RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNB1L (Homo sapiens)

Ensembl gene IDs: ENSG00000185838

Ensembl transcript IDs: ENST00000329517.11, ENST00000403325.5, ENST00000405009.5, ENST00000453108.1, ENST00000460402.5, ENST00000481086.1

Found 705 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCACAGCACGTCAACATGGAGCGCCCAGCAGCGGCGGCGGGTCCTaGGCTGTGCTCCGGAGCCCTTCCCGGGATCATCTCCCGGCATCG +
Preference number: 1 (lower is better)
Translates to: RTARQHGAPSSGGGS*AVLRSPSRDHLPAS
Trigger: CGATGCCGGGAGATGATCCCGGGAAGGGCTCCGGAGCACAGCCCAGGACCCGCCGCCGCTGCTGGGCGCTCCATGTTGACGTGCTGTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CTGCCCAGCACTCACCTGGAGGTGCACCCTGTGCGCCTTCCCCACTaGACCCTCTGCGGGCAGGCGTGCCCTCCCGGATCCCACATCTGG +
Preference number: 1 (lower is better)
Translates to: LPSTHLEVHPVRLPH*TLCGQACPPGSHIW
Trigger: CCAGATGTGGGATCCGGGAGGGCACGCCTGCCCGCAGAGGGTGCAGTGGGGAAGGCGCACAGGGTGCACCTCCAGGTGAGTGCTGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GCCTCACCAGGCAGACGTGCCAGGACCCGCGTCCCTGCACACAGCTaGCCACCGGCCAGTGGAGTGGGACCTGCTGCCCCTCTGACAGCT +
Preference number: 1 (lower is better)
Translates to: ASPGRRARTRVPAHS*PPASGVGPAAPLTA
Trigger: AGCTGTCAGAGGGGCAGCAGGTCCCACTCCACTGGCCGGTGGGCAGCTGTGTGCAGGGACGCGGGTCCTGGCACGTCTGCCTGGTGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp AGAGGGGCCCACTCCACCTGCACCGGAGGCAGCGGCTGGGGATGCTaGAGCATACGGCTCCAGCCACTCAGGATCCCACTCTGGGCCGTG +
Preference number: 1 (lower is better)
Translates to: RGAHSTCTGGSGWGC*SIRLQPLRIPLWAV
Trigger: CACGGCCCAGAGTGGGATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGTGCAGGTGGAGTGGGCCCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp CAGTGCTGTGGGACCTCCCCTGTAGGGCTGGCCAGCCTCATGGGCTaGGCTACCCGTCCCACTCAGCAGTGGCTGCCTGGCCTCCCCTCT +
Preference number: 1 (lower is better)
Translates to: QCCGTSPVGLASLMG*ATRPTQQWLPGLPS
Trigger: AGAGGGGAGGCCAGGCAGCCACTGCTGAGTGGGACGGGTAGCCCAGCCCATGAGGCTGGCCAGCCCTACAGGGGAGGTCCCACAGCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CTCCCTTGCTGCTCTCGTGCCTTCTGCCCAGCACTCACCTGGAGGTaGACCCTGTGCGCCTTCCCCACTGCACCCTCTGCGGGCAGGCGT +
Preference number: 1 (lower is better)
Translates to: LPCCSRAFCPALTWR*TLCAFPTAPSAGRR
Trigger: ACGCCTGCCCGCAGAGGGTGCAGTGGGGAAGGCGCACAGGGTGCACCTCCAGGTGAGTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CCAGCCATGCTGCCAGGAGTCGCCTCTCAGGTTCATCCCAGGAGCTaGATGCTGACCTTCGCGTGCTGCCTCCGGGCCACCCCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: PAMLPGVASQVHPRS*MLTFACCLRATPPP
Trigger: GGGAGGAGGGGTGGCCCGGAGGCAGCACGCGAAGGTCAGCATGCAGCTCCTGGGATGAACCTGAGAGGCGACTCCTGGCAGCATGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp ATCAGAGGGGCCCACTCCACCTGCACCGGAGGCAGCGGCTGGGGATaGTGGAGCATACGGCTCCAGCCACTCAGGATCCCACTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: IRGAHSTCTGGSGWG*WSIRLQPLRIPLWA
Trigger: GGCCCAGAGTGGGATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGTGCAGGTGGAGTGGGCCCCTCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp GCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGTGCTaGCCGAACCTACCTTGTAAAGTGGGGCTGCACAGAGGTCAGCAC +
Preference number: 1 (lower is better)
Translates to: AAQRWVSAARPRMGC*PNLPCKVGLHRGQH
Trigger: GTGCTGACCTCTGTGCAGCCCCACTTTACAAGGTAGGTTCGGCCAGCACCCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp CACACAGCTGCCCACCGGCCAGTGGAGTGGGACCTGCTGCCCCTCTaGCAGCTCCTGGTAATCAGAGGGGCCCACTCCACCTGCACCGGA +
Preference number: 1 (lower is better)
Translates to: HTAAHRPVEWDLLPL*QLLVIRGAHSTCTG
Trigger: TCCGGTGCAGGTGGAGTGGGCCCCTCTGATTACCAGGAGCTGTCAGAGGGGCAGCAGGTCCCACTCCACTGGCCGGTGGGCAGCTGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp GGCTGTGCTCCGGAGCCCTTCCCGGGATCATCTCCCGGCATCGGCTaGCCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCTGCAGGGA +
Preference number: 1 (lower is better)
Translates to: GCAPEPFPGSSPGIG*PLGVYVPSPICLQG
Trigger: TCCCTGCAGGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATGATCCCGGGAAGGGCTCCGGAGCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp TTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGTaGTGGCCGAACCTACCTTGTAAAGTGGGGCTGCACAGAGGTCAG +
Preference number: 1 (lower is better)
Translates to: LAAQRWVSAARPRMG*WPNLPCKVGLHRGQ
Trigger: CTGACCTCTGTGCAGCCCCACTTTACAAGGTAGGTTCGGCCAGCACCCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp TCGGTGTCTACGTGCCAAGCCCAATCTGCCTGCAGGGACACCCACTaGCAGAGGCGGAGGCAGGTTCTCCTGGTCCCAGACCCAGGGCCG +
Preference number: 1 (lower is better)
Translates to: SVSTCQAQSACRDTH*QRRRQVLLVPDPGP
Trigger: CGGCCCTGGGTCTGGGACCAGGAGAACCTGCCTCCGCCTCTGGCAGTGGGTGTCCCTGCAGGCAGATTGGGCTTGGCACGTAGACACCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp TCCCGGGATCATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTaGCAAGCCCAATCTGCCTGCAGGGACACCCACTGCCAGAGGCGG +
Preference number: 1 (lower is better)
Translates to: SRDHLPASADPSVST*QAQSACRDTHCQRR
Trigger: CCGCCTCTGGCAGTGGGTGTCCCTGCAGGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATGATCCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp GTCACACTCCCTTGCTGCTCTCGTGCCTTCTGCCCAGCACTCACCTaGAGGTGCACCCTGTGCGCCTTCCCCACTGCACCCTCTGCGGGC +
Preference number: 1 (lower is better)
Translates to: VTLPCCSRAFCPALT*RCTLCAFPTAPSAG
Trigger: GCCCGCAGAGGGTGCAGTGGGGAAGGCGCACAGGGTGCACCTCCAGGTGAGTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp AGACGACCGGCCAGGCTGGGCCCGGCTGCATGCAGTGTGAGGCTCTaGCTGCTAAGTCCTGCTCTTGCTGTGTTGTGCCCTGGGGGCCAC +
Preference number: 1 (lower is better)
Translates to: RRPARLGPAACSVRL*LLSPALAVLCPGGH
Trigger: GTGGCCCCCAGGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCATGCAGCCGGGCCCAGCCTGGCCGGTCGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp CTGCCCGCCCGCGGATGGGGTGCTGGCCGAACCTACCTTGTAAAGTaGGGCTGCACAGAGGTCAGCACATGGTGGCGCCCACCGTCGAGA +
Preference number: 1 (lower is better)
Translates to: LPARGWGAGRTYLVK*GCTEVSTWWRPPSR
Trigger: TCTCGACGGTGGGCGCCACCATGTGCTGACCTCTGTGCAGCCCCACTTTACAAGGTAGGTTCGGCCAGCACCCCATCCGCGGGCGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CCCGGCTGCATGCAGTGTGAGGCTCTGGCTGCTAAGTCCTGCTCTTaGTGTGTTGTGCCCTGGGGGCCACCCTGTGTGCAGCCGCAGCTG +
Preference number: 1 (lower is better)
Translates to: PGCMQCEALAAKSCS*CVVPWGPPCVQPQL
Trigger: CAGCTGCGGCTGCACACAGGGTGGCCCCCAGGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCATGCAGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CCTCCGTTTGGCAGGTCTGTTCCGGGAACTCCCCTGATCCACCCCTaGTCCGGCCACCTGGATCCCACACCCTTCCGATCCGTCCCACAC +
Preference number: 1 (lower is better)
Translates to: PPFGRSVPGTPLIHP*SGHLDPTPFRSVPH
Trigger: GTGTGGGACGGATCGGAAGGGTGTGGGATCCAGGTGGCCGGAGCAGGGGTGGATCAGGGGAGTTCCCGGAACAGACCTGCCAAACGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCGACCAGCCATaGTGCCAGGAGTCGCCTCTCAGGTTCATCCCAGGAGCTGCATGC +
Preference number: 1 (lower is better)
Translates to: PSWWVGQGRDGSDQP*CQESPLRFIPGAAC
Trigger: GCATGCAGCTCCTGGGATGAACCTGAGAGGCGACTCCTGGCAGCATGGCTGGTCGCTGCCATCACGCCCCTGGCCAACCCACCAACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCTaGAGGGACACCCACTGCCAGAGGCGGAGGCAGGTTCTCCTGGTC +
Preference number: 1 (lower is better)
Translates to: ASADPSVSTCQAQSA*RDTHCQRRRQVLLV
Trigger: GACCAGGAGAACCTGCCTCCGCCTCTGGCAGTGGGTGTCCCTGCAGGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp AACAGAAAAAGCCCCCAGCCGCGCTGCCACCCTGACGCAGCCTTGTaGGGCCCTGAGCAGAGGACCAGCTACGTTGTGCCCGTGCCTCGA +
Preference number: 1 (lower is better)
Translates to: NRKSPQPRCHPDAAL*GPEQRTSYVVPVPR
Trigger: TCGAGGCACGGGCACAACGTAGCTGGTCCTCTGCTCAGGGCCCCACAAGGCTGCGTCAGGGTGGCAGCGCGGCTGGGGGCTTTTTCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp CTGGTAATCAGAGGGGCCCACTCCACCTGCACCGGAGGCAGCGGCTaGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCCCACTC +
Preference number: 1 (lower is better)
Translates to: LVIRGAHSTCTGGSG*GCWSIRLQPLRIPL
Trigger: GAGTGGGATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGTGCAGGTGGAGTGGGCCCCTCTGATTACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp CCTGGGGGACCGTGCAGCAGCTGTGCCCACCTAGGACCACAGGGCTaGTGGGGCTGGCAGCTTGGTAGAGGGCAGGTGCACAGCAAAGTT +
Preference number: 1 (lower is better)
Translates to: PGGPCSSCAHLGPQG*WGWQLGRGQVHSKV
Trigger: AACTTTGCTGTGCACCTGCCCTCTACCAAGCTGCCAGCCCCACCAGCCCTGTGGTCCTAGGTGGGCACAGCTGCTGCACGGTCCCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp GCTAGGGGGCAGCCGCCTGCCATCCACCCTGCTTGTGCCTTTGACTaGAAGCACGAGGGCCAGGGGCCAACTCAGGGTCTGTACACCCTG +
Preference number: 1 (lower is better)
Translates to: ARGQPPAIHPACAFD*KHEGQGPTQGLYTL
Trigger: CAGGGTGTACAGACCCTGAGTTGGCCCCTGGCCCTCGTGCTTTCAGTCAAAGGCACAAGCAGGGTGGATGGCAGGCGGCTGCCCCCTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp ATGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTaGTGGCAGCGACCAGCCATGCTGCCAGGAGTCGCCTCTCAGGTT +
Preference number: 1 (lower is better)
Translates to: MWKGCLSQLVGWPGA*WQRPAMLPGVASQV
Trigger: AACCTGAGAGGCGACTCCTGGCAGCATGGCTGGTCGCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GGCTGCACTGCTCTTGGCCGGCTTGGACCCCAGCACCGGTTCTGCTaGTCTCCCAGGCAGCTCAGCCAGGTGAATGAAAGTCCTGGGCCT +
Preference number: 1 (lower is better)
Translates to: GCTALGRLGPQHRFC*SPRQLSQVNESPGP
Trigger: AGGCCCAGGACTTTCATTCACCTGGCTGAGCTGCCTGGGAGAGCAGCAGAACCGGTGCTGGGGTCCAAGCCGGCCAAGAGCAGTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp ACCACGGAGCAGCTCAAGAGAGGAACAGGACCAGGAGGGCTGCACTaGTCTTGGCCGGCTTGGACCCCAGCACCGGTTCTGCTGCTCTCC +
Preference number: 1 (lower is better)
Translates to: TTEQLKRGTGPGGLH*SWPAWTPAPVLLLS
Trigger: GGAGAGCAGCAGAACCGGTGCTGGGGTCCAAGCCGGCCAAGAGCAGTGCAGCCCTCCTGGTCCTGTTCCTCTCTTGAGCTGCTCCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp TGGACACCACGGAGCAGCTCAAGAGAGGAACAGGACCAGGAGGGCTaGACTGCTCTTGGCCGGCTTGGACCCCAGCACCGGTTCTGCTGC +
Preference number: 1 (lower is better)
Translates to: WTPRSSSREEQDQEG*TALGRLGPQHRFCC
Trigger: GCAGCAGAACCGGTGCTGGGGTCCAAGCCGGCCAAGAGCAGTGCAGCCCTCCTGGTCCTGTTCCTCTCTTGAGCTGCTCCGTGGTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp ATCTGCCTAGCCACCCAGATGCGGGCACGTGGCCCCGTTGTGCACTaGAGGGGTGAGGGCTGTGTTAGGCATGCAGGACTCACGCTGTCC +
Preference number: 1 (lower is better)
Translates to: ICLATQMRARGPVVH*RGEGCVRHAGLTLS
Trigger: GGACAGCGTGAGTCCTGCATGCCTAACACAGCCCTCACCCCTCCAGTGCACAACGGGGCCACGTGCCCGCATCTGGGTGGCTAGGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp TGTGAGGCGGTGCTTGTCACACTCCCTTGCTGCTCTCGTGCCTTCTaGCCAGCACTCACCTGGAGGTGCACCCTGTGCGCCTTCCCCACT +
Preference number: 1 (lower is better)
Translates to: CEAVLVTLPCCSRAF*PALTWRCTLCAFPT
Trigger: AGTGGGGAAGGCGCACAGGGTGCACCTCCAGGTGAGTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGCACCGCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp TGTGGCCTTGGCCACTGTGAGGCGGTGCTTGTCACACTCCCTTGCTaGTCTCGTGCCTTCTGCCCAGCACTCACCTGGAGGTGCACCCTG +
Preference number: 1 (lower is better)
Translates to: CGLGHCEAVLVTLPC*SRAFCPALTWRCTL
Trigger: CAGGGTGCACCTCCAGGTGAGTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGCACCGCCTCACAGTGGCCAAGGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GACTGTGGCCTTGGCCACTGTGAGGCGGTGCTTGTCACACTCCCTTaGTGCTCTCGTGCCTTCTGCCCAGCACTCACCTGGAGGTGCACC +
Preference number: 1 (lower is better)
Translates to: DCGLGHCEAVLVTLP*CSRAFCPALTWRCT
Trigger: GGTGCACCTCCAGGTGAGTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGCACCGCCTCACAGTGGCCAAGGCCACAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp TGTGCAGCCGCAGCTGTGACTGTGGCCTTGGCCACTGTGAGGCGGTaGTTGTCACACTCCCTTGCTGCTCTCGTGCCTTCTGCCCAGCAC +
Preference number: 1 (lower is better)
Translates to: CAAAAVTVALATVRR*LSHSLAALVPSAQH
Trigger: GTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGCACCGCCTCACAGTGGCCAAGGCCACAGTCACAGCTGCGGCTGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp TGCAGTGTGAGGCTCTGGCTGCTAAGTCCTGCTCTTGCTGTGTTGTaGCCTGGGGGCCACCCTGTGTGCAGCCGCAGCTGTGACTGTGGC +
Preference number: 1 (lower is better)
Translates to: CSVRLWLLSPALAVL*PGGHPVCSRSCDCG
Trigger: GCCACAGTCACAGCTGCGGCTGCACACAGGGTGGCCCCCAGGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGCTGCATaGAGTGTGAGGCTCTGGCTGCTAAGTCCTGCTCTTGCTGTGTTG +
Preference number: 1 (lower is better)
Translates to: PAFRRRRPARLGPAA*SVRLWLLSPALAVL
Trigger: CAACACAGCAAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCATGCAGCCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GTCGCCTCTCAGGTTCATCCCAGGAGCTGCATGCTGACCTTCGCGTaGTGCCTCCGGGCCACCCCTCCTCCCCACTTAATGCCTTCACTG +
Preference number: 1 (lower is better)
Translates to: VASQVHPRSCMLTFA*CLRATPPPHLMPSL
Trigger: CAGTGAAGGCATTAAGTGGGGAGGAGGGGTGGCCCGGAGGCAGCACGCGAAGGTCAGCATGCAGCTCCTGGGATGAACCTGAGAGGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp ATCCCCAGGCCTTGGAAGCCCTCCTCGGCTGTACCCCACGGCGGCTaGCCATGTCCACTTCACTCAGTGCAGCCACCCTCAGGCTGTAAT +
Preference number: 1 (lower is better)
Translates to: IPRPWKPSSAVPHGG*PCPLHSVQPPSGCN
Trigger: ATTACAGCCTGAGGGTGGCTGCACTGAGTGAAGTGGACATGGCCAGCCGCCGTGGGGTACAGCCGAGGAGGGCTTCCAAGGCCTGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp TCAGCAGGCAGTGCCACTCGCCAACCTCATGCTGGCATGCACACCTaGGCCCTCATGTGGGATACCCACCTCGTGGCTGTGGGACGTAGG +
Preference number: 1 (lower is better)
Translates to: SAGSATRQPHAGMHT*ALMWDTHLVAVGRR
Trigger: CCTACGTCCCACAGCCACGAGGTGGGTATCCCACATGAGGGCCCAGGTGTGCATGCCAGCATGAGGTTGGCGAGTGGCACTGCCTGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp ATTCAGAACAAGATGTGCCTGGACACTGCTCAACGCCACATGGCCTaGGGCAGGGAGCTCAAGGCCAGGCTAGGGGGCAGCCGCCTGCCA +
Preference number: 1 (lower is better)
Translates to: IQNKMCLDTAQRHMA*GRELKARLGGSRLP
Trigger: TGGCAGGCGGCTGCCCCCTAGCCTGGCCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCTTGTTCTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp GTGGGAGCCAAGCCACAGCTCGCTGACCTGGGGAAGCTGACAGAGTaGCAGAGGGTCTCAAGGACTCTCCACCCACAAGGCGGGAATGGG +
Preference number: 1 (lower is better)
Translates to: VGAKPQLADLGKLTE*QRVSRTLHPQGGNG
Trigger: CCCATTCCCGCCTTGTGGGTGGAGAGTCCTTGAGACCCTCTGTCACTCTGTCAGCTTCCCCAGGTCAGCGAGCTGTGGCTTGGCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp GCTGATGCGTGGGAGCCAAGCCACAGCTCGCTGACCTGGGGAAGCTaGCAGAGTGACAGAGGGTCTCAAGGACTCTCCACCCACAAGGCG +
Preference number: 1 (lower is better)
Translates to: ADAWEPSHSSLTWGS*QSDRGSQGLSTHKA
Trigger: CGCCTTGTGGGTGGAGAGTCCTTGAGACCCTCTGTCACTCTGTCAGCTTCCCCAGGTCAGCGAGCTGTGGCTTGGCTCCCACGCATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GTGACAGCCTGTGATGAGCACCCAGGGCACAGCTCCCTCAGCACCTaGAGTCACTGCAGCCTAAACCCAGGACCCTTCCCCTCCCTGACA +
Preference number: 1 (lower is better)
Translates to: VTACDEHPGHSSLST*SHCSLNPGPFPSLT
Trigger: TGTCAGGGAGGGGAAGGGTCCTGGGTTTAGGCTGCAGTGACTGCAGGTGCTGAGGGAGCTGTGCCCTGGGTGCTCATCACAGGCTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp CCTCCTCGGGGTGAGGGGTCATGTGGACATCGACGCAGCTATGGTTaGGGCCTATCATCTCCTGAGGCCTGGCCCAGGAAACCCACACTC +
Preference number: 1 (lower is better)
Translates to: PPRGEGSCGHRRSYG*GLSSPEAWPRKPTL
Trigger: GAGTGTGGGTTTCCTGGGCCAGGCCTCAGGAGATGATAGGCCCCAACCATAGCTGCGTCGATGTCCACATGACCCCTCACCCCGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GTAAGACATCAGCAGGCAGTGCCACTCGCCAACCTCATGCTGGCATaGACACCTGGGCCCTCATGTGGGATACCCACCTCGTGGCTGTGG +
Preference number: 1 (lower is better)
Translates to: VRHQQAVPLANLMLA*TPGPSCGIPTSWLW
Trigger: CCACAGCCACGAGGTGGGTATCCCACATGAGGGCCCAGGTGTGCATGCCAGCATGAGGTTGGCGAGTGGCACTGCCTGCTGATGTCTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CTTCATCCCTCAACTGATGCTTTCCTATGTGGACTTCCCGGCCAGTaGTGTGGGACCTCCCCTGTAGGGCTGGCCAGCCTCATGGGCTGG +
Preference number: 1 (lower is better)
Translates to: LHPSTDAFLCGLPGQ*CGTSPVGLASLMGW
Trigger: CCAGCCCATGAGGCTGGCCAGCCCTACAGGGGAGGTCCCACAGCACTGGCCGGGAAGTCCACATAGGAAAGCATCAGTTGAGGGATGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp CTTGGGCCAGGGGCCGCTTTCCCGGCCAGCACTGACATTCCCGTTTaGTGGAACGGTCCCCATGGTACCTCTGACCAACAGAGAAGTGTG +
Preference number: 1 (lower is better)
Translates to: LGPGAAFPASTDIPV*WNGPHGTSDQQRSV
Trigger: CACACTTCTCTGTTGGTCAGAGGTACCATGGGGACCGTTCCATCAAACGGGAATGTCAGTGCTGGCCGGGAAAGCGGCCCCTGGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp ACCCTGTGGCCGTTGTCCCCATCGTCCGTGGCTTCATCCCTCAACTaGTGCTTTCCTATGTGGACTTCCCGGCCAGTGCTGTGGGACCTC +
Preference number: 1 (lower is better)
Translates to: TLWPLSPSSVASSLN*CFPMWTSRPVLWDL
Trigger: GAGGTCCCACAGCACTGGCCGGGAAGTCCACATAGGAAAGCATCAGTTGAGGGATGAAGCCACGGACGATGGGGACAACGGCCACAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTaGCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTC +
Preference number: 1 (lower is better)
Translates to: AVPTPSLHTEIQNKM*LDTAQRHMAWGREL
Trigger: GAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CTGCAGGTAACACGCAGGGAGGAAGGAAAAGGCTCTAGGCACAGCTaGTTGTCTAAGAGGGACCCTGTTGGCGGCGCAACGCTGGGTGAG +
Preference number: 1 (lower is better)
Translates to: LQVTRREEGKGSRHS*LSKRDPVGGATLGE
Trigger: CTCACCCAGCGTTGCGCCGCCAACAGGGTCCCTCTTAGACAAGCAGCTGTGCCTAGAGCCTTTTCCTTCCTCCCTGCGTGTTACCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp CTTCCTGATCCTGATCCTGGCCTCAACCTGTGTGTTGGGAGCTCCTaGCCTCCTCGGGGTGAGGGGTCATGTGGACATCGACGCAGCTAT +
Preference number: 1 (lower is better)
Translates to: LPDPDPGLNLCVGSS*PPRGEGSCGHRRSY
Trigger: ATAGCTGCGTCGATGTCCACATGACCCCTCACCCCGAGGAGGCCAGGAGCTCCCAACACACAGGTTGAGGCCAGGATCAGGATCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp TCCGGCAATCCGGGCAGACACAGGCGTGTGTGGTCCCAGCTTCTCTaGATCTGCCCATGGGCCCCACTCCAATATTCAGGGTCATGGTTC +
Preference number: 1 (lower is better)
Translates to: SGNPGRHRRVWSQLL*ICPWAPLQYSGSWF
Trigger: GAACCATGACCCTGAATATTGGAGTGGGGCCCATGGGCAGATCCAGAGAAGCTGGGACCACACACGCCTGTGTCTGCCCGGATTGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp CACTGCAGCCTAAACCCAGGACCCTTCCCCTCCCTGACACCTCAGTaGTATGAAAATACCTCCCGGAGTGCCCTACGCATCCTGGCGGCT +
Preference number: 1 (lower is better)
Translates to: HCSLNPGPFPSLTPQ*YENTSRSALRILAA
Trigger: AGCCGCCAGGATGCGTAGGGCACTCCGGGAGGTATTTTCATATCACTGAGGTGTCAGGGAGGGGAAGGGTCCTGGGTTTAGGCTGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTaGAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGG +
Preference number: 1 (lower is better)
Translates to: GRCAFGKAVKGMQGN*KANSHSTYPAAVMG
Trigger: CCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp AGGTTTCAGAGCCCAAGTCAGGAGGTCAAGTGTGCATGCAAGAGGTaGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCACAGC +
Preference number: 1 (lower is better)
Translates to: RFQSPSQEVKCACKR*QGTDVLLFPGHLHS
Trigger: GCTGTGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCACACTTGACCTCCTGACTTGGGCTCTGAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp TACCAACCTCATGAAGACAGCGGGGACTCCATGGTCCTTGGGCCATaGCTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCT +
Preference number: 1 (lower is better)
Translates to: YQPHEDSGDSMVLGP*LAGPQRPLRFQAKA
Trigger: AGCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGTCTTCATGAGGTTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
3UTR TCA 90 bp CAGCCTAAACCCAGGACCCTTCCCCTCCCTGACACCTCAGTGATATaGAAATACCTCCCGGAGTGCCCTACGCATCCTGGCGGCTATAGG +
Preference number: 1 (lower is better)
Translates to: QPKPRTLPLPDTSVI*KYLPECPTHPGGYR
Trigger: CCTATAGCCGCCAGGATGCGTAGGGCACTCCGGGAGGTATTTTCATATCACTGAGGTGTCAGGGAGGGGAAGGGTCCTGGGTTTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp AATCCGGGCAGACACAGGCGTGTGTGGTCCCAGCTTCTCTGGATCTaGCCATGGGCCCCACTCCAATATTCAGGGTCATGGTTCTTTCCC +
Preference number: 1 (lower is better)
Translates to: NPGRHRRVWSQLLWI*PWAPLQYSGSWFFP
Trigger: GGGAAAGAACCATGACCCTGAATATTGGAGTGGGGCCCATGGGCAGATCCAGAGAAGCTGGGACCACACACGCCTGTGTCTGCCCGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp AAGGCTGGTCAGACGCATGGTGATTCATCACGACCCAGGTTCTGTTaGCACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGG +
Preference number: 1 (lower is better)
Translates to: KAGQTHGDSSRPRFC*HKGRPVQSHMALLW
Trigger: CCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTCAACAGAACCTGGGTCGTGATGAATCACCATGCGTCTGACCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GATCCGTCCCACACATGTTCAGATTTCTGCCTGGAAACCTGGAAATaGCATGTGGTCCTGCAGGAGGCTGGTGCCACTCTCAGGGTCACC +
Preference number: 1 (lower is better)
Translates to: DPSHTCSDFCLETWK*HVVLQEAGATLRVT
Trigger: GGTGACCCTGAGAGTGGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATCTGAACATGTGTGGGACGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp TTTCCTCAGCTTAGCACACCCTGTGGCCGTTGTCCCCATCGTCCGTaGCTTCATCCCTCAACTGATGCTTTCCTATGTGGACTTCCCGGC +
