAAGGCCCTTAGTGGTTTCTGGGAGGTCTCA +
Preference number: 2 (lower is better)
Translates to: LSLGWLSSIILSPLS*PSSSKALSGFWEVS
Trigger: TGAGACCTCCCAGAAACCACTAAGGGCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCACCCTAGGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCACGCTTAGTGACCTGTaGGCCATGGGTTGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: ISTSRGRFQASQCTSRNITLSDL*AMGCSP
Trigger: AGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGT...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR TCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGCTGAACAAGCAGTTGTaGGGGTGGGCCTGGCACACC +
Preference number: 2 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLLNKQL*GWAWHT
Trigger: GGTGTGCCAGGCCCACCCTCACAACTGCTTGTTCAG...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR GCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGTTCCAGGCATCACAGTaGACATCGAGAAATATCAGA +
Preference number: 2 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEFQASQ*TSRNIR
Trigger: TCTGATATTTCTCGATGTGCACTGTGATGCCTGGAA...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR GCA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACATCAGGAATCCCATGGTaGCCTGACCCCTTCAGCACC +
Preference number: 2 (lower is better)
Translates to: NFPWGGCQLPWKTHRLETSGIPW*PDPFST
Trigger: GGTGCTGAAGGGGTCAGGGCACCATGGGATTCCTGA...TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR GCA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACACACTGCGAGAGCGCATaGTCACAGCGAAGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: NFPWGGCQLPWKTHRLETHCESA*SQRRRL
Trigger: AAGCCTCCTTCGCTGTGAGCATGCGCTCTCGCAGTG...TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR GCA 90 bp TGCATGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTGTAGAGGCAACTGCTTaGAGGGATACATGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: CMPKPDLQGDQTASQGSSVEATA*RDTWRE
Trigger: TTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTAC...AGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR GCA 90 bp GCAGCCTCATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGGCTATGGAGTCAGTTGCACATGTGGTTaGAAGTTTTCCATGCTTTGC +
Preference number: 2 (lower is better)
Translates to: AASSSPPSTCSFPQGYGVSCTCG*KFSMLC
Trigger: GCAAAGCATGGAAAACTTGCAACCACATGTGCAACT...GACTCCATAGCCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATGAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR CCA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACAGGGGCTGCCTATGGATaGGGAGGAGATGGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: NFPWGGCQLPWKTHRLETGAAYG*GGDGEK
Trigger: TTTCTCCCCATCTCCTCCCCATCCATAGGCAGCCCC...TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTGCTGAATTCTACTGGTaGCAGAATGAGTTGAGGCTA +
Preference number: 2 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSAEFYW*QNELRL
Trigger: TAGCCTCAACTCATTCTGTCACCAGTAGAATTCAGC...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR GCA 90 bp GCAGCCTCATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGGCTATGGAGTCAAGACAAATAGTACATaGAGTTGCACATGTGGTTGC +
Preference number: 2 (lower is better)
Translates to: AASSSPPSTCSFPQGYGVKTNST*SCTCGC
Trigger: GCAACCACATGTGCAACTGCATGTACTATTTGTCTT...GACTCCATAGCCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATGAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR CCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAGTGACCTGTGAGCCATaGGTTGCTCCCCTAAGCTAC +
Preference number: 2 (lower is better)
Translates to: HKISTSRGRFQASQCTSRVTCEP*VAPLSY
Trigger: GTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCAC...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR CCA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGAGCCCAGCTCCAGCTCTaGAAGAGTCTCTCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGAQLQL*KSLSEE
Trigger: CTCCTCAGAGAGACTCTTCCAGAGCTGGAGCTGGGC...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CCA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACAGCCCTTAGTGGTTTCTaGGAGGTCTCACACAGAGGG +
Preference number: 2 (lower is better)
Translates to: NFPWGGCQLPWKTHRLETALSGF*EVSHRG
Trigger: CCCTCTGTGTGAGACCTCCCAGAAACCACTAAGGGC...TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 90 bp GCAGGAACCTGCCATGGGTGGGACGATTCTTCTCAGCAGGCAAGTTaGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: AGTCHGWDDSSQQAS*GNEDLQIPTQSALP
Trigger: TGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAAACTTGCCTGCTGAGAAGAATCGTCCCACCCATGGCAGGTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp TCGGGGGAAACTCGTAGAGTGCTAACGCGGTTTTCATGTCCAAACAGGATGGAGGATACTTTTGGCAAATaGCTTCCTCTTGCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: SGETRRVLTRFSCPNRMEDTFGK*LPLAQP
Trigger: AGGCTGGGCAAGAGGAAGTCATTTGCCAAAAGTATC...CTCCATCCTGTTTGGACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR-3UTR CCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTGTGACCTGTGAGCCATaGGTTGCTCCCCTAAGCTAC +
Preference number: 2 (lower is better)
Translates to: LPEEGSRHHSAHREISDFVTCEP*VAPLSY
Trigger: GTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCAC...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR CCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTCCAGTCCTGTCTTATaGCTGTGCCCAGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLSSPVL*LCPAPA
Trigger: AGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGA...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CCA 90 bp CTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTCTCCAAACATGGAACCTaGAATGTGCTTCCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: LQNTIYPMELTPESPHAVSKHGT*NVLPWA
Trigger: GGCCCAGGGAAGCACATTCCAGGTTCCATGTTTGGA...GACAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 90 bp TTGCACATGTGGTTGCAAGTTTTCCATGCTTTGCCCATTTCCATGTaGGTATTGGCAGCCCCTATGGTGGCTCTAATTGTCCTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: LHMWLQVFHALPISM*VLAAPMVALIVLLG
Trigger: CCCCAAGAGGACAATTAGAGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR TCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAACGCTTAGTGACCTGTaGGCCATGGGTTGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: FGIGICFYHRPVTSPQSITLSDL*AMGCSP
Trigger: AGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR TCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGTATTCTCGCAGTGCTaGAGGCTCACACTAGTGTAT +
Preference number: 2 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQVFSQC*RLTLVY
Trigger: ATACACTAGTGTGAGCCTTCAGCACTGCGAGAATAC...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR GCA 90 bp AACGCGGTTTTCATGTCCAAACAGGATGGAGACCCGGGACCCTTTGAGAACATCGAAGTCCACGCTGGATaGTCCAAATATGATGCTTTC +
Preference number: 2 (lower is better)
Translates to: NAVFMSKQDGDPGPFENIEVHAG*SKYDAF
Trigger: GAAAGCATCATATTTGGAGCATCCAGCGTGGACTTC...GATGTTCTCAAAGGGTCCCGGGTCTCCATCCTGTTTGGACATGAAAACCGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR-3UTR CCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGGTGACCTGTGAGCCATaGGTTGCTCCCCTAAGCTAC +
Preference number: 2 (lower is better)
Translates to: EEGSRHHSAHREISDFKVVTCEP*VAPLSY
Trigger: GTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCAC...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR CAA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTaGGAAACAGTGACCTCTGCTTCATGGTTCCTGGTTTCTGACAAA +
Preference number: 2 (lower is better)
Translates to: NFPWGGCQLPWKTHR*ETVTSASWFLVSDK
Trigger: TTTGTCAGAAACCAGGAACCATGAAGCAGAGGTCACTGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CCA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGAAACGCCCTGTCCAAGTaGCACAGTGACATCATCATC +
Preference number: 2 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGNALSK*HSDIII
Trigger: GATGATGATGTCACTGTGCCACTTGGACAGGGCGTT...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAACGCTTAGTGACCTGTaGGCCATGGGTTGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSTLSDL*AMGCSP
Trigger: AGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGT...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR TCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAGCTGAATTCTACTGGTaGCAGAATGAGTTGAGGCTA +
Preference number: 2 (lower is better)
Translates to: HKISTSRGRFQASQCTSRAEFYW*QNELRL
Trigger: TAGCCTCAACTCATTCTGTCACCAGTAGAATTCAGC...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR TCA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATCTGGAAGAGTCTCTCTaGGGAGCAGGGCCTGGAGCT +
Preference number: 2 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNLEESL*GAGPGA
Trigger: AGCTCCAGGCCCTGCTCCTCAGAGAGACTCTTCCAG...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR GCA 90 bp ATAGTACATGCAGTTGCACATGTGGTTGCAAGTTTTCCATGCTTTGCCCATTTCCGAGAGGGGAATAAATaGTGCAATGGGCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: IVHAVAHVVASFPCFAHFREGNK*CNGLAE
Trigger: CTCAGCCAGCCCATTGCAGCATTTATTCCCCTCTCG...GAAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCATGTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR CCA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGACCCCTTCACCACAATTaGTTTGGTAGGTTTATCCCC +
Preference number: 2 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGPLHHN*FGRFIP
Trigger: GGGGATAAACCTACCAAACCAATTGTGGTGAAGGGG...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CCA 90 bp GATGGAGACCCGGGACCCTTTGAGAACATCCCAGACGTTGATAGTGTAATCATTTTTCTTTGGAATAGATaGCAACCTCCCTATCTGCCC +
Preference number: 2 (lower is better)
Translates to: DGDPGPFENIPDVDSVIIFLWNR*QPPYLP
Trigger: GGGCAGATAGGGAGGTTGCCATCTATTCCAAAGAAA...AATGATTACACTATCAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR CAA 90 bp GGCTATGGAGTCTGGTCAAAGAGAGGGGAGAGAGAATGGAGAATTTaGGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTTGC +
Preference number: 2 (lower is better)
Translates to: GYGVWSKRGEREWRI*VPLITQKTNSTCSC
Trigger: GCAACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAATTCTCCATTCTCTCTCCCCTCTCTTTGACCAGACTCCATAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGGTATTCTCGCAGTGCTaGAGGCTCACACTAGTGTAT +
Preference number: 2 (lower is better)
Translates to: EEGSRHHSAHREISDFKVVFSQC*RLTLVY
Trigger: ATACACTAGTGTGAGCCTTCAGCACTGCGAGAATAC...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR TCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGCTACTGGTGACAGAATaGGTTGAGGCTACTATAATT +
Preference number: 2 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQLLVTE*VEATII
Trigger: AATTATAGTAGCCTCAACTCATTCTGTCACCAGTAG...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR TCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGCTGAATTCTACTGGTaGCAGAATGAGTTGAGGCTA +
Preference number: 2 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRAEFYW*QNELRL
Trigger: TAGCCTCAACTCATTCTGTCACCAGTAGAATTCAGC...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR TCA 90 bp AAAGCAGTCCCATCGGGGGAAACTCGTAGAGTGCTAACGCGGTTTTCATGTCCATGGATGCTCCAAATATaGTGCTTTCTTTGGAATAGA +
Preference number: 2 (lower is better)
Translates to: KAVPSGETRRVLTRFSCPWMLQI*CFLWNR
Trigger: TCTATTCCAAAGAAAGCATCATATTTGGAGCATCCA...TGGACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGATGGGACTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR-3UTR GCA 90 bp TTAATACACAATACTCTTTATTGTAAATGCCAATGCAATGCAGGTGTTCCAGCATCTGCCCAGTCCCACTaGAGCCTCATCTTCCCCACC +
Preference number: 2 (lower is better)
Translates to: LIHNTLYCKCQCNAGVPASAQSH*SLIFPT
Trigger: GGTGGGGAAGATGAGGCTGCAGTGGGACTGGGCAGA...TGCTGGAACACCTGCATTGCATTGGCATTTACAATAAAGAGTATTGTGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR CCA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGACCTGGGCCCTTAAAGTaGCTTTTTGGATTGGAAAGT +
Preference number: 2 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGPGPLK*LFGLES
Trigger: ACTTTCCAATCCAAAAAGCCACTTTAAGGGCCCAGG...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 90 bp GTGGATGCGCCATATTTTGTTCATCGATTCATCCACTGTGGAACATaGGGGCTGTTTCAGCTTTGGGCTATTATGAGTAATGCTGCTATG +
Preference number: 2 (lower is better)
Translates to: VDAPYFVHRFIHCGT*GLFQLWAIMSNAAM
Trigger: CATAGCAGCATTACTCATAATAGCCCAAAGCTGAAACAGCCCCAATGTTCCACAGTGGATGAATCGATGAACAAAATATGGCGCATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 90 bp ATTCTCTGGAATACTTTCCCTGGGCCCTTAAAGTGGCTTTTTGGATaGGAAAGTCACAGTCTACTTTGCACATATCCTGAAGATGCTCTC +
Preference number: 2 (lower is better)
Translates to: ILWNTFPGPLKWLFG*ESHSLLCTYPEDAL
Trigger: GAGAGCATCTTCAGGATATGTGCAAAGTAGACTGTGACTTTCCAATCCAAAAAGCCACTTTAAGGGCCCAGGGAAAGTATTCCAGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGAGAAAAATACTGTACTTaGAGGTATTCTCGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGEKYCT*RYSRSA
Trigger: AGCACTGCGAGAATACCTTCAAGTACAGTATTTTTC...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCGGTGACAGAATGAGTTaGGGCTACTATAATTTAGAA +
Preference number: 2 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIGDRMS*GYYNLE
Trigger: TTCTAAATTATAGTAGCCTCAACTCATTCTGTCACC...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR TCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGACTACTGGTGACAGAATaGGTTGAGGCTACTATAATT +
Preference number: 2 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRLLVTE*VEATII
Trigger: AATTATAGTAGCCTCAACTCATTCTGTCACCAGTAG...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR CCA 90 bp GAAGTCCACGCTGGATGCTCCAAATATGATGCTTTCTTTGGAATAGATGGCAACTACCTGCGATACTTTTaGCAAATGACTTCCTCTTGC +
Preference number: 2 (lower is better)
Translates to: EVHAGCSKYDAFFGIDGNYLRYF*QMTSSC
Trigger: GCAAGAGGAAGTCATTTGCCAAAAGTATCGCAGGTA...GTTGCCATCTATTCCAAAGAAAGCATCATATTTGGAGCATCCAGCGTGGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR CAA 90 bp AGAAGACTTTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATaGGCTTTCCCTTCAATTCAGAGAAAACGCCCTGTCCAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: RRLFFALRSICLQTP*AFPSIQRKRPVQVA
Trigger: TGCCACTTGGACAGGGCGTTTTCTCTGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAAAGTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR CAA 90 bp TCTGGTTTCTTTCCCCTGGCACAATATTTTCAAGGTTCATCCATGTaGCAGCATGTGTCCACGCTTTCTTTCTTTGTATTCCATTCTGTG +
Preference number: 2 (lower is better)
Translates to: SGFFPLAQYFQGSSM*QHVSTLSFFVFHSV
Trigger: CACAGAATGGAATACAAAGAAAGAAAGCGTGGACACATGCTGCAACATGGATGAACCTTGAAAATATTGTGCCAGGGGAAAGAAACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGCTACTGGTGACAGAATaGGTTGAGGCTACTATAATT +
Preference number: 2 (lower is better)
Translates to: EEGSRHHSAHREISDFKVLLVTE*VEATII
Trigger: AATTATAGTAGCCTCAACTCATTCTGTCACCAGTAG...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR CAA 90 bp TTCAAGGTTCATCCATGTTGCAGCATGTGTCCACGCTTTCTTTCTTaGTATTCCATTCTGTGGATGCGCCATATTTTGTTCATCGATTCA +
Preference number: 2 (lower is better)
Translates to: FKVHPCCSMCPRFLS*YSILWMRHILFIDS
Trigger: TGAATCGATGAACAAAATATGGCGCATCCACAGAATGGAATACAAAGAAAGAAAGCGTGGACACATGCTGCAACATGGATGAACCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGGGTGACAGAATGAGTTaGGGCTACTATAATTTAGAA +
Preference number: 2 (lower is better)
Translates to: EEGSRHHSAHREISDFKVGDRMS*GYYNLE
Trigger: TTCTAAATTATAGTAGCCTCAACTCATTCTGTCACC...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR CCA 90 bp TTAATACACAATACTCTTTATTGTAAATGCCAATGCAATGCAGGTGTTCCAGCATTTCCATGTTGGTATTaGCAGCCCCTATGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: LIHNTLYCKCQCNAGVPAFPCWY*QPLWWL
Trigger: GAGCCACCATAGGGGCTGCCAATACCAACATGGAAA...TGCTGGAACACCTGCATTGCATTGGCATTTACAATAAAGAGTATTGTGTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR CCA 90 bp ACAATACTCTTTATTGTAAATGCCAATGCAATGCAGGTGTTCCAGCATACCTGCATGCAGTTGCACATGTaGTTGCAAGTTTTCCATGCT +
Preference number: 2 (lower is better)
Translates to: TILFIVNANAMQVFQHTCMQLHM*LQVFHA
Trigger: AGCATGGAAAACTTGCAACCACATGTGCAACTGCAT...GCAGGTATGCTGGAACACCTGCATTGCATTGGCATTTACAATAAAGAGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR CCA 90 bp CACAATACTCTTTATTGTAAATGCCAATGCAATGCAGGTGTTCCAGCATACCTGGAGAATGGAGAATTTTaGTGCCTCTTATCACTCAGA +
Preference number: 2 (lower is better)
Translates to: HNTLYCKCQCNAGVPAYLENGEF*CLLSLR
Trigger: TCTGAGTGATAAGAGGCACCAAAATTCTCCATTCTC...CAGGTATGCTGGAACACCTGCATTGCATTGGCATTTACAATAAAGAGTATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR GCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTTCCAGGCATCACAGTaGACATCGAGAAATATCAGA +
Preference number: 2 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNFQASQ*TSRNIR
Trigger: TCTGATATTTCTCGATGTGCACTGTGATGCCTGGAA...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR TCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAGGTGACAGAATGAGTTaGGGCTACTATAATTTAGAA +
Preference number: 2 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSGDRMS*GYYNLE
Trigger: TTCTAAATTATAGTAGCCTCAACTCATTCTGTCACC...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR GCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCATTTGGAATTGGAATTTaGTTCTATCACAGACCAGTC +
Preference number: 2 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSFGIGI*FYHRPV
Trigger: GACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR GCA 72 bp GCCCACCTCTGGCTCGCCTGGGAGAAGAGGGACGGCTaGCAGGGCCCCACCGGTGAGAGGCTGACCGCGCAT +
Preference number: 3 (lower is better)
Translates to: AHLWLAWEKRDG*QGPTGERLTAH
Trigger: ATGCGCGGTCAGCCTCTCACCGGTGGGGCCCTGGCAGCCGTCCCTCTTCTCCCAGGCGAGCCAGAGGTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 72 bp ACCTGTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTaGAGCCAGAACCTGCCGGCAGACCCCAGGCCACCG +
Preference number: 3 (lower is better)
Translates to: TCPGDKVHAAFR*SQNLPADPRPP
Trigger: CGGTGGCCTGGGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGACAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR GCA 72 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTaGCTCTCTGGGACTTCCTCCACCGACCGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: GHRPQLVPSPSD*LSGTSSTDRGC
Trigger: ACAGCCCCGGTCGGTGGAGGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 72 bp CAGGGCCAGGAAAGGAGACCTGTCCAGGGGACAAGGTaGACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGG +
Preference number: 3 (lower is better)
Translates to: QGQERRPVQGTR*TQPSGAARTCR
Trigger: CCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGACAGGTCTCCTTTCCTGGCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR GCA 72 bp TGTCACCCAGGCTGCAGTGGCTCGACCTCGGCTCACTaGAAGCTCCACCTCCCGGGTTCACGCCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: CHPGCSGSTSAH*KLHLPGSRHSP
Trigger: AGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGGTCGAGCCACTGCAGCCTGGGTGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR GCA 72 bp TCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATaGTCACAGCGAAGGAGGCTTCCTGCCCATGCGGGG +
Preference number: 3 (lower is better)
Translates to: SANPDSTHCESA*SQRRRLPAHAG
Trigger: CCCCGCATGGGCAGGAAGCCTCCTTCGCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 72 bp AGAGGGACGGCTGCCAGGGCCCCACCGGTGAGAGGCTaGCCGCGCATTCTAAAGCACTGGACTTGGCTTCAT +
Preference number: 3 (lower is better)
Translates to: RGTAARAPPVRG*PRILKHWTWLH
Trigger: ATGAAGCCAAGTCCAGTGCTTTAGAATGCGCGGTCAGCCTCTCACCGGTGGGGCCCTGGCAGCCGTCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTaGCCTGGCAACTATGAGAGCCCGGGACACAAAGGC +
Preference number: 3 (lower is better)
Translates to: ESQYRWCHLSAS*PGNYESPGHKG
Trigger: GCCTTTGTGTCCCGGGCTCTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 72 bp GTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATaGGAGCCCGGGACACAAAGGCCCTTACAACCCTGT +
Preference number: 3 (lower is better)
Translates to: VVPPFSQLAWQL*EPGTQRPLQPC
Trigger: ACAGGGTTGTAAGGGCCTTTGTGTCCCGGGCTCTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 72 bp TTCCTCCACCGACCGGGGCTGTCCCAAAGCCTCCTCTaGAGGCTTTCCCTAGGGTGGCTCTCCTCAATCATC +
Preference number: 3 (lower is better)
Translates to: FLHRPGLSQSLL*RLSLGWLSSII
Trigger: GATGATTGAGGAGAGCCACCCTAGGGAAAGCCTTCAGAGGAGGCTTTGGGACAGCCCCGGTCGGTGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp GGGCCTGGCACACCCCTGGATGTTTACAGGAGCATCTaGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: GPGTPLDVYRSI*SSPVLWLCPAP
Trigger: TGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAAACATCCAGGGGTGTGCCAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR TCA 72 bp TGGCTGATTTTGGACCGAGTGGCCCATCACGATACCTaGACAAGCAGTTGTGAGGGTGGGCCTGGCACACCC +
Preference number: 3 (lower is better)
Translates to: WLILDRVAHHDT*TSSCEGGPGTP
Trigger: GGGTGTGCCAGGCCCACCCTCACAACTGCTTGTTCAGGTATCGTGATGGGCCACTCGGTCCAAAATCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR CCA 72 bp CTCACAGCGAAGGAGGCTTCCTGCCCATGCGGGGAGTaGAAGCATTCTCTGGAATACTTTCCCTGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: LTAKEASCPCGE*KHSLEYFPWAL
Trigger: AAGGGCCCAGGGAAAGTATTCCAGAGAATGCTTCCACTCCCCGCATGGGCAGGAAGCCTCCTTCGCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp TCAGTCATTTCATTTCTTTCACTGGGGTTGGCCCTGTaGCAGCCCACGGGAGGCCAGAGTCCCCTGTGGAGA +
Preference number: 3 (lower is better)
Translates to: SVISFLSLGLAL*QPTGGQSPLWR
Trigger: TCTCCACAGGGGACTCTGGCCTCCCGTGGGCTGCCACAGGGCCAACCCCAGTGAAAGAAATGAAATGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp GAACAAGCAGTTGTGAGGGTGGGCCTGGCACACCCCTaGATGTTTACAGGAGCATCTGGTCCAGTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: EQAVVRVGLAHP*MFTGASGPVLS
Trigger: AGACAGGACTGGACCAGATGCTCCTGTAAACATCCAGGGGTGTGCCAGGCCCACCCTCACAACTGCTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR GCA 72 bp TCAAGTATCTCATCAGCAAATCCCGACAGCACCCACTaGGAGAGCGCATGCTCACAGCGAAGGAGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: SSISSANPDSTH*ESACSQRRRLP
Trigger: AGGAAGCCTCCTTCGCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp AGACACTGGGCCCATTTCCTGAGCCCCTGCCCAGACTaGAATCTACTGGGACTAAAAAGCACTCTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: RHWAHFLSPCPD*NLLGLKSTLSG
Trigger: CCCAGAGAGAGTGCTTTTTAGTCCCAGTAGATTCCAGTCTGGGCAGGGGCTCAGGAAATGGGCCCAGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp ATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTaGGAATGGCCTGGGCCTCAGCCCCAGTCTTCTACC +
Preference number: 3 (lower is better)
Translates to: IYKSPLNQLFQA*EWPGPQPQSST
Trigger: GGTAGAAGACTGGGGCTGAGGCCCAGGCCATTCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp GAACATATTCAGTCATTTCATTTCTTTCACTGGGGTTaGCCCTGTGGCAGCCCACGGGAGGCCAGAGTCCCC +
Preference number: 3 (lower is better)
Translates to: EHIQSFHFFHWG*PCGSPREARVP
Trigger: GGGGACTCTGGCCTCCCGTGGGCTGCCACAGGGCCAACCCCAGTGAAAGAAATGAAATGACTGAATATGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CAA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCATTTGGAATTGGAATTaGCTTCTATCACAGACCAGT +
Preference number: 3 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPIWNWN*LLSQTS
Trigger: ACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAAT...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR-3UTR CAA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACAGAAGACTTTTCTTaGCTCTCAGAAGCATTTGTT +
Preference number: 3 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQTEDFS*LSEAFV