Preference number: 1 (lower is better)
Translates to: FPQLSTPCGRCPHRP*LHPSTDAFLCGLPG
Trigger: GCCGGGAAGTCCACATAGGAAAGCATCAGTTGAGGGATGAAGCCACGGACGATGGGGACAACGGCCACAGGGTGTGCTAAGCTGAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp TGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCACAGCTaGATGGTGGAAGCAGTTCACTTAAAGGCCATGAGTTACTCGGGA +
Preference number: 1 (lower is better)
Translates to: WQGTDVLLFPGHLHS*MVEAVHLKAMSYSG
Trigger: TCCCGAGTAACTCATGGCCTTTAAGTGAACTGCTTCCACCATCCAGCTGTGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp GGCTGTGTTAGGCATGCAGGACTCACGCTGTCCCGACTCCATCCCTaGACACTGAGATTCAGAACAAGATGTGCCTGGACACTGCTCAAC +
Preference number: 1 (lower is better)
Translates to: GCVRHAGLTLSRLHP*TLRFRTRCAWTLLN
Trigger: GTTGAGCAGTGTCCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGTGAGTCCTGCATGCCTAACACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CTTCTTGGCAGAGACACAGGTGGGAAACACCTGATTGAACATCATTaGCTGGGGAGTGGAGACACGCACAGCACGTCAACATGGAGCGCC +
Preference number: 1 (lower is better)
Translates to: LLGRDTGGKHLIEHH*LGSGDTHSTSTWSA
Trigger: GGCGCTCCATGTTGACGTGCTGTGCGTGTCTCCACTCCCCAGGCAATGATGTTCAATCAGGTGTTTCCCACCTGTGTCTCTGCCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp GAAACTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATaGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACAGCCTGT +
Preference number: 1 (lower is better)
Translates to: ETAKPIPTPPTLPLS*GCQNLTPSLTVTAC
Trigger: ACAGGCTGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp AGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATaGAGGAAGATGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGG +
Preference number: 1 (lower is better)
Translates to: SSLWLERPHCYPRAL*RKMWKGCLSQLVGW
Trigger: CCAACCCACCAACTGGGAGAGGCAGCCCTTCCACATCTTCCTCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp TTAGGCATGCAGGACTCACGCTGTCCCGACTCCATCCCTGCACACTaGGATTCAGAACAAGATGTGCCTGGACACTGCTCAACGCCACAT +
Preference number: 1 (lower is better)
Translates to: LGMQDSRCPDSIPAH*DSEQDVPGHCSTPH
Trigger: ATGTGGCGTTGAGCAGTGTCCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGTGAGTCCTGCATGCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp ACATTTTACAGGTTTCAGAGCCCAAGTCAGGAGGTCAAGTGTGCATaGAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCAC +
Preference number: 1 (lower is better)
Translates to: TFYRFQSPSQEVKCA*KRWQGTDVLLFPGH
Trigger: GTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCACACTTGACCTCCTGACTTGGGCTCTGAAACCTGTAAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp CTTCTCTGGATCTGCCCATGGGCCCCACTCCAATATTCAGGGTCATaGTTCTTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGG +
Preference number: 1 (lower is better)
Translates to: LLWICPWAPLQYSGS*FFPNQHPLLGGDDR
Trigger: CCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAAGAACCATGACCCTGAATATTGGAGTGGGGCCCATGGGCAGATCCAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp TGTTCTGTGGCTTCTTGGCAGAGACACAGGTGGGAAACACCTGATTaGACATCATTGCCTGGGGAGTGGAGACACGCACAGCACGTCAAC +
Preference number: 1 (lower is better)
Translates to: CSVASWQRHRWETPD*TSLPGEWRHAQHVN
Trigger: GTTGACGTGCTGTGCGTGTCTCCACTCCCCAGGCAATGATGTTCAATCAGGTGTTTCCCACCTGTGTCTCTGCCAAGAAGCCACAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTaGTACCCAAGAGCATTATGGAGGAAGATGTGGAAGGGCTGCCTC +
Preference number: 1 (lower is better)
Translates to: RCFQTPSSLWLERPH*YPRALWRKMWKGCL
Trigger: GAGGCAGCCCTTCCACATCTTCCTCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp CCTTCACTGCTGGCTCTGTTGGCGTTCCTGCCAGCCTACAGGAAGTaGCTGTTTGCTAGGAAGAGAATGCCAATGTTCAGGTGCATCTTT +
Preference number: 1 (lower is better)
Translates to: PSLLALLAFLPAYRK*LFARKRMPMFRCIF
Trigger: AAAGATGCACCTGAACATTGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAACAGAGCCAGCAGTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp TTTCTTCTTCTGTTGTGGGGGTTTCAAGGCTGGTCAGACGCATGGTaGTTCATCACGACCCAGGTTCTGTTGACACAAAGGCCGACCTGT +
Preference number: 1 (lower is better)
Translates to: FLLLLWGFQGWSDAW*FITTQVLLTQRPTC
Trigger: ACAGGTCGGCCTTTGTGTCAACAGAACCTGGGTCGTGATGAATCACCATGCGTCTGACCAGCCTTGAAACCCCCACAACAGAAGAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 90 bp CGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATaGCAATGTTCAGGTGCATCTTTTCCAAGCTGGATGTCTGGAGCT +
Preference number: 1 (lower is better)
Translates to: RSCQPTGSGCLLGRE*QCSGASFPSWMSGA
Trigger: AGCTCCAGACATCCAGCTTGGAAAAGATGCACCTGAACATTGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp ATGCCAATGTTCAGGTGCATCTTTTCCAAGCTGGATGTCTGGAGCTaGGACCGTTTCTTCTTCTGTTGTGGGGGTTTCAAGGCTGGTCAG +
Preference number: 1 (lower is better)
Translates to: MPMFRCIFSKLDVWS*DRFFFCCGGFKAGQ
Trigger: CTGACCAGCCTTGAAACCCCCACAACAGAAGAAGAAACGGTCTCAGCTCCAGACATCCAGCTTGGAAAAGATGCACCTGAACATTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp ATGGCAAGAAATGTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTaGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAGGAAG +
Preference number: 1 (lower is better)
Translates to: MARNVRRCFQTPSSL*LERPHCYPRALWRK
Trigger: CTTCCTCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGACATTTCTTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp AAGAAATGTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTaGGAGGCCTCACTGCTACCCAAGAGCATTATGGAGGAAGATGTG +
Preference number: 1 (lower is better)
Translates to: KKCPPLFPNTKFSLA*EASLLPKSIMEEDV
Trigger: CACATCTTCCTCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGACATTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 90 bp TTGCTAGGAAGAGAATGCCAATGTTCAGGTGCATCTTTTCCAAGCTaGATGTCTGGAGCTGAGACCGTTTCTTCTTCTGTTGTGGGGGTT +
Preference number: 1 (lower is better)
Translates to: LLGRECQCSGASFPS*MSGAETVSSSVVGV
Trigger: AACCCCCACAACAGAAGAAGAAACGGTCTCAGCTCCAGACATCCAGCTTGGAAAAGATGCACCTGAACATTGGCATTCTCTTCCTAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 90 bp CCCCAAAAACACAGGATGGTAGAACACACCTACCTGAGTTGGCACTaGAAATGGCAAGAAATGTCCGCCGTTGTTTCCAAACACCAAGTT +
Preference number: 1 (lower is better)
Translates to: PQKHRMVEHTYLSWH*KWQEMSAVVSKHQV
Trigger: AACTTGGTGTTTGGAAACAACGGCGGACATTTCTTGCCATTTTCAGTGCCAACTCAGGTAGGTGTGTTCTACCATCCTGTGTTTTTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGCTGGCATGCACACCTaGGCCCTCATGTGGGATACC +
Preference number: 2 (lower is better)
Translates to: RDPVGGATLGECCPPADGAGMHT*ALMWDT
Trigger: GGTATCCCACATGAGGGCCCAGGTGTGCATGCCAGC...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp GGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTaGCAGGGCAACTGCCTCAAGGGAGGCCACCCCGGGCCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: GLEAQVGVPRSIGRA*QGNCLKGGHPGPSA
Trigger: AGCTGAAGGCCCGGGGTGGCCTCCCTTGAGGCAGTTGCCCTGCAAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCCTGGCCTCCTCGGGGTaGGGGGTCATGTGGACATCG +
Preference number: 2 (lower is better)
Translates to: QASTRARWSPSLGQGPLSLASSG*GVMWTS
Trigger: CGATGTCCACATGACCCCTCACCCCGAGGAGGCCAG...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGCCCTGCTTGTGCCTTTaGCTGAAAGCACGAGGGCCA +
Preference number: 2 (lower is better)
Translates to: RDPVGGATLGECCPPADGPCLCL*LKARGP
Trigger: TGGCCCTCGTGCTTTCAGTCAAAGGCACAAGCAGGG...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGCTAAGTCCTGCTCTTaGTGTGTTGTGCCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: RDPVGGATLGECCPPADGAKSCS*CVVPWG
Trigger: CCCCCAGGGCACAACACAGCAAGAGCAGGACTTAGC...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGAGGCGGGGCAGATGTaGCTTTGGCAAGGCTGTCAA +
Preference number: 2 (lower is better)
Translates to: RDPVGGATLGECCPPADGEAGQM*LWQGCQ
Trigger: TTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTC...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGATGTGCCTGGACACTaGTCAACGCCACATGGCCTG +
Preference number: 2 (lower is better)
Translates to: RDPVGGATLGECCPPADGDVPGH*STPHGL
Trigger: CAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATC...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCGCACTCACCTGGAGGTaGACCCTGTGCGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSALTWR*TLCAFP
Trigger: GGGGAAGGCGCACAGGGTGCACCTCCAGGTGAGTGC...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGAGCTCCCTCAGCACCTaGAGTCACTGCAGCCTAAAC +
Preference number: 2 (lower is better)
Translates to: RDPVGGATLGECCPPADGSSLST*SHCSLN
Trigger: GTTTAGGCTGCAGTGACTGCAGGTGCTGAGGGAGCT...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp GTCCAACGGAGCCAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTaGGGCCAGGGGCCGCTTTCCCGGCCAGCACTGACATTCCCGTTT +
Preference number: 2 (lower is better)
Translates to: VQRSQASTRARWSPS*GQGPLSRPALTFPF
Trigger: AAACGGGAATGTCAGTGCTGGCCGGGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTGGCTCCGTTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGCCCGGATCCCACATCTaGCCTGGCCCTGTGCGCTGC +
Preference number: 2 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARPGSHI*PGPVRC
Trigger: GCAGCGCACAGGGCCAGGCCAGATGTGGGATCCGGG...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCCCTGCTCCGGCCACCTaGATCCCACACCCTTCCGAT +
Preference number: 2 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSPAPAT*IPHPSD
Trigger: ATCGGAAGGGTGTGGGATCCAGGTGGCCGGAGCAGG...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp GCCAGGCTAGGGGGCAGCCGCCTGCCATCCACCCTGCTTGTGCCTTaGACTGAAAGCACGAGGGCCAGGGGCCAACTCAGGGTCTGTACA +
Preference number: 2 (lower is better)
Translates to: ARLGGSRLPSTLLVP*TESTRARGQLRVCT
Trigger: TGTACAGACCCTGAGTTGGCCCCTGGCCCTCGTGCTTTCAGTCAAAGGCACAAGCAGGGTGGATGGCAGGCGGCTGCCCCCTAGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp AAGGAAAAGGCTCTAGGCACAGCTGCTTGTCTAAGAGGGACCCTGTaGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGG +
Preference number: 2 (lower is better)
Translates to: KEKALGTAACLRGTL*AAQRWVSAARPRMG
Trigger: CCCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCTCTTAGACAAGCAGCTGTGCCTAGAGCCTTTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp GAGTCTAGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGTGCGCCTTCCCCACTaGACCCTCTGCGGGCAGGCG +
Preference number: 2 (lower is better)
Translates to: ESSSRTRSPGGGPKEHRQVRLPH*TLCGQA
Trigger: CGCCTGCCCGCAGAGGGTGCAGTGGGGAAGGCGCAC...CTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACTAGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCTGGGCCATGACTTGCTaGTCCTCAGAGGCCCTTGAG +
Preference number: 2 (lower is better)
Translates to: TARALAGPQSHRPVMRHSWAMTC*SSEALE
Trigger: CTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCA...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
3UTR-3UTR CCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAGCGGGGACTCCATaGTCCTTGGGCCATGACTTG +
Preference number: 2 (lower is better)
Translates to: TARALAGPQSHRPVMRHSTAGTP*SLGHDL
Trigger: CAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGT...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
3UTR-3UTR CCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCGGCACTGATGCTAAGTaGGGGACCAGGGCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSGTDAK*GTRASS
Trigger: TGAGGAGGCCCTGGTCCCCCACTTAGCATCAGTGCC...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCGGCCCCGTTGTGCACTaGAGGGGTGAGGGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: HLPASADPSVSTCQAQSAGPVVH*RGEGCV
Trigger: AACACAGCCCTCACCCCTCCAGTGCACAACGGGGCC...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp GCAGCCGCAGCTGTGACTGTGGCCTTGGCCACTGTGAGGCGGTGCTaGTCACACTCCCTTGCTGCTCTCGTGCCTTCTGCCCAGCACTCA +
Preference number: 2 (lower is better)
Translates to: AAAAVTVALATVRRC*SHSLAALVPSAQHS
Trigger: TGAGTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGCACCGCCTCACAGTGGCCAAGGCCACAGTCACAGCTGCGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCGCCAAGGCTGGGGCCTaGTGCCCACCTCCCTGCCCG +
Preference number: 2 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCAKAGA*CPPPCP
Trigger: CGGGCAGGGAGGTGGGCATCAGGCCCCAGCCTTGGC...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTTTCCGGGAACTCCCCTaGTCCACCCCTGCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPFRELP*STPAPA
Trigger: GGCCGGAGCAGGGGTGGATCAGGGGAGTTCCCGGAA...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCCCTTGGGCCATGACTTaGTGGTCCTCAGAGGCCCTT +
Preference number: 2 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSPWAMT*WSSEAL
Trigger: AAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGACAAGCCAACGTCTCCTaGAGGCCTCGGACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: DTKADLSRATWLCCGHHGQANVS*RPRTAR
Trigger: CCTGGCCGTCCGAGGCCTGCAGGAGACGTTGGCTTG...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGACAGGCTGGGCCCGGCTaGATGCAGTGTGAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: DTKADLSRATWLCCGHHGQAGPG*MQCEAL
Trigger: CAGAGCCTCACACTGCATGCAGCCGGGCCCAGCCTG...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCCAGCTTCTCTGGATCTaGCCATGGGCCCCACTCCAA +
Preference number: 2 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRIQLLWI*PWAPLQ
Trigger: TTGGAGTGGGGCCCATGGGCAGATCCAGAGAAGCTG...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCACCAGGAGGGCTGCACTaGTCTTGGCCGGCTTGGACC +
Preference number: 2 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPAPGGLH*SWPAWT
Trigger: GGTCCAAGCCGGCCAAGAGCAGTGCAGCCCTCCTGG...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGGGGGAGGCACGGCCTTaGGACCCCCTGCAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GADVPLARLSRACRETAKGEARP*DPLQWV
Trigger: CACCCACTGCAGGGGGTCCCAAGGCCGTGCCTCCCC...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGCCATGTTCCTCACAGTaGGGTTGGGGAGGCACGGCC +
Preference number: 2 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRPCSSQ*GWGGTA
Trigger: GGCCGTGCCTCCCCAACCCCACTGTGAGGAACATGG...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp GCATGCAGTGTGAGGCTCTGGCTGCTAAGTCCTGCTCTTGCTGTGTaGTGCCCTGGGGGCCACCCTGTGTGCAGCCGCAGCTGTGACTGT +
Preference number: 2 (lower is better)
Translates to: ACSVRLWLLSPALAV*CPGGHPVCSRSCDC
Trigger: ACAGTCACAGCTGCGGCTGCACACAGGGTGGCCCCCAGGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGTCCTCAGAGGCCCTTaGGGTTTCAGGCCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHAVLRGP*GFRPRL
Trigger: CAGCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGAC...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACACTCTGCGGGCAGGCGTaGCCTCCCGGATCCCACATC +
Preference number: 2 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTLCGQA*PPGSHI
Trigger: GATGTGGGATCCGGGAGGGCACGCCTGCCCGCAGAG...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGTGCTCTCGTGCCTTCTaGCCAGCACTCACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRCSRAF*PALTWR
Trigger: CCTCCAGGTGAGTGCTGGGCAGAAGGCACGAGAGCA...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTTGTGTTGGGAGCTCCTaGCCTCCTCGGGGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPCVGSS*PPRGEG
Trigger: CCCCTCACCCCGAGGAGGCCAGGAGCTCCCAACACA...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGATGCCCAGCACTCACCTaGAGGTGCACCCTGTGCGCC +
Preference number: 2 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRCPALT*RCTLCA
Trigger: GGCGCACAGGGTGCACCTCCAGGTGAGTGCTGGGCA...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCAGTCCTGGGCACCTGGTaGCCACCCTTGTCCAACGGA +
Preference number: 2 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPAVLGTW*PPLSNG
Trigger: TCCGTTGGACAAGGGTGGCCACCAGGTGCCCAGGAC...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCACCCTGCCGCTGTCATaGGGATGTCAGAACCTGACA +
Preference number: 2 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSTLPLS*GCQNLT
Trigger: TGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCCACATGGCTCTGCTGTaGACACCACGGAGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: HLPASADPSVSTCQAQSAHMALL*TPRSSS
Trigger: TGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTG...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCACACCTTCCCTCACTGTaGCAGCCTGTGATGAGCACC +
Preference number: 2 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHAHLPSL*QPVMST
Trigger: GGTGCTCATCACAGGCTGTCACAGTGAGGGAAGGTG...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCACCAGGAGCTGCATGCTaGCCTTCGCGTGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPPGAAC*PSRAAS
Trigger: GGAGGCAGCACGCGAAGGTCAGCATGCAGCTCCTGG...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCGGCAGGAGAATCGCTTaGACCTGGGAATCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRIGRRIA*TWESEV
Trigger: AACCTCTGATTCCCAGGTTCAAGCGATTCTCCTGCC...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGATGGAGGTGCACCCTGTaGGCCTTCCCCACTGCACCC +
Preference number: 2 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRWRCTL*AFPTAP
Trigger: GGGTGCAGTGGGGAAGGCGCACAGGGTGCACCTCCA...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGAGCTCTTGCTGTGTTGTaGCCTGGGGGCCACCCTGTG +
Preference number: 2 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRALAVL*PGGHPV
Trigger: CACAGGGTGGCCCCCAGGGCACAACACAGCAAGAGC...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGACATGTTCAGATTTCTaGCTGGAAACCTGGAAATGC +
Preference number: 2 (lower is better)
Translates to: RDPVGGATLGECCPPADGTCSDF*LETWKC
Trigger: GCATTTCCAGGTTTCCAGGCAGAAATCTGAACATGT...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCAAAATACCTCCCGGAGTaGCCTACGCATCCTGGCGGC +
Preference number: 2 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPAKYLPE*PTHPGG
Trigger: GCCGCCAGGATGCGTAGGGCACTCCGGGAGGTATTT...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGTGGGCCATGACTTGCTaGTCCTCAGAGGCCCTTGAG +
Preference number: 2 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARWAMTC*SSEALE
Trigger: CTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCA...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAACAGCGGGGACTCCATaGTCCTTGGGCCATGACTTG +
Preference number: 2 (lower is better)
Translates to: QGSGWPPESPSCDEALHKTAGTP*SLGHDL
Trigger: CAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGT...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
3UTR-3UTR CCA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCAGACGACCGGCCAGGCTaGGCCCGGCTGCATGCAGTG +
Preference number: 2 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPDDRPG*ARLHAV
Trigger: CACTGCATGCAGCCGGGCCCAGCCTGGCCGGTCGTC...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGACCTCTCCAAAGGTCCTaGGCACCTGGTGGCCACCCT +
Preference number: 2 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRPLQRS*APGGHP
Trigger: AGGGTGGCCACCAGGTGCCCAGGACCTTTGGAGAGG...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp CGGGCCACCCCTCCTCCCCACTTAATGCCTTCACTGCTGGCTCTGTaGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: RATPPPHLMPSLLAL*AFLPAYRKWLFARK
Trigger: CTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAACAGAGCCAGCAGTGAAGGCATTAAGTGGGGAGGAGGGGTGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp CAGGTAACACGCAGGGAGGAAGGAAAAGGCTCTAGGCACAGCTGCTaGTCTAAGAGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: QVTRREEGKGSRHSC*SKRDPVGGATLGEC
Trigger: GCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCTCTTAGACAAGCAGCTGTGCCTAGAGCCTTTTCCTTCCTCCCTGCGTGTTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp AGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTTGTCACACTCCCTTGCTaGTCTCGTGCCTTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: SSRTRSPGGGPKEHRQGLVTLPC*SRAFCP
Trigger: TGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGAC...AAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGGTCCACTTCACTCAGTaGAGCCACCCTCAGGCTGTA +
Preference number: 2 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRVHFTQ*SHPQAV
Trigger: TACAGCCTGAGGGTGGCTGCACTGAGTGAAGTGGAC...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGGGCCTTGGGACCCCCTaGAGTGGGTGCACAGGTCTC +
Preference number: 2 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWGLGTP*SGCTGL
Trigger: GAGACCTGTGCACCCACTGCAGGGGGTCCCAAGGCC...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAGGCCAGGGCTCTGGCTaGCCCCCAGAGTCACCGTCC +
Preference number: 2 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGGQGSG*PPESPS
Trigger: GGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCC...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGTGGCCTTGGCCACTGTaGGGCGGTGCTTGTCACACT +
Preference number: 2 (lower is better)
Translates to: GADVPLARLSRACRETAKWPWPL*GGACHT
Trigger: AGTGTGACAAGCACCGCCTCACAGTGGCCAAGGCCA...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCACCCCAGCACCGGTTCTaGTGCTCTCCCAGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPPQHRF*CSPRQL
Trigger: GAGCTGCCTGGGAGAGCAGCAGAACCGGTGCTGGGG...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCCTTGAGAGGCCTCACTaGTACCCAAGAGCATTATGG +
Preference number: 2 (lower is better)
Translates to: HLPASADPSVSTCQAQSALERPH*YPRALW
Trigger: CCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAG...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACAAGTACCCGAGCCAGGTaGTCTCCAAGCTTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTSTRAR*SPSLGQ
Trigger: CTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACT...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGGAAATACCAACCTCATaGAGACAGCGGGGACTCCAT +
Preference number: 2 (lower is better)
Translates to: RCAWTLLNATWPGAGSSREIPTS*RQRGLH
Trigger: ATGGAGTCCCCGCTGTCTTCATGAGGTTGGTATTTC...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAGAAATACCAACCTCATaGAGACAGCGGGGACTCCAT +
Preference number: 2 (lower is better)
Translates to: QGSGWPPESPSCDEALHKEIPTS*RQRGLH
Trigger: ATGGAGTCCCCGCTGTCTTCATGAGGTTGGTATTTC...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
3UTR-3UTR TCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCGCTTGTGCCTTTGACTaGAAGCACGAGGGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCACAFD*KHEGQG
Trigger: CCCCTGGCCCTCGTGCTTTCAGTCAAAGGCACAAGC...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACAGCCACTGTGAGGCGGTaGTTGTCACACTCCCTTGCT +
Preference number: 2 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTATVRR*LSHSLA
Trigger: AGCAAGGGAGTGTGACAAGCACCGCCTCACAGTGGC...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAAGGCTGTCAAGGGCATaGAGGGAAACTGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: DTKADLSRATWLCCGHHGRLSRA*RETAKP
Trigger: TGGCTTTGCAGTTTCCCTGCATGCCCTTGACAGCCT...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGAACAGCGGGGACTCCATaGTCCTTGGGCCATGACTTG +
Preference number: 2 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRTAGTP*SLGHDL
Trigger: CAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGT...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCAATAAAAGCTGATGCGTaGGAGCCAAGCCACAGCTCG +
Preference number: 2 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPAIKADA*EPSHSS
Trigger: CGAGCTGTGGCTTGGCTCCCACGCATCAGCTTTTAT...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCAGACACCTCAGTGATATaGAAATACCTCCCGGAGTGC +
Preference number: 2 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPADTSVI*KYLPEC
Trigger: GCACTCCGGGAGGTATTTTCATATCACTGAGGTGTC...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGACTGGCTGCTAAGTCCTaGTCTTGCTGTGTTGTGCCC +
Preference number: 2 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRLAAKS*SCCVVP
Trigger: GGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAG...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCAATGCCATGTGGTCCTaGAGGAGGCTGGTGCCACTC +
Preference number: 2 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCNAMWS*RRLVPL
Trigger: GAGTGGCACCAGCCTCCTGCAGGACCACATGGCATT...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGAACCCCCTGCAGTGGGTaGACAGGTCTCACTGACAAA +
Preference number: 2 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRTPCSG*TGLTDK
Trigger: TTTGTCAGTGAGACCTGTGCACCCACTGCAGGGGGT...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGACGACGCAGCTATGGTTaGGGCCTATCATCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRRRSYG*GLSSPE
Trigger: CTCAGGAGATGATAGGCCCCAACCATAGCTGCGTCG...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGATGCTGTGTTGTGCCCTaGGGGCCACCCTGTGTGCAG +
Preference number: 2 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGCCVVP*GPPCVQ
Trigger: CTGCACACAGGGTGGCCCCCAGGGCACAACACAGCA...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCACGGGAATGGGGATGCTaGCAAATCTGGTATGAAGGT +
Preference number: 2 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPAREWGC*QIWYEG
Trigger: ACCTTCATACCAGATTTGCCAGCATCCCCATTCCCG...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGATTTCCCGGCCAGCACTaGCATTCCCGTTTGATGGAA +
Preference number: 2 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRFPGQH*HSRLME
Trigger: TTCCATCAAACGGGAATGTCAGTGCTGGCCGGGAAA...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACAGACCCTTCCCCTCCCTaGCACCTCAGTGATATGAAA +
Preference number: 2 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTDPSPP*HLSDMK
Trigger: TTTCATATCACTGAGGTGTCAGGGAGGGGAAGGGTC...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGACTCCCACCTCAAGCCTaGAACTTGGCAATGGAAATT +
Preference number: 2 (lower is better)
Translates to: DTKADLSRATWLCCGHHGLPPQA*NLAMEI
Trigger: AATTTCCATTGCCAAGTTGCAGGCTTGAGGTGGGAG...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCATGCAGTGTGAGGCTCTaGCTGCTAAGTCCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPCSVRL*LLSPAL
Trigger: AAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCA...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCAACACCAAGTTCTCTCTaGCTTGAGAGGCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPTPSSL*LERPHC
Trigger: GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGT...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCAGTTCAGATTTCTGCCTaGAAACCTGGAAATGCCATG +
Preference number: 2 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPAVQISA*KPGNAM
Trigger: CATGGCATTTCCAGGTTTCCAGGCAGAAATCTGAAC...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR GCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTCCCGACTCCATCCCTaGACACTGAGATTCAGAACA +
Preference number: 2 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCSRLHP*TLRFRT
Trigger: TGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGA...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp GGGGACCAGGGCCTCCTCAGGGAGCTCCCACCTCAAGCCTGCAACTaGGCAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACA +
Preference number: 2 (lower is better)
Translates to: GDQGLLRELPPQACN*AMEIYYKIPSAGNT
Trigger: TGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTGCCAAGTTGCAGGCTTGAGGTGGGAGCTCCCTGAGGAGGCCCTGGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAACATCGACGCAGCTATaGTTGGGGCCTATCATCTCC +
Preference number: 2 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGTSTQL*LGPIIS
Trigger: GGAGATGATAGGCCCCAACCATAGCTGCGTCGATGT...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCACAATATTCAGGGTCATaGTTCTTTCCCAATCAACAC +
Preference number: 2 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPAQYSGS*FFPNQH
Trigger: GTGTTGATTGGGAAAGAACCATGACCCTGAATATTG...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR TCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGTCCTCAGAGGCCCTTaGGGTTTCAGGCCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAVLRGP*GFRPRL
Trigger: CAGCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGAC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
3UTR-3UTR GCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCCCTTGGGCCATGACTTaGTGGTCCTCAGAGGCCCTT +
Preference number: 2 (lower is better)
Translates to: KFIIKYPQLATQQAQANVPWAMT*WSSEAL
Trigger: AAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
3UTR-3UTR GCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTTGCTAGGAAGAGAATaGCAATGTTCAGGTGCATCT +
Preference number: 2 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCLLGRE*QCSGAS
Trigger: AGATGCACCTGAACATTGGCATTCTCTTCCTAGCAA...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 90 bp CAAGAAATGTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTaGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAGGAAGATGT +
Preference number: 2 (lower is better)
Translates to: QEMSAVVSKHQVLSG*RGLTATQEHYGGRC
Trigger: ACATCTTCCTCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGACATTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTTaGAGGGCAACTGCCTCAAGGGAGGCCACCCCGGGC +
Preference number: 3 (lower is better)
Translates to: PRWGSQGASAGP*RATASREATPG
Trigger: GCCCGGGGTGGCCTCCCTTGAGGCAGTTGCCCTGCAAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTaGCCGCCCGCGGATGGGGTGCTGGCCGAACCTACC +
Preference number: 3 (lower is better)
Translates to: RDPVGGATLGEC*PPADGVLAEPT
Trigger: GGTAGGTTCGGCCAGCACCCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp ACTCACCTGGAGGTGCACCCTGTGCGCCTTCCCCACTaGACCCTCTGCGGGCAGGCGTGCCCTCCCGGATCC +
Preference number: 3 (lower is better)
Translates to: THLEVHPVRLPH*TLCGQACPPGS
Trigger: GGATCCGGGAGGGCACGCCTGCCCGCAGAGGGTGCAGTGGGGAAGGCGCACAGGGTGCACCTCCAGGTGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CCCCAGCCCGGCACTGGAGCCTTCCTGGCCCCAAGCTaGAGCGCCCAGTCCAGCCCTCCGTTTGGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: PQPGTGAFLAPS*SAQSSPPFGRS
Trigger: AGACCTGCCAAACGGAGGGCTGGACTGGGCGCTGCAGCTTGGGGCCAGGAAGGCTCCAGTGCCGGGCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp AAGAGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTaGTGCCCGCCCGCGGATGGGGTGCTGGCCGAACCT +
Preference number: 3 (lower is better)
Translates to: KRDPVGGATLGE*CPPADGVLAEP
Trigger: AGGTTCGGCCAGCACCCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CGTCAACATGGAGCGCCCAGCAGCGGCGGCGGGTCCTaGGCTGTGCTCCGGAGCCCTTCCCGGGATCATCTC +
Preference number: 3 (lower is better)
Translates to: RQHGAPSSGGGS*AVLRSPSRDHL
Trigger: GAGATGATCCCGGGAAGGGCTCCGGAGCACAGCCCAGGACCCGCCGCCGCTGCTGGGCGCTCCATGTTGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp GGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTaGTGGCAGCGACCAGCCATGCTGCCAGGAGTCGCC +
Preference number: 3 (lower is better)
Translates to: GCLSQLVGWPGA*WQRPAMLPGVA
Trigger: GGCGACTCCTGGCAGCATGGCTGGTCGCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp AGAGGGGCCCACTCCACCTGCACCGGAGGCAGCGGCTaGGGATGCTGGAGCATACGGCTCCAGCCACTCAGG +
Preference number: 3 (lower is better)
Translates to: RGAHSTCTGGSG*GCWSIRLQPLR
Trigger: CCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGTGCAGGTGGAGTGGGCCCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp GCCCACTCCACCTGCACCGGAGGCAGCGGCTGGGGATaGTGGAGCATACGGCTCCAGCCACTCAGGATCCCA +
Preference number: 3 (lower is better)
Translates to: AHSTCTGGSGWG*WSIRLQPLRIP
Trigger: TGGGATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGTGCAGGTGGAGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp GGCCCCAAGCTGCAGCGCCCAGTCCAGCCCTCCGTTTaGCAGGTCTGTTCCGGGAACTCCCCTGATCCACCC +
Preference number: 3 (lower is better)
Translates to: GPKLQRPVQPSV*QVCSGNSPDPP
Trigger: GGGTGGATCAGGGGAGTTCCCGGAACAGACCTGCCAAACGGAGGGCTGGACTGGGCGCTGCAGCTTGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CTTGTCCAACGGAGCCAGGCCAGTACCCGAGCCAGGTaGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCCGG +
Preference number: 3 (lower is better)
Translates to: LVQRSQASTRAR*SPSLGQGPLSR
Trigger: CCGGGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTGGCTCCGTTGGACAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CCGTGCAGCAGCTGTGCCCACCTAGGACCACAGGGCTaGTGGGGCTGGCAGCTTGGTAGAGGGCAGGTGCAC +
Preference number: 3 (lower is better)
Translates to: PCSSCAHLGPQG*WGWQLGRGQVH
Trigger: GTGCACCTGCCCTCTACCAAGCTGCCAGCCCCACCAGCCCTGTGGTCCTAGGTGGGCACAGCTGCTGCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp GGGGCAGCCGCCTGCCATCCACCCTGCTTGTGCCTTTaGCTGAAAGCACGAGGGCCAGGGGCCAACTCAGGG +
Preference number: 3 (lower is better)
Translates to: GAAACHPPCLCL*LKARGPGANSG
Trigger: CCCTGAGTTGGCCCCTGGCCCTCGTGCTTTCAGTCAAAGGCACAAGCAGGGTGGATGGCAGGCGGCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp GAGTCGCCTCTCAGGTTCATCCCAGGAGCTGCATGCTaGCCTTCGCGTGCTGCCTCCGGGCCACCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: ESPLRFIPGAAC*PSRAASGPPLL
Trigger: GAGGAGGGGTGGCCCGGAGGCAGCACGCGAAGGTCAGCATGCAGCTCCTGGGATGAACCTGAGAGGCGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CCGGAGCCCTTCCCGGGATCATCTCCCGGCATCGGCTaGCCCCTCGGTGTCTACGTGCCAAGCCCAATCTGC +
Preference number: 3 (lower is better)
Translates to: PEPFPGSSPGIG*PLGVYVPSPIC
Trigger: GCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATGATCCCGGGAAGGGCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp GGCAGGTCTGTTCCGGGAACTCCCCTGATCCACCCCTaGTCCGGCCACCTGGATCCCACACCCTTCCGATCC +
Preference number: 3 (lower is better)
Translates to: GRSVPGTPLIHP*SGHLDPTPFRS
Trigger: GGATCGGAAGGGTGTGGGATCCAGGTGGCCGGAGCAGGGGTGGATCAGGGGAGTTCCCGGAACAGACCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CTGCCAGGAGTCGCCTCTCAGGTTCATCCCAGGAGCTaGATGCTGACCTTCGCGTGCTGCCTCCGGGCCACC +
Preference number: 3 (lower is better)
Translates to: LPGVASQVHPRS*MLTFACCLRAT
Trigger: GGTGGCCCGGAGGCAGCACGCGAAGGTCAGCATGCAGCTCCTGGGATGAACCTGAGAGGCGACTCCTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGTaGTGGCCGAACCTACCTTGTAAAGTGGGGCTGCAC +
Preference number: 3 (lower is better)
Translates to: QRWVSAARPRMG*WPNLPCKVGLH
Trigger: GTGCAGCCCCACTTTACAAGGTAGGTTCGGCCAGCACCCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp GCCACCCAGATGCGGGCACGTGGCCCCGTTGTGCACTaGAGGGGTGAGGGCTGTGTTAGGCATGCAGGACTC +
Preference number: 3 (lower is better)
Translates to: ATQMRARGPVVH*RGEGCVRHAGL
Trigger: GAGTCCTGCATGCCTAACACAGCCCTCACCCCTCCAGTGCACAACGGGGCCACGTGCCCGCATCTGGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CACTCCACCTGCACCGGAGGCAGCGGCTGGGGATGCTaGAGCATACGGCTCCAGCCACTCAGGATCCCACTC +
Preference number: 3 (lower is better)
Translates to: HSTCTGGSGWGC*SIRLQPLRIPL
Trigger: GAGTGGGATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGTGCAGGTGGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGTGCTaGCCGAACCTACCTTGTAAAGTGGGGCTGCACAGA +
Preference number: 3 (lower is better)
Translates to: RWVSAARPRMGC*PNLPCKVGLHR
Trigger: TCTGTGCAGCCCCACTTTACAAGGTAGGTTCGGCCAGCACCCCATCCGCGGGCGGGCAGCACTCACCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCGCTGTGACTGTGGCCTaGGCCACTGTGAGGCGGTGC +
Preference number: 3 (lower is better)
Translates to: HLPASADPSVSTCQAQSAAVTVA*ATVRRC
Trigger: GCACCGCCTCACAGTGGCCAAGGCCACAGTCACAGC...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp GCTCTTGCTGTGTTGTGCCCTGGGGGCCACCCTGTGTaGAGCCGCAGCTGTGACTGTGGCCTTGGCCACTGT +
Preference number: 3 (lower is better)
Translates to: ALAVLCPGGHPV*SRSCDCGLGHC
Trigger: ACAGTGGCCAAGGCCACAGTCACAGCTGCGGCTGCACACAGGGTGGCCCCCAGGGCACAACACAGCAAGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp TACCCCACGGCGGCTGGCCATGTCCACTTCACTCAGTaGAGCCACCCTCAGGCTGTAATCCAGCCCCCACCC +
Preference number: 3 (lower is better)
Translates to: YPTAAGHVHFTQ*SHPQAVIQPPP
Trigger: GGGTGGGGGCTGGATTACAGCCTGAGGGTGGCTGCACTGAGTGAAGTGGACATGGCCAGCCGCCGTGGGGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp GACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCTaGAGGGACACCCACTGCCAGAGGCGGAGGCAGGTT +
Preference number: 3 (lower is better)
Translates to: DPSVSTCQAQSA*RDTHCQRRRQV
Trigger: AACCTGCCTCCGCCTCTGGCAGTGGGTGTCCCTGCAGGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTaGCAAGCCCAATCTGCCTGCAGGGACACCCACTGC +
Preference number: 3 (lower is better)
Translates to: HLPASADPSVST*QAQSACRDTHC
Trigger: GCAGTGGGTGTCCCTGCAGGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp GGCTCTTCCGGCAATCCGGGCAGACACAGGCGTGTGTaGTCCCAGCTTCTCTGGATCTGCCCATGGGCCCCA +
Preference number: 3 (lower is better)
Translates to: GSSGNPGRHRRV*SQLLWICPWAP
Trigger: TGGGGCCCATGGGCAGATCCAGAGAAGCTGGGACCACACACGCCTGTGTCTGCCCGGATTGCCGGAAGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CCTTGGAAGCCCTCCTCGGCTGTACCCCACGGCGGCTaGCCATGTCCACTTCACTCAGTGCAGCCACCCTCA +
Preference number: 3 (lower is better)
Translates to: PWKPSSAVPHGG*PCPLHSVQPPS
Trigger: TGAGGGTGGCTGCACTGAGTGAAGTGGACATGGCCAGCCGCCGTGGGGTACAGCCGAGGAGGGCTTCCAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CAGCCGCCTGCCATCCACCCTGCTTGTGCCTTTGACTaGAAGCACGAGGGCCAGGGGCCAACTCAGGGTCTG +
Preference number: 3 (lower is better)
Translates to: QPPAIHPACAFD*KHEGQGPTQGL
Trigger: CAGACCCTGAGTTGGCCCCTGGCCCTCGTGCTTTCAGTCAAAGGCACAAGCAGGGTGGATGGCAGGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp GTGCTTGTCACACTCCCTTGCTGCTCTCGTGCCTTCTaGCCAGCACTCACCTGGAGGTGCACCCTGTGCGCC +
Preference number: 3 (lower is better)
Translates to: VLVTLPCCSRAF*PALTWRCTLCA
Trigger: GGCGCACAGGGTGCACCTCCAGGTGAGTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp AGGCTCTGGCTGCTAAGTCCTGCTCTTGCTGTGTTGTaGCCTGGGGGCCACCCTGTGTGCAGCCGCAGCTGT +
Preference number: 3 (lower is better)
Translates to: RLWLLSPALAVL*PGGHPVCSRSC
Trigger: ACAGCTGCGGCTGCACACAGGGTGGCCCCCAGGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CAGCAGGCAGTGCCACTCGCCAACCTCATGCTGGCATaGACACCTGGGCCCTCATGTGGGATACCCACCTCG +
Preference number: 3 (lower is better)
Translates to: QQAVPLANLMLA*TPGPSCGIPTS
Trigger: CGAGGTGGGTATCCCACATGAGGGCCCAGGTGTGCATGCCAGCATGAGGTTGGCGAGTGGCACTGCCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp GTTCATCCCAGGAGCTGCATGCTGACCTTCGCGTGCTaGCTCCGGGCCACCCCTCCTCCCCACTTAATGCCT +
Preference number: 3 (lower is better)
Translates to: VHPRSCMLTFAC*LRATPPPHLMP
Trigger: AGGCATTAAGTGGGGAGGAGGGGTGGCCCGGAGGCAGCACGCGAAGGTCAGCATGCAGCTCCTGGGATGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp GCCAGGCTGGGCCCGGCTGCATGCAGTGTGAGGCTCTaGCTGCTAAGTCCTGCTCTTGCTGTGTTGTGCCCT +
Preference number: 3 (lower is better)
Translates to: ARLGPAACSVRL*LLSPALAVLCP
Trigger: AGGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCATGCAGCCGGGCCCAGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CGCGGATGGGGTGCTGGCCGAACCTACCTTGTAAAGTaGGGCTGCACAGAGGTCAGCACATGGTGGCGCCCA +
Preference number: 3 (lower is better)
Translates to: RGWGAGRTYLVK*GCTEVSTWWRP
Trigger: TGGGCGCCACCATGTGCTGACCTCTGTGCAGCCCCACTTTACAAGGTAGGTTCGGCCAGCACCCCATCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCGGGAGGATCGATCGCTaGAGCCCAGGAGTTCGAAAC +
Preference number: 3 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRIGRIDR*SPGVRN
Trigger: GTTTCGAACTCCTGGGCTCAAGCGATCGATCCTCCC...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGACCCCATCCCCAGGCCTaGGAAGCCCTCCTCGGCTGT +
Preference number: 3 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRPHPQA*EALLGC
Trigger: ACAGCCGAGGAGGGCTTCCAAGGCCTGGGGATGGGG...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CAAGCTTGGGCCAGGGGCCGCTTTCCCGGCCAGCACTaGCATTCCCGTTTGATGGAACGGTCCCCATGGTAC +
Preference number: 3 (lower is better)
Translates to: QAWARGRFPGQH*HSRLMERSPWY
Trigger: GTACCATGGGGACCGTTCCATCAAACGGGAATGTCAGTGCTGGCCGGGAAAGCGGCCCCTGGCCCAAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CTTGGCCACTGTGAGGCGGTGCTTGTCACACTCCCTTaGTGCTCTCGTGCCTTCTGCCCAGCACTCACCTGG +
Preference number: 3 (lower is better)
Translates to: LGHCEAVLVTLP*CSRAFCPALTW
Trigger: CCAGGTGAGTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGCACCGCCTCACAGTGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp TGTGATGAGCACCCAGGGCACAGCTCCCTCAGCACCTaGAGTCACTGCAGCCTAAACCCAGGACCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: CDEHPGHSSLST*SHCSLNPGPFP
Trigger: GGGGAAGGGTCCTGGGTTTAGGCTGCAGTGACTGCAGGTGCTGAGGGAGCTGTGCCCTGGGTGCTCATCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CAGCGGGGACTCCATGGTCCTTGGGCCATGACTTGCTaGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGC +
Preference number: 3 (lower is better)
Translates to: QRGLHGPWAMTC*SSEALEVSGQG
Trigger: GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
3UTR CCA 72 bp CCTGATCCTGGCCTCAACCTGTGTGTTGGGAGCTCCTaGCCTCCTCGGGGTGAGGGGTCATGTGGACATCGA +
Preference number: 3 (lower is better)
Translates to: PDPGLNLCVGSS*PPRGEGSCGHR
Trigger: TCGATGTCCACATGACCCCTCACCCCGAGGAGGCCAGGAGCTCCCAACACACAGGTTGAGGCCAGGATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CCGGGCAGACACAGGCGTGTGTGGTCCCAGCTTCTCTaGATCTGCCCATGGGCCCCACTCCAATATTCAGGG +
Preference number: 3 (lower is better)
Translates to: PGRHRRVWSQLL*ICPWAPLQYSG
Trigger: CCCTGAATATTGGAGTGGGGCCCATGGGCAGATCCAGAGAAGCTGGGACCACACACGCCTGTGTCTGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CAACCTCATGCTGGCATGCACACCTGGGCCCTCATGTaGGATACCCACCTCGTGGCTGTGGGACGTAGGGAG +