Trigger: AACAAATGCTTCTGAGAGCAAAGAAAAGTCTTCTGT...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR CCA 72 bp GGCTCCAGCCAAGTGCTGTCTAGAAGCAGGAGTCTGTaGTATGTCTGGAAGAGTGACCCAATTCTCTCCGGT +
Preference number: 3 (lower is better)
Translates to: GSSQVLSRSRSL*YVWKSDPILSG
Trigger: ACCGGAGAGAATTGGGTCACTCTTCCAGACATACCACAGACTCCTGCTTCTAGACAGCACTTGGCTGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp TCTTGGGGCGAGAGGGGAATAAATGCTGCAATGGGCTaGCTGAGCTGTTCAAACACGGATAGGCCTTCTTGG +
Preference number: 3 (lower is better)
Translates to: SWGERGINAAMG*LSCSNTDRPSW
Trigger: CCAAGAAGGCCTATCCGTGTTTGAACAGCTCAGCCAGCCCATTGCAGCATTTATTCCCCTCTCGCCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR-3UTR CAA 90 bp TGCATGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTTTGCCCATTTCCATGTaGGTATTGGCAGCCCCTATG +
Preference number: 3 (lower is better)
Translates to: CMPKPDLQGDQTASQGSSLPISM*VLAAPM
Trigger: CATAGGGGCTGCCAATACCAACATGGAAATGGGCAA...AGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR GCA 72 bp GGTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTTaGCAAGCTCTTCCAAGGCCCTTAGTGGTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: GGSPQSSCHLFL*QALPRPLVVSG
Trigger: CCCAGAAACCACTAAGGGCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 72 bp GATGCTTTCTTTGGAATAGATGGCAACCTCCCTATCTaGCCGCAGGTCATAGAGGCGACACGTAGCGTCATC +
Preference number: 3 (lower is better)
Translates to: DAFFGIDGNLPI*PQVIEATRSVI
Trigger: GATGACGCTACGTGTCGCCTCTATGACCTGCGGGCAGATAGGGAGGTTGCCATCTATTCCAAAGAAAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR CCA 72 bp AGGCTTCCTGCCCATGCGGGGAGTGGAAGCATTCTCTaGAATACTTTCCCTGGGCCCTTAAAGTGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: RLPAHAGSGSIL*NTFPGPLKWLF
Trigger: AAAAAGCCACTTTAAGGGCCCAGGGAAAGTATTCCAGAGAATGCTTCCACTCCCCGCATGGGCAGGAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CAA 90 bp ACGTGTTCATTCCCACAGGGCTATGGAGTCTGGTCAAAGAGAGGGGAGAGAGAACGTAGAGGCAACTGCTaGCAGGGATACATGGAGAGA +
Preference number: 3 (lower is better)
Translates to: TCSFPQGYGVWSKRGERERRGNC*QGYMER
Trigger: TCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACG...TTCTCTCTCCCCTCTCTTTGACCAGACTCCATAGCCCTGTGGGAATGAACACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR TCA 72 bp GCAGGCCTCACCAGGAATGACACCTGGTGTCTGAGGTaGCCTTTTATTCCCCTAGGTGCATGCCATCTTTTT +
Preference number: 3 (lower is better)
Translates to: AGLTRNDTWCLR*PFIPLGACHLF
Trigger: AAAAAGATGGCATGCACCTAGGGGAATAAAAGGTCACCTCAGACACCAGGTGTCATTCCTGGTGAGGCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR TCA 72 bp CATATATTCTGTGACCGTGACAGAGGTGGGTGTGAATaGAGGCCAGCCCTCTTATGTCACCAAGGCATCCCT +
Preference number: 3 (lower is better)
Translates to: HIFCDRDRGGCE*RPALLCHQGIP
Trigger: AGGGATGCCTTGGTGACATAAGAGGGCTGGCCTTCATTCACACCCACCTCTGTCACGGTCACAGAATATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 72 bp GTCTGGAAGAGTGACCCAATTCTCTCCGGTCACGGATaGGAGGGCAAGTGGTTTAGCATGGCAATCCTTACA +
Preference number: 3 (lower is better)
Translates to: VWKSDPILSGHG*EGKWFSMAILT
Trigger: TGTAAGGATTGCCATGCTAAACCACTTGCCCTCTCATCCGTGACCGGAGAGAATTGGGTCACTCTTCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CAA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTGTTTTAATAGTCATATaGGAGACGCTTAGTGACCTG +
Preference number: 3 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSVLIVI*ETLSDL
Trigger: CAGGTCACTAAGCGTCTCCAATATGACTATTAAAAC...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
3UTR GCA 72 bp TGCAGTTGCACATGTGGTTGCAAGTTTTCCATGCTTTaGCCATTTCCATGTTGGTATTGGCAGCCCCTATGG +
Preference number: 3 (lower is better)
Translates to: CSCTCGCKFSML*PFPCWYWQPLW
Trigger: CCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR GCA 72 bp GTACATGCAGTTGCACATGTGGTTGCAAGTTTTCCATaGTTTGCCCATTTCCATGTTGGTATTGGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: VHAVAHVVASFP*FAHFHVGIGSP
Trigger: GGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR CCA 72 bp GCCATGGGTGGGACGATTCTTCTCAGCAGGCAAGTTTaGGAAATGAAGATCTACAAATCCCCACTCAATCAG +
Preference number: 3 (lower is better)
Translates to: AMGGTILLSRQV*EMKIYKSPLNQ
Trigger: CTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAAACTTGCCTGCTGAGAAGAATCGTCCCACCCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp TCTCCGGTCACGGATGAGAGGGCAAGTGGTTTAGCATaGCAATCCTTACAAAGGATCCACAGAGACAAGATT +
Preference number: 3 (lower is better)
Translates to: SPVTDERASGLA*QSLQRIHRDKI
Trigger: AATCTTGTCTCTGTGGATCCTTTGTAAGGATTGCCATGCTAAACCACTTGCCCTCTCATCCGTGACCGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 72 bp GCCAATTACCGTGGAAAACACACAGGTTGGAAACAGTaGCCTCTGCTTCATGGTTCCTGGTTTCTGACAAAG +
Preference number: 3 (lower is better)
Translates to: ANYRGKHTGWKQ*PLLHGSWFLTK
Trigger: CTTTGTCAGAAACCAGGAACCATGAAGCAGAGGTCACTGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR TCA 72 bp GTTTTAATAGTCATATTGGAGACGCTTAGTGACCTGTaGGCCATGGGTTGCTCCCCTAAGCTACACTGCAAT +
Preference number: 3 (lower is better)
Translates to: VLIVILETLSDL*AMGCSPKLHCN
Trigger: ATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCTCCAATATGACTATTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR TCA 72 bp TGGATTGGAAAGTCACAGTCTACTTTGCACATATCCTaGAGATGCTCTCCACCTCTCCAAACATGGAACCTG +
Preference number: 3 (lower is better)
Translates to: WIGKSQSTLHIS*RCSPPLQTWNL
Trigger: CAGGTTCCATGTTTGGAGAGGTGGAGAGCATCTTCAGGATATGTGCAAAGTAGACTGTGACTTTCCAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CAA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGAAAAATACTGTACTaGAAGGTATTCTCGCAGTGC +
Preference number: 3 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIRKILY*KVFSQC
Trigger: GCACTGCGAGAATACCTTCAAGTACAGTATTTTTCT...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR CAA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAGAAAAATACTGTACTaGAAGGTATTCTCGCAGTGC +
Preference number: 3 (lower is better)
Translates to: HKISTSRGRFQASQCTSRRKILY*KVFSQC
Trigger: GCACTGCGAGAATACCTTCAAGTACAGTATTTTTCT...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR TCA 72 bp TCCACACAATATGAGGCAGTTTGTAATAAGACTCGGTaGAAATCCTGTCTCTGCAACTTGGAAGCTGTGCAG +
Preference number: 3 (lower is better)
Translates to: STQYEAVCNKTR*KSCLCNLEAVQ
Trigger: CTGCACAGCTTCCAAGTTGCAGAGACAGGATTTTCACCGAGTCTTATTACAAACTGCCTCATATTGTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp CTGGAATACTTTCCCTGGGCCCTTAAAGTGGCTTTTTaGATTGGAAAGTCACAGTCTACTTTGCACATATCC +
Preference number: 3 (lower is better)
Translates to: LEYFPWALKVAF*IGKSQSTLHIS
Trigger: GGATATGTGCAAAGTAGACTGTGACTTTCCAATCCAAAAAGCCACTTTAAGGGCCCAGGGAAAGTATTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp AGCATTCTCTGGAATACTTTCCCTGGGCCCTTAAAGTaGCTTTTTGGATTGGAAAGTCACAGTCTACTTTGC +
Preference number: 3 (lower is better)
Translates to: SILWNTFPGPLK*LFGLESHSLLC
Trigger: GCAAAGTAGACTGTGACTTTCCAATCCAAAAAGCCACTTTAAGGGCCCAGGGAAAGTATTCCAGAGAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp GGATGCGCCATATTTTGTTCATCGATTCATCCACTGTaGAACATTGGGGCTGTTTCAGCTTTGGGCTATTAT +
Preference number: 3 (lower is better)
Translates to: GCAIFCSSIHPL*NIGAVSALGYY
Trigger: ATAATAGCCCAAAGCTGAAACAGCCCCAATGTTCCACAGTGGATGAATCGATGAACAAAATATGGCGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CAA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACAATTTGGAATTGGAATTaGCTTCTATCACAGACCAGT +
Preference number: 3 (lower is better)
Translates to: NFPWGGCQLPWKTHRLETIWNWN*LLSQTS
Trigger: ACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAAT...TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CAA 90 bp CTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTCAATAAGTTTACTATCTaGTGTTCCCACACAGAAGAC +
Preference number: 3 (lower is better)
Translates to: LQNTIYPMELTPESPHAVNKFTI*CSHTED
Trigger: GTCTTCTGTGTGGGAACACAAGATAGTAAACTTATT...GACAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CAA 90 bp GAATGGAGAATTTTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTATTTCCATGTTGGTATaGGCAGCCCCTATGGTGGCT +
Preference number: 3 (lower is better)
Translates to: EWRILVPLITQKTNSTCSISMLV*AAPMVA
Trigger: AGCCACCATAGGGGCTGCCAATACCAACATGGAAAT...ACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAATTCTCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR GCA 72 bp AAGTGGCTTTTTGGATTGGAAAGTCACAGTCTACTTTaGACATATCCTGAAGATGCTCTCCACCTCTCCAAA +
Preference number: 3 (lower is better)
Translates to: KWLFGLESHSLL*TYPEDALHLSK
Trigger: TTTGGAGAGGTGGAGAGCATCTTCAGGATATGTGCAAAGTAGACTGTGACTTTCCAATCCAAAAAGCCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 72 bp GTCCACGCTTTCTTTCTTTGTATTCCATTCTGTGGATaGGCCATATTTTGTTCATCGATTCATCCACTGTGG +
Preference number: 3 (lower is better)
Translates to: VHAFFLCIPFCG*AIFCSSIHPLW
Trigger: CCACAGTGGATGAATCGATGAACAAAATATGGCGCATCCACAGAATGGAATACAAAGAAAGAAAGCGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 72 bp TTCCCCTGGCACAATATTTTCAAGGTTCATCCATGTTaGAGCATGTGTCCACGCTTTCTTTCTTTGTATTCC +
Preference number: 3 (lower is better)
Translates to: FPWHNIFKVHPC*SMCPRFLSLYS
Trigger: GGAATACAAAGAAAGAAAGCGTGGACACATGCTGCAACATGGATGAACCTTGAAAATATTGTGCCAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 72 bp ATGGTAAATCCTCTGGCAACGGTGACTATGCTCACTTaGCCCATTATCAGCCAAAACCAAAATGTGACAATA +
Preference number: 3 (lower is better)
Translates to: MVNPLATVTMLT*PIISQNQNVTI
Trigger: TATTGTCACATTTTGGTTTTGGCTGATAATGGGGCAAGTGAGCATAGTCACCGTTGCCAGAGGATTTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR GCA 72 bp CCTCTTATCACTCAGAAGACAAATAGTACATGCAGTTaGACATGTGGTTGCAAGTTTTCCATGCTTTGCCCA +
Preference number: 3 (lower is better)
Translates to: PLITQKTNSTCS*TCGCKFSMLCP
Trigger: TGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR CCA 72 bp TTCATCCACTGTGGAACATTGGGGCTGTTTCAGCTTTaGGCTATTATGAGTAATGCTGCTATGAACATTTGC +
Preference number: 3 (lower is better)
Translates to: FIHCGTLGLFQL*AIMSNAAMNIC
Trigger: GCAAATGTTCATAGCAGCATTACTCATAATAGCCCAAAGCTGAAACAGCCCCAATGTTCCACAGTGGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CAA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGGTTTTAATAGTCATATaGGAGACGCTTAGTGACCTG +
Preference number: 3 (lower is better)
Translates to: EEGSRHHSAHREISDFKVVLIVI*ETLSDL
Trigger: CAGGTCACTAAGCGTCTCCAATATGACTATTAAAAC...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR GCA 72 bp TTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATaGAGTTGCACATGTGGTTGCAAGTTTTCCATGCTT +
Preference number: 3 (lower is better)
Translates to: LVPLITQKTNST*SCTCGCKFSML
Trigger: AAGCATGGAAAACTTGCAACCACATGTGCAACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR CCA 72 bp AAAACACACAGGTTGGAAACAGTGACCTCTGCTTCATaGTTCCTGGTTTCTGACAAAGTTAATCTTTCACCA +
Preference number: 3 (lower is better)
Translates to: KTHRLETVTSAS*FLVSDKVNLSP
Trigger: TGGTGAAAGATTAACTTTGTCAGAAACCAGGAACCATGAAGCAGAGGTCACTGTTTCCAACCTGTGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR-3UTR CAA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAGTTTTAATAGTCATATaGGAGACGCTTAGTGACCTG +
Preference number: 3 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIVLIVI*ETLSDL
Trigger: CAGGTCACTAAGCGTCTCCAATATGACTATTAAAAC...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
3UTR-3UTR CAA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATTCCAGGCGTCCTCTTTaGAAAGGATTTTCAGGTCAC +
Preference number: 3 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNSRRPL*KGFSGH
Trigger: GTGACCTGAAAATCCTTTCAAAAGAGGACGCCTGGA...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CCA 72 bp ATGTGTCCACGCTTTCTTTCTTTGTATTCCATTCTGTaGATGCGCCATATTTTGTTCATCGATTCATCCACT +
Preference number: 3 (lower is better)
Translates to: MCPRFLSLYSIL*MRHILFIDSST
Trigger: AGTGGATGAATCGATGAACAAAATATGGCGCATCCACAGAATGGAATACAAAGAAAGAAAGCGTGGACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CCCGCTCTCCACGTCCCACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATAGCGGAGAGCGGGAATaGGCTGAGCCGCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PALHVPQGTCAIAARCQDSGERE*AEPRRA
Trigger: CGCCCGCCGCGGCTCAGCGCATTCCCGCTCTCCGCT...ATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGGACGTGGAGAGCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR GCA 90 bp TGCCCGCTCTCCACGTCCCACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGGTGCAGCCCCTCGGTTaGCATCTTCGCGCGGGGACG +
Preference number: 4 (lower is better)
Translates to: CPLSTSHRAHVPSPLAVRVQPLG*HLRAGT
Trigger: CGTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCAC...CCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGGACGTGGAGAGCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR TCA 90 bp TGCCCGCTCTCCACGTCCCACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGCCTCCAGCTTGCCCTTaGGGCTCTCGGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: CPLSTSHRAHVPSPLAVRPPACP*GSRPRS
Trigger: AGAGCGAGGCCGAGAGCCTCAAGGGCAAGCTGGAGG...CCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGGACGTGGAGAGCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR TCA 90 bp TCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGGTGAAGCTGCAGGCCGACAGAGCGGGAATGCGCTaGGCCGCGGCGGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SPLAVRICMSELVKLQADRAGMR*AAAGAA
Trigger: AGCGGCGCCCGCCGCGGCTCAGCGCATTCCCGCTCT...GTCGGCCTGCAGCTTCACCAACTCTGACATGCAGATCCTGACAGCGAGCGGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR GCA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGGGTGCAGCCAGAACCTaGCGGCAGACCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQGAART*RQTPGH
Trigger: GTGGCCTGGGGTCTGCCGGCAGGTTCTGGCTGCACC...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGCCACAGAGCAGATGGTaGGAGGTGAGGACCAGCGCG +
Preference number: 4 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQPQSRW*EVRTSA
Trigger: CGCGCTGGTCCTCACCTCTCACCATCTGCTCTGTGG...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCCCCGACAGCACCCACTaGGAGAGCGCATGCTCACAG +
Preference number: 4 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPPDSTH*ESACSQ
Trigger: CTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGG...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCGAGCTGGCCAGACACTaGGCCCATTTCCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPELARH*AHFLSP
Trigger: GGGGCTCAGGAAATGGGCCCAGTGTCTGGCCAGCTC...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CCCGCTCTCCACGTCCCACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATAGCGTCTCGTTCTCGTaGAGCCCCTCGGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: PALHVPQGTCAIAARCQDSVSFS*SPSVAI
Trigger: GATGGCAACCGAGGGGCTGCACGAGAACGAGACGCT...ATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGGACGTGGAGAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR CCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCTCAGCCCCATGTCCGTaGAAGCTCTGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPSAPCP*KLCSSC
Trigger: GCAGCTGCTGCAGAGCTTCCACGGACATGGGGCTGA...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGCTGGGGTTGGCCCTGTaGCAGCCCACGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYELGLAL*QPTGGQ
Trigger: CTGGCCTCCCGTGGGCTGCCACAGGGCCAACCCCAG...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TGCCCGCTCTCCACGTCCCACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGTCCTTCTGGTCTTCATaGCAAACTGCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: CPLSTSHRAHVPSPLAVRSFWSS*QTAPGP
Trigger: AGGCCCTGGGGCAGTTTGTCATGAAGACCAGAAGGA...CCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGGACGTGGAGAGCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR GCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCTGCAGCTCCACATCGTaGAGCTTGGCTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSCSSTS*SLARSS
Trigger: GGAGGAGCGAGCCAAGCTGCACGATGTGGAGCTGCA...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CGTCCCACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGCCCACAGGGCACATGTaGCATCGCCGCTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RPTGHMCHRRSLSGSACQPTGHM*HRRSLS
Trigger: TGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGG...CTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR GCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGGAGAAGAGGGACGGCTaGCAGGGCCCCACCGGTGAG +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEEKRDG*QGPTGE
Trigger: CTCACCGGTGGGGCCCTGGCAGCCGTCCCTCTTCTC...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp CCCGCTCTCCACGTCCCACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATTGTTCCCGTGGCCTTTaGGGGTCCTTCTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PALHVPQGTCAIAARCQDCSRGL*GSFWSS
Trigger: TGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACA...ATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGGACGTGGAGAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR GCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCCCTGTCTTATGGCTGTaGCCAGCTCCAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPPVLWL*PAPALE
Trigger: TTCCAGAGCTGGAGCTGGGCACAGCCATAAGACAGG...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGGCGGGAAGAGGGCAGTaGCAACGGGATGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEAGRGQ*QRDAHL
Trigger: GAGGTGGGCATCCCGTTGCCACTGCCCTCTTCCCGC...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAAGCGGAGAGCGGGAATaGGCTGAGCCGCGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAISGERE*AEPRRA
Trigger: CGCCCGCCGCGGCTCAGCGCATTCCCGCTCTCCGCT...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358784.11
CDS-3UTR CCA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGAGGACTTTGTTCCCGTaGCCTTTGAGGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQRTLFP*PLRVLL
Trigger: CAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCT...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGAGGCTTTCCCTAGGGTaGCTCTCCTCAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQRLSLG*LSSIIL
Trigger: CAGGATGATTGAGGAGAGCCACCCTAGGGAAAGCCT...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp ACACGGATAGGCCTTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTTGCAGGGACCTCCAGCTTGCCCTTaGGGCTCTCGGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TRIGLLGVSIRRGNCLQGPPACP*GSRPRS
Trigger: AGAGCGAGGCCGAGAGCCTCAAGGGCAAGCTGGAGG...TCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAAGGCCTATCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR TCA 90 bp CCCACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTGCATGTCAGAGTTGGTaGAGCTGCAGGCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: PTGHMCHRRSLSGSACQSACQSW*SCRPTG
Trigger: ACCTGTCGGCCTGCAGCTTCACCAACTCTGACATGC...ACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR TCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGCCACCGGTGAGAGGCTaGCCGCGCATTCTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEPPVRG*PRILKH
Trigger: GTGCTTTAGAATGCGCGGTCAGCCTCTCACCGGTGG...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGAGCGGGAATGCGCTaGGCCGCGGCGGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIRAGMR*AAAGAA
Trigger: AGCGGCGCCCGCCGCGGCTCAGCGCATTCCCGCTCT...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358784.11
CDS-3UTR GCA 90 bp CAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGGTGTCTTCATGACAAACTaGCCCAGGGCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: QGTCAIAARCQDLHVRVGVFMTN*PRASTR
Trigger: GCGGGTGGAGGCCCTGGGGCAGTTTGTCATGAAGAC...ACCAACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR GCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGCCTAGCCCTTCCGACTaGCTCTCTGGGACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEPSPSD*LSGTSS
Trigger: GGAGGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGG...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCAGGACTTTGTTCCCGTaGCCTTTGAGGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSRTLFP*PLRVLL
Trigger: CAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCT...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCAGCCCCTGCCCAGACTaGAATCTACTGGGACTAAAA +
Preference number: 4 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPSPCPD*NLLGLK
Trigger: TTTTAGTCCCAGTAGATTCCAGTCTGGGCAGGGGCT...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp CACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGCACCTTCCCATCCTGTaGCGAGCTCACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: HRAHVPSPLAVRICMSELHLPIL*RAHDPP
Trigger: AGGAGGATCGTGAGCTCGTCACAGGATGGGAAGGTG...CAACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR TCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGAGGCCTCACCAGGAATaGCACCTGGTGTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYERPHQE*HLVSEV
Trigger: CACCTCAGACACCAGGTGTCATTCCTGGTGAGGCCT...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCCCAGGCGTCCTCTTTTaGAAGGATTTTCAGGTCACA +
Preference number: 4 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPPGVLF*KDFQVT
Trigger: TGTGACCTGAAAATCCTTTCAAAAGAGGACGCCTGG...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCCTTTGCACCAGTCCATaGACAGGACTTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSLCTSP*TGLCSR
Trigger: ACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAG...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTCCCACAGGGCACATGTaGCATCGCCGCTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSPTGHM*HRRSLS
Trigger: TGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGG...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR GCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTCTACCCCACCCACTGTaGCTTCCCCAGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSLPHPL*LPQASR
Trigger: CCTGGAAGCCTGGGGAAGGCACAGTGGGTGGGGTAG...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTGCCCAGTCCCACTAGCGTCTCGTTCTCGTaGAGCCCCTCGGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: QTCKGIRLHHRVALPSPTSVSFS*SPSVAI
Trigger: GATGGCAACCGAGGGGCTGCACGAGAACGAGACGCT...AGTGGGACTGGGCAGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTAGCCTCCCGAGCAGCTaGGACTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSSLPSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAGTCCCAGCTGCTCGGGAGGCT...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCCACCTTCCCATCCTGTaGCGAGCTCACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSHLPIL*RAHDPP
Trigger: AGGAGGATCGTGAGCTCGTCACAGGATGGGAAGGTG...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAGTGGTCTCGAACTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAIVVSNS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGTTCGAGACCAC...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGACCAGGGCCCCACCGGTaGGAGGCTGACCGCGCATTC +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRPGPHR*EADRAF
Trigger: GAATGCGCGGTCAGCCTCTCACCGGTGGGGCCCTGG...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCGGAATGGGGGAAGATTaGGAAGGGTTAGAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPGMGED*EGLEKG
Trigger: TCCTTTTTCTAACCCTTCTCAATCTTCCCCCATTCC...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CGTAGAGTGCTAACGCGGTTTTCATGTCCAAACAGGATGGAGACCCGGGACCCTTGTGTTTCAAAGGCCTaGACGCACTGGCCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: RRVLTRFSCPNRMETRDPCVSKA*THWPER