Preference number: 3 (lower is better)
Translates to: QPHAGMHTWALM*DTHLVAVGRRE
Trigger: CTCCCTACGTCCCACAGCCACGAGGTGGGTATCCCACATGAGGGCCCAGGTGTGCATGCCAGCATGAGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp AGTGCCACTCGCCAACCTCATGCTGGCATGCACACCTaGGCCCTCATGTGGGATACCCACCTCGTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: SATRQPHAGMHT*ALMWDTHLVAV
Trigger: CACAGCCACGAGGTGGGTATCCCACATGAGGGCCCAGGTGTGCATGCCAGCATGAGGTTGGCGAGTGGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCAGGGCTGCACTGCTCTaGGCCGGCTTGGACCCCAGC +
Preference number: 3 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCRAALL*AGLDPS
Trigger: GCTGGGGTCCAAGCCGGCCAAGAGCAGTGCAGCCCT...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCACGACCCAGGTTCTGTaGACACAAAGGCCGACCTGT +
Preference number: 3 (lower is better)
Translates to: HLPASADPSVSTCQAQSATTQVL*TQRPTC
Trigger: ACAGGTCGGCCTTTGTGTCAACAGAACCTGGGTCGT...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp GGGGCCGCTTTCCCGGCCAGCACTGACATTCCCGTTTaGTGGAACGGTCCCCATGGTACCTCTGACCAACAG +
Preference number: 3 (lower is better)
Translates to: GAAFPASTDIPV*WNGPHGTSDQQ
Trigger: CTGTTGGTCAGAGGTACCATGGGGACCGTTCCATCAAACGGGAATGTCAGTGCTGGCCGGGAAAGCGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp TACGGCTCCAGCCACTCAGGATCCCACTCTGGGCCGTaGAAGTTACTCCACAGAACACCCCAAGGCCACCCC +
Preference number: 3 (lower is better)
Translates to: YGSSHSGSHSGP*KLLHRTPQGHP
Trigger: GGGGTGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAGTGGCTGGAGCCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CACAAGGCGGGAATGGGGATGCTGGCAAATCTGGTATaGAGGTTGAGACCCCGAGGAGAGGCAGGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: HKAGMGMLANLV*RLRPRGEAGLG
Trigger: CCCCAGGCCTGCCTCTCCTCGGGGTCTCAACCTTCATACCAGATTTGCCAGCATCCCCATTCCCGCCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp TGGGAGCCAAGCCACAGCTCGCTGACCTGGGGAAGCTaGCAGAGTGACAGAGGGTCTCAAGGACTCTCCACC +
Preference number: 3 (lower is better)
Translates to: WEPSHSSLTWGS*QSDRGSQGLST
Trigger: GGTGGAGAGTCCTTGAGACCCTCTGTCACTCTGTCAGCTTCCCCAGGTCAGCGAGCTGTGGCTTGGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp GCAGCTGTGACTGTGGCCTTGGCCACTGTGAGGCGGTaGTTGTCACACTCCCTTGCTGCTCTCGTGCCTTCT +
Preference number: 3 (lower is better)
Translates to: AAVTVALATVRR*LSHSLAALVPS
Trigger: AGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGCACCGCCTCACAGTGGCCAAGGCCACAGTCACAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp ATGCAGTGTGAGGCTCTGGCTGCTAAGTCCTGCTCTTaGTGTGTTGTGCCCTGGGGGCCACCCTGTGTGCAG +
Preference number: 3 (lower is better)
Translates to: MQCEALAAKSCS*CVVPWGPPCVQ
Trigger: CTGCACACAGGGTGGCCCCCAGGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp TCAACTGATGCTTTCCTATGTGGACTTCCCGGCCAGTaGTGTGGGACCTCCCCTGTAGGGCTGGCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: STDAFLCGLPGQ*CGTSPVGLASL
Trigger: GAGGCTGGCCAGCCCTACAGGGGAGGTCCCACAGCACTGGCCGGGAAGTCCACATAGGAAAGCATCAGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp GACATCAGCAGGCAGTGCCACTCGCCAACCTCATGCTaGCATGCACACCTGGGCCCTCATGTGGGATACCCA +
Preference number: 3 (lower is better)
Translates to: DISRQCHSPTSC*HAHLGPHVGYP
Trigger: TGGGTATCCCACATGAGGGCCCAGGTGTGCATGCCAGCATGAGGTTGGCGAGTGGCACTGCCTGCTGATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CCCAGGACCCTTCCCCTCCCTGACACCTCAGTGATATaGAAATACCTCCCGGAGTGCCCTACGCATCCTGGC +
Preference number: 3 (lower is better)
Translates to: PRTLPLPDTSVI*KYLPECPTHPG
Trigger: GCCAGGATGCGTAGGGCACTCCGGGAGGTATTTTCATATCACTGAGGTGTCAGGGAGGGGAAGGGTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp AAGCCACAGCTCGCTGACCTGGGGAAGCTGACAGAGTaGCAGAGGGTCTCAAGGACTCTCCACCCACAAGGC +
Preference number: 3 (lower is better)
Translates to: KPQLADLGKLTE*QRVSRTLHPQG
Trigger: GCCTTGTGGGTGGAGAGTCCTTGAGACCCTCTGTCACTCTGTCAGCTTCCCCAGGTCAGCGAGCTGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTaGTGTGGACACCACGGAGCAGCTCAAGAGAGGAAC +
Preference number: 3 (lower is better)
Translates to: DTKADLSRATWL*CGHHGAAQERN
Trigger: GTTCCTCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp GGTGAGGGGTCATGTGGACATCGACGCAGCTATGGTTaGGGCCTATCATCTCCTGAGGCCTGGCCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: GEGSCGHRRSYG*GLSSPEAWPRK
Trigger: TTTCCTGGGCCAGGCCTCAGGAGATGATAGGCCCCAACCATAGCTGCGTCGATGTCCACATGACCCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp AAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTaGACACCACGGAGCAGCTCAAGAGAGGAACAGGAC +
Preference number: 3 (lower is better)
Translates to: KGRPVQSHMALL*TPRSSSREEQD
Trigger: GTCCTGTTCCTCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp AGCCCAAGTCAGGAGGTCAAGTGTGCATGCAAGAGGTaGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: SPSQEVKCACKR*QGTDVLLFPGH
Trigger: GTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCACACTTGACCTCCTGACTTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGAGCTTGTCACACTCCCTaGCTGCTCTCGTGCCTTCTG +
Preference number: 3 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRACHTP*LLSCLL
Trigger: CAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGC...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGAGCATCGGCAGGGCCTaGCAGGGCAACTGCCTCAAG +
Preference number: 3 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWSIGRA*QGNCLK
Trigger: CTTGAGGCAGTTGCCCTGCAAGGCCCTGCCGATGCT...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCATCACTGCTGGCTCTGTaGGCGTTCCTGCCAGCCTAC +
Preference number: 3 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPSLLAL*AFLPAY
Trigger: GTAGGCTGGCAGGAACGCCAACAGAGCCAGCAGTGA...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGACTGCTCTTGGCCGGCTaGGACCCCAGCACCGGTTCT +
Preference number: 3 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGLLLAG*DPSTGS
Trigger: AGAACCGGTGCTGGGGTCCAAGCCGGCCAAGAGCAG...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCAAGGCAGGAGAATCGCTaGAACCTGGGAATCAGAGGT +
Preference number: 3 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPARQENR*NLGIRG
Trigger: ACCTCTGATTCCCAGGTTCAAGCGATTCTCCTGCCT...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CCGTTGTCCCCATCGTCCGTGGCTTCATCCCTCAACTaGTGCTTTCCTATGTGGACTTCCCGGCCAGTGCTG +
Preference number: 3 (lower is better)
Translates to: PLSPSSVASSLN*CFPMWTSRPVL
Trigger: CAGCACTGGCCGGGAAGTCCACATAGGAAAGCATCAGTTGAGGGATGAAGCCACGGACGATGGGGACAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp AGACACAGGCGTGTGTGGTCCCAGCTTCTCTGGATCTaGCCATGGGCCCCACTCCAATATTCAGGGTCATGG +
Preference number: 3 (lower is better)
Translates to: RHRRVWSQLLWI*PWAPLQYSGSW
Trigger: CCATGACCCTGAATATTGGAGTGGGGCCCATGGGCAGATCCAGAGAAGCTGGGACCACACACGCCTGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp TCTGTTGACACAAAGGCCGACCTGTCCAGAGCCACATaGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: SVDTKADLSRAT*LCCGHHGAAQE
Trigger: CTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTCAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp TGGAGCATACGGCTCCAGCCACTCAGGATCCCACTCTaGGCCGTGAAAGTTACTCCACAGAACACCCCAAGG +
Preference number: 3 (lower is better)
Translates to: WSIRLQPLRIPL*AVKVTPQNTPR
Trigger: CCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAGTGGCTGGAGCCGTATGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATaGAGGGAAACTGCAAAGCCAATTCCCACTCCACCT +
Preference number: 3 (lower is better)
Translates to: GADVPLARLSRA*RETAKPIPTPP
Trigger: AGGTGGAGTGGGAATTGGCTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp ACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTaGCTGGACACTGCTCAACGCCACATGGCCTGGGGC +
Preference number: 3 (lower is better)
Translates to: TPSLHTEIQNKM*LDTAQRHMAWG
Trigger: GCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp GGAAATACCAACCTCATGAAGACAGCGGGGACTCCATaGTCCTTGGGCCATGACTTGCTGGTCCTCAGAGGC +
Preference number: 3 (lower is better)
Translates to: GNTNLMKTAGTP*SLGHDLLVLRG
Trigger: GCCTCTGAGGACCAGCAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGTCTTCATGAGGTTGGTATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
3UTR CCA 72 bp AAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATaGGGATGTCAGAACCTGACACCTTCCCTCACTGTG +
Preference number: 3 (lower is better)
Translates to: KPIPTPPTLPLS*GCQNLTPSLTV
Trigger: CACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CCTCACTGCTACCCAAGAGCATTATGGAGGAAGATGTaGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCA +
Preference number: 3 (lower is better)
Translates to: PHCYPRALWRKM*KGCLSQLVGWP
Trigger: TGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACATCTTCCTCCATAATGCTCTTGGGTAGCAGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CTAAACCCAGGACCCTTCCCCTCCCTGACACCTCAGTaGTATGAAAATACCTCCCGGAGTGCCCTACGCATC +
Preference number: 3 (lower is better)
Translates to: LNPGPFPSLTPQ*YENTSRSALRI
Trigger: GATGCGTAGGGCACTCCGGGAGGTATTTTCATATCACTGAGGTGTCAGGGAGGGGAAGGGTCCTGGGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CAGGACTCACGCTGTCCCGACTCCATCCCTGCACACTaGGATTCAGAACAAGATGTGCCTGGACACTGCTCA +
Preference number: 3 (lower is better)
Translates to: QDSRCPDSIPAH*DSEQDVPGHCS
Trigger: TGAGCAGTGTCCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGTGAGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CAGACGCATGGTGATTCATCACGACCCAGGTTCTGTTaGCACAAAGGCCGACCTGTCCAGAGCCACATGGCT +
Preference number: 3 (lower is better)
Translates to: QTHGDSSRPRFC*HKGRPVQSHMA
Trigger: AGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTCAACAGAACCTGGGTCGTGATGAATCACCATGCGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp AGGCATGCAGGACTCACGCTGTCCCGACTCCATCCCTaGACACTGAGATTCAGAACAAGATGTGCCTGGACA +
Preference number: 3 (lower is better)
Translates to: RHAGLTLSRLHP*TLRFRTRCAWT
Trigger: TGTCCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGTGAGTCCTGCATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp CTTAGCACACCCTGTGGCCGTTGTCCCCATCGTCCGTaGCTTCATCCCTCAACTGATGCTTTCCTATGTGGA +
Preference number: 3 (lower is better)
Translates to: LSTPCGRCPHRP*LHPSTDAFLCG
Trigger: TCCACATAGGAAAGCATCAGTTGAGGGATGAAGCCACGGACGATGGGGACAACGGCCACAGGGTGTGCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp GCTTCTTGGCAGAGACACAGGTGGGAAACACCTGATTaGACATCATTGCCTGGGGAGTGGAGACACGCACAG +
Preference number: 3 (lower is better)
Translates to: ASWQRHRWETPD*TSLPGEWRHAQ
Trigger: CTGTGCGTGTCTCCACTCCCCAGGCAATGATGTTCAATCAGGTGTTTCCCACCTGTGTCTCTGCCAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CACACATGTTCAGATTTCTGCCTGGAAACCTGGAAATaGCATGTGGTCCTGCAGGAGGCTGGTGCCACTCTC +
Preference number: 3 (lower is better)
Translates to: HTCSDFCLETWK*HVVLQEAGATL
Trigger: GAGAGTGGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATCTGAACATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CACCCTTCCGATCCGTCCCACACATGTTCAGATTTCTaGCTGGAAACCTGGAAATGCCATGTGGTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: HPSDPSHTCSDF*LETWKCHVVLQ
Trigger: CTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATCTGAACATGTGTGGGACGGATCGGAAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp ACAGATGTGCTGCTGTTCCCAGGCCACCTGCACAGCTaGATGGTGGAAGCAGTTCACTTAAAGGCCATGAGT +
Preference number: 3 (lower is better)
Translates to: TDVLLFPGHLHS*MVEAVHLKAMS
Trigger: ACTCATGGCCTTTAAGTGAACTGCTTCCACCATCCAGCTGTGCAGGTGGCCTGGGAACAGCAGCACATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR TCA 72 bp CTGTTGTGGGGGTTTCAAGGCTGGTCAGACGCATGGTaGTTCATCACGACCCAGGTTCTGTTGACACAAAGG +
Preference number: 3 (lower is better)
Translates to: LLWGFQGWSDAW*FITTQVLLTQR
Trigger: CCTTTGTGTCAACAGAACCTGGGTCGTGATGAATCACCATGCGTCTGACCAGCCTTGAAACCCCCACAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp AGAGACACAGGTGGGAAACACCTGATTGAACATCATTaGCTGGGGAGTGGAGACACGCACAGCACGTCAACA +
Preference number: 3 (lower is better)
Translates to: RDTGGKHLIEHH*LGSGDTHSTST
Trigger: TGTTGACGTGCTGTGCGTGTCTCCACTCCCCAGGCAATGATGTTCAATCAGGTGTTTCCCACCTGTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp ATCTGCCCATGGGCCCCACTCCAATATTCAGGGTCATaGTTCTTTCCCAATCAACACCCGCTTTTAGGAGGA +
Preference number: 3 (lower is better)
Translates to: ICPWAPLQYSGS*FFPNQHPLLGG
Trigger: TCCTCCTAAAAGCGGGTGTTGATTGGGAAAGAACCATGACCCTGAATATTGGAGTGGGGCCCATGGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp TTGTGCAAACACTCCTTTTGTGCAGAGGGTGTTCTGTaGCTTCTTGGCAGAGACACAGGTGGGAAACACCTG +
Preference number: 3 (lower is better)
Translates to: LCKHSFCAEGVL*LLGRDTGGKHL
Trigger: CAGGTGTTTCCCACCTGTGTCTCTGCCAAGAAGCCACAGAACACCCTCTGCACAAAAGGAGTGTTTGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR-3UTR CAA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGCCTCAAGCCTGCAACTaGGCAATGGAAATTTATTAT +
Preference number: 3 (lower is better)
Translates to: GADVPLARLSRACRETAKPQACN*AMEIYY
Trigger: ATAATAAATTTCCATTGCCAAGTTGCAGGCTTGAGG...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTaGTACCCAAGAGCATTATGGAGGAAGATGTGGAAG +
Preference number: 3 (lower is better)
Translates to: QTPSSLWLERPH*YPRALWRKMWK
Trigger: CTTCCACATCTTCCTCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp AATGTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTaGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTA +
Preference number: 3 (lower is better)
Translates to: NVRRCFQTPSSL*LERPHCYPRAL
Trigger: TAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR GCA 72 bp CAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATaGCAATGTTCAGGTGCATCTTTTCCAAGCTGGATG +
Preference number: 3 (lower is better)
Translates to: QPTGSGCLLGRE*QCSGASFPSWM
Trigger: CATCCAGCTTGGAAAAGATGCACCTGAACATTGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CCA 72 bp AGAGAATGCCAATGTTCAGGTGCATCTTTTCCAAGCTaGATGTCTGGAGCTGAGACCGTTTCTTCTTCTGTT +
Preference number: 3 (lower is better)
Translates to: RECQCSGASFPS*MSGAETVSSSV
Trigger: AACAGAAGAAGAAACGGTCTCAGCTCCAGACATCCAGCTTGGAAAAGATGCACCTGAACATTGGCATTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGGTCCCGGCCCTGACTaGGGAGCTGGCGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RDPVGGATLGECCPPADGGPGPD*GAGAPG
Trigger: CCCAGGGGCGCCAGCTCCTCAGTCAGGGCCGGGACC...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGACGACCGGCCAGGCTaGGCCCGGCTGCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: RDPVGGATLGECCPPADGDDRPG*ARLHAV
Trigger: CACTGCATGCAGCCGGGCCCAGCCTGGCCGGTCGTC...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 72 bp GCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTaGCAGGGCAACTGCCTCAAGGGAGGCCACCCCGGG +
Preference number: 4 (lower is better)
Translates to: AQVGVPRSIGRA*QGNCLKGGHPG
Trigger: CCCGGGGTGGCCTCCCTTGAGGCAGTTGCCCTGCAAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGCACCCCTGCTGGCTGTaGAGACACCACCAGGCGGAC +
Preference number: 4 (lower is better)
Translates to: RDPVGGATLGECCPPADGHPCWL*RHHQAD
Trigger: GTCCGCCTGGTGGTGTCTTCACAGCCAGCAGGGGTG...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGCCTGGGTGACAGAGTaGGACCCCCACTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RDPVGGATLGECCPPADGAWVTE*DPHCPW
Trigger: CCAGGGACAGTGGGGGTCTCACTCTGTCACCCAGGC...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCGGGGCCCACTCCACCTaGACCGGAGGCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSGAHST*TGGSGW
Trigger: CCAGCCGCTGCCTCCGGTGCAGGTGGAGTGGGCCCC...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGCCTGACGCAGCCTTGTaGGGCCCTGAGCAGAGGACC +
Preference number: 4 (lower is better)
Translates to: RDPVGGATLGECCPPADGPDAAL*GPEQRT
Trigger: GGTCCTCTGCTCAGGGCCCCACAAGGCTGCGTCAGG...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCGGCCCCCGGCCAGGATaGTGCTCCGGCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSGPRPG*CSGRSP
Trigger: TGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCC...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCGGCAAGCGTCCAGCGTaGCTGGCCCCCGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSGKRPA*LAPGQD
Trigger: ATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCC...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCGCCACTCTGAGACCCTaGGAAGAGGAGCGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSATLRP*EEERAP
Trigger: GGGCGCCCGCTCCTCTTCTCAGGGTCTCAGAGTGGC...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCCCACGACAGCGCTCCTaGCCTCCGCGAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSPRQRS*PPRGPT
Trigger: TGTGGGACCTCGCGGAGGGCAGGAGCGCTGTCGTGG...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCGGAGTGGGCGGGAGCTaGAGTCGGCCTGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSGVGGS*SRPATA
Trigger: GGCTGTGGCAGGCCGACTGCAGCTCCCGCCCACTCC...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCGCGGTGGTCCCAGCCTaGGGTGGCCAGGATCTTGCG +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSAVVPA*GGQDLA
Trigger: CGCAAGATCCTGGCCACCGCAGGCTGGGACCACCGC...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCGGCAAGCGTCCAGCGTaGCTGGCCCCCGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSGKRPA*LAPGQD
Trigger: ATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCC...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCGGCCAGCACGGCCAGTaGCTGCATCGTCCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSGQHGQ*LHRPPV
Trigger: CACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCC...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCGGCCAGCACGGCCAGTaGCTGCATCGTCCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSGQHGQ*LHRPPV
Trigger: CACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCC...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGGCCAAGGCTGGGGCCTaGTGCCCACCTCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARAKAGA*CPPPCP
Trigger: CGGGCAGGGAGGTGGGCATCAGGCCCCAGCCTTGGC...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCGCGGTGGTCCCAGCCTaGGGTGGCCAGGATCTTGCG +
Preference number: 4 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRIAVVPA*GGQDLA
Trigger: CGCAAGATCCTGGCCACCGCAGGCTGGGACCACCGC...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCTGGAGGTGCACCCTGTaGGCCTTCCCCACTGCACCC +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSWRCTL*AFPTAP
Trigger: GGGTGCAGTGGGGAAGGCGCACAGGGTGCACCTCCA...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCGACAAACTGGGGGTCTaGAGGTGGCGGCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRIDKLGV*RWRRAG
Trigger: CCCTGCCCGCCGCCACCTCCAGACCCCCAGTTTGTC...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGAGCGGCGGCGGGTCCTaGGCTGTGCTCCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRSGGGS*AVLRSP
Trigger: AGGGCTCCGGAGCACAGCCCAGGACCCGCCGCCGCT...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 72 bp AGCCAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTaGGGCCAGGGGCCGCTTTCCCGGCCAGCACTGACA +
Preference number: 4 (lower is better)
Translates to: SQASTRARWSPS*GQGPLSRPALT
Trigger: TGTCAGTGCTGGCCGGGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGGGAAGCTGACAGAGTaGCAGAGGGTCTCAAGGACT +
Preference number: 4 (lower is better)
Translates to: RDPVGGATLGECCPPADGGKLTE*QRVSRT
Trigger: AGTCCTTGAGACCCTCTGTCACTCTGTCAGCTTCCC...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCGGCAGGGGGCCGTCATaGTGGGCAGGATGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSGRGPS*WAGCSY
Trigger: GTAACTGCATCCTGCCCAGCATGACGGCCCCCTGCC...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCGGCCCCCGGCCAGGATaGTGCTCCGGCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSGPRPG*CSGRSP
Trigger: TGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCC...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCGCCCAGCTTGGCATCTaGCTTCGGCTTCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSAQLGI*LRLQGA
Trigger: TGCGCCCTGAAGCCGAAGGCAGATGCCAAGCTGGGC...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCGCATCGGCAGGGCCTTaGAGGGCAACTGCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSASAGP*RATASR
Trigger: CCTTGAGGCAGTTGCCCTGCAAGGCCCTGCCGATGC...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGGTCCACTTCACTCAGTaGAGCCACCCTCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: RDPVGGATLGECCPPADGVHFTQ*SHPQAV
Trigger: TACAGCCTGAGGGTGGCTGCACTGAGTGAAGTGGAC...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AGGGACCCTGTTGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCGCGGATGGGCTGGGAATCAGAGGTTaGAGTGAGCCGAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: RDPVGGATLGECCPPADGLGIRG*SEPRLL