Trigger: GCGCTCCGGCCAGTGCGTGCAGGCCTTTGAAACACA...AGGGTCCCGGGTCTCCATCCTGTTTGGACATGAAAACCGCGTTAGCACTCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR GCA 90 bp GCTTTGCCCATTTCCATGTTGGTATTGGCAGCCCCTATGGTGGCTCTAATTGTCGTGCAGCCCCTCGGTTaGCATCTTCGCGCGGGGACG +
Preference number: 4 (lower is better)
Translates to: ALPISMLVLAAPMVALIVVQPLG*HLRAGT
Trigger: CGTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCAC...GACAATTAGAGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAACCCGCTCCGCCACCTaGTGCAGCTCCACATCGTGC +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAITRSAT*CSSTSC
Trigger: GCACGATGTGGAGCTGCACCAGGTGGCGGAGCGGGT...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp TCGGGGGAAACTCGTAGAGTGCTAACGCGGTTTTCATGTCCAAACAGGATGGAGAAGGCCTGCACGCACTaGCCGGAGCGCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SGETRRVLTRFSCPNRMEKACTH*PERMSH
Trigger: GTGGGACATGCGCTCCGGCCAGTGCGTGCAGGCCTT...CTCCATCCTGTTTGGACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR CCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGCCGGCTCAGATTTCCTaGCCCACCTCAGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQPAQIS*PTSGPP
Trigger: GGGCGGGCCTGAGGTGGGCCAGGAAATCTGAGCCGG...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCGGCCAGAGTCCCCTGTaGAGACTGACCAACCCTGAA +
Preference number: 4 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSGQSPL*RLTNPE
Trigger: TTCAGGGTTGGTCAGTCTCCACAGGGGACTCTGGCC...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCGGCTGCCAATTACCGTaGAAAACACACAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSGCQLP*KTHRLE
Trigger: TTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCC...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGCCTCCAGCTTGCCCTTaGGGCTCTCGGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQPPACP*GSRPRS
Trigger: AGAGCGAGGCCGAGAGCCTCAAGGGCAAGCTGGAGG...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp GTTTTCATGTCCAAACAGGATGGAGACCCGGGACCCTTTGAGAACATCCCAGACACAGCAGGCGACCACTaGGGGAGAAGTCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: VFMSKQDGDPGPFENIPDTAGDH*GRSPRW
Trigger: CCAGCGTGGACTTCTCCCTCAGTGGTCGCCTGCTGT...GTCTGGGATGTTCTCAAAGGGTCCCGGGTCTCCATCCTGTTTGGACATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR TCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTGCCCCCGAGGGTCCCTaGGACCCTTTCAGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFAPEGP*DPFRGS
Trigger: GGACCCCCTGAAAGGGTCTCAGGGACCCTCGGGGGC...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACACTCAGGGCAGGGCCCTaGAGGCGCAGTGCAGGAACC +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTLRAGP*RRSAGT
Trigger: GGTTCCTGCACTGCGCCTTCAGGGCCCTGCCCTGAG...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp CGTCCCACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGACCACTTGTTTGTGGTaGAGGAATCCCACACGATCA +
Preference number: 4 (lower is better)
Translates to: RPTGHMCHRRSLSGSACQTTCLW*RNPTRS
Trigger: TGATCGTGTGGGATTCCTTCACCACAAACAAGTGGT...CTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR TCA 90 bp GCCTCATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGGCTATGGAGTCTGGCTGCAATGGGCTGGCTaGGCTGTTCAAACACGGATA +
Preference number: 4 (lower is better)
Translates to: ASSSPPSTCSFPQGYGVWLQWAG*AVQTRI
Trigger: TATCCGTGTTTGAACAGCTCAGCCAGCCCATTGCAG...CCAGACTCCATAGCCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp TCGGGGGAAACTCGTAGAGTGCTAACGCGGTTTTCATGTCCAAACAGGATGGAGCCCACAGGGCACATGTaGCATCGCCGCTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SGETRRVLTRFSCPNRMEPTGHM*HRRSLS
Trigger: TGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGG...CTCCATCCTGTTTGGACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR GCA 90 bp AACGCGGTTTTCATGTCCAAACAGGATGGAGACCCGGGACCCTTTGAGAACATCTGTCCGTGGAAGCTCTaGAGCAGCTGCCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NAVFMSKQDGDPGPFENICPWKL*SSCPLS
Trigger: GGAGAGCGGGCAGCTGCTGCAGAGCTTCCACGGACA...GATGTTCTCAAAGGGTCCCGGGTCTCCATCCTGTTTGGACATGAAAACCGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR GCA 90 bp GTCCCATCGGGGGAAACTCGTAGAGTGCTAACGCGGTTTTCATGTCCAAACAGGGGCAACCTCCCTATCTaGCCGCAGGTCATAGAGGCG +
Preference number: 4 (lower is better)
Translates to: VPSGETRRVLTRFSCPNRGNLPI*PQVIEA
Trigger: CGCCTCTATGACCTGCGGGCAGATAGGGAGGTTGCC...CCTGTTTGGACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGATGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR GCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGGTGCAGCCAGAACCTaGCGGCAGACCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRGAART*RQTPGH
Trigger: GTGGCCTGGGGTCTGCCGGCAGGTTCTGGCTGCACC...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR GCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGTGCAGCCCCTCGGTTaGCATCTTCGCGCGGGGACG +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISVQPLG*HLRAGT
Trigger: CGTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCAC...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358784.11
CDS-3UTR CCA 90 bp GTTTTCCATGCTTTGCCCATTTCCATGTTGGTATTGGCAGCCCCTATGGTGGCTACCCGCTCCGCCACCTaGTGCAGCTCCACATCGTGC +
Preference number: 4 (lower is better)
Translates to: VFHALPISMLVLAAPMVATRSAT*CSSTSC
Trigger: GCACGATGTGGAGCTGCACCAGGTGGCGGAGCGGGT...AGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp CAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGGTAGGACTTTGTTCCCGTaGCCTTTGAGGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QGTCAIAARCQDLHVRVGRTLFP*PLRVLL
Trigger: CAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCT...ACCAACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR CCA 90 bp GCCTCATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGGCTATGGAGTCTGGCAGGGCTATGGAGTCTaGTCAAAGAGAGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ASSSPPSTCSFPQGYGVWQGYGV*SKRGER
Trigger: TCTCTCCCCTCTCTTTGACCAGACTCCATAGCCCTG...CCAGACTCCATAGCCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR TCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCACCTCCAGCTTGCCCTTaGGGCTCTCGGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESPPACP*GSRPRS
Trigger: AGAGCGAGGCCGAGAGCCTCAAGGGCAAGCTGGAGG...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCCTACTGGTGACAGAATaGGTTGAGGCTACTATAATT +
Preference number: 4 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPLLVTE*VEATII
Trigger: AATTATAGTAGCCTCAACTCATTCTGTCACCAGTAG...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCGCCCATCACGATACCTaGACAAGCAGTTGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSAHHDT*TSSCEG
Trigger: ACCCTCACAACTGCTTGTTCAGGTATCGTGATGGGC...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGGTCTTTGCACCAGTCCATaGACAGGACTTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: QGTCAIAARCQDLHVRVGLCTSP*TGLCSR
Trigger: ACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAG...ACCAACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR GCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGAAGCTCTGCAGCAGCTaGCCGCTCTCCACGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQKLCSS*PLSTSH
Trigger: GTGGGACGTGGAGAGCGGGCAGCTGCTGCAGAGCTT...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAGGCAACCTCCCTATCTaGCCGCAGGTCATAGAGGCG +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAIGNLPI*PQVIEA
Trigger: CGCCTCTATGACCTGCGGGCAGATAGGGAGGTTGCC...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCCATTTCCTGAGCCCCTaGCCAGACTGGAATCTACTG +
Preference number: 4 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSHFLSP*PDWNLL
Trigger: CAGTAGATTCCAGTCTGGGCAGGGGCTCAGGAAATG...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGAGGCCCAGGAGGGGGCTaGCCAAGGCTCTACACCCCT +
Preference number: 4 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGGPGGG*PRLYTP
Trigger: AGGGGTGTAGAGCCTTGGGCAGCCCCCTCCTGGGCC...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGTTACCTCCTGGAATATaGACACAGTTTACTACAGCA +
Preference number: 4 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQLPPGI*TQFTTA
Trigger: TGCTGTAGTAAACTGTGTGCATATTCCAGGAGGTAA...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTCATCTGCCTAGCAACTaGCTGTCCAACCTCGGACTG +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSHLPSN*LSNLGL
Trigger: CAGTCCGAGGTTGGACAGGCAGTTGCTAGGCAGATG...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAACCCGCTCCGCCACCTaGTGCAGCTCCACATCGTGC +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISTRSAT*CSSTSC
Trigger: GCACGATGTGGAGCTGCACCAGGTGGCGGAGCGGGT...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATATCAGCCCCATGTCCGTaGAAGCTCTGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAISAPCP*KLCSSC
Trigger: GCAGCTGCTGCAGAGCTTCCACGGACATGGGGCTGA...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAAAGGCCTGCACGCACTaGCCGGAGCGCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRKACTH*PERMSH
Trigger: GTGGGACATGCGCTCCGGCCAGTGCGTGCAGGCCTT...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTGTGACCTGTGAGCCATaGGTTGCTCCCCTAAGCTAC +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSVTCEP*VAPLSY
Trigger: GTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCAC...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAGCCTCTCCGAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESASPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTCGGAGAGGC...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTTCCAGTCCTGTCTTATaGCTGTGCCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSSSPVL*LCPAPA
Trigger: AGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGA...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATACAGCTCTTCCAGGCTTaGGAATGGCCTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAIQLFQA*EWPGPQ
Trigger: CTGAGGCCCAGGCCATTCCCAAGCCTGGAAGAGCTG...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGTTTCATTTCTTTCACTaGGGTTGGCCCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEFHFFH*GWPCGS
Trigger: GCTGCCACAGGGCCAACCCCAGTGAAAGAAATGAAA...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp CTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTCGCAGATGGTGAGAGGTaGGGACCAGCGCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LQNTIYPMELTPESPHAVADGER*GPARSL
Trigger: CAAGCTGCGCGCTGGTCCTCACCTCTCACCATCTGC...GACAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCTGGATGCTCCAAATATaGTGCTTTCTTTGGAATAGA +
Preference number: 4 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPWMLQI*CFLWNR
Trigger: TCTATTCCAAAGAAAGCATCATATTTGGAGCATCCA...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCGAGGGTATGATCCCATaGTCCAGAGCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSEGMIP*SRAESS
Trigger: ACTGCTTTCTGCTCTGGATCATGGGATCATACCCTC...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGCTGGCCTGGCAACTATaGGAGCCCGGGACACAAAGG +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQLAWQL*EPGTQR
Trigger: CCTTTGTGTCCCGGGCTCTCATAGTTGCCAGGCCAG...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp GTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTTGCCAAGCTCTTCCAAGGCCTCTCCGGTCACGGATaGGAGGGCAAGTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: VALLNHPVTSFFAKLFQGLSGHG*EGKWFS
Trigger: GCTAAACCACTTGCCCTCTCATCCGTGACCGGAGAG...GCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAGAGCTGGGGAGGCCATaGAGAGGGGATTCTCATGCT +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAIELGRP*RGDSHA
Trigger: AGCATGAGAATCCCCTCTTCATGGCCTCCCCAGCTC...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGGTTCCTCCTCTTATCTTTaGACCAGTCCATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: QGTCAIAARCQDLHVRVGSSSYL*TSPCTG
Trigger: TCCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGA...ACCAACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR GCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACACCCACAGGGCACATGTaGCATCGCCGCTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTPTGHM*HRRSLS
Trigger: TGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGG...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAAGCTCTGCAGCAGCTaGCCGCTCTCCACGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIKLCSS*PLSTSH
Trigger: GTGGGACGTGGAGAGCGGGCAGCTGCTGCAGAGCTT...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp GGAGACCCGGGACCCTTTGAGAACATCCCAGACGTTGATAGTGTAATCATTGTAAAGCTCTGCAGCAGCTaGCCGCTCTCCACGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GDPGPFENIPDVDSVIIVKLCSS*PLSTSH
Trigger: GTGGGACGTGGAGAGCGGGCAGCTGCTGCAGAGCTT...TACAATGATTACACTATCAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR GCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGATGTCCGTGGAAGCTCTaGAGCAGCTGCCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRCPWKL*SSCPLS
Trigger: GGAGAGCGGGCAGCTGCTGCAGAGCTTCCACGGACA...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGACACGCAGCCTTCAGGTaGAGCCAGAACCTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRHAAFR*SQNLPA
Trigger: TGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTG...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR GCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTATGGAACCTGGAATGTaGTTCCCTGGGCCACCTTTC +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSMEPGM*FPGPPF
Trigger: GAAAGGTGGCCCAGGGAAGCACATTCCAGGTTCCAT...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGCCCTGAAGGCGCAGTaGAGGAACCTGCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRALKAQ*RNLPWV
Trigger: CACCCATGGCAGGTTCCTGCACTGCGCCTTCAGGGC...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCAGACTTCTTGAAAACTaGTCTCAGAGCTCGTTGTTT +
Preference number: 4 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSRLLEN*SQSSLF
Trigger: AAACAACGAGCTCTGAGACCAGTTTTCAAGAAGTCT...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGAACCCGCTCCGCCACCTaGTGCAGCTCCACATCGTGC +
Preference number: 4 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGTRSAT*CSSTSC
Trigger: GCACGATGTGGAGCTGCACCAGGTGGCGGAGCGGGT...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTAACCACCACAAGCAATaGCACATCCCGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSNHHKQ*HIPMGH
Trigger: ATGCCCCATCGGGATGTGCCATTGCTTGTGGTGGTT...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGAAGGCCTGCACGCACTaGCCGGAGCGCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLKACTH*PERMSH
Trigger: GTGGGACATGCGCTCCGGCCAGTGCGTGCAGGCCTT...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAGGCCTGCACGCACTaGCCGGAGCGCATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFKACTH*PERMSH
Trigger: GTGGGACATGCGCTCCGGCCAGTGCGTGCAGGCCTT...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCAGTGGAAGCATTCTCTaGAATACTTTCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSSGSIL*NTFPGP
Trigger: GGGCCCAGGGAAAGTATTCCAGAGAATGCTTCCACT...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTCACCTCTGGCTCGCCTaGGAGAAGAGGGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFHLWLA*EKRDGC
Trigger: GCAGCCGTCCCTCTTCTCCCAGGCGAGCCAGAGGTG...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTCGCGGCCTCCCCAGTaGGCCTCCGGCTCAGATTTC +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFSRPPQ*ASGSDF
Trigger: GAAATCTGAGCCGGAGGCCCACTGGGGAGGCCGCGA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp GTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTTGCCAAGCTCTTCCAAGGCTGTTCCCGTGGCCTTTaGGGGTCCTTCTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VALLNHPVTSFFAKLFQGCSRGL*GSFWSS
Trigger: TGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACA...GCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTGCTCCTTGTTTGTGGTaGAGGAATCCCACACGATCA +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSAPCLW*RNPTRS
Trigger: TGATCGTGTGGGATTCCTTCACCACAAACAAGGAGC...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAACGTGCAGGGCATGGTaGCCGCGTGCTCCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRTCRAW*PRAPCL
Trigger: CAAACAAGGAGCACGCGGTCACCATGCCCTGCACGT...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR TCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTACAGCAGGCGACCACTaGGGGAGAAGTCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFTAGDH*GRSPRW
Trigger: CCAGCGTGGACTTCTCCCTCAGTGGTCGCCTGCTGT...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp CGTAGAGTGCTAACGCGGTTTTCATGTCCAAACAGGATGGAGACCCGGGACCCTGAGGGTATGATCCCATaGTCCAGAGCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RRVLTRFSCPNRMETRDPEGMIP*SRAESS
Trigger: ACTGCTTTCTGCTCTGGATCATGGGATCATACCCTC...AGGGTCCCGGGTCTCCATCCTGTTTGGACATGAAAACCGCGTTAGCACTCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR TCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACACTGGAAGAGTCTCTCTaGGGAGCAGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTLEESL*GAGPGA
Trigger: AGCTCCAGGCCCTGCTCCTCAGAGAGACTCTTCCAG...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACACTGAACAAGCAGTTGTaGGGGTGGGCCTGGCACACC +
Preference number: 4 (lower is better)
Translates to: NFPWGGCQLPWKTHRLETLNKQL*GWAWHT
Trigger: GGTGTGCCAGGCCCACCCTCACAACTGCTTGTTCAG...TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTAGTTCGAGACCAGTGTaGCCAACATGGAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSSSRPV*PTWRNL
Trigger: CAGGTTTCTCCATGTTGGTCACACTGGTCTCGAACT...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGGGCAAGTTTGGGAAATaGAGATCTACAAATCCCCAC +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEGKFGK*RSTNPH
Trigger: GTGGGGATTTGTAGATCTTCATTTCCCAAACTTGCC...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGATGCAGCTCCACATCGTaGAGCTTGGCTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRCSSTS*SLARSS
Trigger: GGAGGAGCGAGCCAAGCTGCACGATGTGGAGCTGCA...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCGTCTTCATGACAAACTaGCCCAGGGCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIVFMTN*PRASTR
Trigger: GCGGGTGGAGGCCCTGGGGCAGTTTGTCATGAAGAC...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGTCTTCATGACAAACTaGCCCAGGGCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRVFMTN*PRASTR
Trigger: GCGGGTGGAGGCCCTGGGGCAGTTTGTCATGAAGAC...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGACCCACAGGGCACATGTaGCATCGCCGCTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRPTGHM*HRRSLS
Trigger: TGACAGCGAGCGGCGATGGCACATGTGCCCTGTGGG...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGATGTCCGTGGAAGCTCTaGAGCAGCTGCCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRCPWKL*SSCPLS
Trigger: GGAGAGCGGGCAGCTGCTGCAGAGCTTCCACGGACA...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGATGTGTTTCAAAGGCCTaGACGCACTGGCCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRCVSKA*THWPER
Trigger: GCGCTCCGGCCAGTGCGTGCAGGCCTTTGAAACACA...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGGCAACCTCCCTATCTaGCCGCAGGTCATAGAGGCG +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRGNLPI*PQVIEA
Trigger: CGCCTCTATGACCTGCGGGCAGATAGGGAGGTTGCC...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAGTCCAGGGGACAAGGTaGACGCAGCCTTCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRVQGTR*TQPSGA
Trigger: TGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR GCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAAGAGAGGGTTGGGGATaGCACCACAAGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESREGWG*HHKEAS
Trigger: GCTGGCCTCCTTGTGGTGGCATCCCCAACCCTCTCT...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGGTGACTATGCTCACTTaGCCCATTATCAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEVTMLT*PIISQN
Trigger: GTTTTGGCTGATAATGGGGCAAGTGAGCATAGTCAC...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp ACACGGATAGGCCTTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTTGCAGGGAAAGTTGAGCTGTGCATaGCCAAGCCAGACTTGCAAG +
Preference number: 4 (lower is better)
Translates to: TRIGLLGVSIRRGNCLQGKLSCA*PSQTCK
Trigger: CTTGCAAGTCTGGCTTGGGCATGCACAGCTCAACTT...TCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAAGGCCTATCCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCTCAGCCCCATGTCCGTaGAAGCTCTGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNISAPCP*KLCSSC
Trigger: GCAGCTGCTGCAGAGCTTCCACGGACATGGGGCTGA...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp GATGGAGACCCGGGACCCTTTGAGAACATCCCAGACGTTGATAGTGTAATCATTTCAGCCCCATGTCCGTaGAAGCTCTGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DGDPGPFENIPDVDSVIISAPCP*KLCSSC
Trigger: GCAGCTGCTGCAGAGCTTCCACGGACATGGGGCTGA...AATGATTACACTATCAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR CCA 90 bp GTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTTGCCAAGCTCTTCCAAGGCTCCAGTCCTGTCTTATaGCTGTGCCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VALLNHPVTSFFAKLFQGSSPVL*LCPAPA
Trigger: AGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGA...GCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAGGCCTGGCACACCCCTaGATGTTTACAGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAIGLAHP*MFTGAS
Trigger: AGATGCTCCTGTAAACATCCAGGGGTGTGCCAGGCC...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAGCCTTCCTGCACTTCTaGGAGCCGGAAGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESAFLHF*EPEGTV
Trigger: CACTGTGCCTTCCGGCTCCCAGAAGTGCAGGAAGGC...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACAAAGGCTCTACACCCCTaGGGGCCCATCTGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: NFPWGGCQLPWKTHRLETKALHP*GPICLA
Trigger: GGCCAAACAGATGGGCCCCCAGGGGTGTAGAGCCTT...TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTTGCCAAGCTCTTCCAAGGCGCCCTTAGTGGTTTCTaGGAGGTCTCACACAGAGGG +
Preference number: 4 (lower is better)
Translates to: VALLNHPVTSFFAKLFQGALSGF*EVSHRG
Trigger: CCCTCTGTGTGAGACCTCCCAGAAACCACTAAGGGC...GCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GTTTTCCATGCTTTGCCCATTTCCATGTTGGTATTGGCAGCCCCTATGGTGGCTACAGGGCCGGGCAGCTaGACCAGAGCACCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: VFHALPISMLVLAAPMVATGPGS*TRAPLS
Trigger: ACTTAAAGGTGCTCTGGTCCAGCTGCCCGGCCCTGT...AGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp TGCATGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTAATGCTGCAATGGGCTaGCTGAGCTGTTCAAACACG +
Preference number: 4 (lower is better)
Translates to: CMPKPDLQGDQTASQGSSNAAMG*LSCSNT
Trigger: CGTGTTTGAACAGCTCAGCCAGCCCATTGCAGCATT...AGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR CAA 72 bp GGGTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTaGCCAAGCTCTTCCAAGGCCCTTAGTGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GWLSSIILSPLS*PSSSKALSGFW
Trigger: CCAGAAACCACTAAGGGCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATACCTCCAGCTTGCCCTTaGGGCTCTCGGCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIPPACP*GSRPRS
Trigger: AGAGCGAGGCCGAGAGCCTCAAGGGCAAGCTGGAGG...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGTCCTTCTGGTCTTCATaGCAAACTGCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQSFWSS*QTAPGP
Trigger: AGGCCCTGGGGCAGTTTGTCATGAAGACCAGAAGGA...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTCCATGCTTTGCCCATTTCCATGTTGGTATTGGCAGCCCCTATGGTGGCTCTTCCTTCTGGTCTTCATaGCAAACTGCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FPCFAHFHVGIGSPYGGSSFWSS*QTAPGP
Trigger: AGGCCCTGGGGCAGTTTGTCATGAAGACCAGAAGGA...AGAGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR TCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGACACCTTCCCATCCTGTaGCGAGCTCACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRHLPIL*RAHDPP
Trigger: AGGAGGATCGTGAGCTCGTCACAGGATGGGAAGGTG...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp GATGGAGACCCGGGACCCTTTGAGAACATCCCAGACGTTGATAGTGTAATCATTGCATGTCAGAGTTGGTaGAGCTGCAGGCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: DGDPGPFENIPDVDSVIIACQSW*SCRPTG
Trigger: ACCTGTCGGCCTGCAGCTTCACCAACTCTGACATGC...AATGATTACACTATCAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR TCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAACGCTTAGTGACCTGTaGGCCATGGGTTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESTLSDL*AMGCSP
Trigger: AGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGT...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR GCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAAGCGTCTCGTTCTCGTaGAGCCCCTCGGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRSVSFS*SPSVAI
Trigger: TATGGCAACCGAGGGGCTGCACGAGAACGAGACGCT...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGTCTTCATGACAAACTaGCCCAGGGCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRVFMTN*PRASTR
Trigger: GCGGGTGGAGGCCCTGGGGCAGTTTGTCATGAAGAC...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCTGGGGCATAAGCACATaGCATCACCCACGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIWGIST*HHPRAG
Trigger: CCCTGCACGTGGGTGATGGCATGTGCTTATGCCCCA...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR GCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGATGGGGCATAAGCACATaGCATCACCCACGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRWGIST*HHPRAG
Trigger: CCCTGCACGTGGGTGATGGCATGTGCTTATGCCCCA...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR GCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGAAGCTCTGCAGCAGCTaGCCGCTCTCCACGTCCCAC +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVKLCSS*PLSTSH
Trigger: GTGGGACGTGGAGAGCGGGCAGCTGCTGCAGAGCTT...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGATCAGGAATCCCATGGTaGCCTGACCCCTTCAGCACC +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRSGIPW*PDPFST
Trigger: GGTGCTGAAGGGGTCAGGGCACCATGGGATTCCTGA...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAGCAGTGGCAACGGGATaGCCACCTCTGGCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIAVATG*PPLARL
Trigger: CAGGCGAGCCAGAGGTGGGCATCCCGTTGCCACTGC...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGAGCCGGGCGTGGTGGTaGATGCCTTGTAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLSRAWW*MPCNPS
Trigger: GCTGGGATTACAAGGCATGCACCACCACGCCCGGCT...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTTCATGCCATTCTCCTaGCCCAGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFFMPFS*PSLPSS
Trigger: GCTGCTCGGGAGGCTGGGGCAGGAGAATGGCATGAA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCTACCTCCTGGGTTCATaGCATTCTCCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIYLLGS*HSPAPA
Trigger: GGCTGGGGCAGGAGAATGGCATGAACCCAGGAGGTA...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp GGTCACAGGCCTCAGCTGGTCCCTAGCCCTTCCGACTGCCTCTCTGGGACTTCCCTATTCACAGAATTGTaGAATCACCACCATCTAATT +
Preference number: 4 (lower is better)
Translates to: GHRPQLVPSPSDCLSGTSLFTEL*NHHHLI
Trigger: AATTAGATGGTGGTGATTGCACAATTCTGTGAATAG...GGAAGTCCCAGAGAGGCAGTCGGAAGGGCTAGGGACCAGCTGAGGCCTGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGGCTATGGAGTCTGGTCAAGTAGAGGCAACTGCTTaGAGGGATACATGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: HLPHPPRVHSHRAMESGQVEATA*RDTWRE
Trigger: TTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTAC...TTGACCAGACTCCATAGCCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp TTGGGGCGAGAGGGGAATAAATGCTGCAATGGGCTGGCTGAGCTGTTCAAACACATCCGTAGAGGCAACTaGTTGCAGGGATACATGGAG +
Preference number: 4 (lower is better)
Translates to: LGREGNKCCNGLAELFKHIRRGN*LQGYME
Trigger: CTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGAT...GTGTTTGAACAGCTCAGCCAGCCCATTGCAGCATTTATTCCCCTCTCGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp GCCTCATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGGCTATGGAGTCTGGAGTTGCACATGTGGTTaGAAGTTTTCCATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ASSSPPSTCSFPQGYGVWSCTCG*KFSMLC
Trigger: GCAAAGCATGGAAAACTTGCAACCACATGTGCAACT...CCAGACTCCATAGCCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGTGACCTGTGAGCCATaGGTTGCTCCCCTAAGCTAC +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQVTCEP*VAPLSY
Trigger: GTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCAC...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACAGCCCAGCTCCAGCTCTaGAAGAGTCTCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTAQLQL*KSLSEE
Trigger: CTCCTCAGAGAGACTCTTCCAGAGCTGGAGCTGGGC...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCCTGGAATACTTTCCCTaGGCCCTTAAAGTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSLEYFP*ALKVAF
Trigger: AAAAGCCACTTTAAGGGCCCAGGGAAAGTATTCCAG...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAGAGTCCCAGTATCGGTaGTGCCACCTTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESESQYR*CHLSAS
Trigger: GCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTTCCGACTGCCTCTCTaGGACTTCCTCCACCGACCG +
Preference number: 4 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLFRLPL*DFLHRP
Trigger: CGGTCGGTGGAGGAAGTCCCAGAGAGGCAGTCGGAA...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCGTGACCTCTGCTTCATaGTTCCTGGTTTCTGACAAA +
Preference number: 4 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSVTSAS*FLVSDK
Trigger: TTTGTCAGAAACCAGGAACCATGAAGCAGAGGTCAC...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCTCCTTCTGGTCTTCATaGCAAACTGCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNISFWSS*QTAPGP
Trigger: AGGCCCTGGGGCAGTTTGTCATGAAGACCAGAAGGA...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATGTTCCCGTGGCCTTTaGGGGTCCTTCTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTCSRGL*GSFWSS
Trigger: TGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACA...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGACACCTTCCCATCCTGTaGCGAGCTCACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRHLPIL*RAHDPP
Trigger: AGGAGGATCGTGAGCTCGTCACAGGATGGGAAGGTG...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGACGTGCAGGGCATGGTaGCCGCGTGCTCCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVTCRAW*PRAPCL
Trigger: CAAACAAGGAGCACGCGGTCACCATGCCCTGCACGT...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR TCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTGCATGTCAGAGTTGGTaGAGCTGCAGGCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFACQSW*SCRPTG
Trigger: ACCTGTCGGCCTGCAGCTTCACCAACTCTGACATGC...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR TCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAACAGCAGGCGACCACTaGGGGAGAAGTCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSITAGDH*GRSPRW
Trigger: CCAGCGTGGACTTCTCCCTCAGTGGTCGCCTGCTGT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGCAGACTCTGAGGGTATaGTCCCATGATCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQQTLRV*SHDPEQ
Trigger: CTGCTCTGGATCATGGGATCATACCCTCAGAGTCTG...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGCTGAACAAGCAGTTGTaGGGGTGGGCCTGGCACACC +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVLNKQL*GWAWHT
Trigger: GGTGTGCCAGGCCCACCCTCACAACTGCTTGTTCAG...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAAAAAGATGGCCTGGCTaGTTTTGGACCGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRKRWPG*FWTEWP
Trigger: GGGCCACTCGGTCCAAAATCAGCCAGGCCATCTTTT...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAAAAAGATGGCCTGGCTaGTTTTGGACCGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESKRWPG*FWTEWP
Trigger: GGGCCACTCGGTCCAAAATCAGCCAGGCCATCTTTT...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAACTGGGCCCATTTCCTaGGCCCCTGCCCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSITGPIS*APAQTG
Trigger: TCCAGTCTGGGCAGGGGCTCAGGAAATGGGCCCAGT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAGGAGTCCGGATGAATaGGGAGAGGGGGAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIRSPDE*GEGEGA
Trigger: TGCCCCCTCCCCCTCTCCTCATTCATCCGGACTCCT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAAAAAAGGAGTCCGGATaGATGAGGAGAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISKKESG*MRRGGG
Trigger: CCCTCCCCCTCTCCTCATTCATCCGGACTCCTTTTT...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAACAGGTTGGAAACAGTaGCCTCTGCTTCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAITGWKQ*PLLHGS
Trigger: GGAACCATGAAGCAGAGGTCACTGTTTCCAACCTGT...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAATCCTCTGGCAACGGTaGCTATGCTCACTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISILWQR*LCSLAP
Trigger: TGGGGCAAGTGAGCATAGTCACCGTTGCCAGAGGAT...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGTGCAGCTCCACATCGTaGAGCTTGGCTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVCSSTS*SLARSS
Trigger: GGAGGAGCGAGCCAAGCTGCACGATGTGGAGCTGCA...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp ATGTTGGTATTGGCAGCCCCTATGGTGGCTCTAATTGTCCTCTTGGGGCGAGAGTCCTCCTCTTATCTTTaGACCAGTCCATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: MLVLAAPMVALIVLLGRESSSYL*TSPCTG
Trigger: TCCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGA...CTCTCGCCCCAAGAGGACAATTAGAGCCACCATAGGGGCTGCCAATACCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATATGTCCGTGGAAGCTCTaGAGCAGCTGCCCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSICPWKL*SSCPLS
Trigger: GGAGAGCGGGCAGCTGCTGCAGAGCTTCCACGGACA...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCCCTGTCTTATGGCTGTaGCCAGCTCCAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIPVLWL*PAPALE
Trigger: TTCCAGAGCTGGAGCTGGGCACAGCCATAAGACAGG...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR GCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGAGGCTTCCTGCCCATaGGGGGAGTGGAAGCATTCT +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSREASCP*GEWKHS
Trigger: AGAATGCTTCCACTCCCCGCATGGGCAGGAAGCCTC...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGACACTGCGAGAGCGCATaGTCACAGCGAAGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGHCESA*SQRRRL
Trigger: AAGCCTCCTTCGCTGTGAGCATGCGCTCTCGCAGTG...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTCCCAGTATCGGTGGTaGCACCTTTCAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFSQYRW*HLSASW
Trigger: CCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCACTGGCTCCAGCCAAGTaGTGTCTAGAAGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESLAPAK*CLEAGV
Trigger: GACTCCTGCTTCTAGACAGCACTTGGCTGGAGCCAG...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp GCAGCCTCATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGGCTATGGAGTCGTTGCAAGTTTTCCATaGTTTGCCCATTTCCATGTT +
Preference number: 4 (lower is better)
Translates to: AASSSPPSTCSFPQGYGVVASFP*FAHFHV
Trigger: AACATGGAAATGGGCAAAGCATGGAAAACTTGCAAC...GACTCCATAGCCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATGAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAGGCCTGGCACACCCCTaGATGTTTACAGGAGCATCT +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRGLAHP*MFTGAS
Trigger: AGATGCTCCTGTAAACATCCAGGGGTGTGCCAGGCC...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGAGCTCAGGAATCCCATaGTGCCCTGACCCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLSSGIP*CPDPFS
Trigger: GCTGAAGGGGTCAGGGCACCATGGGATTCCTGAGCT...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGGGGCCCATCTGTTTaGCCCCTTCACCACAATTGG +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRGGPSV*PLHHNW
Trigger: CCAATTGTGGTGAAGGGGCCAAACAGATGGGCCCCC...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGACACCTTTCAGCCAGCTaGCCTGGCAACTATGAGAGC +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRHLSAS*PGNYES
Trigger: GCTCTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTG...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGGGCTGCCTATGGATaGGGAGGAGATGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRGAAYG*GGDGEK
Trigger: TTTCTCCCCATCTCCTCCCCATCCATAGGCAGCCCC...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAATTAGCCGGGCGTGGTaGTGCATGCCTTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRISRAW*CMPCNP
Trigger: GGGATTACAAGGCATGCACCACCACGCCCGGCTAAT...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAGGCTTGGGAATGGCCTaGGCCTCAGCCCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIGLGMA*ASAPVF
Trigger: GAAGACTGGGGCTGAGGCCCAGGCCATTCCCAAGCC...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAGGAACCTGCCATGGGTaGGACGATTCTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESGTCHG*DDSSQQ
Trigger: CTGCTGAGAAGAATCGTCCCACCCATGGCAGGTTCC...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGTTCTTTCACTGGGGTTaGCCCTGTGGCAGCCCACGG +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVFFHWG*PCGSPR
Trigger: CCGTGGGCTGCCACAGGGCCAACCCCAGTGAAAGAA...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp ACGTGTTCATTCCCACAGGGCTATGGAGTCTGGTCAAAGAGAGGGGAGAGAGAAGAAGCCTCTATAACGTaGCTGGGAACAATGCCTCAC +
Preference number: 4 (lower is better)
Translates to: TCSFPQGYGVWSKRGEREEASIT*LGTMPH
Trigger: GTGAGGCATTGTTCCCAGCCACGTTATAGAGGCTTC...TTCTCTCTCCCCTCTCTTTGACCAGACTCCATAGCCCTGTGGGAATGAACACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp GTTCAAACACGGATAGGCCTTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTTGTTTCCATGTTGGTATTaGCAGCCCCTATGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VQTRIGLLGVSIRRGNCLFPCWY*QPLWWL
Trigger: GAGCCACCATAGGGGCTGCCAATACCAACATGGAAA...CAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAAGGCCTATCCGTGTTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR TCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCACAGACTCTGAGGGTATaGTCCCATGATCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESQTLRV*SHDPEQ
Trigger: CTGCTCTGGATCATGGGATCATACCCTCAGAGTCTG...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGACGCTTAGTGACCTGTaGGCCATGGGTTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVTLSDL*AMGCSP
Trigger: AGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGT...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGATGACACCTGGTGTCTaGGGTGACCTTTTATTCCCC +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQMTPGV*GDLLFP
Trigger: GGGGAATAAAAGGTCACCTCAGACACCAGGTGTCAT...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAGAGGTGGGTGTGAATaGAGGCCAGCCCTCTTATGT +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRRGGCE*RPALLC
Trigger: ACATAAGAGGGCTGGCCTTCATTCACACCCACCTCT...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGGCCAAAACCAAAATGTaGCAATATTGGTCTTACCTA +
Preference number: 4 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEAKTKM*QYWSYL
Trigger: TAGGTAAGACCAATATTGTCACATTTTGGTTTTGGC...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp CTAACGCGGTTTTCATGTCCAAACAGGATGGAGACCCGGGACCCTTTGAGAACAGATACTTTTGGCAAATaGCTTCCTCTTGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LTRFSCPNRMETRDPLRTDTFGK*LPLAQP
Trigger: AGGCTGGGCAAGAGGAAGTCATTTGCCAAAAGTATC...TGTTCTCAAAGGGTCCCGGGTCTCCATCCTGTTTGGACATGAAAACCGCGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR GCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATATGTGTTTCAAAGGCCTaGACGCACTGGCCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSICVSKA*THWPER
Trigger: GCGCTCCGGCCAGTGCGTGCAGGCCTTTGAAACACA...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp GCAGTCCCATCGGGGGAAACTCGTAGAGTGCTAACGCGGTTTTCATGTCCAAACGAAGTCCACGCTGGATaGTCCAAATATGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: AVPSGETRRVLTRFSCPNEVHAG*SKYDAF
Trigger: GAAAGCATCATATTTGGAGCATCCAGCGTGGACTTC...GTTTGGACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGATGGGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR GCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAGTCCAGGGGACAAGGTaGACGCAGCCTTCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIVQGTR*TQPSGA
Trigger: TGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR GCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTTTCTCGTGCCTTCCTaGACTTCTGGGAGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFFLVPS*TSGSRK
Trigger: CTTCCGGCTCCCAGAAGTGCAGGAAGGCACGAGAAA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAGCGTCTCGTTCTCGTaGAGCCCCTCGGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSISVSFS*SPSVAI
Trigger: GATGGCAACCGAGGGGCTGCACGAGAACGAGACGCT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp AACGCGGTTTTCATGTCCAAACAGGATGGAGACCCGGGACCCTTTGAGAACATCCAAATGACTTCCTCTTaGCCAGCCTCAGTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: NAVFMSKQDGDPGPFENIQMTSS*PASVSS
Trigger: TGAGGAAACTGAGGCTGGGCAAGAGGAAGTCATTTG...GATGTTCTCAAAGGGTCCCGGGTCTCCATCCTGTTTGGACATGAAAACCGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR CCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAGGACTTTGTTCCCGTaGCCTTTGAGGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRRTLFP*PLRVLL
Trigger: CAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCT...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAAACCACCACAAGCAATaGCACATCCCGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISNHHKQ*HIPMGH
Trigger: ATGCCCCATCGGGATGTGCCATTGCTTGTGGTGGTT...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR CCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACACAAAGGCATCTCCACTaGGGTAGTACCGGACACTGT +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTQRHLH*GSTGHC
Trigger: ACAGTGTCCGGTACTACCCCAGTGGAGATGCCTTTG...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAGCCTCTCCGAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSASPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTCGGAGAGGC...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAGTTTACAGGAGCATCTaGTCCAGTCCTGTCTTATGG +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAIVYRSI*SSPVLW
Trigger: CCATAAGACAGGACTGGACCAGATGCTCCTGTAAAC...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCATGCCCATGCGGGGAGTaGAAGCATTCTCTGGAATAC +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESCPCGE*KHSLEY
Trigger: GTATTCCAGAGAATGCTTCCACTCCCCGCATGGGCA...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCATGCAGGAACCTGCCATaGGTGGGACGATTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISCRNLP*VGRFFS
Trigger: TGAGAAGAATCGTCCCACCCATGGCAGGTTCCTGCA...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTTGCAGGGATACATGGAGAGAAGCTTGCAGGGATACATaGAGAGAAATCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: FLGFPSVEATACRDTWREACRDT*REIRTG
Trigger: CCCTGTCCTGATTTCTCTCCATGTATCCCTGCAAGC...TTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp TGTGCATGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTATGCAGTTGCACATGTaGTTGCAAGTTTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: CACPSQTCKGIRLHHRVAMQLHM*LQVFHA
Trigger: AGCATGGAAAACTTGCAACCACATGTGCAACTGCAT...AGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR CAA 72 bp TGCCGCCAAACACTAGACTCCTATCTTGCTGCAAATTaGATTCCATTAACCAACTCCTCCCCACCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CRQTLDSYLAAN*IPLTNSSPPPA
Trigger: AGCAGGGGGTGGGGAGGAGTTGGTTAATGGAATCAAATTTGCAGCAAGATAGGAGTCTAGTGTTTGGCGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 72 bp AAAGGCATCTCCACTGGGGTAGTACCTGCGATACTTTaGGCAAATGACTTCCTCTTGCCCAGCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KGISTGVVPAIL*ANDFLLPSLSF
Trigger: GAAACTGAGGCTGGGCAAGAGGAAGTCATTTGCCAAAAGTATCGCAGGTACTACCCCAGTGGAGATGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR TCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGCTCCTTGTTTGTGGTaGAGGAATCCCACACGATCA +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISAPCLW*RNPTRS
Trigger: TGATCGTGTGGGATTCCTTCACCACAAACAAGGAGC...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR TCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAACAGCAGGCGACCACTaGGGGAGAAGTCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSTAGDH*GRSPRW
Trigger: CCAGCGTGGACTTCTCCCTCAGTGGTCGCCTGCTGT...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGACAGACTCTGAGGGTATaGTCCCATGATCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRQTLRV*SHDPEQ
Trigger: CTGCTCTGGATCATGGGATCATACCCTCAGAGTCTG...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAATTAGGCCCAGACTCTaGGGGTATGATCCCATGATC +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISIRPRL*GYDPMI
Trigger: GATCATGGGATCATACCCTCAGAGTCTGGGCCTAAT...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATGCACTGTCAGAAGATaGTTAGGCCCAGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTCTVRR*LGPDSE
Trigger: CTCAGAGTCTGGGCCTAATCATCTTCTGACAGTGCA...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATGTGGTCTCGAACTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNVVSNS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGTTCGAGACCAC...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAACCTGGTGTCTGAGGTaGCCTTTTATTCCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESTWCLR*PFIPLG
Trigger: ACCTAGGGGAATAAAAGGTCACCTCAGACACCAGGT...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACAACCTGGTGTCTGAGGTaGCCTTTTATTCCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTTWCLR*PFIPLG
Trigger: ACCTAGGGGAATAAAAGGTCACCTCAGACACCAGGT...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAATGACACCTGGTGTCTaGGGTGACCTTTTATTCCCC +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISMTPGV*GDLLFP
Trigger: GGGGAATAAAAGGTCACCTCAGACACCAGGTGTCAT...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAGGCCTCACCAGGAATaGCACCTGGTGTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIRPHQE*HLVSEV
Trigger: CACCTCAGACACCAGGTGTCATTCCTGGTGAGGCCT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATCCAGGAGGCGGAGGTTaGAGTGAGCCCGAGATCGCG +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNPGGGG*SEPEIA
Trigger: CGCGATCTCGGGCTCACTTCAACCTCCGCCTCCTGG...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAGTATGTCTGGAAGAGTaGCCCAATTCTCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESVCLEE*PNSLRS
Trigger: TGACCGGAGAGAATTGGGTCACTCTTCCAGACATAC...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TTGGGGCGAGAGGGGAATAAATGCTGCAATGGGCTGGCTGAGCTGTTCAAACACAATTTAAATCTAAGTTaGGCTGTGCATGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LGREGNKCCNGLAELFKHNLNLS*AVHAQA
Trigger: GGCTTGGGCATGCACAGCTCAACTTAGATTTAAATT...GTGTTTGAACAGCTCAGCCAGCCCATTGCAGCATTTATTCCCCTCTCGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp TTTTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTTGCACATGTGGTCTTCATGACAAACTaGCCCAGGGCCTCCACCCGC +
Preference number: 4 (lower is better)
Translates to: FWCLLSLRRQIVHAVAHVVFMTN*PRASTR
Trigger: GCGGGTGGAGGCCCTGGGGCAGTTTGTCATGAAGAC...CACATGTGCAACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACACTTTGCACCAGTCCATaGACAGGACTTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTLCTSP*TGLCSR