Trigger: GAGCAGTCTCGGCTCACTGCAACCTCTGATTCCCAG...CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCACGCTGGGTGAGTGCTaGCCGCCCGCGGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSTLGEC*PPADGV
Trigger: CACCCCATCCGCGGGCGGGCAGCACTCACCCAGCGT...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGGCAACGCTGGGTGAGTaGTGCCCGCCCGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARATLGE*CPPADG
Trigger: CCCATCCGCGGGCGGGCAGCACTCACCCAGCGTTGC...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCAGCCAGGTCACACACTaGCCGCCGTGGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRISQVTH*PPWPSR
Trigger: CCTGGATGGCCACGGCGGCCAGTGTGTGACCTGGCT...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAAGGAGCTGGCGCCCCTaGGGCAGCGTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHARSWRP*GSVCSQ
Trigger: CTGGCTGCAGACGCTGCCCCAGGGGCGCCAGCTCCT...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAGCTGGCGCCCCTaGGGCAGCGTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKRSWRP*GSVCSQ
Trigger: CTGGCTGCAGACGCTGCCCCAGGGGCGCCAGCTCCT...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCCCCATCCCCAGGCCTTaGAAGCCCTCCTCGGCTGTA +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSPIPRP*KPSSAV
Trigger: TACAGCCGAGGAGGGCTTCCAAGGCCTGGGGATGGG...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCCCAGATGCGGGCACGTaGCCCCGTTGTGCACTGGAG +
Preference number: 4 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRIPDAGT*PRCALE
Trigger: CTCCAGTGCACAACGGGGCCACGTGCCCGCATCTGG...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCGAGGTCAGCACATGGTaGCGCCCACCGTCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSEVSTW*RPPSRG
Trigger: CCCTCTCGACGGTGGGCGCCACCATGTGCTGACCTC...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACTGCCCGCCCGCGGATaGGGTGCTGGCCGAACCTAC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKLPARG*GAGRTY
Trigger: GTAGGTTCGGCCAGCACCCCATCCGCGGGCGGGCAG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 72 bp GCTCTAGGCACAGCTGCTTGTCTAAGAGGGACCCTGTaGGCGGCGCAACGCTGGGTGAGTGCTGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: ALGTAACLRGTL*AAQRWVSAARP
Trigger: CGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAACAGGGTCCCTCTTAGACAAGCAGCTGTGCCTAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCACAGCGCATGCACCGGTaGCTGGGTGCCTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHAQRMHR*LGASED
Trigger: GTCCTCCGAGGCACCCAGTCACCGGTGCATGCGCTG...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACAGCGCATGCACCGGTaGCTGGGTGCCTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKQRMHR*LGASED
Trigger: GTCCTCCGAGGCACCCAGTCACCGGTGCATGCGCTG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGGTCCCGGCCCTGACTaGGGAGCTGGCGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNGPGPD*GAGAPG
Trigger: CCCAGGGGCGCCAGCTCCTCAGTCAGGGCCGGGACC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCGTCCTCAGAGGCCCTTaGGGTTTCAGGCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSVLRGP*GFRPRL
Trigger: CAGCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGAC...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCCCAGGAGCTGCATGCTaGCCTTCGCGTGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLPASADPSVSTCQAQSAPGAAC*PSRAAS
Trigger: GGAGGCAGCACGCGAAGGTCAGCATGCAGCTCCTGG...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGGGTTGGCCAGGGGCGTaGTGGCAGCGACCAGCCATG +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRGWPGA*WQRPAM
Trigger: CATGGCTGGTCGCTGCCATCACGCCCCTGGCCAACC...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAGCCGCGCTGCCACCCTaGCGCAGCCTTGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKAALPP*RSLVGP
Trigger: GGGCCCCACAAGGCTGCGTCAGGGTGGCAGCGCGGC...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCGGAGTGGGCGGGAGCTaGAGTCGGCCTGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGGVGGS*SRPATA
Trigger: GGCTGTGGCAGGCCGACTGCAGCTCCCGCCCACTCC...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCGCACTCACCTGGAGGTaGACCCTGTGCGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HLPASADPSVSTCQAQSAALTWR*TLCAFP
Trigger: GGGGAAGGCGCACAGGGTGCACCTCCAGGTGAGTGC...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCGTCCCTGCACACAGCTaGCCACCGGCCAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: HLPASADPSVSTCQAQSAVPAHS*PPASGV
Trigger: CACTCCACTGGCCGGTGGGCAGCTGTGTGCAGGGAC...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCACCGTGCAGCAGCTGTaGCCACCTAGGACCACAGGG +
Preference number: 4 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSTVQQL*PPRTTG
Trigger: CCCTGTGGTCCTAGGTGGGCACAGCTGCTGCACGGT...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCAGGAGCTGGCGCCCCTaGGGCAGCGTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGRSWRP*GSVCSQ
Trigger: CTGGCTGCAGACGCTGCCCCAGGGGCGCCAGCTCCT...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGGGGAGGCACGGCCTTaGGACCCCCTGCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGGEARP*DPLQWV
Trigger: CACCCACTGCAGGGGGTCCCAAGGCCGTGCCTCCCC...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGCCGGGCTCCTCATaGCAGGCGATGCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKRPGSS*QAMRLH
Trigger: GTGCAGCCGCATCGCCTGCCATGAGGAGCCCGGCCT...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405009.5
CDS-3UTR TCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCTGTACCAGGCCACTCTaGGACCCTGAGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSCTRPL*DPEKRS
Trigger: GCTCCTCTTCTCAGGGTCTCAGAGTGGCCTGGTACA...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCCTTCCCCGCGGAGCCTaGGATGCCCCTGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGLPRGA*DAPGLL
Trigger: CAGAAGGCCAGGGGCATCTCAGGCTCCGCGGGGAAG...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCAGAGTGACCAGAGGCTaGTCCGCTGATCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSRVTRG*SADPWS
Trigger: GCTCCAAGGATCAGCGGATCAGCCTCTGGTCACTCT...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAGCCAAGGCTGGGGCCTaGTGCCCACCTCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKAKAGA*CPPPCP
Trigger: CGGGCAGGGAGGTGGGCATCAGGCCCCAGCCTTGGC...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCACTGGCCTCCTCGGGGTaGGGGGTCATGTGGACATCG +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHALASSG*GVMWTS
Trigger: CGATGTCCACATGACCCCTCACCCCGAGGAGGCCAG...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACCCTGGGGCAGCGTCTaGAGCCAGGTCACACACTGG +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKPWGSV*SQVTHW
Trigger: CCAGTGTGTGACCTGGCTGCAGACGCTGCCCCAGGG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAAGTGGAACACGCGGATaGGGTGGTCCCAGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHASGTRG*GGPSLR
Trigger: CCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACT...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCCCTTGGGCCATGACTTaGTGGTCCTCAGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSPWAMT*WSSEAL
Trigger: AAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCTGCTCTCGTGCCTTCTaGCCAGCACTCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRICSRAF*PALTWR
Trigger: CCTCCAGGTGAGTGCTGGGCAGAAGGCACGAGAGCA...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGCCTTGGGACCCCCTaGAGTGGGTGCACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHAGLGTP*SGCTGL
Trigger: GAGACCTGTGCACCCACTGCAGGGGGTCCCAAGGCC...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCCCACTCCACCTACCCTaGCGCTGTCATGGGGATGTC +
Preference number: 4 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRIPLHLP*RCHGDV
Trigger: GACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGG...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTTCTGACCTTCGCGTGCTaGCTCCGGGCCACCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSRTRSPGGGPKEHRQGLLTFAC*LRATPP
Trigger: AGGAGGGGTGGCCCGGAGGCAGCACGCGAAGGTCAG...AAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCCCGAGACTGCTCCATTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRIPRLLH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAATGGAGCAGTCTCGG...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GAGTCTAGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGCAGGACCCGCGTCCCTaGACACAGCTGCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: ESSSRTRSPGGGPKEHRQQDPRP*TQLPTG
Trigger: GCCGGTGGGCAGCTGTGTGCAGGGACGCGGGTCCTG...CTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACTAGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTTCTCACCAGGCAGACGTaGCAGGACCCGCGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SSRTRSPGGGPKEHRQGLLTRQT*QDPRPC
Trigger: GCAGGGACGCGGGTCCTGGCACGTCTGCCTGGTGAG...AAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCGCGGGTCCTGGGCTGTaGTCCGGAGCCCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAAGPGL*SGALPG
Trigger: CCCGGGAAGGGCTCCGGAGCACAGCCCAGGACCCGC...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGAGGCCTGGGGGACCGTaGAGCAGCTGTGCCCACCTA +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRRPGGP*SSCAHL
Trigger: TAGGTGGGCACAGCTGCTGCACGGTCCCCCAGGCCT...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGCCAGGTCACACACTaGCCGCCGTGGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKSQVTH*PPWPSR
Trigger: CCTGGATGGCCACGGCGGCCAGTGTGTGACCTGGCT...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAATGCCCAGCACTCACCTaGAGGTGCACCCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKCPALT*RCTLCA
Trigger: GGCGCACAGGGTGCACCTCCAGGTGAGTGCTGGGCA...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCACTGGAGCCTTCCTaGCCCCAAGCTGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGALEPS*PQAAAP
Trigger: GGGCGCTGCAGCTTGGGGCCAGGAAGGCTCCAGTGC...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCACAGAGGTCAGCACATaGTGGCGCCCACCGTCGAGA +
Preference number: 4 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSTEVST*WRPPSR
Trigger: TCTCGACGGTGGGCGCCACCATGTGCTGACCTCTGT...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTTTGGCGGCGCAACGCTaGGTGAGTGCTGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPLAAQR*VSAARP
Trigger: CGGGCGGGCAGCACTCACCCAGCGTTGCGCCGCCAA...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCACACAGCACGTCAACATaGAGCGCCCAGCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHAHSTST*SAQQRR
Trigger: CCGCCGCTGCTGGGCGCTCCATGTTGACGTGCTGTG...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCCCCACAAGGCGGGAATaGGGATGCTGGCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSPTRRE*GCWQIW
Trigger: CCAGATTTGCCAGCATCCCCATTCCCGCCTTGTGGG...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCGGCCACCTGCACAGCTaGATGGTGGAAGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSGHLHS*MVEAVH
Trigger: GTGAACTGCTTCCACCATCCAGCTGTGCAGGTGGCC...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCGTCCTCAGAGGCCCTTaGGGTTTCAGGCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLPASADPSVSTCQAQSAVLRGP*GFRPRL
Trigger: CAGCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGAC...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCCTGACCTGGGGAAGCTaGCAGAGTGACAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSLTWGS*QSDRGS
Trigger: AGACCCTCTGTCACTCTGTCAGCTTCCCCAGGTCAG...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCGTGCGCCTTCCCCACTaGACCCTCTGCGGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAVRLPH*TLCGQA
Trigger: CGCCTGCCCGCAGAGGGTGCAGTGGGGAAGGCGCAC...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCGCCACTGTGAGGCGGTaGTTGTCACACTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSATVRR*LSHSLA
Trigger: AGCAAGGGAGTGTGACAAGCACCGCCTCACAGTGGC...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGGCTCTTGCTGTGTTGTaGCCTGGGGGCCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARALAVL*PGGHPV
Trigger: CACAGGGTGGCCCCCAGGGCACAACACAGCAAGAGC...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCCACGTGGCCCCGTTGTaGACTGGAGGGGTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGHVAPL*TGGVRA
Trigger: AGCCCTCACCCCTCCAGTGCACAACGGGGCCACGTG...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAATGCAGGGACACCCACTaGCAGAGGCGGAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKCRDTH*QRRRQV
Trigger: AACCTGCCTCCGCCTCTGGCAGTGGGTGTCCCTGCA...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACCTTGGGCCATGACTTaGTGGTCCTCAGAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKPWAMT*WSSEAG
Trigger: CCCGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405009.5
CDS-3UTR CCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAAGCGTCCAGCGTGGCTaGCCCCCGGCCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKSVQRG*PPARML
Trigger: CAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCT...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp ACGGCCAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCATGCCCCTGGCCTTCTaGGAGTCAAAGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TARALAGPQSHRPVMRHSMPLAF*ESKSRS
Trigger: GGACCTTGACTTTGACTCCCAGAAGGCCAGGGGCAT...GGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCATGCATCGTCCGCCAGTaGAACACGCGGATGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHACIVRQ*NTRMRW
Trigger: CCACCGCATCCGCGTGTTCCACTGGCGGACGATGCA...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAATGCATCGTCCGCCAGTaGAACACGCGGATGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKCIVRQ*NTRMRW
Trigger: CCACCGCATCCGCGTGTTCCACTGGCGGACGATGCA...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCGGCCAGGGCTCTGGCTaGCCCCCAGAGTCACCGTCC +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAGQGSG*PPESPS
Trigger: GGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCC...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGGCCAGGGCTCTGGCTaGCCCCCAGAGTCACCGTCC +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNGQGSG*PPESPS
Trigger: GGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCCCTGCTCCGGCCACCTaGATCCCACACCCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSPAPAT*IPHPSD
Trigger: ATCGGAAGGGTGTGGGATCCAGGTGGCCGGAGCAGG...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCCCCCCAGCCCGGCACTaGAGCCTTCCTGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAPPARH*SLPGPK
Trigger: CTTGGGGCCAGGAAGGCTCCAGTGCCGGGCTGGGGG...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGCCATGTTCCTCACAGTaGGGTTGGGGAGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARPCSSQ*GWGGTA
Trigger: GGCCGTGCCTCCCCAACCCCACTGTGAGGAACATGG...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGGTCCTGGGCACCTGGTaGCCACCCTTGTCCAACGGA +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRVLGTW*PPLSNG
Trigger: TCCGTTGGACAAGGGTGGCCACCAGGTGCCCAGGAC...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGCCTCTCCAAAGGTCCTaGGCACCTGGTGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARPLQRS*APGGHP
Trigger: AGGGTGGCCACCAGGTGCCCAGGACCTTTGGAGAGG...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCATGCTCTTGGCCGGCTTaGACCCCAGCACCGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHACSWPA*TPAPVL
Trigger: CAGAACCGGTGCTGGGGTCCAAGCCGGCCAAGAGCA...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGGCCTCTCCCAGTTGGTaGGTTGGCCAGGGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARASPSW*VGQGRD
Trigger: ATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGC...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTGGCTGGCCAGCCTCATaGGCTGGGCTACCCGTCCCA +
Preference number: 4 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPGWPAS*AGLPVP
Trigger: TGGGACGGGTAGCCCAGCCCATGAGGCTGGCCAGCC...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAATGGGCCATGACTTGCTaGTCCTCAGAGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKWAMTC*SSEAGL
Trigger: GAGCCCGGCCTCTGAGGACCAGCAAGTCATGGCCCA...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405009.5
CDS-3UTR TCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAACAGCGCATGCACCGGTaGCTGGGTGCCTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKQRMHR*LGASED
Trigger: GTCCTCCGAGGCACCCAGTCACCGGTGCATGCGCTG...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGCCACTCTGAGACCCTaGGAAGAGGAGCGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNATLRP*EEERAP
Trigger: GGGCGCCCGCTCCTCTTCTCAGGGTCTCAGAGTGGC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAGCCACTCTGAGACCCTaGGAAGAGGAGCGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKATLRP*EEERAP
Trigger: GGGCGCCCGCTCCTCTTCTCAGGGTCTCAGAGTGGC...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACTTCAGGGCGCACACTaGCGTCTTGGAGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKLQGAH*RLGGHL
Trigger: GAGATGCCCTCCAAGACGTCAGTGTGCGCCCTGAAG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCCAAAGTCAAGGTCCATaGCGGGCTCCTCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: HLPASADPSVSTCQAQSAQSQGP*RAPHGR
Trigger: CCTGCCATGAGGAGCCCGTCATGGACCTTGACTTTG...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGAGATCTGGCCGGATCGTaGCCTCGGCGATCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRDLAGS*PRRSRD
Trigger: ATCCCGGGATCGCCGAGGTCACGATCCGGCCAGATC...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCTGCGCGTGGGTAGAGTaGCCAGAGGCTGATCCGCTG +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGCAWVE*PEADPL
Trigger: CAGCGGATCAGCCTCTGGTCACTCTACCCACGCGCA...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGCTTGTGCCTTTGACTaGAAGCACGAGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHAACAFD*KHEGQG
Trigger: CCCCTGGCCCTCGTGCTTTCAGTCAAAGGCACAAGC...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCGGCAGCTCAGCCAGGTaGATGAAAGTCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSGSSAR*MKVLGL
Trigger: CAGGCCCAGGACTTTCATTCACCTGGCTGAGCTGCC...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCCGACCCAGGTTCTGTTaGCACAAAGGCCGACCTGTC +
Preference number: 4 (lower is better)
Translates to: HLPASADPSVSTCQAQSARPRFC*HKGRPV
Trigger: GACAGGTCGGCCTTTGTGTCAACAGAACCTGGGTCG...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACAGAAGTGCAGCGCATaGACCGGTGACTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKQKCSA*TGDWVP
Trigger: AGGCACCCAGTCACCGGTGCATGCGCTGCACTTCTG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAGCTCCTTCGCAGAAGTaGAGCGCATGCACCGGTGAC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKAPSQK*SACTGD
Trigger: GTCACCGGTGCATGCGCTGCACTTCTGCGAAGGAGC...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAACCGCTCTCCGCGTCTaGAGGCTCCAGATGTGTACC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKTALRV*RLQMCT
Trigger: GGTACACATCTGGAGCCTGCAGACGCGGAGAGCGGT...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACACCACGACAGCGCTCCTaGCCTCCGCGAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTPRQRS*PPRGPT
Trigger: TGTGGGACCTCGCGGAGGGCAGGAGCGCTGTCGTGG...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGACCCCGGCCAGGATGCTaGTCCGGCAGAAGCCCACAC +
Preference number: 4 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRPRPGC*SGRSPH
Trigger: GTGTGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGG...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAACCCCGGCCAGGATGCTaGTCCGGCAGAAGCCCACAC +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKPRPGC*SGRSPH
Trigger: GTGTGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGG...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCTCTGAACCTCGTCGCTaGCCCTCCCTGGCACGGCAA +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGSEPRR*PSLARQ
Trigger: TTGCCGTGCCAGGGAGGGGCAGCGACGAGGTTCAGA...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAGCAGGCACATGGGCATaGCCAGCTTGGCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKAGTWA*PAWHLP
Trigger: AGGCAGATGCCAAGCTGGGCATGCCCATGTGCCTGC...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGCGGCTGCACACCTTCTaGTCAGAGACGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARRLHTF*SETSHR
Trigger: CCTGTGGGACGTCTCTGAGCAGAAGGTGTGCAGCCG...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACGGCTGCACACCTTCTaGTCAGAGACGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKRLHTF*SETSHR
Trigger: CCTGTGGGACGTCTCTGAGCAGAAGGTGTGCAGCCG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCCTCTGCGGGCAGGCGTaGCCTCCCGGATCCCACATC +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGALCGQA*PPGSHI