Trigger: ACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAG...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp GGTTGCAAGTTTTCCATGCTTTGCCCATTTCCATGTTGGTATTGGCAGCCCCTACTTTGCACCAGTCCATaGACAGGACTTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: GCKFSMLCPFPCWYWQPLLCTSP*TGLCSR
Trigger: ACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAG...TAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAACTTGCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATTCCCTTGGGGAGGCTaGCAATTACCGTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTFPWGG*QLPWKT
Trigger: TGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAA...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TGTGCATGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTAAGACAAATAGTACATaGAGTTGCACATGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: CACPSQTCKGIRLHHRVAKTNST*SCTCGC
Trigger: GCAACCACATGTGCAACTGCATGTACTATTTGTCTT...AGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAAATGGCACATCCCGATaGGGCATAAGCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISNGTSR*GISTCH
Trigger: ATGGCATGTGCTTATGCCCCATCGGGATGTGCCATT...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR CCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGGACAGGGTTTCACCGTaGTCTCGAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVDRVSP*SRTPDL
Trigger: GAGGTCAGGAGTTCGAGACCACGGTGAAACCCTGTC...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTCCAAACATGGAACCTaGAATGTGCTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFSKHGT*NVLPWA
Trigger: GGCCCAGGGAAGCACATTCCAGGTTCCATGTTTGGA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTCGACACAGGGAGAAGCTaGGAACTAACCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LQNTIYPMELTPESPHAVDTGRS*ELTLPE
Trigger: TTCAGGAAGGGTTAGTTCCCAGCTTCTCCCTGTGTC...GACAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCGTGGCTCTTTGTCTCTaGTTTCTTTCCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIVALCL*FLSPGT
Trigger: TGTGCCAGGGGAAAGAAACCAGAGACAAAGAGCCAC...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAAGTACCGGACACTGTTaGTGTCAGATTCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAISTGHC*CQIHVF
Trigger: AAACACATGAATCTGACATCAACAGTGTCCGGTACT...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAATTAGGCCCAGACTCTaGGGGTATGATCCCATGATC +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRIRPRL*GYDPMI
Trigger: GATCATGGGATCATACCCTCAGAGTCTGGGCCTAAT...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCGTATTCTCGCAGTGCTaGAGGCTCACACTAGTGTAT +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIVFSQC*RLTLVY
Trigger: ATACACTAGTGTGAGCCTTCAGCACTGCGAGAATAC...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACAGTATTCTCGCAGTGCTaGAGGCTCACACTAGTGTAT +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTVFSQC*RLTLVY
Trigger: ATACACTAGTGTGAGCCTTCAGCACTGCGAGAATAC...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACAGGATCTTGTTTGTGGTaGAGGAATCCCACACGATCA +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTGSCLW*RNPTRS
Trigger: TGATCGTGTGGGATTCCTTCACCACAAACAAGATCC...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396335.8
CDS-3UTR TCA 90 bp TCGGGGGAAACTCGTAGAGTGCTAACGCGGTTTTCATGTCCAAACAGGATGGAGCTCATCGGACACTGTTaGTGTCAGATTCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: SGETRRVLTRFSCPNRMELIGHC*CQIHVF
Trigger: AAACACATGAATCTGACATCAACAGTGTCCGATGAG...CTCCATCCTGTTTGGACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR GCA 90 bp CTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTCTCCTCCTCTTATCTTTaGACCAGTCCATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LQNTIYPMELTPESPHAVSSSYL*TSPCTG
Trigger: TCCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGA...GACAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGATCCTCCTCTTATCTTTaGACCAGTCCATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRSSSYL*TSPCTG
Trigger: TCCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGA...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGAAGTCCACGCTGGATaGTCCAAATATGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQEVHAG*SKYDAF
Trigger: GAAAGCATCATATTTGGAGCATCCAGCGTGGACTTC...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATGCGAAGGAGGCTTCCTaGCCATGCGGGGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNAKEAS*PCGEWK
Trigger: CTTCCACTCCCCGCATGGGCAGGAAGCCTCCTTCGC...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TGTGCATGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTAAGTTTTCCATGCTTTaGCCATTTCCATGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: CACPSQTCKGIRLHHRVAKFSML*PFPCWY
Trigger: ATACCAACATGGAAATGGGCAAAGCATGGAAAACTT...AGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAATTTGCTATATGAGTaGGGGCTGCCTATGGATGGG +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNINLLYE*GLPMDG
Trigger: CCCATCCATAGGCAGCCCCCACTCATATAGCAAATT...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGAGTCTGTGGTATGTCTaGAAGAGTGACCCAATTCTC +
Preference number: 4 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQSLWYV*KSDPIL
Trigger: GAGAATTGGGTCACTCTTCCAGACATACCACAGACT...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAGTTGTTGAGACTTCTTaGAAACTGGTCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESVVETS*KLVSEL
Trigger: GAGCTCTGAGACCAGTTTTCAAGAAGTCTCAACAAC...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGGAGGGTATGATCCCATaGTCCAGAGCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVEGMIP*SRAESS
Trigger: ACTGCTTTCTGCTCTGGATCATGGGATCATACCCTC...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGTGCACTGTCAGAAGATaGTTAGGCCCAGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVCTVRR*LGPDSE
Trigger: CTCAGAGTCTGGGCCTAATCATCTTCTGACAGTGCA...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCAGCTGAATTCTACTGGTaGCAGAATGAGTTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESAEFYW*QNELRL
Trigger: TAGCCTCAACTCATTCTGTCACCAGTAGAATTCAGC...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCACATCATCATCATCCATaGGTCAAACCACCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESHHHHP*VKPPVL
Trigger: AAGGACAGGTGGTTTGACTCATGGATGATGATGATG...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATCTGGAAGAGTCTCTCTaGGGAGCAGGGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNLEESL*GAGPGA
Trigger: AGCTCCAGGCCCTGCTCCTCAGAGAGACTCTTCCAG...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAGCCCATCACGATACCTaGACAAGCAGTTGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIAHHDT*TSSCEG
Trigger: ACCCTCACAACTGCTTGTTCAGGTATCGTGATGGGC...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATGGTGGGAGGATCACCTaGGGTTGGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNGGRIT*GWEFET
Trigger: GGTCTCGAACTCCCAACCTCAGGTGATCCTCCCACC...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTCCTCCTCTTATCTTTaGACCAGTCCATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFSSSYL*TSPCTG
Trigger: TCCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATGGCAACCTCCCTATCTaGCCGCAGGTCATAGAGGCG +
Preference number: 4 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNGNLPI*PQVIEA
Trigger: CGCCTCTATGACCTGCGGGCAGATAGGGAGGTTGCC...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAGTCCACGCTGGATaGTCCAAATATGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHREVHAG*SKYDAF
Trigger: GAAAGCATCATATTTGGAGCATCCAGCGTGGACTTC...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATCTTTGTCACCCAGGCTaGAGTGGCTCGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNLCHPG*SGSTSA
Trigger: AGCCGAGGTCGAGCCACTGCAGCCTGGGTGACAAAG...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR GCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCACGCAGTGCAGGAACCTaGCATGGGTGGGACGATTCT +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSRSAGT*HGWDDS
Trigger: AGAATCGTCCCACCCATGGCAGGTTCCTGCACTGCG...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCCTTTCACCATTGGTGTaGTGGTTAGATAACCTTGGG +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNILSPLV*WLDNLG
Trigger: CCCAAGGTTATCTAACCAGCACACCAATGGTGAAAG...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATAGCGTCTCGTTCTCGTaGAGCCCCTCGGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNSVSFS*SPSVAI
Trigger: GATGGCAACCGAGGGGCTGCACGAGAACGAGACGCT...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396335.8
CDS-3UTR GCA 90 bp GCCTTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTTGCAGGGATACATGGAGAAATGGAGAATTTTGGTaGCTCTTATCACTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AFLGFPSVEATACRDTWRNGEFW*LLSLRR
Trigger: TCTTCTGAGTGATAAGAGGCACCAAAATTCTCCATT...TCTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp AATGGAGAATTTTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTTTCTGCCCAGTCCCACTaGAGCCTCATCTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: NGEFWCLLSLRRQIVHAVSAQSH*SLIFPT
Trigger: GGTGGGGAAGATGAGGCTGCAGTGGGACTGGGCAGA...AACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAATTCTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp ATAGTACATGCAGTTGCACATGTGGTTGCAAGTTTTCCATGCTTTGCCCATTTCTGCCCAAGCCAGACTTaGAAGGGGATCAGACTGCAT +
Preference number: 4 (lower is better)
Translates to: IVHAVAHVVASFPCFAHFCPSQT*KGIRLH
Trigger: ATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCA...GAAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCATGTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGAATGGCACATCCCGATaGGGCATAAGCACATGCCAT +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVNGTSR*GISTCH
Trigger: ATGGCATGTGCTTATGCCCCATCGGGATGTGCCATT...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR CCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCATTTCTTTGGAATAGATaGCAACCTCCCTATCTGCCC +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISFLWNR*QPPYLP
Trigger: GGGCAGATAGGGAGGTTGCCATCTATTCCAAAGAAA...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCACCTGGGCCCTTAAAGTaGCTTTTTGGATTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: RENALSKWHSDIIIIHESPGPLK*LFGLES
Trigger: ACTTTCCAATCCAAAAAGCCACTTTAAGGGCCCAGG...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGACAGAGACTACTGGCATaGGAGAAAGATCACCTTGAT +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRQRLLA*EKDHLD
Trigger: ATCAAGGTGATCTTTCTCCCATGCCAGTAGTCTCTG...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GTGGCTCTCCTCAATCATCCTGTCACCTCTTTCTTTGCCAAGCTCTTCCAAGGCGACCTTTCATATACATaGAATCCTACAACATGTGGC +
Preference number: 4 (lower is better)
Translates to: VALLNHPVTSFFAKLFQGDLSYT*NPTTCG
Trigger: GCCACATGTTGTAGGATTCCATGTATATGAAAGGTC...GCCTTGGAAGAGCTTGGCAAAGAAAGAGGTGACAGGATGATTGAGGAGAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATACCTGTCTCTGCAACTTaGAAGCTGTGCAGCTATGGG +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIPVSAT*KLCSYG
Trigger: CCCATAGCTGCACAGCTTCCAAGTTGCAGAGACAGG...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GCTGGATGCTCCAAATATGATGCTTTCTTTGGAATAGATGGCAACCTCCCTATCCAAAGGCATCTCCACTaGGGTAGTACCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: AGCSKYDAFFGIDGNLPIQRHLH*GSTCDT
Trigger: AGTATCGCAGGTACTACCCCAGTGGAGATGCCTTTG...GATAGGGAGGTTGCCATCTATTCCAAAGAAAGCATCATATTTGGAGCATCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR CAA 72 bp CAAGTTTTCCATGCTTTGCCCATTTCCATGTTGGTATaGGCAGCCCCTATGGTGGCTCTAATTGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QVFHALPISMLV*AAPMVALIVLL
Trigger: CAAGAGGACAATTAGAGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR CAA 72 bp TGGTTGCAAGTTTTCCATGCTTTGCCCATTTCCATGTaGGTATTGGCAGCCCCTATGGTGGCTCTAATTGTC +
Preference number: 4 (lower is better)
Translates to: WLQVFHALPISM*VLAAPMVALIV
Trigger: GACAATTAGAGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAACTTGCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
3UTR CAA 72 bp ATGCAGTTGCACATGTGGTTGCAAGTTTTCCATGCTTaGCCCATTTCCATGTTGGTATTGGCAGCCCCTATG +
Preference number: 4 (lower is better)
Translates to: MQLHMWLQVFHA*PISMLVLAAPM
Trigger: CATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAAACTTGCAACCACATGTGCAACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR TCA 90 bp AATGGAGAATTTTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTTCACCTTCCCATCCTGTaGCGAGCTCACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: NGEFWCLLSLRRQIVHAVHLPIL*RAHDPP
Trigger: AGGAGGATCGTGAGCTCGTCACAGGATGGGAAGGTG...AACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAATTCTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR TCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATGCATGTCAGAGTTGGTaGAGCTGCAGGCCGACAGGT +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNACQSW*SCRPTG
Trigger: ACCTGTCGGCCTGCAGCTTCACCAACTCTGACATGC...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACAAGTACCGGACACTGTTaGTGTCAGATTCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTSTGHC*CQIHVF
Trigger: AAACACATGAATCTGACATCAACAGTGTCCGGTACT...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp CAGAAAGCAGTCCCATCGGGGGAAACTCGTAGAGTGCTAACGCGGTTTTCATGTTGGATGCTCCAAATATaGTGCTTTCTTTGGAATAGA +
Preference number: 4 (lower is better)
Translates to: QKAVPSGETRRVLTRFSCWMLQI*CFLWNR
Trigger: TCTATTCCAAAGAAAGCATCATATTTGGAGCATCCA...ACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGATGGGACTGCTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR TCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAATTAGGCCCAGACTCTaGGGGTATGATCCCATGATC +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIIRPRL*GYDPMI
Trigger: GATCATGGGATCATACCCTCAGAGTCTGGGCCTAAT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp TTAATACACAATACTCTTTATTGTAAATGCCAATGCAATGCAGGTGTTCCAGCATGCAGCTCCACATCGTaGAGCTTGGCTCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LIHNTLYCKCQCNAGVPACSSTS*SLARSS
Trigger: GGAGGAGCGAGCCAAGCTGCACGATGTGGAGCTGCA...TGCTGGAACACCTGCATTGCATTGGCATTTACAATAAAGAGTATTGTGTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR GCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGATTCCAGGCATCACAGTaGACATCGAGAAATATCAGA +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRFQASQ*TSRNIR
Trigger: TCTGATATTTCTCGATGTGCACTGTGATGCCTGGAA...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAGGTTCATCCATGTTaGAGCATGTGTCCACGCTTT +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFKVHPC*SMCPRF
Trigger: AAAGCGTGGACACATGCTGCAACATGGATGAACCTT...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TTTCCATGCTTTGCCCATTTCCATGTTGGTATTGGCAGCCCCTATGGTGGCTCTTATTGTAAATGCCAATaGAATGCAGGTGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FPCFAHFHVGIGSPYGGSYCKCQ*NAGVPA
Trigger: TGCTGGAACACCTGCATTGCATTGGCATTTACAATA...AGAGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp TTTTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTTGCACATGTGAGGACTTTGTTCCCGTaGCCTTTGAGGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FWCLLSLRRQIVHAVAHVRTLFP*PLRVLL
Trigger: CAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCT...CACATGTGCAACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTTTCTTTGGAATAGATaGCAACCTCCCTATCTGCCC +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFFLWNR*QPPYLP
Trigger: GGGCAGATAGGGAGGTTGCCATCTATTCCAAAGAAA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CCA 90 bp TATGATGCTTTCTTTGGAATAGATGGCAACCTCCCTATCTGCCCGCAGGTCATATTTCTTTGGAATAGATaGCAACCTCCCTATCTGCCC +
Preference number: 4 (lower is better)
Translates to: YDAFFGIDGNLPICPQVIFLWNR*QPPYLP
Trigger: GGGCAGATAGGGAGGTTGCCATCTATTCCAAAGAAA...TATGACCTGCGGGCAGATAGGGAGGTTGCCATCTATTCCAAAGAAAGCATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR CCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAACGCCCTGTCCAAGTaGCACAGTGACATCATCATC +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSINALSK*HSDIII
Trigger: GATGATGATGTCACTGTGCCACTTGGACAGGGCGTT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAGACAGGGTTTCACCGTaGTCTCGAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSDRVSP*SRTPDL
Trigger: GAGGTCAGGAGTTCGAGACCACGGTGAAACCCTGTC...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATGCCCAGCTCCAGCTCTaGAAGAGTCTCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNAQLQL*KSLSEE
Trigger: CTCCTCAGAGAGACTCTTCCAGAGCTGGAGCTGGGC...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTGTGGGAGAGAGGGTTaGGGATGCCACCACAAGGAG +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNCGREG*GCHHKE
Trigger: CTCCTTGTGGTGGCATCCCCAACCCTCTCTCCCACA...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGCCCCTTCACCACAATTaGTTTGGTAGGTTTATCCCC +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVPLHHN*FGRFIP
Trigger: GGGGATAAACCTACCAAACCAATTGTGGTGAAGGGG...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAGCAAGTGGTTTAGCATaGCAATCCTTACAAAGGATC +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRASGLA*QSLQRI
Trigger: GATCCTTTGTAAGGATTGCCATGCTAAACCACTTGC...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GCTTTGCCCATTTCCATGTTGGTATTGGCAGCCCCTATGGTGGCTCTAATTGTCGAGAATGGAGAATTTTaGTGCCTCTTATCACTCAGA +
Preference number: 4 (lower is better)
Translates to: ALPISMLVLAAPMVALIVENGEF*CLLSLR
Trigger: TCTGAGTGATAAGAGGCACCAAAATTCTCCATTCTC...GACAATTAGAGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR TCA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATTCCTTCTGGTCTTCATaGCAAACTGCCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNSFWSS*QTAPGP
Trigger: AGGCCCTGGGGCAGTTTGTCATGAAGACCAGAAGGA...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp ATACACAATACTCTTTATTGTAAATGCCAATGCAATGCAGGTGTTCCAGCATACTGTTCCCGTGGCCTTTaGGGGTCCTTCTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: IHNTLYCKCQCNAGVPAYCSRGL*GSFWSS
Trigger: TGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACA...GTATGCTGGAACACCTGCATTGCATTGGCATTTACAATAAAGAGTATTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR TCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAAGTACCGGACACTGTTaGTGTCAGATTCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRSTGHC*CQIHVF
Trigger: AAACACATGAATCTGACATCAACAGTGTCCGGTACT...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAGTATTCTCGCAGTGCTaGAGGCTCACACTAGTGTAT +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIVFSQC*RLTLVY
Trigger: ATACACTAGTGTGAGCCTTCAGCACTGCGAGAATAC...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAAAATACTGTACTTaGAGGTATTCTCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SIKSALPEEGSRHHSAHREKYCT*RYSRSA
Trigger: AGCACTGCGAGAATACCTTCAAGTACAGTATTTTTC...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGAAAAATACTGTACTTaGAGGTATTCTCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SALPEEGSRHHSAHREISEKYCT*RYSRSA
Trigger: AGCACTGCGAGAATACCTTCAAGTACAGTATTTTTC...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGCATCATCATCATCCATaGGTCAAACCACCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVHHHHP*VKPPVL
Trigger: AAGGACAGGTGGTTTGACTCATGGATGATGATGATG...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATCATGGAGCTTACCCCTaGGTCTCCACATGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNHGAYP*VSTCCH
Trigger: GTGACAGCATGTGGAGACTCAGGGGTAAGCTCCATG...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGATTCCAGGCATCACAGTaGACATCGAGAAATATCAGA +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRFQASQ*TSRNIR
Trigger: TCTGATATTTCTCGATGTGCACTGTGATGCCTGGAA...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAGTCACAGTCTACTTTaGACATATCCTGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: HKISTSRGRFQASQCTSRSHSLL*TYPEDA
Trigger: AGCATCTTCAGGATATGTGCAAAGTAGACTGTGACT...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGGCCCTTACAACCCTGTaGTGTTTTAAGCCACTTATA +
Preference number: 4 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLALTTL*CFKPLI
Trigger: TATAAGTGGCTTAAAACAGCACAGGGTTGTAAGGGC...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATGGGCGTGGTGGTGCATaGCTTGTAATCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNGRGGA*LVIPAT
Trigger: AGTAGCTGGGATTACAAGGCATGCACCACCACGCCC...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGGCAACTTGGAAGCTGTaGAGCTATGGGCAAGTTATT +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVATWKL*SYGQVI
Trigger: AATAACTTGCCCATAGCTGCACAGCTTCCAAGTTGC...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGGAATCCTACAACATGTaGCTCTTTGTCTCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLESYNM*LFVSGF
Trigger: GAAACCAGAGACAAAGAGCCACATGTTGTAGGATTC...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 72 bp TTTTCCAGAGACTACTGGCATGGGAGAAAGATCACCTaGATGGCTAATGGAACGTGTGCATCTGTATTCTTG +
Preference number: 4 (lower is better)
Translates to: FSRDYWHGRKIT*MANGTCASVFL
Trigger: CAAGAATACAGATGCACACGTTCCATTAGCCATCAAGGTGATCTTTCTCCCATGCCAGTAGTCTCTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCGAAACATTTGTCACATaGGCCAAATACATTAACGAG +
Preference number: 4 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIETFVT*AKYINE
Trigger: CTCGTTAATGTATTTGGCTCATGTGACAAATGTTTC...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGTCAGAGCTCGTTGTTTaGAACATTTGTCACATGAGC +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVSELVV*NICHMS
Trigger: GCTCATGTGACAAATGTTTCAAACAACGAGCTCTGA...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGAATTTCTGCACATGTTaGACAGTAGCTGAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLNFCTC*TVAELL
Trigger: CAACAACTCAGCTACTGTTCAACATGTGCAGAAATT...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACAGGTGACAGAATGAGTTaGGGCTACTATAATTTAGAA +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTGDRMS*GYYNLE
Trigger: TTCTAAATTATAGTAGCCTCAACTCATTCTGTCACC...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp AATTTCCCTTGGGGAGGCTGCCAATTACCGTGGAAAACACACAGGTTGGAAACAGCAATGCCCTACTTTTaGTTAAATATCTTTAGCGAG +
Preference number: 4 (lower is better)
Translates to: NFPWGGCQLPWKTHRLETAMPYF*LNIFSE
Trigger: CTCGCTAAAGATATTTAATCAAAAGTAGGGCATTGC...TGTTTCCAACCTGTGTGTTTTCCACGGTAATTGGCAGCCTCCCCAAGGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTCTTTGGAATTGGAATTTaGTTCTATCACAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: LQNTIYPMELTPESPHAVFGIGI*FYHRPV
Trigger: GACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA...GACAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTTGCACATAGGCTGCTaGAACCTCACACAAAAATTA +
Preference number: 4 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLLHIGC*NLTQKL
Trigger: TAATTTTTGTGTGAGGTTGCAGCAGCCTATGTGCAA...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATCAAAGGCATCTCCACTaGGGTAGTACCGGACACTGT +
Preference number: 4 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNQRHLH*GSTGHC
Trigger: ACAGTGTCCGGTACTACCCCAGTGGAGATGCCTTTG...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAAACGCCCTGTCCAAGTaGCACAGTGACATCATCATC +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSNALSK*HSDIII
Trigger: GATGATGATGTCACTGTGCCACTTGGACAGGGCGTT...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGACTAAAGCACTGGACTTaGCTTCATGTCACAGATATT +