Trigger: GATGTGGGATCCGGGAGGGCACGCCTGCCCGCAGAG...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCCTTGTCACACTCCCTTaGTGCTCTCGTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRILVTLP*CSRAFC
Trigger: GCAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAG...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAAGCGACCAGCCATGCTaGCAGGAGTCGCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGSDQPC*QESPLR
Trigger: CCTGAGAGGCGACTCCTGGCAGCATGGCTGGTCGCT...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGCAAGCCCAATCTGCCTaGAGGGACACCCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRQAQSA*RDTHCQ
Trigger: CTGGCAGTGGGTGTCCCTGCAGGCAGATTGGGCTTG...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGCCCTCGGTGTCTACGTaGCAAGCCCAATCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRPSVST*QAQSAC
Trigger: GCAGGCAGATTGGGCTTGGCACGTAGACACCGAGGG...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCATGACGGGCTCCTCATaGCAGGCGATGCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGMTGSS*QAMRLH
Trigger: GTGCAGCCGCATCGCCTGCCATGAGGAGCCCGTCAT...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACAGGATCTTGCGATCTaGCCGGATCGTGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKQDLAI*PDRDLG
Trigger: GCCGAGGTCACGATCCGGCCAGATCGCAAGATCCTG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGAAACACGCGGATGCGGTaGTCCCAGCCTGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRNTRMR*SQPAVA
Trigger: GGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTT...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGGGCACTGATGCTAAGTaGGGGACCAGGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARGTDAK*GTRASS
Trigger: TGAGGAGGCCCTGGTCCCCCACTTAGCATCAGTGCC...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCGAGCATCCTGCCTGGTaGGGGTCTGAGGGCACTGAT +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSEHPAW*GSEGTD
Trigger: ATCAGTGCCCTCAGACCCCCACCAGGCAGGATGCTC...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGAAGGTCCTGGGCACCTaGTGGCCACCCTTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARKVLGT*WPPLSN
Trigger: GTTGGACAAGGGTGGCCACCAGGTGCCCAGGACCTT...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTGCTGCCTCTCCCAGTTaGTGGGTTGGCCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPAASPS*WVGQGR
Trigger: ACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGC...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCCTGCCCACCGGCCAGTaGAGTGGGACCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCLPTGQ*SGTCCP
Trigger: GGGGCAGCAGGTCCCACTCCACTGGCCGGTGGGCAG...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAATGTACCAGGCCACTCTaGGACCCTGAGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKCTRPL*DPEKRS
Trigger: GCTCCTCTTCTCAGGGTCTCAGAGTGGCCTGGTACA...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCCTTCCCCGCGGAGCCTaGGATGCCCCTGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCLPRGA*DAPGLL
Trigger: CAGAAGGCCAGGGGCATCTCAGGCTCCGCGGGGAAG...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCAGCAAGCCATCGGCGGTaGAGGCCACGCACTGGACAG +
Preference number: 4 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPASHRR*RPRTGQ
Trigger: CTGTCCAGTGCGTGGCCTTCACCGCCGATGGCTTGC...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGCAGAGGCTGATCCGCTaGTCCTTGGAGCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWQRLIR*SLEPAA
Trigger: GGCCGCGGGCTCCAAGGATCAGCGGATCAGCCTCTG...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTTGCGCGTGGGTAGAGTaGCCAGAGGCTGATCCGCTG +
Preference number: 4 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPCAWVE*PEADPL
Trigger: CAGCGGATCAGCCTCTGGTCACTCTACCCACGCGCA...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGATGGCCTTGGCCACTGTaGGGCGGTGCTTGTCACACT +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGWPWPL*GGACHT
Trigger: AGTGTGACAAGCACCGCCTCACAGTGGCCAAGGCCA...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTTCCGGGAACTCCCCTaGTCCACCCCTGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCFRELP*STPAPA
Trigger: GGCCGGAGCAGGGGTGGATCAGGGGAGTTCCCGGAA...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCTCCCTGACACCTCAGTaGTATGAAAATACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSSLTPQ*YENTSR
Trigger: CCGGGAGGTATTTTCATATCACTGAGGTGTCAGGGA...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TGTGGAAGGGCTGCCTCTCCCAGTTGGTGGGTTGGCCAGGGGCGTGATGGCAGCGACCCTTCCCCTCCCTaGCACCTCAGTGATATGAAA +
Preference number: 4 (lower is better)
Translates to: CGRAASPSWWVGQGRDGSDPSPP*HLSDMK
Trigger: TTTCATATCACTGAGGTGTCAGGGAGGGGAAGGGTC...GCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCCACCTTCCCTCACTGTaGCAGCCTGTGATGAGCACC +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSHLPSL*QPVMST
Trigger: GGTGCTCATCACAGGCTGTCACAGTGAGGGAAGGTG...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGCCCTGCTTGTGCCTTTaGCTGAAAGCACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRPCLCL*LKARGP
Trigger: TGGCCCTCGTGCTTTCAGTCAAAGGCACAAGCAGGG...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGGACCTGCTGCCCCTCTaGCAGCTCCTGGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARDLLPL*QLLVIR
Trigger: TCTGATTACCAGGAGCTGTCAGAGGGGCAGCAGGTC...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATTCTCCCGGCATCGGCTaGCCCCTCGGTGTCTACGTG +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNSPGIG*PLGVYV
Trigger: CACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGA...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAACCCTGGGGCAGCGTCTaGAGCCAGGTCACACACTGG +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKPWGSV*SQVTHW
Trigger: CCAGTGTGTGACCTGGCTGCAGACGCTGCCCCAGGG...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCGGCAGGCGATGCGGCTaGACACCTTCTGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGGRRCG*TPSAQR
Trigger: TCTCTGAGCAGAAGGTGTGCAGCCGCATCGCCTGCC...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCCCTCATGGCAGGCGATaGGGCTGCACACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGPHGRR*GCTPSA
Trigger: AGCAGAAGGTGTGCAGCCGCATCGCCTGCCATGAGG...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATAGTGGAACACGCGGATaGGGTGGTCCCAGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNSGTRG*GGPSLR
Trigger: CCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACT...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATCAAGCCAACGTCTCCTaGAGGCCTCGGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNQANVS*RPRTAR
Trigger: CCTGGCCGTCCGAGGCCTGCAGGAGACGTTGGCTTG...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGGTCACACTCCCTTGCTaGTCTCGTGCCTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRVTLPC*SRAFCP
Trigger: TGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGAC...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGGCTAAGTCCTGCTCTTaGTGTGTTGTGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRAKSCS*CVVPWG
Trigger: CCCCCAGGGCACAACACAGCAAGAGCAGGACTTAGC...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACACAGGCTGGGCCCGGCTaGATGCAGTGTGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTQAGPG*MQCEAL
Trigger: CAGAGCCTCACACTGCATGCAGCCGGGCCCAGCCTG...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGCCCCAGCACCGGTTCTaGTGCTCTCCCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKPQHRF*CSPRQL
Trigger: GAGCTGCCTGGGAGAGCAGCAGAACCGGTGCTGGGG...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGACCAGGAGGGCTGCACTaGTCTTGGCCGGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRPGGLH*SWPAWT
Trigger: GGTCCAAGCCGGCCAAGAGCAGTGCAGCCCTCCTGG...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCAGAGCCACATGGCTCTaGTGTGGACACCACGGAGCA +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSRATWL*CGHHGA
Trigger: TGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCT...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCAATGCTGACCTTCGCGTaGTGCCTCCGGGCCACCCCT +
Preference number: 4 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPMLTFA*CLRATP
Trigger: AGGGGTGGCCCGGAGGCAGCACGCGAAGGTCAGCAT...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCGTTCATCCCAGGAGCTaGATGCTGACCTTCGCGTGC +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSVHPRS*MLTFAC
Trigger: GCACGCGAAGGTCAGCATGCAGCTCCTGGGATGAAC...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCGGCAGCGACCAGCCATaGTGCCAGGAGTCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAGSDQP*CQESPL
Trigger: GAGAGGCGACTCCTGGCAGCATGGCTGGTCGCTGCC...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGGGCAGCGGCTGGGGATaGTGGAGCATACGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKGSGWG*WSIRLQ
Trigger: CTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCC...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCCTGATTGAACATCATTaGCTGGGGAGTGGAGACACG +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSLIEHH*LGSGDT
Trigger: CGTGTCTCCACTCCCCAGGCAATGATGTTCAATCAG...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCGCATGCACCGGTGACTaGGTGCCTCGGAGGACAAAC +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGACTGD*VPRRTN
Trigger: GTTTGTCCTCCGAGGCACCCAGTCACCGGTGCATGC...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTACACACTGGCCGCCGTaGCCATCCAGGGTGGTAACC +
Preference number: 4 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPTHWPP*PSRVVT
Trigger: GGTTACCACCCTGGATGGCCACGGCGGCCAGTGTGT...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATAGCCAGGTCACACACTaGCCGCCGTGGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNSQVTH*PPWPSR
Trigger: CCTGGATGGCCACGGCGGCCAGTGTGTGACCTGGCT...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAATGGGCATGCCCAGCTTaGCATCTGCCTTCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKWACPA*HLPSAS
Trigger: TGAAGCCGAAGGCAGATGCCAAGCTGGGCATGCCCA...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp GAGTCTAGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGATGACGGGCTCCTCATaGCAGGCGATGCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ESSSRTRSPGGGPKEHRQMTGSS*QAMRLH
Trigger: GTGCAGCCGCATCGCCTGCCATGAGGAGCCCGTCAT...CTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACTAGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGACTCCCGGGAAGGGAGTaGGTGAGTCATGCGCGTGGG +
Preference number: 4 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRLPGRE*VSHARG
Trigger: CCCACGCGCATGACTCACCCACTCCCTTCCCGGGAG...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAACTCCCGGGAAGGGAGTaGGTGAGTCATGCGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKLPGRE*VSHARG
Trigger: CCCACGCGCATGACTCACCCACTCCCTTCCCGGGAG...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACATGTGTTGGGAGCTCCTaGCCTCCTCGGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTCVGSS*PPRGEG
Trigger: CCCCTCACCCCGAGGAGGCCAGGAGCTCCCAACACA...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCTTCTGCCTGGAAACCTaGAAATGCCATGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: QASTRARWSPSLGQGPLSFCLET*KCHVVL
Trigger: CAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAA...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACAGGTGGTCTCCAAGCTTaGGCCAGGGGCCGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTGGLQA*ARGRFP
Trigger: GGGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACC...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGAGGCCCCGTTGTGCACTaGAGGGGTGAGGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRGPVVH*RGEGCV
Trigger: AACACAGCCCTCACCCCTCCAGTGCACAACGGGGCC...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTGACAGTGCCCAGGGCTaGGGCTCACAGCCACGAGAA +
Preference number: 4 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPDSAQG*GSQPRE
Trigger: TTCTCGTGGCTGTGAGCCCCAGCCCTGGGCACTGTC...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGGAGGCAGGTTCTCCTaGTCCCAGACCCAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNGGRFS*SQTQGR
Trigger: ACGGCCCTGGGTCTGGGACCAGGAGAACCTGCCTCC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCACGTCCCACTCAGCAGTaGCTGCCTGGCCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPRPTQQ*LPGLPS
Trigger: AGAGGGGAGGCCAGGCAGCCACTGCTGAGTGGGACG...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACATCCCGGCCAGTGCTGTaGGACCTCCCCTGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTSRPVL*DLPCRA
Trigger: AGCCCTACAGGGGAGGTCCCACAGCACTGGCCGGGA...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCAGAGTGACCAGAGGCTaGTCCGCTGATCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGRVTRG*SADPWS
Trigger: GCTCCAAGGATCAGCGGATCAGCCTCTGGTCACTCT...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCCGGGAAGGGAGTGGGTaGGTCATGCGCGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAREGSG*VMRVGR
Trigger: TCTACCCACGCGCATGACTCACCCACTCCCTTCCCG...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCTTTCCCGGCCAGCACTaGCATTCCCGTTTGATGGAA +
Preference number: 4 (lower is better)
Translates to: HLPASADPSVSTCQAQSAFPGQH*HSRLME
Trigger: TTCCATCAAACGGGAATGTCAGTGCTGGCCGGGAAA...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAATCATGCTGGGCAGGATaGAGTTACCTGAGGCTACGC +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKSCWAG*SYLRLR
Trigger: GCGTAGCCTCAGGTAACTGCATCCTGCCCAGCATGA...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGGCAGGGGGCCGTCATaGTGGGCAGGATGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNGRGPS*WAGCSY
Trigger: GTAACTGCATCCTGCCCAGCATGACGGCCCCCTGCC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATTCTGAACCTCGTCGCTaGCCCTCCCTGGCACGGCAA +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNSEPRR*PSLARQ
Trigger: TTGCCGTGCCAGGGAGGGGCAGCGACGAGGTTCAGA...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGCCCAGCTTGGCATCTaGCTTCGGCTTCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNAQLGI*LRLQGA
Trigger: TGCGCCCTGAAGCCGAAGGCAGATGCCAAGCTGGGC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAGCCCAGCTTGGCATCTaGCTTCGGCTTCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKAQLGI*LRLQGA
Trigger: TGCGCCCTGAAGCCGAAGGCAGATGCCAAGCTGGGC...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATAGCACGGCCAGTGGCTaGATCGTCCGCCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNSTASG*IVRQWN
Trigger: GTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCT...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGACCTTGGGCCATGACTTaGTGGTCCTCAGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGPWAMT*WSSEAL
Trigger: AAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAAGCACCTGCAGTCACTaGAGCCTAAACCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGSTCSH*SLNPGP
Trigger: GGGTCCTGGGTTTAGGCTGCAGTGACTGCAGGTGCT...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAAACCTCATGCTGGCATaGACACCTGGGCCCTCATGT +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHANLMLA*TPGPSC
Trigger: ACATGAGGGCCCAGGTGTGCATGCCAGCATGAGGTT...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGACACTCGCCAACCTCATaGTGGCATGCACACCTGGGC +
Preference number: 4 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRHSPTS*WHAHLG
Trigger: GCCCAGGTGTGCATGCCAGCATGAGGTTGGCGAGTG...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCAGGGTCTGTACACCCTaGCCACAGCTCTTCATGGCC +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGRVCTP*PQLFMA
Trigger: GGCCATGAAGAGCTGTGGGCAGGGTGTACAGACCCT...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCACAGGACCAGGAGGGCTaGACTGCTCTTGGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPQDQEG*TALGRL
Trigger: AAGCCGGCCAAGAGCAGTGCAGCCCTCCTGGTCCTG...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCAAGATGTGGAAGGGCTaGCTCTCCCAGTTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSKMWKG*LSQLVG
Trigger: ACCCACCAACTGGGAGAGGCAGCCCTTCCACATCTT...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGCGCCCGCGGATGGGGTaGTGGCCGAACCTACCTTGT +
Preference number: 4 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWRPRMG*WPNLPC
Trigger: ACAAGGTAGGTTCGGCCAGCACCCCATCCGCGGGCG...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGAGTGCCAAGCCCAATCTaGCTGCAGGGACACCCACTG +
Preference number: 4 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRVPSPI*LQGHPL
Trigger: CAGTGGGTGTCCCTGCAGGCAGATTGGGCTTGGCAC...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCCCCCTCTGTCCCTCCTaGCCAGCTCCTAATGGGCCT +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAPLCPS*PAPNGP
Trigger: AGGCCCATTAGGAGCTGGGCAGGAGGGACAGAGGGG...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAGGACTTCCCGGCCAGTaGTGTGGGACCTCCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKGLPGQ*CGTSPV
Trigger: TACAGGGGAGGTCCCACAGCACTGGCCGGGAAGTCC...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAACACACTGGCCGCCGTaGCCATCCAGGGTGGTAACC +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKTHWPP*PSRVVT
Trigger: GGTTACCACCCTGGATGGCCACGGCGGCCAGTGTGT...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAATGCCCCTGGCCTTCTaGGAGTCAAAGTCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHAMPLAF*ESKSRS
Trigger: GGACCTTGACTTTGACTCCCAGAAGGCCAGGGGCAT...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGGTCCCAGCCTGCGGTaGCCAGGATCTTGCGATCTG +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNGPSLR*PGSCDL
Trigger: CAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAGTGAAGGCCACGCACTaGACAGCGGCGCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKVKATH*TAALWK
Trigger: CTTCCACAGCGCCGCTGTCCAGTGCGTGGCCTTCAC...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGAGCTGAGCATCCTGCCTaGTGGGGGTCTGAGGGCACT +
Preference number: 4 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRAEHPA*WGSEGT
Trigger: AGTGCCCTCAGACCCCCACCAGGCAGGATGCTCAGC...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCAACCCACACTCGGGGTaGCCCATTCAACAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGNPHSG*PIQQQV
Trigger: CACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTT...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GAGTCTAGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGAGTACCCGAGCCAGGTaGTCTCCAAGCTTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ESSSRTRSPGGGPKEHRQSTRAR*SPSLGQ
Trigger: CTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACT...CTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACTAGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGACCCTGCCGCTGTCATaGGGATGTCAGAACCTGACA +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARTLPLS*GCQNLT
Trigger: TGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGAGCTGGCATGCACACCTaGGCCCTCATGTGGGATACC +
Preference number: 4 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRAGMHT*ALMWDT
Trigger: GGTATCCCACATGAGGGCCCAGGTGTGCATGCCAGC...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCCACATGGCTCTGCTGTaGACACCACGGAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGHMALL*TPRSSS
Trigger: TGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTG...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACAAGCGGCTGGGGATGCTaGAGCATACGGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTSGWGC*SIRLQP
Trigger: TGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCT...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGCCCAGGGCCGTCTGTTaGCCTGCAGGTAACACGCAG +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKPRAVC*PAGNTQ
Trigger: CTGCGTGTTACCTGCAGGCCAACAGACGGCCCTGGG...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGATGTACCAGGCCACTCTaGGACCCTGAGAAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRCTRPL*DPEKRS
Trigger: GCTCCTCTTCTCAGGGTCTCAGAGTGGCCTGGTACA...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGCTTCAGGGCGCACACTaGCGTCTTGGAGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKLQGAH*RLGGHL
Trigger: GAGATGCCCTCCAAGACGTCAGTGTGCGCCCTGAAG...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGGCTCAGCCAGGTGAATaGAAGTCCTGGGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKAQPGE*KSWACP
Trigger: AGGGCAGGCCCAGGACTTTCATTCACCTGGCTGAGC...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AGATGTGCCTGGACACTGCTCAACGCCACATGGCCTGGGGCAGGGAGCTCAAGGTGGTCAGACGCATGGTaGTTCATCACGACCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RCAWTLLNATWPGAGSSRWSDAW*FITTQV
Trigger: AACCTGGGTCGTGATGAATCACCATGCGTCTGACCA...CCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAACAGAAGTGCAGCGCATaGACCGGTGACTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKQKCSA*TGDWVP
Trigger: AGGCACCCAGTCACCGGTGCATGCGCTGCACTTCTG...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAACCGCTCTCCGCGTCTaGAGGCTCCAGATGTGTACC +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKTALRV*RLQMCT
Trigger: GGTACACATCTGGAGCCTGCAGACGCGGAGAGCGGT...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCACCCTGGGGCAGCGTCTaGAGCCAGGTCACACACTGG +
Preference number: 4 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPPWGSV*SQVTHW
Trigger: CCAGTGTGTGACCTGGCTGCAGACGCTGCCCCAGGG...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGCAGGCACATGGGCATaGCCAGCTTGGCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNAGTWA*PAWHLP
Trigger: AGGCAGATGCCAAGCTGGGCATGCCCATGTGCCTGC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAGGCAGGCGATGCGGCTaGACACCTTCTGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKGRRCG*TPSAQR
Trigger: TCTCTGAGCAGAAGGTGTGCAGCCGCATCGCCTGCC...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGACCTGCAGGGCCTGCTaGCAGTCCAGGCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWTCRAC*QSRLQT
Trigger: TGTCTGGAGCCTGGACTGGCAGCAGGCCCTGCAGGT...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCAGGGGGCCACCCTGTGTaGAGCCGCAGCTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPGGHPV*SRSCDC
Trigger: ACAGTCACAGCTGCGGCTGCACACAGGGTGGCCCCC...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAAAATACCTCCCGGAGTaGCCTACGCATCCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKKYLPE*PTHPGG
Trigger: GCCGCCAGGATGCGTAGGGCACTCCGGGAGGTATTT...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCAAGCTCCCTCAGCACCTaGAGTCACTGCAGCCTAAAC +
Preference number: 4 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPASSLST*SHCSLN
Trigger: GTTTAGGCTGCAGTGACTGCAGGTGCTGAGGGAGCT...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTGATGTGCCTGGACACTaGTCAACGCCACATGGCCTG +
Preference number: 4 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPDVPGH*STPHGL
Trigger: CAGGCCATGTGGCGTTGAGCAGTGTCCAGGCACATC...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACAAGGGGGCCGTCATGCTaGGCAGGATGCAGTTACCTG +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTRGPSC*AGCSYL
Trigger: CAGGTAACTGCATCCTGCCCAGCATGACGGCCCCCT...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAAGGGGGCCGTCATGCTaGGCAGGATGCAGTTACCTG +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKRGPSC*AGCSYL
Trigger: CAGGTAACTGCATCCTGCCCAGCATGACGGCCCCCT...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCAGCATGCACCGGTGACTaGGTGCCTCGGAGGACAAAC +
Preference number: 4 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPACTGD*VPRRTN
Trigger: GTTTGTCCTCCGAGGCACCCAGTCACCGGTGCATGC...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGCATGCACCGGTGACTaGGTGCCTCGGAGGACAAAC +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNACTGD*VPRRTN
Trigger: GTTTGTCCTCCGAGGCACCCAGTCACCGGTGCATGC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACGCACACTGACGTCTTaGAGGGCATCTCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKRTLTS*RASPES
Trigger: AGATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCGGTCCCAGCCTGCGGTaGCCAGGATCTTGCGATCTG +
Preference number: 4 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCGPSLR*PGSCDL
Trigger: CAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACC...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGACCCGGATCCCACATCTaGCCTGGCCCTGTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGPGSHI*PGPVRC
Trigger: GCAGCGCACAGGGCCAGGCCAGATGTGGGATCCGGG...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCGGGATACCCACCTCGTaGCTGTGGGACGTAGGGAGT +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAGIPTS*LWDVGS
Trigger: ACTCCCTACGTCCCACAGCCACGAGGTGGGTATCCC...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGATCGCCAACCTCATGCTaGCATGCACACCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRSPTSC*HAHLGP
Trigger: AGGGCCCAGGTGTGCATGCCAGCATGAGGTTGGCGA...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAACACCAAGTTCTCTCTaGCTTGAGAGGCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHATPSSL*LERPHC
Trigger: GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGT...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGGTCCCGGCCCTGACTaGGGAGCTGGCGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAGPGPD*GAGAPG
Trigger: CCCAGGGGCGCCAGCTCCTCAGTCAGGGCCGGGACC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATGGATTGGTGAGTTCATaGGTCCCACGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNGLVSS*VPRTCR
Trigger: CCTGCAGGTGCGTGGGACTCATGAACTCACCAATCC...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCCGGCGCAACGCTGGGTaGGTGCTGCCCGCCCGCGGA +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQARRNAG*VLPARG
Trigger: TCCGCGGGCGGGCAGCACTCACCCAGCGTTGCGCCG...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCTGGGAAACACCTGATTaGACATCATTGCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSWETPD*TSLPGE
Trigger: CTCCCCAGGCAATGATGTTCAATCAGGTGTTTCCCA...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCACCGCTCTCCGCGTCTaGAGGCTCCAGATGTGTACC +
Preference number: 4 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCTALRV*RLQMCT
Trigger: GGTACACATCTGGAGCCTGCAGACGCGGAGAGCGGT...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCACAGCTTCTCTGGATCTaGCCATGGGCCCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPQLLWI*PWAPLQ
Trigger: TTGGAGTGGGGCCCATGGGCAGATCCAGAGAAGCTG...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAAATGCCATGTGGTCCTaGAGGAGGCTGGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKNAMWS*RRLVPL
Trigger: GAGTGGCACCAGCCTCCTGCAGGACCACATGGCATT...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAGCAGTGAGCCGAGACTaGTCCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKAVSRD*SIALQP
Trigger: AGGCTGGAGTGCAATGGAGCAGTCTCGGCTCACTGC...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATTGGGCATGCCCAGCTTaGCATCTGCCTTCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNWACPA*HLPSAS
Trigger: TGAAGCCGAAGGCAGATGCCAAGCTGGGCATGCCCA...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCACAGCGGGGACTCCATaGTCCTTGGGCCATGACTTG +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGATAGTP*SLGHDL
Trigger: CAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGT...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAACAGCGGGGACTCCATaGTCCTTGGGCCATGACTTG +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKTAGTP*SLGHDL
Trigger: CAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGT...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCACATCGACGCAGCTATaGTTGGGGCCTATCATCTCC +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGTSTQL*LGPIIS
Trigger: GGAGATGATAGGCCCCAACCATAGCTGCGTCGATGT...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGACCTGGGCCCTCATGTaGGATACCCACCTCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWTWALM*DTHLVA
Trigger: AGCCACGAGGTGGGTATCCCACATGAGGGCCCAGGT...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTTTTATGGAGGAAGATGTaGAAGGGCTGCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSRTRSPGGGPKEHRQGLLWRKM*KGCLSQ
Trigger: CTGGGAGAGGCAGCCCTTCCACATCTTCCTCCATAA...AAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAATAATTCTAGTGCTTTaGGAGGCTAGAGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHAIILVL*EARGGR
Trigger: CCTCCCGCCTCTAGCCTCCCAAAGCACTAGAATTAT...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGACTCAGGATCCCACTCTaGGCCGTGAAAGTTACTCCA +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGLRIPL*AVKVTP
Trigger: TGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAACCGGAGGCAGCGGCTaGGGATGCTGGAGCATACGG +
Preference number: 4 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGTGGSG*GCWSIR
Trigger: CCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCCCGCGGATGGGGTGCTaGCCGAACCTACCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAPRMGC*PNLPCK
Trigger: TTTACAAGGTAGGTTCGGCCAGCACCCCATCCGCGG...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGTCATTGCCTGGGGAGTaGAGACACGCACAGCACGTC +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKSLPGE*RHAQHV
Trigger: GACGTGCTGTGCGTGTCTCCACTCCCCAGGCAATGA...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAGCCAGCCTCATGGGCTaGGCTACCCGTCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGASLMG*ATRPTQ
Trigger: CTGAGTGGGACGGGTAGCCCAGCCCATGAGGCTGGC...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 72 bp CAGCCTTGTGGGGCCCTGAGCAGAGGACCAGCTACGTaGTGCCCGTGCCTCGACACATGGAAATTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QPCGALSRGPAT*CPCLDTWKFFQ
Trigger: TTGGAAGAATTTCCATGTGTCGAGGCACGGGCACAACGTAGCTGGTCCTCTGCTCAGGGCCCCACAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCACAGGATGCAGTTACCTaGGGCTACGCGAATCGCCCG +
Preference number: 4 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPQDAVT*GYANRP
Trigger: CGGGCGATTCGCGTAGCCTCAGGTAACTGCATCCTG...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGAAATACCAACCTCATaGAGACAGCGGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGEIPTS*RQRGLH
Trigger: ATGGAGTCCCCGCTGTCTTCATGAGGTTGGTATTTC...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GAGTCTAGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGTCCCCATGGTACCTCTaGCCAACAGAGAAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ESSSRTRSPGGGPKEHRQSPWYL*PTEKCG
Trigger: ACCACACTTCTCTGTTGGTCAGAGGTACCATGGGGA...CTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACTAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTTGACACCTCAGTGATATaGAAATACCTCCCGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SSRTRSPGGGPKEHRQGLDTSVI*KYLPEC
Trigger: GCACTCCGGGAGGTATTTTCATATCACTGAGGTGTC...AAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAATCCATCCCTGCACACTaGGATTCAGAACAAGATGTG +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKSIPAH*DSEQDV
Trigger: CACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGA...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAAAAATTAGCTGGGCATaGTGGCCTGCACCTATGTGG +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGKISWA*WPAPMW
Trigger: CCACATAGGTGCAGGCCATCATGCCCAGCTAATTTT...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TGCAGTGGGTGCACAGGTCTCACTGACAAATCCAACACCCCCATCCCCAGGCCTTCCCACTCTGGGCCGTaGAAGTTACTCCACAGAACA +
Preference number: 4 (lower is better)
Translates to: CSGCTGLTDKSNTPIPRPSHSGP*KLLHRT
Trigger: TGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGA...AGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTTCAGGTGGGAAACACCTaGTTGAACATCATTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSRTRSPGGGPKEHRQGLQVGNT*LNIIAW
Trigger: CCAGGCAATGATGTTCAATCAGGTGTTTCCCACCTG...AAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCGCTTCATCCCTCAACTaGTGCTTTCCTATGTGGACT +
Preference number: 4 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSASSLN*CFPMWT
Trigger: AGTCCACATAGGAAAGCATCAGTTGAGGGATGAAGC...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TGCATGCAAGAGGTGGCAGGGGACAGATGTGCTGCTGTTCCCAGGCCACCTGCACAGGATGAGGCCAAATaGCTCGATTTCTCTACACCC +
Preference number: 4 (lower is better)
Translates to: CMQEVAGDRCAAVPRPPAQDEAK*LDFSTP
Trigger: GGGTGTAGAGAAATCGAGTCATTTGGCCTCATCCTG...TGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATCATGCTGGGCAGGATaGAGTTACCTGAGGCTACGC +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKSCWAG*SYLRLR
Trigger: GCGTAGCCTCAGGTAACTGCATCCTGCCCAGCATGA...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCACCCCCTGCAGTGGGTaGACAGGTCTCACTGACAAA +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGATPCSG*TGLTDK
Trigger: TTTGTCAGTGAGACCTGTGCACCCACTGCAGGGGGT...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GACACAAAGGCCGACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGACAAAGTTTTCACCGGTaGCGGCTTGTTGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DTKADLSRATWLCCGHHGQSFHR*RLVVFH
Trigger: GTGGAAGACAACAAGCCGGCACCGGTGAAAACTTTG...TCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGTCGGCCTTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CTCAGGATCCCACTCTGGGCCGTGAAAGTTACTCCACAGAACACCCCAAGGCCAGAGGTCAAGTGTGCATaGAAGAGGTGGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LRIPLWAVKVTPQNTPRPEVKCA*KRWQGT
Trigger: TGTCCCCTGCCACCTCTTGCATGCACACTTGACCTC...TGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGCGACGCAGCTATGGTTaGGGCCTATCATCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKRRSYG*GLSSPE
Trigger: CTCAGGAGATGATAGGCCCCAACCATAGCTGCGTCG...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCAGAACAAGATGTGCCTaGACACTGCTCAACGCCACA +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGRTRCA*TLLNAT
Trigger: TGTGGCGTTGAGCAGTGTCCAGGCACATCTTGTTCT...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCTTGAACATCATTGCCTaGGGAGTGGAGACACGCACA +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGLNIIA*GVETRT
Trigger: TGTGCGTGTCTCCACTCCCCAGGCAATGATGTTCAA...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCTGTGCATGCAAGAGGTaGCAGGGGACAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGACACKR*QGTDVL
Trigger: CAGCACATCTGTCCCCTGCCACCTCTTGCATGCACA...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 72 bp CCTCCTCCCCACTTAATGCCTTCACTGCTGGCTCTGTaGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: PPPHLMPSLLAL*AFLPAYRKWLF
Trigger: AAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAACAGAGCCAGCAGTGAAGGCATTAAGTGGGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGGGCAGGAGAATCGCTTaGACCTGGGAATCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKGRRIA*TWESEV
Trigger: AACCTCTGATTCCCAGGTTCAAGCGATTCTCCTGCC...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAACTGGCAAATCTGGTATaGAGGTTGAGACCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKLANLV*RLRPRG
Trigger: TCCTCGGGGTCTCAACCTTCATACCAGATTTGCCAG...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGGGCTGCAGTAAGCTATaGTCATGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKGCSKL*SCHCTP
Trigger: TGGAGTGCAGTGGCATGATCATAGCTTACTGCAGCC...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGTCATGCTGGGCAGGATaGAGTTACCTGAGGCTACGC +
Preference number: 4 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWSCWAG*SYLRLR
Trigger: GCGTAGCCTCAGGTAACTGCATCCTGCCCAGCATGA...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGGCCCCCGGCCAGGATaGTGCTCCGGCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAGPRPG*CSGRSP
Trigger: TGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGGAGTGGGCGGGAGCTaGAGTCGGCCTGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAGVGGS*SRPATA
Trigger: GGCTGTGGCAGGCCGACTGCAGCTCCCGCCCACTCC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCAGACATCAGCAGGCAGTaGCACTCGCCAACCTCATGC +
Preference number: 4 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPDISRQ*HSPTSC
Trigger: GCATGAGGTTGGCGAGTGGCACTGCCTGCTGATGTC...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAGCGTCCAGCGTGGCTaGCCCCCGGCCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQASVQRG*PPARML
Trigger: CAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCT...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCGGCAAGCGTCCAGCGTaGCTGGCCCCCGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVGKRPA*LAPGQD
Trigger: ATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCC...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGACGCACACTGACGTCTTaGAGGGCATCTCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRRTLTS*RASPES
Trigger: AGATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCG...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATCGCACACTGACGTCTTaGAGGGCATCTCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNRTLTS*RASPES
Trigger: AGATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCG...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGACAGGATCTTGCGATCTaGCCGGATCGTGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGQDLAI*PDRDLG
Trigger: GCCGAGGTCACGATCCGGCCAGATCGCAAGATCCTG...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGGCCAGGGCTCTGGCTaGCCCCCAGAGTCACCGTCC +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAGQGSG*PPESPS
Trigger: GGACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACATGCAGTGTGAGGCTCTaGCTGCTAAGTCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTCSVRL*LLSPAL
Trigger: AAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCA...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAGTTCAGATTTCTGCCTaGAAACCTGGAAATGCCATG +
Preference number: 4 (lower is better)
Translates to: QGSGWPPESPSCDEALHKVQISA*KPGNAM
Trigger: CATGGCATTTCCAGGTTTCCAGGCAGAAATCTGAAC...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACAACCTACCTTGTAAAGTaGGGCTGCACAGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTTYLVK*GCTEVS
Trigger: GCTGACCTCTGTGCAGCCCCACTTTACAAGGTAGGT...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATTGTCCCCATCGTCCGTaGCTTCATCCCTCAACTGAT +
Preference number: 4 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNCPHRP*LHPSTD
Trigger: ATCAGTTGAGGGATGAAGCCACGGACGATGGGGACA...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCCAGAGGCTGATCCGCTaGTCCTTGGAGCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVQRLIR*SLEPAA
Trigger: GGCCGCGGGCTCCAAGGATCAGCGGATCAGCCTCTG...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAAGAAATACCAACCTCATaGAGACAGCGGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: SGWPPESPSCDEALHKRKEIPTS*RQRGLH
Trigger: ATGGAGTCCCCGCTGTCTTCATGAGGTTGGTATTTC...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAGCCTCCCATAAAAGCTaGTGCGTGGGAGCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGASHKS*CVGAKP
Trigger: TGGCTTGGCTCCCACGCATCAGCTTTTATGGGAGGC...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCCCACGACAGCGCTCCTaGCCTCCGCGAGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVPRQRS*PPRGPT
Trigger: TGTGGGACCTCGCGGAGGGCAGGAGCGCTGTCGTGG...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGACTCCCACCTCAAGCCTaGAACTTGGCAATGGAAATT +
Preference number: 4 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRLPPQA*NLAMEI
Trigger: AATTTCCATTGCCAAGTTGCAGGCTTGAGGTGGGAG...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCACTGGCTGCTAAGTCCTaGTCTTGCTGTGTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPLAAKS*SCCVVP
Trigger: GGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAG...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GTCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCCTGGAAACCTGGAAATaGCATGTGGTCCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VRRCFQTPSSLWLERPHCLETWK*HVVLQE
Trigger: CTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAG...GCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGTCCCGACTCCATCCCTaGACACTGAGATTCAGAACA +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKSRLHP*TLRFRT
Trigger: TGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGA...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGTTGCTAGGAAGAGAATaGCAATGTTCAGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARLLGRE*QCSGAS
Trigger: AGATGCACCTGAACATTGGCATTCTCTTCCTAGCAA...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGACAAACTGGGGGTCTaGAGGTGGCGGCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQADKLGV*RWRRAG
Trigger: CCCTGCCCGCCGCCACCTCCAGACCCCCAGTTTGTC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACACGCGGATGCGGTaGTCCCAGCCTGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQANTRMR*SQPAVA
Trigger: GGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTT...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGGCATCTTTTCCAAGCTaGATGTCTGGAGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKASFPS*MSGAET
Trigger: GGTCTCAGCTCCAGACATCCAGCTTGGAAAAGATGC...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGTGTTCTGTGGCTTCTTaGCAGAGACACAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKCSVAS*QRHRWE
Trigger: TTCCCACCTGTGTCTCTGCCAAGAAGCCACAGAACA...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACACGGGAATGGGGATGCTaGCAAATCTGGTATGAAGGT +
Preference number: 4 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTREWGC*QIWYEG