Preference number: 4 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGLKHWT*LHVTDI
Trigger: AATATCTGTGACATGAAGCCAAGTCCAGTGCTTTAG...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATACGCATTCTAAAGCACTaGACTTGGCTTCATGTCACA +
Preference number: 4 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIRILKH*TWLHVT
Trigger: TGTGACATGAAGCCAAGTCCAGTGCTTTAGAATGCG...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGACCTCTTACAGTCCAGTaGTTTTTAGTCTATTCACAG +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRPLTVQ*FLVYSQ
Trigger: CTGTGAATAGACTAAAAACCACTGGACTGTAAGAGG...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp GAATGGAGAATTTTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTTGCCCATTTCCATGTTaGTATTGGCAGCCCCTATGG +
Preference number: 4 (lower is better)
Translates to: EWRILVPLITQKTNSTCSCPFPC*YWQPLW
Trigger: CCATAGGGGCTGCCAATACCAACATGGAAATGGGCA...ACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAATTCTCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp GCTGGATGCTCCAAATATGATGCTTTCTTTGGAATAGATGGCAACCTCCCTATCTACCTGCGATACTTTTaGCAAATGACTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AGCSKYDAFFGIDGNLPIYLRYF*QMTSSC
Trigger: GCAAGAGGAAGTCATTTGCCAAAAGTATCGCAGGTA...GATAGGGAGGTTGCCATCTATTCCAAAGAAAGCATCATATTTGGAGCATCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558519.5
3UTR CAA 72 bp CTTTCTTTGTATTCCATTCTGTGGATGCGCCATATTTaGTTCATCGATTCATCCACTGTGGAACATTGGGGC +
Preference number: 4 (lower is better)
Translates to: LSLYSILWMRHI*FIDSSTVEHWG
Trigger: GCCCCAATGTTCCACAGTGGATGAATCGATGAACAAAATATGGCGCATCCACAGAATGGAATACAAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 72 bp CATCCATGTTGCAGCATGTGTCCACGCTTTCTTTCTTaGTATTCCATTCTGTGGATGCGCCATATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: HPCCSMCPRFLS*YSILWMRHILF
Trigger: GAACAAAATATGGCGCATCCACAGAATGGAATACAAAGAAAGAAAGCGTGGACACATGCTGCAACATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTGGATGCTCCAAATATaGTGCTTTCTTTGGAATAGA +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFWMLQI*CFLWNR
Trigger: TCTATTCCAAAGAAAGCATCATATTTGGAGCATCCA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR TCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGTGACAGAATGAGTTaGGGCTACTATAATTTAGAA +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRGDRMS*GYYNLE
Trigger: TTCTAAATTATAGTAGCCTCAACTCATTCTGTCACC...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATCTTTGCACCAGTCCATaGACAGGACTTTGTTCCCGT +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNLCTSP*TGLCSR
Trigger: ACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAG...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR GCA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGATTTGGAATTGGAATTTaGTTCTATCACAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRFGIGI*FYHRPV
Trigger: GACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTTTGGAATTGGAATTTaGTTCTATCACAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFFGIGI*FYHRPV
Trigger: GACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR GCA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACAAGACTCCTATCTTGCTaGAAATTTGATTCCATTAAC +
Preference number: 4 (lower is better)
Translates to: SVHKISTSRGRFQASQCTRLLSC*KFDSIN
Trigger: GTTAATGGAATCAAATTTGCAGCAAGATAGGAGTCT...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTCACAAAAATTACTTCTaGAAAGACATCTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: LPEEGSRHHSAHREISDFHKNYF*KDICLA
Trigger: TGCTAGGCAGATGTCTTTGCAGAAGTAATTTTTGTG...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAAGAGGAGATGAGGAATaGGGGAAGATTGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSRGDEE*GKIEKG
Trigger: ACCCTTCTCAATCTTCCCCCATTCCTCATCTCCTCT...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CCA 90 bp CTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTCTTTTTCTTTACCTCCTaGAATATGCACACAGTTTAC +
Preference number: 4 (lower is better)
Translates to: LQNTIYPMELTPESPHAVFFFTS*NMHTVY
Trigger: GTAAACTGTGTGCATATTCCAGGAGGTAAAGAAAAA...GACAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 72 bp TTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATaGGCTTTCCCTTCAATTCAGAGAAAACGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: FFALRSICLQTP*AFPSIQRKRPV
Trigger: GACAGGGCGTTTTCTCTGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATGGAGAAAGATCACCTTaGTGGCTAATGGAACGTGTG +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNGERSP*WLMERV
Trigger: CACACGTTCCATTAGCCATCAAGGTGATCTTTCTCC...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGGTCACAAGGATTACATaGATCGGTATATACAAAGTG +
Preference number: 4 (lower is better)
Translates to: EEGSRHHSAHREISDFKVVTRIT*IGIYKV
Trigger: CACTTTGTATATACCGATTCATGTAATCCTTGTGAC...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp TTAATACACAATACTCTTTATTGTAAATGCCAATGCAATGCAGGTGTTCCAGCAAGTAGGCTGGGATTCTaGAGCCTCTATAACGTGGCT +
Preference number: 4 (lower is better)
Translates to: LIHNTLYCKCQCNAGVPASRLGF*SLYNVA
Trigger: AGCCACGTTATAGAGGCTTCAGAATCCCAGCCTACT...TGCTGGAACACCTGCATTGCATTGGCATTTACAATAAAGAGTATTGTGTATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATGTTTACAGGAGCATCTaGTCCAGTCCTGTCTTATGG +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNVYRSI*SSPVLW
Trigger: CCATAAGACAGGACTGGACCAGATGCTCCTGTAAAC...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCATGTAATAAGACTCGGTaGAAATCCTGTCTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSCNKTR*KSCLCN
Trigger: GTTGCAGAGACAGGATTTTCACCGAGTCTTATTACA...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCATTCCAGGCATCACAGTaGACATCGAGAAATATCAGA +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSFQASQ*TSRNIR
Trigger: TCTGATATTTCTCGATGTGCACTGTGATGCCTGGAA...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTTTCTTTGGAATAGATaGCAACCTCCCTATCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNFLWNR*QPPYLP
Trigger: GGGCAGATAGGGAGGTTGCCATCTATTCCAAAGAAA...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CCA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATATACAATCTATCCCATaGAGCTTACCCCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNIQSIP*SLPLSL
Trigger: GAGACTCAGGGGTAAGCTCCATGGGATAGATTGTAT...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 72 bp CTCTCTTCTAGCTACTTGAAAATACACAGTAAATTATaGTTAGCGATAGTCACCCTACAGTGCCGCCAAACA +
Preference number: 4 (lower is better)
Translates to: LSSSYLKIHSKL*LAIVTLQCRQT
Trigger: TGTTTGGCGGCACTGTAGGGTGACTATCGCTAACAATAATTTACTGTGTATTTTCAAGTAGCTAGAAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
3UTR CAA 72 bp CCATATTTTGTTCATCGATTCATCCACTGTGGAACATaGGGGCTGTTTCAGCTTTGGGCTATTATGAGTAAT +
Preference number: 4 (lower is better)
Translates to: PYFVHRFIHCGT*GLFQLWAIMSN
Trigger: ATTACTCATAATAGCCCAAAGCTGAAACAGCCCCAATGTTCCACAGTGGATGAATCGATGAACAAAATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCATTAACGAGAAAGGTCTaGTCACACATCTTTTACCCA +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSLTRKV*SHIFYP
Trigger: TGGGTAAAAGATGTGTGATCAGACCTTTCTCGTTAA...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR TCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCACTACTGGTGACAGAATaGGTTGAGGCTACTATAATT +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSLLVTE*VEATII
Trigger: AATTATAGTAGCCTCAACTCATTCTGTCACCAGTAG...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCATGGATGCTCCAAATATaGTGCTTTCTTTGGAATAGA +
Preference number: 4 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSWMLQI*CFLWNR
Trigger: TCTATTCCAAAGAAAGCATCATATTTGGAGCATCCA...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR TCA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATGAAAAATACTGTACTTaGAGGTATTCTCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNEKYCT*RYSRSA
Trigger: AGCACTGCGAGAATACCTTCAAGTACAGTATTTTTC...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR GCA 90 bp GAATGGAGAATTTTGGTGCCTCTTATCACTCAGAAGACAAATAGTACATGCAGTACTCTTTATTGTAAATaGCAATGCAATGCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: EWRILVPLITQKTNSTCSTLYCK*QCNAGV
Trigger: AACACCTGCATTGCATTGGCATTTACAATAAAGAGT...ACTGCATGTACTATTTGTCTTCTGAGTGATAAGAGGCACCAAAATTCTCCATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS GCA 90 bp AGGCTCTCGGCCTCGCTCTTCAGCGACGCCAGCGTCTCGTTCTCGTaGAGCCCCTCGGTTGCCATCTTCGCGCGGGGACGCAGCGGAGAG +
Preference number: 5 (lower is better)
Translates to: RLSASLFSDASVSFS*SPSVAIFARGRSGE
Trigger: CTCTCCGCTGCGTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCACGAGAACGAGACGCTGGCGTCGCTGAAGAGCGAGGCCGAGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358784.11
ENST00000561313.5
CDS CCA 90 bp TCTGAGGGGGCCAGGTCCAAGCAGAGGACGTCAGCCCCATGTCCGTaGAAGCTCTGCAGCAGCTGCCCGCTCTCCACGTCCCACAGGGCA +
Preference number: 5 (lower is better)
Translates to: SEGARSKQRTSAPCP*KLCSSCPLSTSHRA
Trigger: TGCCCTGTGGGACGTGGAGAGCGGGCAGCTGCTGCAGAGCTTCCACGGACATGGGGCTGACGTCCTCTGCTTGGACCTGGCCCCCTCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000558519.5
ENST00000559348.5
ENST00000559541.1
CDS GCA 90 bp AAGCAGAGGACGTCAGCCCCATGTCCGTGGAAGCTCTGCAGCAGCTaGCCGCTCTCCACGTCCCACAGGGCACATGTGCCATCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: KQRTSAPCPWKLCSS*PLSTSHRAHVPSPL
Trigger: GAGCGGCGATGGCACATGTGCCCTGTGGGACGTGGAGAGCGGGCAGCTGCTGCAGAGCTTCCACGGACATGGGGCTGACGTCCTCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000558519.5
ENST00000559348.5
ENST00000559541.1
CDS GCA 90 bp GCCAGGTCCAAGCAGAGGACGTCAGCCCCATGTCCGTGGAAGCTCTaGAGCAGCTGCCCGCTCTCCACGTCCCACAGGGCACATGTGCCA +
Preference number: 5 (lower is better)
Translates to: ARSKQRTSAPCPWKL*SSCPLSTSHRAHVP
Trigger: TGGCACATGTGCCCTGTGGGACGTGGAGAGCGGGCAGCTGCTGCAGAGCTTCCACGGACATGGGGCTGACGTCCTCTGCTTGGACCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000558519.5
ENST00000559348.5
ENST00000559541.1
CDS-3UTR CAA 90 bp TGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTGCCCCGTGCAGCCCCTCGGTaGCCATCTTCGCGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: CPSQTCKGIRLHHRVALPRAAPR*PSSRGD
Trigger: GTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCACG...GGGCAGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CAA 90 bp CAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGGTCGTGCAGCCCCTCGGTaGCCATCTTCGCGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: QGTCAIAARCQDLHVRVGRAAPR*PSSRGD
Trigger: GTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCACG...ACCAACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR CAA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGGAGACCCGGGACCCTTaGAGAACATCCCAGACGTTG +
Preference number: 5 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQETRDP*RTSQTL
Trigger: CAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTC...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS GCA 90 bp TTGTTCCCGTGGCCTTTGAGGGTCCTTCTGGTCTTCATGACAAACTaGCCCAGGGCCTCCACCCGCTCCGCCACCTGGTGCAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: LFPWPLRVLLVFMTN*PRASTRSATWCSST
Trigger: TGTGGAGCTGCACCAGGTGGCGGAGCGGGTGGAGGCCCTGGGGCAGTTTGTCATGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS-3UTR CAA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGGAGGATCACCTGAGGTaGGGAGTTCGAGACCAGTGT +
Preference number: 5 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQEDHLR*GVRDQC
Trigger: ACACTGGTCTCGAACTCCCAACCTCAGGTGATCCTC...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS CCA 90 bp GTGTGTATGAGGCCTGGGCTCTGGCTGAGCATACCTTCCTGGGATTaGGAGAAAGGCAGTGAGGACTCAGGGTTCGGGGCCCTCATAGGC +
Preference number: 5 (lower is better)
Translates to: VCMRPGLWLSIPSWD*EKGSEDSGFGALIG
Trigger: GCCTATGAGGGCCCCGAACCCTGAGTCCTCACTGCCTTTCTCCCAATCCCAGGAAGGTATGCTCAGCCAGAGCCCAGGCCTCATACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CCA 90 bp AGTGAGGCAGCCAGGAAAGGTGCTAGCACCTCCCACATGCCAGGGTaGGGAAACAGAGATGACAAAGATCAGGGCGCCAGCCATCCCTCC +
Preference number: 5 (lower is better)
Translates to: SEAARKGASTSHMPG*GNRDDKDQGASHPS
Trigger: GGAGGGATGGCTGGCGCCCTGATCTTTGTCATCTCTGTTTCCCCACCCTGGCATGTGGGAGGTGCTAGCACCTTTCCTGGCTGCCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558122.1
CDS-3UTR CAA 90 bp TGCATGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTTCCACATCGTGCAGCTaGGCTCGCTCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CMPKPDLQGDQTASQGSSSTSCS*ARSSSS
Trigger: GCTGGAGGAGGAGCGAGCCAAGCTGCACGATGTGGA...AGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CAA 90 bp TCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGGTGAAGCTGCAGGCCGACATCTGCATGTCAGAGTaGGTGAAGCTGCAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: SPLAVRICMSELVKLQADICMSE*VKLQAD
Trigger: GTCGGCCTGCAGCTTCACCAACTCTGACATGCAGAT...GTCGGCCTGCAGCTTCACCAACTCTGACATGCAGATCCTGACAGCGAGCGGCGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR CAA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCTCCAGGCGTCCTCTTTaGAAAGGATTTTCAGGTCAC +
Preference number: 5 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPSRRPL*KGFSGH
Trigger: GTGACCTGAAAATCCTTTCAAAAGAGGACGCCTGGA...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGCGTGCAGCCCCTCGGTaGCCATCTTCGCGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQRAAPR*PSSRGD
Trigger: GTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCACG...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358784.11
CDS CCA 90 bp TGCCTCAAGGATTCAAAGGGGAGAAAGCACAGTCCCTGTCCCTGTTaGAGGATGTGGGGCACTGAGGGAGAAGTCCACGCTGGATGCTCC +
Preference number: 5 (lower is better)
Translates to: CLKDSKGRKHSPCPC*RMWGTEGEVHAGCS
Trigger: GGAGCATCCAGCGTGGACTTCTCCCTCAGTGCCCCACATCCTCCAACAGGGACAGGGACTGTGCTTTCTCCCCTTTGAATCCTTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS CCA 90 bp GCTGCTCCACAGGGCCTGGGTGAGGTGATAAGACCGTGGAGGAAGTaGCTCTTGCAGCATAAGTGTCCACAAGAGAGCCCTTTGCGGATG +
Preference number: 5 (lower is better)
Translates to: AAPQGLGEVIRPWRK*LLQHKCPQESPLRM
Trigger: CATCCGCAAAGGGCTCTCTTGTGGACACTTATGCTGCAAGAGCCACTTCCTCCACGGTCTTATCACCTCACCCAGGCCCTGTGGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS-3UTR CAA 90 bp CATGTCAGAGTTGGTGAAGCTGCAGGCCGACAGGTAGTTGGTGTGCATAGCAACTCCACATCGTGCAGCTaGGCTCGCTCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HVRVGEAAGRQVVGVHSNSTSCS*ARSSSS
Trigger: GCTGGAGGAGGAGCGAGCCAAGCTGCACGATGTGGA...GTTGCTATGCACACCAACTACCTGTCGGCCTGCAGCTTCACCAACTCTGACATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR CAA 90 bp CACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGTTGTTCCCGTGGCCTTaGAGGGTCCTTCTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: HRAHVPSPLAVRICMSELLFPWP*RVLLVF
Trigger: GAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAA...CAACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR CAA 90 bp TGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTGCCCTCCATGCACAGGACTTaGTTCCCGTGGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: CPSQTCKGIRLHHRVALPSMHRT*FPWPLR
Trigger: CCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGA...GGGCAGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CAA 90 bp AGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGGTGTCCATGCACAGGACTTaGTTCCCGTGGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: RAHVPSPLAVRICMSELVSMHRT*FPWPLR
Trigger: CCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGA...CACCAACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR CAA 90 bp GAGTCCCAGTATCGGTGGTGCCACCTTTCAGCCAGCTGGCCTGGCAACTATGAGATCTGCATGTCAGAGTaGGTGAAGCTGCAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: ESQYRWCHLSASWPGNYEICMSE*VKLQAD
Trigger: GTCGGCCTGCAGCTTCACCAACTCTGACATGCAGAT...CTCATAGTTGCCAGGCCAGCTGGCTGAAAGGTGGCACCACCGATACTGGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS CCA 90 bp TTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTTGCAGGGATACATaGAGAGAAATCAGGACAGGGCCGGGCAGCTGGACCAGAGCACCT +
Preference number: 5 (lower is better)
Translates to: FLGFPSVEATACRDT*REIRTGPGSWTRAP
Trigger: AGGTGCTCTGGTCCAGCTGCCCGGCCCTGTCCTGATTTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS CCA 90 bp AGCTGCTGTAGCTCCAACTTACCCACAAGCAATGGCACATCCCGATaGGGCATAAGCACATGCCATCACCCACGTGCAGGGCATGGTGAC +
Preference number: 5 (lower is better)
Translates to: SCCSSNLPTSNGTSR*GISTCHHPRAGHGD
Trigger: GTCACCATGCCCTGCACGTGGGTGATGGCATGTGCTTATGCCCCATCGGGATGTGCCATTGCTTGTGGGTAAGTTGGAGCTACAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560075.1
CDS-3UTR CAA 90 bp TTACAGGAGCATCTGGTCCAGTCCTGTCTTATGGCTGTGCCCAGCTCCAGCTCTGAGACCCGGGACCCTTaGAGAACATCCCAGACGTTG +
Preference number: 5 (lower is better)
Translates to: LQEHLVQSCLMAVPSSSSETRDP*RTSQTL
Trigger: CAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTC...AGAGCTGGAGCTGGGCACAGCCATAAGACAGGACTGGACCAGATGCTCCTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS TCA 90 bp GGGCCGGGCAGCTGGACCAGAGCACCTTTAAGTAGGCTGGGATTCTaGAGCCTCTATAACGTGGCTGGGAACAATGCCTCACCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: GPGSWTRAPLSRLGF*SLYNVAGNNASPCL
Trigger: CAAACAAGGTGAGGCATTGTTCCCAGCCACGTTATAGAGGCTTCAGAATCCCAGCCTACTTAAAGGTGCTCTGGTCCAGCTGCCCGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS TCA 90 bp CTGGGATCCAGGTGTGCACACAGGAGGGTCCCAAACCCAGTGTGGTaGTATCTGAGTTGGTCTTCAAGGAAGAGTGAGAGCTGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: LGSRCAHRRVPNPVW*YLSWSSRKSESWPG
Trigger: ACCTGGCCAGCTCTCACTCTTCCTTGAAGACCAACTCAGATATCACCACACTGGGTTTGGGACCCTCCTGTGTGCACACCTGGATCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS GCA 90 bp CAAACACGGATAGGCCTTCTTGGGGTTTCCATCCGTAGAGGCAACTaGTTGCAGGGATACATGGAGAGAAATCAGGACAGGGCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: QTRIGLLGVSIRRGN*LQGYMERNQDRAGQ
Trigger: CTGCCCGGCCCTGTCCTGATTTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAAGGCCTATCCGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CAA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGTCCACATCGTGCAGCTaGGCTCGCTCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQSTSCS*ARSSSS
Trigger: GCTGGAGGAGGAGCGAGCCAAGCTGCACGATGTGGA...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp AGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGACCCGTTTTAATAGTCATATaGGAGACGCTTAGTGACCTG +
Preference number: 5 (lower is better)
Translates to: RGQGARSLQVQPEPAGRPVLIVI*ETLSDL
Trigger: CAGGTCACTAAGCGTCTCCAATATGACTATTAAAAC...GGGTCTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp GTCCAGGGGACAAGGTGCACGCAGCCTTCAGGTGCAGCCAGAACCTGCCGGCAGTGTTTACAAACACCATaGGCTTTCCCTTCAATTCAG +
Preference number: 5 (lower is better)
Translates to: VQGTRCTQPSGAARTCRQCLQTP*AFPSIQ
Trigger: CTGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACA...CTGCCGGCAGGTTCTGGCTGCACCTGAAGGCTGCGTGCACCTTGTCCCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp TGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTGCCCATTTCCATGTTGGTATaGGCAGCCCCTATGGTGGCT +
Preference number: 5 (lower is better)
Translates to: CPSQTCKGIRLHHRVALPISMLV*AAPMVA
Trigger: AGCCACCATAGGGGCTGCCAATACCAACATGGAAAT...GGGCAGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS GCA 90 bp CCTCATCGGACACTGTTGATGTCAGATTCATGTGTTTCAAAGGCCTaGACGCACTGGCCGGAGCGCATGTCCCACACCATGGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: PHRTLLMSDSCVSKA*THWPERMSHTMAFL
Trigger: CAAGAAAGCCATGGTGTGGGACATGCGCTCCGGCCAGTGCGTGCAGGCCTTTGAAACACATGAATCTGACATCAACAGTGTCCGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS CCA 90 bp TTAGGTGGGTACACAGCCTTCATTTCCCCCTGGAGTGAAGTTGCCTaGGGCAGGACAAAGTGGGAGGTCAGAAGCTCAGAGGAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: LGGYTAFISPWSEVA*GRTKWEVRSSEEEN
Trigger: GTTTTCCTCCTCTGAGCTTCTGACCTCCCACTTTGTCCTGCCCCAGGCAACTTCACTCCAGGGGGAAATGAAGGCTGTGTACCCACCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560085.1
CDS-3UTR CAA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAGAGACCCGGGACCCTTaGAGAACATCCCAGACGTTG +
Preference number: 5 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAIETRDP*RTSQTL
Trigger: CAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTC...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAATGGCCTGGCTGATTTaGGACCGAGTGGCCCATCAC +
Preference number: 5 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAIMAWLI*DRVAHH
Trigger: GTGATGGGCCACTCGGTCCAAAATCAGCCAGGCCAT...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS TCA 90 bp CCAGGTGTGCACACAGGAGGGTCCCAAACCCAGTGTGGTGATATCTaGGTTGGTCTTCAAGGAAGAGTGAGAGCTGGCCAGGTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: PGVHTGGSQTQCGDI*VGLQGRVRAGQVKE
Trigger: TTCTTTCACCTGGCCAGCTCTCACTCTTCCTTGAAGACCAACTCAGATATCACCACACTGGGTTTGGGACCCTCCTGTGTGCACACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CCA 90 bp CTCCTCTTATCTTTGCACCAGTCCATGCACAGGACTTTGTTCCCGTaGCCTTTGAGGGTCCTTCTGGTCTTCATGACAAACTGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LLLSLHQSMHRTLFP*PLRVLLVFMTNCPR
Trigger: CCTGGGGCAGTTTGTCATGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAGATAAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS CCA 90 bp ACACTGTTGATGTCAGATTCATGTGTTTCAAAGGCCTGCACGCACTaGCCGGAGCGCATGTCCCACACCATGGCTTTCTTGTCACATCCC +
Preference number: 5 (lower is better)
Translates to: TLLMSDSCVSKACTH*PERMSHTMAFLSHP
Trigger: GGGATGTGACAAGAAAGCCATGGTGTGGGACATGCGCTCCGGCCAGTGCGTGCAGGCCTTTGAAACACATGAATCTGACATCAACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000558519.5
ENST00000559348.5
ENST00000559541.1
CDS CCA 90 bp GATTCAAAGGGGAGAAAGCACAGTCCCTGTCCCTGTTGGAGGATGTaGGGCACTGAGGGAGAAGTCCACGCTGGATGCTCCAAATATGAT +
Preference number: 5 (lower is better)
Translates to: DSKGRKHSPCPCWRM*GTEGEVHAGCSKYD
Trigger: ATCATATTTGGAGCATCCAGCGTGGACTTCTCCCTCAGTGCCCCACATCCTCCAACAGGGACAGGGACTGTGCTTTCTCCCCTTTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS-3UTR CAA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGATCCACATCGTGCAGCTaGGCTCGCTCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRSTSCS*ARSSSS
Trigger: GCTGGAGGAGGAGCGAGCCAAGCTGCACGATGTGGA...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp GTTCAAACACGGATAGGCCTTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTTGTTGTTCCCGTGGCCTTaGAGGGTCCTTCTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: VQTRIGLLGVSIRRGNCLLFPWP*RVLLVF
Trigger: GAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAA...CAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAAGGCCTATCCGTGTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS TCA 90 bp CACTGGGGTAGTACCTGCAGAGAGAAAGTACTTTATCTACGGTTGTaGCTCCTGACCCTGGATGCCCATCAGAACCATGCTAGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: HWGSTCREKVLYLRL*LLTLDAHQNHARPL
Trigger: CAAGGGCCTAGCATGGTTCTGATGGGCATCCAGGGTCAGGAGTCACAACCGTAGATAAAGTACTTTCTCTCTGCAGGTACTACCCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557936.5
CDS GCA 90 bp CCCTGTTGGAGGATGTGGGGCACTGAGGGAGAAGTCCACGCTGGATaGTCCAAATATGATGCTTTCTTTGGAATAGATGGCAACCTCCCT +
Preference number: 5 (lower is better)
Translates to: PCWRMWGTEGEVHAG*SKYDAFFGIDGNLP
Trigger: AGGGAGGTTGCCATCTATTCCAAAGAAAGCATCATATTTGGAGCATCCAGCGTGGACTTCTCCCTCAGTGCCCCACATCCTCCAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS GCA 90 bp CACATGTGCCATCGCCGCTCGCTGTCAGGATCAAGATTAACAGCTTaGTCATCCAGACTCAAAGACTGTTCGCTTGCTGGGCTCACCAAT +
Preference number: 5 (lower is better)
Translates to: HMCHRRSLSGSRLTA*SSRLKDCSLAGLTN
Trigger: ATTGGTGAGCCCAGCAAGCGAACAGTCTTTGAGTCTGGATGAGCAAGCTGTTAATCTTGATCCTGACAGCGAGCGGCGATGGCACATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CCA 90 bp AGAACACTTATTATCCAAACCACCACAAGCAATGGCACATCCCGATaGGGCATAAGCACATGCCATCACCCACGTGCAGGGCATGGTGAC +
Preference number: 5 (lower is better)
Translates to: RTLIIQTTTSNGTSR*GISTCHHPRAGHGD
Trigger: GTCACCATGCCCTGCACGTGGGTGATGGCATGTGCTTATGCCCCATCGGGATGTGCCATTGCTTGTGGTGGTTTGGATAATAAGTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR CAA 90 bp ACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGTTGTTCCCGTGGCCTTaGAGGGTCCTTCTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TSHQSSVHKISTSRGRFQLFPWP*RVLLVF
Trigger: GAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAA...CTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp CATGTCAGAGTTGGTGAAGCTGCAGGCCGACAGGTAGTTGGTGTGCATAGCAACATCCTCCTCTTATCTTaGCACCAGTCCATGCACAGG +
Preference number: 5 (lower is better)
Translates to: HVRVGEAAGRQVVGVHSNILLLS*HQSMHR
Trigger: CCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGAT...GTTGCTATGCACACCAACTACCTGTCGGCCTGCAGCTTCACCAACTCTGACATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR CAA 90 bp GATGGAGACCCGGGACCCTTTGAGAACATCCCAGACGTTGATAGTGTAATCATTGAGACCCGGGACCCTTaGAGAACATCCCAGACGTTG +
Preference number: 5 (lower is better)
Translates to: DGDPGPFENIPDVDSVIIETRDP*RTSQTL
Trigger: CAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTC...AATGATTACACTATCAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR CAA 90 bp CGTGTTCATTCCCACAGGGCTATGGAGTCTGGTCAAAGAGAGGGGAGAGAGAATCGTAGAGGCAACTGCTaGCAGGGATACATGGAGAGA +
Preference number: 5 (lower is better)
Translates to: RVHSHRAMESGQREGRENRRGNC*QGYMER
Trigger: TCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACG...ATTCTCTCTCCCCTCTCTTTGACCAGACTCCATAGCCCTGTGGGAATGAACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS GCA 90 bp ACAAGGATCAATGACAACAGCATGAGAAGTGCTGGGATCCAGGTGTaGACACAGGAGGGTCCCAAACCCAGTGTGGTGATATCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: TRINDNSMRSAGIQV*TQEGPKPSVVISEL
Trigger: CAACTCAGATATCACCACACTGGGTTTGGGACCCTCCTGTGTGCACACCTGGATCCCAGCACTTCTCATGCTGTTGTCATTGATCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CCA 90 bp GCCCGTTCACAGGTGGGGACTCAGTCTGAAGCCAAGAGAGCACTCTaGAAGCTTCTGGGCAGGAGAATGAGAAAAGCAAACGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: ARSQVGTQSEAKRAL*KLLGRRMRKANVCF
Trigger: AAAACATACGTTTGCTTTTCTCATTCTCCTGCCCAGAAGCTTCCAGAGTGCTCTCTTGGCTTCAGACTGAGTCCCCACCTGTGAACGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS-3UTR CAA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCCTCAGAGCTCGTTGTTaGAAACATTTGTCACATGAG +
Preference number: 5 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSLRARC*KHLSHE
Trigger: CTCATGTGACAAATGTTTCAAACAACGAGCTCTGAG...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATATCCACATCGTGCAGCTaGGCTCGCTCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FGIGICFYHRPVTSPQSISTSCS*ARSSSS
Trigger: GCTGGAGGAGGAGCGAGCCAAGCTGCACGATGTGGA...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCTTGTTCCCGTGGCCTTaGAGGGTCCTTCTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: ISTSRGRFQASQCTSRNILFPWP*RVLLVF
Trigger: GAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAA...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCATTGTTCCCGTGGCCTTaGAGGGTCCTTCTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: SALPEEGSRHHSAHREISLFPWP*RVLLVF
Trigger: GAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAA...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCCATGCACAGGACTTaGTTCCCGTGGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: SVHKISTSRGRFQASQCTSMHRT*FPWPLR
Trigger: CCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGA...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCATCCATGCACAGGACTTaGTTCCCGTGGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: RENALSKWHSDIIIIHESSMHRT*FPWPLR
Trigger: CCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGA...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp TCAGTCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACAGTGACCGCGTGCTCCTaGTTTGTGGTGAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: SVHKISTSRGRFQASQCTVTACS*FVVKES
Trigger: GGATTCCTTCACCACAAACAAGGAGCACGCGGTCAC...TGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR CAA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAATCTGCATGTCAGAGTaGGTGAAGCTGCAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: HKISTSRGRFQASQCTSRICMSE*VKLQAD
Trigger: GTCGGCCTGCAGCTTCACCAACTCTGACATGCAGAT...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS-3UTR CAA 90 bp GGAGACCCGGGACCCTTTGAGAACATCCCAGACGTTGATAGTGTAATCATTGTACACACCATGGCTTTCTaGTCACATCCCCCAGACACG +
Preference number: 5 (lower is better)
Translates to: GDPGPFENIPDVDSVIIVHTMAF*SHPPDT
Trigger: CGTGTCTGGGGGATGTGACAAGAAAGCCATGGTGTG...TACAATGATTACACTATCAACGTCTGGGATGTTCTCAAAGGGTCCCGGGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR CAA 90 bp CACAGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTGCATGTCAGAGTTGTATTATCCAAACCACTaGTTTGTGGTGAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: HRAHVPSPLAVRICMSELYYPNH*FVVKES
Trigger: GGATTCCTTCACCACAAACAAGTGGTTTGGATAATA...CAACTCTGACATGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561313.5
CDS-3UTR CAA 90 bp TGCATGCCCAAGCCAGACTTGCAAGGGGATCAGACTGCATCACAGGGTAGCTCTCAGTTGCACATGTGGTaGCAAGTTTTCCATGCTTTG +
Preference number: 5 (lower is better)
Translates to: CMPKPDLQGDQTASQGSSQLHMW*QVFHAL
Trigger: CAAAGCATGGAAAACTTGCAACCACATGTGCAACTG...AGAGCTACCCTGTGATGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS TCA 90 bp GTAGTACCTGCAGAGAGAAAGTACTTTATCTACGGTTGTGACTCCTaGCCCTGGATGCCCATCAGAACCATGCTAGGCCCTTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: VVPAERKYFIYGCDS*PWMPIRTMLGPWNQ
Trigger: CTGATTCCAAGGGCCTAGCATGGTTCTGATGGGCATCCAGGGTCAGGAGTCACAACCGTAGATAAAGTACTTTCTCTCTGCAGGTACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557936.5
CDS TCA 90 bp GAAACAGAGATGACAAAGATCAGGGCGCCAGCCATCCCTCCACTCTaGATTCTGTTCTGCACCACGCTGAGTCACCAGAAAGCTATCTAT +
Preference number: 5 (lower is better)
Translates to: ETEMTKIRAPAIPPL*ILFCTTLSHQKAIY
Trigger: ATAGATAGCTTTCTGGTGACTCAGCGTGGTGCAGAACAGAATTCAGAGTGGAGGGATGGCTGGCGCCCTGATCTTTGTCATCTCTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558122.1
CDS-3UTR CAA 90 bp TATGATGCTTTCTTTGGAATAGATGGCAACCTCCCTATCTGCCCGCAGGTCATAATCTGCATGTCAGAGTaGGTGAAGCTGCAGGCCGAC +
Preference number: 5 (lower is better)
Translates to: YDAFFGIDGNLPICPQVIICMSE*VKLQAD
Trigger: GTCGGCCTGCAGCTTCACCAACTCTGACATGCAGAT...TATGACCTGCGGGCAGATAGGGAGGTTGCCATCTATTCCAAAGAAAGCATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS-3UTR CAA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGACACACCATGGCTTTCTaGTCACATCCCCCAGACACG +
Preference number: 5 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRHTMAF*SHPPDT
Trigger: CGTGTCTGGGGGATGTGACAAGAAAGCCATGGTGTG...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGTGGGGGCCCATCTGTTaGGCCCCTTCACCACAATTG +
Preference number: 5 (lower is better)
Translates to: EEGSRHHSAHREISDFKVWGPIC*APSPQL
Trigger: CAATTGTGGTGAAGGGGCCAAACAGATGGGCCCCCA...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCCGCGCCCAGTCACCTTaGTTTTTCTTTACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIRAQSP*FFFTSW
Trigger: CCAGGAGGTAAAGAAAAACAAAGGTGACTGGGCGCG...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp GTCCCATCGGGGGAAACTCGTAGAGTGCTAACGCGGTTTTCATGTCCAAACAGGCCTCATCGGACACTGTaGATGTCAGATTCATGTGTT +
Preference number: 5 (lower is better)
Translates to: VPSGETRRVLTRFSCPNRPHRTL*MSDSCV
Trigger: AACACATGAATCTGACATCAACAGTGTCCGATGAGG...CCTGTTTGGACATGAAAACCGCGTTAGCACTCTACGAGTTTCCCCCGATGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS GCA 90 bp TGCTCTCTTCCTTCCGTCCCGCTACCCCCATGGGAATTCTTCCGCTaGATTCCATTTAGTGAGGGTAAAATTAAGAAACAGCCACAGCAT +
Preference number: 5 (lower is better)
Translates to: CSLPSVPLPPWEFFR*IPFSEGKIKKQPQH
Trigger: ATGCTGTGGCTGTTTCTTAATTTTACCCTCACTAAATGGAATGCAGCGGAAGAATTCCCATGGGGGTAGCGGGACGGAAGGAAGAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558122.1
CDS-3UTR CAA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCCTCCAGCTTGCCCTaGAGGCTCTCGGCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNSSSLP*RLSASL
Trigger: GAGCGAGGCCGAGAGCCTCAAGGGCAAGCTGGAGGA...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCATCCTCCTCTTATCTTaGCACCAGTCCATGCACAGG +
Preference number: 5 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIILLLS*HQSMHR
Trigger: CCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGAT...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGCACACCATGGCTTTCTaGTCACATCCCCCAGACACG +
Preference number: 5 (lower is better)
Translates to: EEGSRHHSAHREISDFKVHTMAF*SHPPDT
Trigger: CGTGTCTGGGGGATGTGACAAGAAAGCCATGGTGTG...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp GTATCTCATCAGCAAATCCCGACAGCACCCACTGCGAGAGCGCATGCTCACAGCGACAGACATTTCCTGTaGTCACAGTCTTTACATAAA +
Preference number: 5 (lower is better)
Translates to: VSHQQIPTAPTARAHAHSDRHFL*SQSLHK
Trigger: TTTATGTAAAGACTGTGACAACAGGAAATGTCTGTC...GCTGTGAGCATGCGCTCTCGCAGTGGGTGCTGTCGGGATTTGCTGATGAGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp CTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTTCCTGTCTCTGCAACTaGGAAGCTGTGCAGCTATGG +
Preference number: 5 (lower is better)
Translates to: LPEEGSRHHSAHREISDFSCLCN*EAVQLW
Trigger: CCATAGCTGCACAGCTTCCAAGTTGCAGAGACAGGA...AAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp TTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTTGCAGGGATACATGGAGAGAAGAACAATGCCTCACCTaGTTTGTGGTGAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: FLGFPSVEATACRDTWREEQCLT*FVVKES
Trigger: GGATTCCTTCACCACAAACAAGGTGAGGCATTGTTC...TTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CAA 90 bp ATGCCAATGCAATGCAGGTGTTCCAGCATACCTGCACATAGGTTTTGGTCTTATATGCCCAAGCCAGACTaGCAAGGGGATCAGACTGCA +
Preference number: 5 (lower is better)
Translates to: MPMQCRCSSIPAHRFWSYMPKPD*QGDQTA
Trigger: TGCAGTCTGATCCCCTTGCAAGTCTGGCTTGGGCAT...ATAAGACCAAAACCTATGTGCAGGTATGCTGGAACACCTGCATTGCATTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CAA 90 bp CATCTTCCCCACCCTCCACGTGTTCATTCCCACAGGGCTATGGAGTCTGGTCAAAAATTTAAATCTAAGTaGAGCTGTGCATGCCCAAGC +
Preference number: 5 (lower is better)
Translates to: HLPHPPRVHSHRAMESGQKFKSK*SCACPS
Trigger: GCTTGGGCATGCACAGCTCAACTTAGATTTAAATTT...TTGACCAGACTCCATAGCCCTGTGGGAATGAACACGTGGAGGGTGGGGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CAA 90 bp TATGATGCTTTCTTTGGAATAGATGGCAACCTCCCTATCTGCCCGCAGGTCATAGCAAATGACTTCCTCTaGCCCAGCCTCAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: YDAFFGIDGNLPICPQVIANDFL*PSLSFL
Trigger: GAGGAAACTGAGGCTGGGCAAGAGGAAGTCATTTGC...TATGACCTGCGGGCAGATAGGGAGGTTGCCATCTATTCCAAAGAAAGCATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558519.5
CDS TCA 90 bp AAGGCTGGGGAGAAAATGCCTGAGAGCATTGTGGAAGTGAATTTCTaGCACTTCATTGCCTTGAAGGACAGCATTAGGTGGGTACACAGC +
Preference number: 5 (lower is better)
Translates to: KAGEKMPESIVEVNF*HFIALKDSIRWVHS
Trigger: GCTGTGTACCCACCTAATGCTGTCCTTCAAGGCAATGAAGTGTCAGAAATTCACTTCCACAATGCTCTCAGGCATTTTCTCCCCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560085.1
CDS-3UTR CAA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAATCCTCCTCTTATCTTaGCACCAGTCCATGCACAGG +
Preference number: 5 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRILLLS*HQSMHR
Trigger: CCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGAT...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCATTTCTTTCACTGGGGTaGGCCCTGTGGCAGCCCACG +
Preference number: 5 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSFLSLG*ALWQPT
Trigger: CGTGGGCTGCCACAGGGCCAACCCCAGTGAAAGAAA...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATATTAGCGAGCCTGTCTTaGTTATTTAGGTTGACAGGA +
Preference number: 5 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAILASLS*LFRLTG
Trigger: TCCTGTCAACCTAAATAACAAAGACAGGCTCGCTAA...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp ATCTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGATCCACTGTGGAACATaGGGGCTGTTTCAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: ICKIQSIPWSLPLSLHMLIHCGT*GLFQLW
Trigger: CCAAAGCTGAAACAGCCCCAATGTTCCACAGTGGAT...CAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGATCCTCCTCTTATCTTaGCACCAGTCCATGCACAGG +
Preference number: 5 (lower is better)
Translates to: EEGSRHHSAHREISDFKVILLLS*HQSMHR
Trigger: CCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGAT...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAATGGCCTGGCTGATTTaGGACCGAGTGGCCCATCAC +
Preference number: 5 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSMAWLI*DRVAHH
Trigger: GTGATGGGCCACTCGGTCCAAAATCAGCCAGGCCAT...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp ATGCCAATGCAATGCAGGTGTTCCAGCATACCTGCACATAGGTTTTGGTCTTATGCTCTAATTGTCCTCTaGGGGCGAGAGGGGAATAAA +
Preference number: 5 (lower is better)
Translates to: MPMQCRCSSIPAHRFWSYALIVL*GREGNK
Trigger: TTTATTCCCCTCTCGCCCCAAGAGGACAATTAGAGC...ATAAGACCAAAACCTATGTGCAGGTATGCTGGAACACCTGCATTGCATTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CAA 90 bp TTTCCATGCTTTGCCCATTTCCATGTTGGTATTGGCAGCCCCTATGGTGGCTCTAGAGAATGGAGAATTTaGGTGCCTCTTATCACTCAG +
Preference number: 5 (lower is better)
Translates to: FPCFAHFHVGIGSPYGGSREWRI*VPLITQ
Trigger: CTGAGTGATAAGAGGCACCAAAATTCTCCATTCTCT...AGAGCCACCATAGGGGCTGCCAATACCAACATGGAAATGGGCAAAGCATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS TCA 90 bp GTGGCAGGTCAGATAACCTTAGCTTTGCTTGGTTGCAAGTATTTCTaGTGTTCGCTTGGGGAGTTGACATCACCAGTAGACAAGGATCAA +
Preference number: 5 (lower is better)
Translates to: VAGQITLALLGCKYF*CSLGELTSPVDKDQ
Trigger: TTGATCCTTGTCTACTGGTGATGTCAACTCCCCAAGCGAACATCAGAAATACTTGCAACCAAGCAAAGCTAAGGTTATCTGACCTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS GCA 90 bp GTCTTTGACGCTCTCTCATCCACTAGACCGCCACATTTTGAAAAATaGCTTCACAAATGTTCATGCCTTGAACTTCCTCTGTTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: VFDALSSTRPPHFEK*LHKCSCLELPLFGP
Trigger: AGGGCCAAACAGAGGAAGTTCAAGGCATGAACATTTGTGAAGGCATTTTTCAAAATGTGGCGGTCTAGTGGATGAGAGAGCGTCAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558122.1
CDS-3UTR CAA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAACAGTAGCTGAGTTGTaGAGACTTCTTGAAAACTGG +
Preference number: 5 (lower is better)
Translates to: HKISTSRGRFQASQCTSRTVAEL*RLLENW
Trigger: CCAGTTTTCAAGAAGTCTCAACAACTCAGCTACTGT...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAGTGACCGCGTGCTCCTaGTTTGTGGTGAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSVTACS*FVVKES
Trigger: GGATTCCTTCACCACAAACAAGGAGCACGCGGTCAC...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp TCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCATGCTCTCAGAAGCATTaGTTTACAAACACCATTGGC +
Preference number: 5 (lower is better)
Translates to: SALPEEGSRHHSAHREISCSQKH*FTNTIG
Trigger: GCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCA...TGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp AGACGCTTAGTGACCTGTGAGCCATGGGTTGCTCCCCTAAGCTACACTGCAATAAATAAGTTTACTATCTaGTGTTCCCACACAGAAGAC +
Preference number: 5 (lower is better)
Translates to: RRLVTCEPWVAPLSYTAINKFTI*CSHTED
Trigger: GTCTTCTGTGTGGGAACACAAGATAGTAAACTTATT...TATTGCAGTGTAGCTTAGGGGAGCAACCCATGGCTCACAGGTCACTAAGCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp CTGCAAAATACAATCTATCCCATGGAGCTTACCCCTGAGTCTCCACATGCTGTCTTCACCACAATTGGTTaGGTAGGTTTATCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: LQNTIYPMELTPESPHAVFTTIG*VGLSPS
Trigger: ACTTGGGGATAAACCTACCAAACCAATTGTGGTGAA...GACAGCATGTGGAGACTCAGGGGTAAGCTCCATGGGATAGATTGTATTTTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp AGAGAAAACGCCCTGTCCAAGTGGCACAGTGACATCATCATCATCCATGAGTCATCTAAAGCACTGGACTaGGCTTCATGTCACAGATAT +
Preference number: 5 (lower is better)
Translates to: RENALSKWHSDIIIIHESSKALD*ASCHRY
Trigger: ATATCTGTGACATGAAGCCAAGTCCAGTGCTTTAGA...TGACTCATGGATGATGATGATGTCACTGTGCCACTTGGACAGGGCGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp TTGGGAAATGAAGATCTACAAATCCCCACTCAATCAGCTCTTCCAGGCTTGGGACTAAGACCAAAAAGTTaGAGAACCACTAGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: LGNEDLQIPTQSALPGLGLRPKS*RTTSPD
Trigger: GTCTGGGCTAGTGGTTCTCAAACTTTTTGGTCTTAG...TCCCAAGCCTGGAAGAGCTGATTGAGTGGGGATTTGTAGATCTTCATTTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGACCACGCTTTCTTTCTTaGTATTCCATTCTGTGGATG +
Preference number: 5 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRPRFLS*YSILWM
Trigger: CATCCACAGAATGGAATACAAAGAAAGAAAGCGTGG...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp ATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCGCACACAGTAAAAGGTaGTCACTCCACAGAAACTTT +
Preference number: 5 (lower is better)
Translates to: ISTSRGRFQASQCTSRNIAHSKR*SLHRNF
Trigger: AAAGTTTCTGTGGAGTGACAACCTTTTACTGTGTGC...GATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCCATGCACAGGACTTaGTTCCCGTGGCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNSMHRT*FPWPLR
Trigger: CCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGA...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp CACAATACTCTTTATTGTAAATGCCAATGCAATGCAGGTGTTCCAGCATACCTGATCCTCCTCTTATCTTaGCACCAGTCCATGCACAGG +
Preference number: 5 (lower is better)
Translates to: HNTLYCKCQCNAGVPAYLILLLS*HQSMHR
Trigger: CCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGAT...CAGGTATGCTGGAACACCTGCATTGCATTGGCATTTACAATAAAGAGTATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS-3UTR CAA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAGTTTTAATAGTCATATaGGAGACGCTTAGTGACCTG +
Preference number: 5 (lower is better)
Translates to: HKISTSRGRFQASQCTSRVLIVI*ETLSDL
Trigger: CAGGTCACTAAGCGTCTCCAATATGACTATTAAAAC...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp TCCATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAAGAAAAATACTGTACTaGAAGGTATTCTCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SIKSALPEEGSRHHSAHRRKILY*KVFSQC
Trigger: GCACTGCGAGAATACCTTCAAGTACAGTATTTTTCT...TCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp CATAAAATCAGCACTTCCAGAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAATGAGAATTACTAATTaGCTATATGAGTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: HKISTSRGRFQASQCTSRMRITN*LYEWGL
Trigger: CAGCCCCCACTCATATAGCAAATTAGTAATTCTCAT...TCTCGATGTGCACTGTGATGCCTGGAACCTTCCTCTGGAAGTGCTGATTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGATCTCAGCAGGCAAGTTaGGGAAATGAAGATCTACAA +
Preference number: 5 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRSQQAS*GNEDLQ
Trigger: TTGTAGATCTTCATTTCCCAAACTTGCCTGCTGAGA...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp ACAATACTCTTTATTGTAAATGCCAATGCAATGCAGGTGTTCCAGCATACCTGCTTGCCCATTTCCATGTaGGTATTGGCAGCCCCTATG +
Preference number: 5 (lower is better)
Translates to: TILFIVNANAMQVFQHTCLPISM*VLAAPM
Trigger: CATAGGGGCTGCCAATACCAACATGGAAATGGGCAA...GCAGGTATGCTGGAACACCTGCATTGCATTGGCATTTACAATAAAGAGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS CCA 90 bp GATAACCTTAGCTTTGCTTGGTTGCAAGTATTTCTGATGTTCGCTTaGGGAGTTGACATCACCAGTAGACAAGGATCAATGACAACAGCA +
Preference number: 5 (lower is better)
Translates to: DNLSFAWLQVFLMFA*GVDITSRQGSMTTA
Trigger: TGCTGTTGTCATTGATCCTTGTCTACTGGTGATGTCAACTCCCCAAGCGAACATCAGAAATACTTGCAACCAAGCAAAGCTAAGGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS-3UTR CAA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATATGGTCTCAGAGCTCGTaGTTTGAAACATTTGTCACA +
Preference number: 5 (lower is better)
Translates to: FGIGICFYHRPVTSPQSIWSQSS*FETFVT
Trigger: TGTGACAAATGTTTCAAACAACGAGCTCTGAGACCA...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp CTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAAATCAGCACTTCCAGAATTTGGAATTGGAATTaGCTTCTATCACAGACCAGT +
Preference number: 5 (lower is better)
Translates to: LLSQTSHQSSVHKISTSRIWNWN*LLSQTS
Trigger: ACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAAT...TCTGGAAGTGCTGATTTTATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATATGCTCTCAGAAGCATTaGTTTACAAACACCATTGGC +
Preference number: 5 (lower is better)
Translates to: FGIGICFYHRPVTSPQSICSQKH*FTNTIG
Trigger: GCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCA...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATCTCGCTGTCAGGATCTaGTTTGTGGTGAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNLAVRI*FVVKES
Trigger: GGATTCCTTCACCACAAACAAGATCCTGACAGCGAG...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396335.8
CDS-3UTR CAA 90 bp GAGGAAGGTTCCAGGCATCACAGTGCACATCGAGAAATATCAGACTTTAAAGTGATTTGGAATTGGAATTaGCTTCTATCACAGACCAGT +
Preference number: 5 (lower is better)
Translates to: EEGSRHHSAHREISDFKVIWNWN*LLSQTS
Trigger: ACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAAT...CACTTTAAAGTCTGATATTTCTCGATGTGCACTGTGATGCCTGGAACCTTCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
CDS-3UTR CAA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAACAGAAGACTTTTCTTaGCTCTCAGAAGCATTTGTT +
Preference number: 5 (lower is better)
Translates to: FGIGICFYHRPVTSPQSITEDFS*LSEAFV
Trigger: AACAAATGCTTCTGAGAGCAAAGAAAAGTCTTCTGT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp TTTGGAATTGGAATTTGCTTCTATCACAGACCAGTCACCAGTCCTCAGTCCATAAATAAGTTTACTATCTaGTGTTCCCACACAGAAGAC +
Preference number: 5 (lower is better)
Translates to: FGIGICFYHRPVTSPQSINKFTI*CSHTED
Trigger: GTCTTCTGTGTGGGAACACAAGATAGTAAACTTATT...TATGGACTGAGGACTGGTGACTGGTCTGTGATAGAAGCAAATTCCAATTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS TCA 90 bp CTTGAAAACTGGTCTCAGAGCTCGTTGTTTGAAACATTTGTCACATaGGCCAAATACATTAACGAGAAAGGTCTGATCACACATCTTTTA +
Preference number: 5 (lower is better)
Translates to: LENWSQSSLFETFVT*AKYINEKGLITHLL
Trigger: TAAAAGATGTGTGATCAGACCTTTCTCGTTAATGTATTTGGCTCATGTGACAAATGTTTCAAACAACGAGCTCTGAGACCAGTTTTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000560075.1
CDS TCA 90 bp TTTCCTCATCTGAAAAGTGAGAGTAATAATGCATATTTTCTGCTGTaGAGATTACATAAGACAGTCCATGCAAAGAATCTGGCATGGTGC +
Preference number: 5 (lower is better)
Translates to: FPHLKSESNNAYFLL*RLHKTVHAKNLAWC
Trigger: GCACCATGCCAGATTCTTTGCATGGACTGTCTTATGTAATCTTCACAGCAGAAAATATGCATTATTACTCTCACTTTTCAGATGAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557936.5
CDS-3UTR CAA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATAGAAAAATACTGTACTaGAAGGTATTCTCGCAGTGC +
Preference number: 5 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNRKILY*KVFSQC
Trigger: GCACTGCGAGAATACCTTCAAGTACAGTATTTTTCT...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTGTTTACAAACACCATaGGCTTTCCCTTCAATTCAG +
Preference number: 5 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNCLQTP*AFPSIQ
Trigger: CTGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACA...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp CTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTCAACAGAAGACTTTTCTTaGCTCTCAGAAGCATTTGTT +
Preference number: 5 (lower is better)
Translates to: LCSQKHLFTNTIGFPFNSTEDFS*LSEAFV
Trigger: AACAAATGCTTCTGAGAGCAAAGAAAAGTCTTCTGT...TGAATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000396335.8
CDS-3UTR CAA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATAAGTGGCTTTTTGGATaGGAAAGTCACAGTCTACTT +
Preference number: 5 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNKWLFG*ESHSLL
Trigger: AAGTAGACTGTGACTTTCCAATCCAAAAAGCCACTT...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATGTTAATCTTTCACCATaGGTGTGCTGGTTAGATAAC +
Preference number: 5 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNVNLSP*VCWLDN
Trigger: GTTATCTAACCAGCACACCAATGGTGAAAGATTAAC...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp AATTCACCCTCTTACAGTCCAGTGGTTTTTAGTCTATTCACAGAATTGTGCAATCGTTGTTTGAAACATTaGTCACATGAGCCAAATACA +
Preference number: 5 (lower is better)
Translates to: NSPSYSPVVFSLFTELCNRCLKH*SHEPNT
Trigger: TGTATTTGGCTCATGTGACAAATGTTTCAAACAACG...ATTGCACAATTCTGTGAATAGACTAAAAACCACTGGACTGTAAGAGGGTGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS-3UTR CAA 90 bp TTTCTTTGCTCTCAGAAGCATTTGTTTACAAACACCATTGGCTTTCCCTTCAATTGCTGCTATGAACATTaGCATTCAAATTTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: FLCSQKHLFTNTIGFPFNCCYEH*HSNFCV
Trigger: CACACAGAAATTTGAATGCAAATGTTCATAGCAGCA...ATTGAAGGGAAAGCCAATGGTGTTTGTAAACAAATGCTTCTGAGAGCAAAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261837.12
CDS GCA 72 bp CGACGCCAGCGTCTCGTTCTCGTGCAGCCCCTCGGTTaGCATCTTCGCGCGGGGACGCAGCGGAGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: RRQRLVLVQPLG*HLRAGTQRRGK
Trigger: CTTCCCTCTCCGCTGCGTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCACGAGAACGAGACGCTGGCGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358784.11
ENST00000561313.5
CDS GCA 72 bp GCCTCGCTCTTCAGCGACGCCAGCGTCTCGTTCTCGTaGAGCCCCTCGGTTGCCATCTTCGCGCGGGGACGC +
Preference number: 6 (lower is better)
Translates to: ASLFSDASVSFS*SPSVAIFARGR
Trigger: GCGTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCACGAGAACGAGACGCTGGCGTCGCTGAAGAGCGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358784.11
ENST00000560116.1
ENST00000561313.5
CDS CAA 72 bp GCGACGCCAGCGTCTCGTTCTCGTGCAGCCCCTCGGTaGCCATCTTCGCGCGGGGACGCAGCGGAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: ATPASRSRAAPR*PSSRGDAAERE
Trigger: TTCCCTCTCCGCTGCGTCCCCGCGCGAAGATGGCAACCGAGGGGCTGCACGAGAACGAGACGCTGGCGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358784.11
ENST00000561313.5
CDS CCA 72 bp GCCAGGTCCAAGCAGAGGACGTCAGCCCCATGTCCGTaGAAGCTCTGCAGCAGCTGCCCGCTCTCCACGTCC +
Preference number: 6 (lower is better)
Translates to: ARSKQRTSAPCP*KLCSSCPLSTS
Trigger: GGACGTGGAGAGCGGGCAGCTGCTGCAGAGCTTCCACGGACATGGGGCTGACGTCCTCTGCTTGGACCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000558519.5
ENST00000559348.5
ENST00000559541.1
CDS GCA 72 bp AAGCAGAGGACGTCAGCCCCATGTCCGTGGAAGCTCTaGAGCAGCTGCCCGCTCTCCACGTCCCACAGGGCA +
Preference number: 6 (lower is better)
Translates to: KQRTSAPCPWKL*SSCPLSTSHRA
Trigger: TGCCCTGTGGGACGTGGAGAGCGGGCAGCTGCTGCAGAGCTTCCACGGACATGGGGCTGACGTCCTCTGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000558519.5
ENST00000559348.5
ENST00000559541.1
CDS GCA 72 bp TGGCCTTTGAGGGTCCTTCTGGTCTTCATGACAAACTaGCCCAGGGCCTCCACCCGCTCCGCCACCTGGTGC +
Preference number: 6 (lower is better)
Translates to: WPLRVLLVFMTN*PRASTRSATWC
Trigger: GCACCAGGTGGCGGAGCGGGTGGAGGCCCTGGGGCAGTTTGTCATGAAGACCAGAAGGACCCTCAAAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS GCA 72 bp AGGGCACATGTGCCATCGCCGCTCGCTGTCAGGATCTaGCCGCAGAAAAGGACAGGAAGTGGGTGGTTGTGG +
Preference number: 6 (lower is better)
Translates to: RAHVPSPLAVRI*PQKRTGSGWLW
Trigger: CCACAACCACCCACTTCCTGTCCTTTTCTGCGGGCAGATCCTGACAGCGAGCGGCGATGGCACATGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS CCA 72 bp GGGAGAAAGCACAGTCCCTGTCCCTGTTGGAGGATGTaGGGCACTGAGGGAGAAGTCCACGCTGGATGCTCC +
Preference number: 6 (lower is better)
Translates to: GRKHSPCPCWRM*GTEGEVHAGCS
Trigger: GGAGCATCCAGCGTGGACTTCTCCCTCAGTGCCCCACATCCTCCAACAGGGACAGGGACTGTGCTTTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS GCA 72 bp ACAAGCAATGGCACATCCCGATGGGGCATAAGCACATaGCATCACCCACGTGCAGGGCATGGTGACCGCGTG +
Preference number: 6 (lower is better)
Translates to: TSNGTSRWGIST*HHPRAGHGDRV
Trigger: CACGCGGTCACCATGCCCTGCACGTGGGTGATGGCATGTGCTTATGCCCCATCGGGATGTGCCATTGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000560075.1
CDS GCA 72 bp GCCTCGCTCTTCAGCGACGCCAGCGTCTCGTTCTCGTaGAGCCCCTCGGTTGCCATAATTTCTGCACATGTT +
Preference number: 6 (lower is better)
Translates to: ASLFSDASVSFS*SPSVAIISAHV
Trigger: AACATGTGCAGAAATTATGGCAACCGAGGGGCTGCACGAGAACGAGACGCTGGCGTCGCTGAAGAGCGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000560075.1
CDS CAA 90 bp ACACGGATAGGCCTTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTaGCAGGGATACATGGAGAGAAATCAGGACAGGGCCGGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: TRIGLLGVSIRRGNC*QGYMERNQDRAGQL
Trigger: CAGCTGCCCGGCCCTGTCCTGATTTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAAGGCCTATCCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS CCA 72 bp TTTCCATCCGTAGAGGCAACTGCTTGCAGGGATACATaGAGAGAAATCAGGACAGGGCCGGGCAGCTGGACC +
Preference number: 6 (lower is better)
Translates to: FPSVEATACRDT*REIRTGPGSWT
Trigger: GGTCCAGCTGCCCGGCCCTGTCCTGATTTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGATGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS CCA 72 bp GATTCAAAGGGGAGAAAGCACAGTCCCTGTCCCTGTTaGAGGATGTGGGGCACTGAGGGAGAAGTCCACGCT +
Preference number: 6 (lower is better)
Translates to: DSKGRKHSPCPC*RMWGTEGEVHA
Trigger: AGCGTGGACTTCTCCCTCAGTGCCCCACATCCTCCAACAGGGACAGGGACTGTGCTTTCTCCCCTTTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS CCA 72 bp AGCTCCAACTTACCCACAAGCAATGGCACATCCCGATaGGGCATAAGCACATGCCATCACCCACGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: SSNLPTSNGTSR*GISTCHHPRAG
Trigger: CCCTGCACGTGGGTGATGGCATGTGCTTATGCCCCATCGGGATGTGCCATTGCTTGTGGGTAAGTTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560075.1
CDS CCA 72 bp GCTGCTCCACAGGGCCTGGGTGAGGTGATAAGACCGTaGAGGAAGTGGCTCTTGCAGCATAAGTGTCCACAA +
Preference number: 6 (lower is better)
Translates to: AAPQGLGEVIRP*RKWLLQHKCPQ
Trigger: TTGTGGACACTTATGCTGCAAGAGCCACTTCCTCCACGGTCTTATCACCTCACCCAGGCCCTGTGGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CCA 72 bp TACACAGCCTTCATTTCCCCCTGGAGTGAAGTTGCCTaGGGCAGGACAAAGTGGGAGGTCAGAAGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: YTAFISPWSEVA*GRTKWEVRSSE
Trigger: CTCTGAGCTTCTGACCTCCCACTTTGTCCTGCCCCAGGCAACTTCACTCCAGGGGGAAATGAAGGCTGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560085.1
CDS CAA 72 bp CACCAGTCCATGCACAGGACTTTGTTCCCGTGGCCTTaGAGGGTCCTTCTGGTCTTCATGACAAACTGCCCC +
Preference number: 6 (lower is better)
Translates to: HQSMHRTLFPWP*RVLLVFMTNCP
Trigger: GGGGCAGTTTGTCATGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGACTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS CAA 72 bp GGCCTTCTTGGGGTTTCCATCCGTAGAGGCAACTGCTaGCAGGGATACATGGAGAGAAATCAGGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: GLLGVSIRRGNC*QGYMERNQDRA
Trigger: GGCCCTGTCCTGATTTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS CAA 72 bp CTGGGTGAGGTGATAAGACCGTGGAGGAAGTGGCTCTaGCAGCATAAGTGTCCACAAGAGAGCCCTTTGCGG +
Preference number: 6 (lower is better)
Translates to: LGEVIRPWRKWL*QHKCPQESPLR
Trigger: CCGCAAAGGGCTCTCTTGTGGACACTTATGCTGCAAGAGCCACTTCCTCCACGGTCTTATCACCTCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CAA 90 bp TTATCTTTGCACCAGTCCATGCACAGGACTTTGTTCCCGTGGCCTTaGAGGGTCCTTCTGGTCTTCATGACAAACTGCCCCAGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LSLHQSMHRTLFPWP*RVLLVFMTNCPRAS
Trigger: GGAGGCCCTGGGGCAGTTTGTCATGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS TCA 72 bp CACACAGGAGGGTCCCAAACCCAGTGTGGTGATATCTaGGTTGGTCTTCAAGGAAGAGTGAGAGCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: HTGGSQTQCGDI*VGLQGRVRAGQ
Trigger: CTGGCCAGCTCTCACTCTTCCTTGAAGACCAACTCAGATATCACCACACTGGGTTTGGGACCCTCCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS GCA 72 bp CATCCTGTGACGAGCTCACGATCCTCCTCTTATCTTTaGACCAGTCCATGCACAGGACTTTGTTCCCGTGGC +
Preference number: 6 (lower is better)
Translates to: HPVTSSRSSSYL*TSPCTGLCSRG
Trigger: GCCACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGATCGTGAGCTCGTCACAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS GCA 72 bp ACACTGTTGATGTCAGATTCATGTGTTTCAAAGGCCTaGACGCACTGGCCGGAGCGCATGTCCCACACCATG +
Preference number: 6 (lower is better)
Translates to: TLLMSDSCVSKA*THWPERMSHTM
Trigger: CATGGTGTGGGACATGCGCTCCGGCCAGTGCGTGCAGGCCTTTGAAACACATGAATCTGACATCAACAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000558519.5
ENST00000559348.5
ENST00000559541.1
CDS CCA 72 bp ATTATCCAAACCACCACAAGCAATGGCACATCCCGATaGGGCATAAGCACATGCCATCACCCACGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: IIQTTTSNGTSR*GISTCHHPRAG
Trigger: CCCTGCACGTGGGTGATGGCATGTGCTTATGCCCCATCGGGATGTGCCATTGCTTGTGGTGGTTTGGATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000358784.11
CDS CCA 72 bp ATGTCAGATTCATGTGTTTCAAAGGCCTGCACGCACTaGCCGGAGCGCATGTCCCACACCATGGCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: MSDSCVSKACTH*PERMSHTMAFL
Trigger: CAAGAAAGCCATGGTGTGGGACATGCGCTCCGGCCAGTGCGTGCAGGCCTTTGAAACACATGAATCTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000558519.5
ENST00000559348.5
ENST00000559541.1
CDS CAA 72 bp CCATCCTGTGACGAGCTCACGATCCTCCTCTTATCTTaGCACCAGTCCATGCACAGGACTTTGTTCCCGTGG +
Preference number: 6 (lower is better)
Translates to: PSCDELTILLLS*HQSMHRTLFPW
Trigger: CCACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGATCGTGAGCTCGTCACAGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS CAA 90 bp ATCACCTTCCCATCCTGTGACGAGCTCACGATCCTCCTCTTATCTTaGCACCAGTCCATGCACAGGACTTTGTTCCCGTGGCCTTTGAGG +
Preference number: 6 (lower is better)
Translates to: ITFPSCDELTILLLS*HQSMHRTLFPWPLR
Trigger: CCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGATCGTGAGCTCGTCACAGGATGGGAAGGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS CAA 90 bp TCAGTAAGCAGTGATTCAGGCGCACTGAGTCCTAGGCACTGTGCTTaGCCTCAAGGATTCAAAGGGGAGAAAGCACAGTCCCTGTCCCTG +
Preference number: 6 (lower is better)
Translates to: SVSSDSGALSPRHCA*PQGFKGEKAQSLSL
Trigger: CAGGGACAGGGACTGTGCTTTCTCCCCTTTGAATCCTTGAGGCAAAGCACAGTGCCTAGGACTCAGTGCGCCTGAATCACTGCTTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS CAA 90 bp GCACATGTGCCATCGCCGCTCGCTGTCAGGATCAAGATTAACAGCTaGCTCATCCAGACTCAAAGACTGTTCGCTTGCTGGGCTCACCAA +
Preference number: 6 (lower is better)
Translates to: AHVPSPLAVRIKINS*LIQTQRLFACWAHQ
Trigger: TTGGTGAGCCCAGCAAGCGAACAGTCTTTGAGTCTGGATGAGCAAGCTGTTAATCTTGATCCTGACAGCGAGCGGCGATGGCACATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS TCA 72 bp TGCAGCATAAGTGTCCACAAGAGAGCCCTTTGCGGATaGTTACTGATGGCTACTGGTGCCCCCTTTCATCCC +
Preference number: 6 (lower is better)
Translates to: CSISVHKRALCG*LLMATGAPFHP
Trigger: GGGATGAAAGGGGGCACCAGTAGCCATCAGTAATCATCCGCAAAGGGCTCTCTTGTGGACACTTATGCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS TCA 72 bp ATGACAAAGATCAGGGCGCCAGCCATCCCTCCACTCTaGATTCTGTTCTGCACCACGCTGAGTCACCAGAAA +
Preference number: 6 (lower is better)
Translates to: MTKIRAPAIPPL*ILFCTTLSHQK
Trigger: TTTCTGGTGACTCAGCGTGGTGCAGAACAGAATTCAGAGTGGAGGGATGGCTGGCGCCCTGATCTTTGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558122.1
CDS GCA 72 bp AATGACAACAGCATGAGAAGTGCTGGGATCCAGGTGTaGACACAGGAGGGTCCCAAACCCAGTGTGGTGATA +
Preference number: 6 (lower is better)
Translates to: NDNSMRSAGIQV*TQEGPKPSVVI
Trigger: TATCACCACACTGGGTTTGGGACCCTCCTGTGTGCACACCTGGATCCCAGCACTTCTCATGCTGTTGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS GCA 72 bp CTTGCTGGGCTCACCAATCCAAAGCTAAAACGGCCTTaGAAGACCCACCTTAAAATCACCAAGCCTGGACCC +
Preference number: 6 (lower is better)
Translates to: LAGLTNPKLKRP*KTHLKITKPGP
Trigger: GGGTCCAGGCTTGGTGATTTTAAGGTGGGTCTTGCAAGGCCGTTTTAGCTTTGGATTGGTGAGCCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS GCA 72 bp CATCGCCGCTCGCTGTCAGGATCAAGATTAACAGCTTaGTCATCCAGACTCAAAGACTGTTCGCTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: HRRSLSGSRLTA*SSRLKDCSLAG
Trigger: CCCAGCAAGCGAACAGTCTTTGAGTCTGGATGAGCAAGCTGTTAATCTTGATCCTGACAGCGAGCGGCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CCA 72 bp CAGGTGGGGACTCAGTCTGAAGCCAAGAGAGCACTCTaGAAGCTTCTGGGCAGGAGAATGAGAAAAGCAAAC +
Preference number: 6 (lower is better)
Translates to: QVGTQSEAKRAL*KLLGRRMRKAN
Trigger: GTTTGCTTTTCTCATTCTCCTGCCCAGAAGCTTCCAGAGTGCTCTCTTGGCTTCAGACTGAGTCCCCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CAA 72 bp CTCCTCTTATCTTTGCACCAGTCCATGCACAGGACTTaGTTCCCGTGGCCTTTGAGGGTCCTTCTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: LLLSLHQSMHRT*FPWPLRVLLVF
Trigger: GAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAGATAAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS CAA 72 bp AGTGATTCAGGCGCACTGAGTCCTAGGCACTGTGCTTaGCCTCAAGGATTCAAAGGGGAGAAAGCACAGTCC +
Preference number: 6 (lower is better)
Translates to: SDSGALSPRHCA*PQGFKGEKAQS
Trigger: GGACTGTGCTTTCTCCCCTTTGAATCCTTGAGGCAAAGCACAGTGCCTAGGACTCAGTGCGCCTGAATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS CAA 72 bp TGGCTCTTGCAGCATAAGTGTCCACAAGAGAGCCCTTaGCGGATGATTACTGATGGCTACTGGTGCCCCCTT +
Preference number: 6 (lower is better)
Translates to: WLLQHKCPQESP*RMITDGYWCPL
Trigger: AAGGGGGCACCAGTAGCCATCAGTAATCATCCGCAAAGGGCTCTCTTGTGGACACTTATGCTGCAAGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CAA 72 bp CCATCGCCGCTCGCTGTCAGGATCAAGATTAACAGCTaGCTCATCCAGACTCAAAGACTGTTCGCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: PSPLAVRIKINS*LIQTQRLFACW
Trigger: CCAGCAAGCGAACAGTCTTTGAGTCTGGATGAGCAAGCTGTTAATCTTGATCCTGACAGCGAGCGGCGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CAA 90 bp CTCACGATCCTCCTCTTATCTTTGCACCAGTCCATGCACAGGACTTaGTTCCCGTGGCCTTTGAGGGTCCTTCTGGTCTTCATGACAAAC +
Preference number: 6 (lower is better)
Translates to: LTILLLSLHQSMHRT*FPWPLRVLLVFMTN
Trigger: GTTTGTCATGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAGATAAGAGGAGGATCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS TCA 72 bp AGCTGGACCAGAGCACCTTTAAGTAGGCTGGGATTCTaGAGCCTCTATAACGTGGCTGGGAACAATGCCTCA +
Preference number: 6 (lower is better)
Translates to: SWTRAPLSRLGF*SLYNVAGNNAS
Trigger: TGAGGCATTGTTCCCAGCCACGTTATAGAGGCTTCAGAATCCCAGCCTACTTAAAGGTGCTCTGGTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS GCA 72 bp ATAGGCCTTCTTGGGGTTTCCATCCGTAGAGGCAACTaGTTGCAGGGATACATGGAGAGAAATCAGGACAGG +
Preference number: 6 (lower is better)
Translates to: IGLLGVSIRRGN*LQGYMERNQDR
Trigger: CCTGTCCTGATTTCTCTCCATGTATCCCTGCAAGCAGTTGCCTCTACGGATGGAAACCCCAAGAAGGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560116.1
CDS GCA 72 bp CTCCCAGGTGGCTGGGATTACAAGCAGGCACCACTGTaGTGGCTTATGGTTTCTTCTTTGATCAAGTTCAGG +
Preference number: 6 (lower is better)
Translates to: LPGGWDYKQAPL*WLMVSSLIKFR
Trigger: CCTGAACTTGATCAAAGAAGAAACCATAAGCCAGCACAGTGGTGCCTGCTTGTAATCCCAGCCACCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560075.1
CDS CCA 72 bp TCTTTGCACCAGTCCATGCACAGGACTTTGTTCCCGTaGCCTTTGAGGGTCCTTCTGGTCTTCATGACAAAC +
Preference number: 6 (lower is better)
Translates to: SLHQSMHRTLFP*PLRVLLVFMTN
Trigger: GTTTGTCATGAAGACCAGAAGGACCCTCAAAGGCCACGGGAACAAAGTCCTGTGCATGGACTGGTGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261837.12
ENST00000358784.11
ENST00000396335.8
ENST00000560075.1
ENST00000560116.1
ENST00000561313.5
CDS CAA 72 bp GCCTTCACAAATGTTCATGCCTTGAACTTCCTCTGTTaGGCCCTCGTAACAGCCAGTGAGGCAGCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: AFTNVHALNFLC*ALVTASEAARK
Trigger: TTTCCTGGCTGCCTCACTGGCTGTTACGAGGGCCAAACAGAGGAAGTTCAAGGCATGAACATTTGTGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558122.1
CDS TCA 72 bp GACTTGGCCCAGAGCTCAGGGATAAGAAAGTGGTTATaGGCACAGACACTGAATCAGACGCACAAAGCCACA +
Preference number: 6 (lower is better)
Translates to: DLAQSSGIRKWL*AQTLNQTHKAT
Trigger: TGTGGCTTTGTGCGTCTGATTCAGTGTCTGTGCTCATAACCACTTTCTTATCCCTGAGCTCTGGGCCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557936.5
CDS TCA 72 bp CTTGGGGAGTTGACATCACCAGTAGACAAGGATCAATaGCAACAGCATGAGAAGTGCTGGGATCCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: LGELTSPVDKDQ*QQHEKCWDPGV
Trigger: CACACCTGGATCCCAGCACTTCTCATGCTGTTGTCATTGATCCTTGTCTACTGGTGATGTCAACTCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS GCA 72 bp AGGATGTGGGGCACTGAGGGAGAAGTCCACGCTGGATaGTCCAAATATGATGCTTTCTTTGGAATAGATGGC +
Preference number: 6 (lower is better)
Translates to: RMWGTEGEVHAG*SKYDAFFGIDG
Trigger: GCCATCTATTCCAAAGAAAGCATCATATTTGGAGCATCCAGCGTGGACTTCTCCCTCAGTGCCCCACATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS CCA 72 bp ATTTTACTTTTTGTCACTGCCAGTGTGTATGAGGCCTaGGCTCTGGCTGAGCATACCTTCCTGGGATTGGGA +
Preference number: 6 (lower is better)
Translates to: ILLFVTASVYEA*ALAEHTFLGLG
Trigger: TCCCAATCCCAGGAAGGTATGCTCAGCCAGAGCCCAGGCCTCATACACACTGGCAGTGACAAAAAGTAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS GCA 72 bp CCTTCCGTCCCGCTACCCCCATGGGAATTCTTCCGCTaGATTCCATTTAGTGAGGGTAAAATTAAGAAACAG +
Preference number: 6 (lower is better)
Translates to: PSVPLPPWEFFR*IPFSEGKIKKQ
Trigger: CTGTTTCTTAATTTTACCCTCACTAAATGGAATGCAGCGGAAGAATTCCCATGGGGGTAGCGGGACGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558122.1
CDS CAA 90 bp GACGTTGATAGTGTAATCATTGTATCCAGCAAACAGCAGGCGACCTaGAAGCAGGGTGAGATGATAGCTGTTAAGCCAGTTCCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: DVDSVIIVSSKQQAT*KQGEMIAVKPVPCF
Trigger: GAAGCAAGGAACTGGCTTAACAGCTATCATCTCACCCTGCTTCAAGGTCGCCTGCTGTTTGCTGGATACAATGATTACACTATCAACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559541.1
CDS TCA 72 bp CCAAGAGAGCACTCTGGAAGCTTCTGGGCAGGAGAATaGGAAAAGCAAACGTATGTTTTAGGAAACTCTGGC +
Preference number: 6 (lower is better)
Translates to: PREHSGSFWAGE*EKQTYVLGNSG
Trigger: GCCAGAGTTTCCTAAAACATACGTTTGCTTTTCTCATTCTCCTGCCCAGAAGCTTCCAGAGTGCTCTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CCA 72 bp ATGTCTGCACTGACCATTTACTACCTGCGATACTTTTaGCAAATGACTTCCTCTTGCCCAGCCTCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: MSALTIYYLRYF*QMTSSCPASVS
Trigger: GGAAACTGAGGCTGGGCAAGAGGAAGTCATTTGCCAAAAGTATCGCAGGTAGTAAATGGTCAGTGCAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557936.5
CDS TCA 72 bp GTGCAGCCCCTCGGTTGCCATAATTTCTGCACATGTTaGACAGTAGCTGAGTTGTTGAGACTTCTTGAAAAC +
Preference number: 6 (lower is better)
Translates to: VQPLGCHNFCTC*TVAELLRLLEN
Trigger: GTTTTCAAGAAGTCTCAACAACTCAGCTACTGTTCAACATGTGCAGAAATTATGGCAACCGAGGGGCTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000560075.1
CDS GCA 72 bp ACACTGAATCAGACGCACAAAGCCACATTGGATGTCTaGACTGACCATTTACTACCTGCGATACTTTTGGCA +
Preference number: 6 (lower is better)
Translates to: TLNQTHKATLDV*TDHLLPAILLA
Trigger: TGCCAAAAGTATCGCAGGTAGTAAATGGTCAGTGCAGACATCCAATGTGGCTTTGTGCGTCTGATTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557936.5
CDS CCA 72 bp AAGGAACTGAGCGATGATGGAGCGCTAGTTTCATTCTaGTCCTGTCTTACAGTCCTGGGAAAAGTTTCTGAA +
Preference number: 6 (lower is better)
Translates to: KELSDDGALVSF*SCLTVLGKVSE
Trigger: TTCAGAAACTTTTCCCAGGACTGTAAGACAGGACCAGAATGAAACTAGCGCTCCATCATCGCTCAGTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560085.1
CDS CAA 72 bp TACTGTGGCAGGTCAGATAACCTTAGCTTTGCTTGGTaGCAAGTATTTCTGATGTTCGCTTGGGGAGTTGAC +
Preference number: 6 (lower is better)
Translates to: YCGRSDNLSFAW*QVFLMFAWGVD
Trigger: GTCAACTCCCCAAGCGAACATCAGAAATACTTGCAACCAAGCAAAGCTAAGGTTATCTGACCTGCCACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CAA 72 bp AACCACTGCGATAAGGAGTCAGTATTAGTTTCGTCTTaGACGCTCTCTCATCCACTAGACCGCCACATTTTG +
Preference number: 6 (lower is better)
Translates to: NHCDKESVLVSS*TLSHPLDRHIL
Trigger: CAAAATGTGGCGGTCTAGTGGATGAGAGAGCGTCAAAGACGAAACTAATACTGACTCCTTATCGCAGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558122.1
CDS TCA 72 bp GAGAAAATGCCTGAGAGCATTGTGGAAGTGAATTTCTaGCACTTCATTGCCTTGAAGGACAGCATTAGGTGG +
Preference number: 6 (lower is better)
Translates to: EKMPESIVEVNF*HFIALKDSIRW
Trigger: CCACCTAATGCTGTCCTTCAAGGCAATGAAGTGTCAGAAATTCACTTCCACAATGCTCTCAGGCATTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560085.1
CDS TCA 72 bp CAGATAACCTTAGCTTTGCTTGGTTGCAAGTATTTCTaGTGTTCGCTTGGGGAGTTGACATCACCAGTAGAC +
Preference number: 6 (lower is better)
Translates to: QITLALLGCKYF*CSLGELTSPVD
Trigger: GTCTACTGGTGATGTCAACTCCCCAAGCGAACATCAGAAATACTTGCAACCAAGCAAAGCTAAGGTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CCA 72 bp AGCTTTGCTTGGTTGCAAGTATTTCTGATGTTCGCTTaGGGAGTTGACATCACCAGTAGACAAGGATCAATG +
Preference number: 6 (lower is better)
Translates to: SFAWLQVFLMFA*GVDITSRQGSM
Trigger: CATTGATCCTTGTCTACTGGTGATGTCAACTCCCCAAGCGAACATCAGAAATACTTGCAACCAAGCAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CCA 72 bp AGAATGAGAAAAGCAAACGTATGTTTTAGGAAACTCTaGCAGAGGCCCAAAGAGCCTCTGGATAGCTTACAA +
Preference number: 6 (lower is better)
Translates to: RMRKANVCFRKL*QRPKEPLDSLQ
Trigger: TTGTAAGCTATCCAGAGGCTCTTTGGGCCTCTGCCAGAGTTTCCTAAAACATACGTTTGCTTTTCTCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559348.5
CDS CAA 90 bp TTAGTTTCGTCTTTGACGCTCTCTCATCCACTAGACCGCCACATTTaGAAAAATGCCTTCACAAATGTTCATGCCTTGAACTTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: LVSSLTLSHPLDRHI*KNAFTNVHALNFLC
Trigger: ACAGAGGAAGTTCAAGGCATGAACATTTGTGAAGGCATTTTTCAAAATGTGGCGGTCTAGTGGATGAGAGAGCGTCAAAGACGAAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558122.1
CDS TCA 72 bp TGGTCTCAGAGCTCGTTGTTTGAAACATTTGTCACATaGGCCAAATACATTAACGAGAAAGGTCTGATCACA +
Preference number: 6 (lower is better)
Translates to: WSQSSLFETFVT*AKYINEKGLIT
Trigger: TGTGATCAGACCTTTCTCGTTAATGTATTTGGCTCATGTGACAAATGTTTCAAACAACGAGCTCTGAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000560075.1
CDS GCA 72 bp AACAGTATTCTATGGTTAACACAAATTCTGAAAAGCTaGTGTAGCTCCAACTTACCCACAAGCAATGGCACA +
Preference number: 6 (lower is better)
Translates to: NSILWLTQILKS*CSSNLPTSNGT
Trigger: TGTGCCATTGCTTGTGGGTAAGTTGGAGCTACAGCAGCTTTTCAGAATTTGTGTTAACCATAGAATACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560075.1
CDS CAA 72 bp TTGAAAACTGGTCTCAGAGCTCGTTGTTTGAAACATTaGTCACATGAGCCAAATACATTAACGAGAAAGGTC +
Preference number: 6 (lower is better)
Translates to: LKTGLRARCLKH*SHEPNTLTRKV
Trigger: GACCTTTCTCGTTAATGTATTTGGCTCATGTGACAAATGTTTCAAACAACGAGCTCTGAGACCAGTTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261837.12
ENST00000560075.1
CDS TCA 72 bp CTGAAAAGTGAGAGTAATAATGCATATTTTCTGCTGTaGAGATTACATAAGACAGTCCATGCAAAGAATCTG +
Preference number: 6 (lower is better)
Translates to: LKSESNNAYFLL*RLHKTVHAKNL
Trigger: CAGATTCTTTGCATGGACTGTCTTATGTAATCTTCACAGCAGAAAATATGCATTATTACTCTCACTTTTCAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557936.5