Trigger: ACCTTCATACCAGATTTGCCAGCATCCCCATTCCCG...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
3UTR CAA 72 bp GGGCAGGTGCACAGCAAAGTTTTCACCGGTGCCGGCTaGTTGTCTTCCACGCTGGGATTTCACATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GQVHSKVFTGAG*LSSTLGFHMKF
Trigger: GAACTTCATGTGAAATCCCAGCGTGGAAGACAACAAGCCGGCACCGGTGAAAACTTTGCTGTGCACCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGATCTGGCCGGATCGTaGCCTCGGCGATCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQADLAGS*PRRSRD
Trigger: ATCCCGGGATCGCCGAGGTCACGATCCGGCCAGATC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCGCAAGCCATCGGCGGTaGAGGCCACGCACTGGACAG +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVASHRR*RPRTGQ
Trigger: CTGTCCAGTGCGTGGCCTTCACCGCCGATGGCTTGC...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp GGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAGGGAAACTGCAAAGACGAGAATCTGGATTTaGACAGAAAAAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GADVPLARLSRACRETAKTRIWI*TEKAPS
Trigger: GCTGGGGGCTTTTTCTGTTCAAATCCAGATTCTCGT...CTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCCAAGCCAACGTCTCCTaGAGGCCTCGGACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAQANVS*RPRTAR
Trigger: CCTGGCCGTCCGAGGCCTGCAGGAGACGTTGGCTTG...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp AGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTTACATGTTCAGATTTCTaGCTGGAAACCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: SSRTRSPGGGPKEHRQGLTCSDF*LETWKC
Trigger: GCATTTCCAGGTTTCCAGGCAGAAATCTGAACATGT...AAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCATTCAGAACAAGATGTaGCTGGACACTGCTCAACGC +
Preference number: 4 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAIQNKM*LDTAQR
Trigger: GCGTTGAGCAGTGTCCAGGCACATCTTGTTCTGAAT...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGCTTGAGAGGCCTCACTaGTACCCAAGAGCATTATGG +
Preference number: 4 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWLERPH*YPRALW
Trigger: CCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAG...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCAATAAAAGCTGATGCGTaGGAGCCAAGCCACAGCTCG +
Preference number: 4 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPIKADA*EPSHSS
Trigger: CGAGCTGTGGCTTGGCTCCCACGCATCAGCTTTTAT...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCCGGGAAGGGAGTGGGTaGGTCATGCGCGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAREGSG*VMRVGR
Trigger: TCTACCCACGCGCATGACTCACCCACTCCCTTCCCG...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCACCTGCAGGGCCTGCTaGCAGTCCAGGCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVTCRAC*QSRLQT
Trigger: TGTCTGGAGCCTGGACTGGCAGCAGGCCCTGCAGGT...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAGCACGGCCAGTGGCTaGATCGTCCGCCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQASTASG*IVRQWN
Trigger: GTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCT...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCTGGAGTGGGACCTGCTaGCCCTCTGACAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVWSGTC*PSDSSW
Trigger: CCAGGAGCTGTCAGAGGGGCAGCAGGTCCCACTCCA...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCACACACTGGCCGCCGTaGCCATCCAGGGTGGTAACC +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVTHWPP*PSRVVT
Trigger: GGTTACCACCCTGGATGGCCACGGCGGCCAGTGTGT...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCCAATATTCAGGGTCATaGTTCTTTCCCAATCAACAC +
Preference number: 4 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGQYSGS*FFPNQH
Trigger: GTGTTGATTGGGAAAGAACCATGACCCTGAATATTG...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCCAGGATGCAGTTACCTaGGGCTACGCGAATCGCCCG +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVQDAVT*GYANRP
Trigger: CGGGCGATTCGCGTAGCCTCAGGTAACTGCATCCTG...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCCTTCAGGGCGCACACTaGCGTCTTGGAGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVLQGAH*RLGGHL
Trigger: GAGATGCCCTCCAAGACGTCAGTGTGCGCCCTGAAG...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR TCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCCAAGCCACAGCTCGCTaGCCTGGGGAAGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVQATAR*PGEADR
Trigger: TCTGTCAGCTTCCCCAGGTCAGCGAGCTGTGGCTTG...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCCAGAAGTGCAGCGCATaGACCGGTGACTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAQKCSA*TGDWVP
Trigger: AGGCACCCAGTCACCGGTGCATGCGCTGCACTTCTG...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCGCTCCTTCGCAGAAGTaGAGCGCATGCACCGGTGAC +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVAPSQK*SACTGD
Trigger: GTCACCGGTGCATGCGCTGCACTTCTGCGAAGGAGC...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGCAGGCACATGGGCATaGCCAGCTTGGCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAAGTWA*PAWHLP
Trigger: AGGCAGATGCCAAGCTGGGCATGCCCATGTGCCTGC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCCCTCATGGCAGGCGATaGGGCTGCACACCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAPHGRR*GCTPSA
Trigger: AGCAGAAGGTGTGCAGCCGCATCGCCTGCCATGAGG...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCAGGGGACAGATGTGCTaGTGTTCCCAGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVRGQMC*CSQATC
Trigger: GCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCT...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCAGGGGGCCGTCATGCTaGGCAGGATGCAGTTACCTG +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVRGPSC*AGCSYL
Trigger: CAGGTAACTGCATCCTGCCCAGCATGACGGCCCCCT...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
3UTR CAA 72 bp TCCGCCGTTGTTTCCAAACACCAAGTTCTCTCTGGCTaGAGAGGCCTCACTGCTACCCAAGAGCATTATGGA +
Preference number: 4 (lower is better)
Translates to: SAVVSKHQVLSG*RGLTATQEHYG
Trigger: TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCCAAAGTCAAGGTCCATaGCGGGCTCCTCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAQSQGP*RAPHGR
Trigger: CCTGCCATGAGGAGCCCGTCATGGACCTTGACTTTG...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGGATTGGTGAGTTCATaGGTCCCACGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAGLVSS*VPRTCR
Trigger: CCTGCAGGTGCGTGGGACTCATGAACTCACCAATCC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGAGGCGGGGCAGATGTaGCTTTGGCAAGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAEAGQM*LWQGCQ
Trigger: TTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGACAAACACTCCTTTTGTaGAGAGGGTGTTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGQTLLL*RGCSVA
Trigger: AGCCACAGAACACCCTCTGCACAAAAGGAGTGTTTG...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCTGGGCATGCCCAGCTTaGCATCTGCCTTCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAWACPA*HLPSAS
Trigger: TGAAGCCGAAGGCAGATGCCAAGCTGGGCATGCCCA...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCTGGGCCATGACTTGCTaGTCCTCAGAGGCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAWAMTC*SSEALE
Trigger: CTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCA...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR TCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCATCTGGTATGAAGGTTaGGACCCCGAGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVIWYEG*DPEERQ
Trigger: CTGCCTCTCCTCGGGGTCTCAACCTTCATACCAGAT...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAATAATGGCACCAGGATaGGGCCAAATGACTCGATTT +
Preference number: 4 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGIMAPG*GQMTRF
Trigger: AAATCGAGTCATTTGGCCTCATCCTGGTGCCATTAT...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGGCTCTAGGCACAGCTaGTTGTCTAAGAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAGSRHS*LSKRDP
Trigger: AGGGTCCCTCTTAGACAAGCAGCTGTGCCTAGAGCC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR GCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCTCAGGAGGTCAAGTGTaGATGCAAGAGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQASGGQV*MQEVAG
Trigger: CCCTGCCACCTCTTGCATGCACACTTGACCTCCTGA...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCGCAGAGGGTGTTCTGTaGCTTCTTGGCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVAEGVL*LLGRDT
Trigger: TGTGTCTCTGCCAAGAAGCCACAGAACACCCTCTGC...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGAAATACCAACCTCATaGAGACAGCGGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAEIPTS*RQRGLH
Trigger: ATGGAGTCCCCGCTGTCTTCATGAGGTTGGTATTTC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR GCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCTTGGTAGAGGGCAGGTaGACAGCAAAGTTTTCACCG +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVLVEGR*TAKFSP
Trigger: CGGTGAAAACTTTGCTGTGCACCTGCCCTCTACCAA...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CCA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCCCAGCCTACAGGAAGTaGCTGTTTGCTAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KFIIKYPQLATQQAQANVPAYRK*LFARKR
Trigger: TCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGG...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR TCA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAAAACAAAACAGCTTATaGGCACCTCCTACTAATTTC +
Preference number: 4 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGKQNSL*APPTNF
Trigger: GAAATTAGTAGGAGGTGCTCATAAGCTGTTTTGTTT...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS CCA 90 bp ACCTCGTCGCTGCCCCTCCCTGGCACGGCAAGCGTCCAGCGTGGCTaGCCCCCGGCCAGGATGCTGCTCCGGCAGAAGCCCACACTCTCC +
Preference number: 5 (lower is better)
Translates to: TSSLPLPGTASVQRG*PPARMLLRQKPTLS
Trigger: GGAGAGTGTGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCCGTGCCAGGGAGGGGCAGCGACGAGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS GCA 90 bp GGCCGCCGTGAGGCCAGGCAAGGAGCGGGCGCGGCTTCCCGAGACTaGGAGAACGGCCCAAATGTCTCCAGGTGCCCCCACAAACCCCCG +
Preference number: 5 (lower is better)
Translates to: GRREARQGAGAASRD*ENGPNVSRCPHKPP
Trigger: CGGGGGTTTGTGGGGGCACCTGGAGACATTTGGGCCGTTCTCGCAGTCTCGGGAAGCCGCGCCCGCTCCTTGCCTGGCCTCACGGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000403325.5
ENST00000453108.1
ENST00000481086.1
CDS CCA 90 bp CTGAACCTCGTCGCTGCCCCTCCCTGGCACGGCAAGCGTCCAGCGTaGCTGGCCCCCGGCCAGGATGCTGCTCCGGCAGAAGCCCACACT +
Preference number: 5 (lower is better)
Translates to: LNLVAAPPWHGKRPA*LAPGQDAAPAEAHT
Trigger: AGTGTGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCCGTGCCAGGGAGGGGCAGCGACGAGGTTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS GCA 90 bp ATCAGAAGTCGGGAAAAGACGCAGGGGCGCAGCTCCAGGCCCGCGTaGACGGAGTTCAAGCCGGCCGCCCGGGCTCCCGCCTCCACACTG +
Preference number: 5 (lower is better)
Translates to: IRSREKTQGRSSRPA*TEFKPAARAPASTL
Trigger: CAGTGTGGAGGCGGGAGCCCGGGCGGCCGGCTTGAACTCCGTGCACGCGGGCCTGGAGCTGCGCCCCTGCGTCTTTTCCCGACTTCTGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403325.5
ENST00000453108.1
CDS CCA 90 bp GCGCTGTGGAAGGCCAGCACGGCCAGTGGCTGCATCGTCCGCCAGTaGAACACGCGGATGCGGTGGTCCCAGCCTGCGGTGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: ALWKASTASGCIVRQ*NTRMRWSQPAVARI
Trigger: GATCCTGGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS CCA 90 bp GGCCACGCACTGGACAGCGGCGCTGTGGAAGGCCAGCACGGCCAGTaGCTGCATCGTCCGCCAGTGGAACACGCGGATGCGGTGGTCCCA +
Preference number: 5 (lower is better)
Translates to: GHALDSGAVEGQHGQ*LHRPPVEHADAVVP
Trigger: TGGGACCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGTCCAGTGCGTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS CCA 90 bp TTGGAGCCCGCGGCCAGCAAGCCATCGGCGGTGAAGGCCACGCACTaGACAGCGGCGCTGTGGAAGGCCAGCACGGCCAGTGGCTGCATC +
Preference number: 5 (lower is better)
Translates to: LEPAASKPSAVKATH*TAALWKASTASGCI
Trigger: GATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGTCCAGTGCGTGGCCTTCACCGCCGATGGCTTGCTGGCCGCGGGCTCCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS GCA 90 bp CTGGCACGGCAAGCGTCCAGCGTGGCTGGCCCCCGGCCAGGATGCTaGTCCGGCAGAAGCCCACACTCTCCAAGCACACGGAGTCCACGA +
Preference number: 5 (lower is better)
Translates to: LARQASSVAGPRPGC*SGRSPHSPSTRSPR
Trigger: TCGTGGACTCCGTGTGCTTGGAGAGTGTGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCCGTGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000453108.1
ENST00000460402.5
ENST00000481086.1
CDS GCA 90 bp TCCCTGGCACGGCAAGCGTCCAGCGTGGCTGGCCCCCGGCCAGGATaGTGCTCCGGCAGAAGCCCACACTCTCCAAGCACACGGAGTCCA +
Preference number: 5 (lower is better)
Translates to: SLARQASSVAGPRPG*CSGRSPHSPSTRSP
Trigger: TGGACTCCGTGTGCTTGGAGAGTGTGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCCGTGCCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000453108.1
ENST00000460402.5
ENST00000481086.1
CDS GCA 90 bp GGCGGGAGCTGCAGTCGGCCTGCCACAGCCGCAGGCACATGGGCATaGCCAGCTTGGCATCTGCCTTCGGCTTCAGGGCGCACACTGACG +
Preference number: 5 (lower is better)
Translates to: GGSCSRPATAAGTWA*PAWHLPSASGRTLT
Trigger: CGTCAGTGTGCGCCCTGAAGCCGAAGGCAGATGCCAAGCTGGGCATGCCCATGTGCCTGCGGCTGTGGCAGGCCGACTGCAGCTCCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS GCA 90 bp CCAGCACGGCCAGTGGCTGCATCGTCCGCCAGTGGAACACGCGGATaGGGTGGTCCCAGCCTGCGGTGGCCAGGATCTTGCGATCTGGCC +
Preference number: 5 (lower is better)
Translates to: PARPVAASSASGTRG*GGPSLRWPGSCDLA
Trigger: GGCCAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS GCA 90 bp ACGCACTGGACAGCGGCGCTGTGGAAGGCCAGCACGGCCAGTGGCTaGATCGTCCGCCAGTGGAACACGCGGATGCGGTGGTCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: THWTAALWKASTASG*IVRQWNTRMRWSQP
Trigger: AGGCTGGGACCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGTCCAGTGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS GCA 90 bp GGCGCGGCTTCCCGAGACTGCGAGAACGGCCCAAATGTCTCCAGGTaGCCCCACAAACCCCCGGCGCGGACCGAGAAACTGAGGCCCGCA +
Preference number: 5 (lower is better)
Translates to: GAASRDCENGPNVSR*PHKPPARTEKLRPA
Trigger: TGCGGGCCTCAGTTTCTCGGTCCGCGCCGGGGGTTTGTGGGGGCACCTGGAGACATTTGGGCCGTTCTCGCAGTCTCGGGAAGCCGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403325.5
ENST00000453108.1
ENST00000481086.1
CDS TCA 90 bp CCCCTGAGCCTGGGCTCCTTCGCAGAAGTGCAGCGCATGCACCGGTaGCTGGGTGCCTCGGAGGACAAACTGGGGGTCTGGAGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: PLSLGSFAEVQRMHR*LGASEDKLGVWRWR
Trigger: CCGCCACCTCCAGACCCCCAGTTTGTCCTCCGAGGCACCCAGTCACCGGTGCATGCGCTGCACTTCTGCGAAGGAGCCCAGGCTCAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000453108.1
CDS GCA 90 bp CTGCATCGTCCGCCAGTGGAACACGCGGATGCGGTGGTCCCAGCCTaGGGTGGCCAGGATCTTGCGATCTGGCCGGATCGTGACCTCGGC +
Preference number: 5 (lower is better)
Translates to: LHRPPVEHADAVVPA*GGQDLAIWPDRDLG
Trigger: GCCGAGGTCACGATCCGGCCAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS CCA 90 bp ACGGCCAGTGGCTGCATCGTCCGCCAGTGGAACACGCGGATGCGGTaGTCCCAGCCTGCGGTGGCCAGGATCTTGCGATCTGGCCGGATC +
Preference number: 5 (lower is better)
Translates to: TASGCIVRQWNTRMR*SQPAVARILRSGRI
Trigger: GATCCGGCCAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS CCA 90 bp AGCAAGCCATCGGCGGTGAAGGCCACGCACTGGACAGCGGCGCTGTaGAAGGCCAGCACGGCCAGTGGCTGCATCGTCCGCCAGTGGAAC +
Preference number: 5 (lower is better)
Translates to: SKPSAVKATHWTAAL*KASTASGCIVRQWN
Trigger: GTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGTCCAGTGCGTGGCCTTCACCGCCGATGGCTTGCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS-3UTR CAA 90 bp CAGGCCAGTACCCGAGCCAGGTGGTCTCCAAGCTTGGGCCAGGGGCCGCTTTCCGCTGTGACTGTGGCCTaGGCCACTGTGAGGCGGTGC +
Preference number: 5 (lower is better)
Translates to: QASTRARWSPSLGQGPLSAVTVA*ATVRRC
Trigger: GCACCGCCTCACAGTGGCCAAGGCCACAGTCACAGC...GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCTGGCTCGGGTACTGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS GCA 90 bp AGAAGCCCACACTCTCCAAGCACACGGAGTCCACGACAGCGCTCCTaGCCTCCGCGAGGTCCCACAGGCACAGCTTCAGGTCCCGGCCCT +
Preference number: 5 (lower is better)
Translates to: RSPHSPSTRSPRQRS*PPRGPTGTASGPGP
Trigger: AGGGCCGGGACCTGAAGCTGTGCCTGTGGGACCTCGCGGAGGGCAGGAGCGCTGTCGTGGACTCCGTGTGCTTGGAGAGTGTGGGCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000453108.1
ENST00000460402.5
ENST00000481086.1
CDS-3UTR CAA 90 bp TTTCCCAATCAACACCCGCTTTTAGGAGGAGACGACCGGCCAGGCTGGGCCCGGGGGCACGTGGCCCCGTaGTGCACTGGAGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: FPNQHPLLGGDDRPGWARGHVAP*CTGGVR
Trigger: CCTCACCCCTCCAGTGCACAACGGGGCCACGTGCCC...CCGGGCCCAGCCTGGCCGGTCGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS CCA 90 bp GCGGATGCGGTGGTCCCAGCCTGCGGTGGCCAGGATCTTGCGATCTaGCCGGATCGTGACCTCGGCGATCCCGGGATTGGTGAGTTCATG +
Preference number: 5 (lower is better)
Translates to: ADAVVPACGGQDLAI*PDRDLGDPGIGEFM
Trigger: CATGAACTCACCAATCCCGGGATCGCCGAGGTCACGATCCGGCCAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACCACCGCATCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS-3UTR CAA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAAGGGCTGCACTGCTCTaGGCCGGCTTGGACCCCAGC +
Preference number: 5 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHARAALL*AGLDPS
Trigger: GCTGGGGTCCAAGCCGGCCAAGAGCAGTGCAGCCCT...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS TCA 90 bp TCGTCTCCCGGGAAGGGAGTGGGTGAGTCATGCGCGTGGGTAGAGTaGCCAGAGGCTGATCCGCTGATCCTTGGAGCCCGCGGCCAGCAA +
Preference number: 5 (lower is better)
Translates to: SSPGKGVGESCAWVE*PEADPLILGARGQQ
Trigger: TTGCTGGCCGCGGGCTCCAAGGATCAGCGGATCAGCCTCTGGTCACTCTACCCACGCGCATGACTCACCCACTCCCTTCCCGGGAGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS GCA 90 bp TTGCTGGTCCTCAGAGGCCGGGCTCCTCATGGCAGGCGATGCGGCTaGACACCTTCTGCTCAGAGACGTCCCACAGGACCACCGATCCAT +
Preference number: 5 (lower is better)
Translates to: LLVLRGRAPHGRRCG*TPSAQRRPTGPPIH
Trigger: ATGGATCGGTGGTCCTGTGGGACGTCTCTGAGCAGAAGGTGTGCAGCCGCATCGCCTGCCATGAGGAGCCCGGCCTCTGAGGACCAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405009.5
CDS-3UTR CAA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCGGTCCTCAGAGGCCCTaGAGGTTTCAGGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: HLPASADPSVSTCQAQSAGPQRP*RFQAKA
Trigger: AGCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACC...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATTGGGGAGGCACGGCCTaGGGACCCCCTGCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNWGGTA*GPPAVG
Trigger: ACCCACTGCAGGGGGTCCCAAGGCCGTGCCTCCCCA...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp AGTTCTAGGACTAGAAGCCCAGGTGGGGGTCCCAAGGAGCATCGGCAGGGCCTTACCTGGTGGCCACCCTaGTCCAACGGAGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: SSRTRSPGGGPKEHRQGLTWWPP*SNGARP
Trigger: TGGCCTGGCTCCGTTGGACAAGGGTGGCCACCAGGT...AAGGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS TCA 90 bp GGGCATGCCCAGCTTGGCATCTGCCTTCGGCTTCAGGGCGCACACTaGCGTCTTGGAGGGCATCTCCAGAATCTGAACCTCGTCGCTGCC +
Preference number: 5 (lower is better)
Translates to: GHAQLGICLRLQGAH*RLGGHLQNLNLVAA
Trigger: GGCAGCGACGAGGTTCAGATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCGCCCTGAAGCCGAAGGCAGATGCCAAGCTGGGCATGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS CCA 90 bp CCAGCTTGGCATCTGCCTTCGGCTTCAGGGCGCACACTGACGTCTTaGAGGGCATCTCCAGAATCTGAACCTCGTCGCTGCCCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PAWHLPSASGRTLTS*RASPESEPRRCPSL
Trigger: CAGGGAGGGGCAGCGACGAGGTTCAGATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCGCCCTGAAGCCGAAGGCAGATGCCAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS-3UTR CAA 90 bp GTGGGAGCTGAGGCGGGGCAGATGTGCCTTTGGCAAGGCTGTCAAGGGCATGCAATGGGCATGCCCAGCTaGGCATCTGCCTTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: VGAEAGQMCLWQGCQGHAMGMPS*ASAFGF
Trigger: GAAGCCGAAGGCAGATGCCAAGCTGGGCATGCCCAT...TGCATGCCCTTGACAGCCTTGCCAAAGGCACATCTGCCCCGCCTCAGCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGATTCCTCACAGTGGGGTaGGGGAGGCACGGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRFLTVG*GRHGLG
Trigger: CCCAAGGCCGTGCCTCCCCAACCCCACTGTGAGGAA...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCCACCCTGACGCAGCCTaGTGGGGCCCTGAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: DFCLETWKCHVVLQEAGAHPDAA*WGPEQR
Trigger: CCTCTGCTCAGGGCCCCACAAGGCTGCGTCAGGGTG...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCTTCACCGGTGCCGGCTaGTTGTCTTCCACGCTGGGA +
Preference number: 5 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSFTGAG*LSSTLG
Trigger: TCCCAGCGTGGAAGACAACAAGCCGGCACCGGTGAA...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS TCA 90 bp AGCCTGAGATGCCCCTGGCCTTCTGGGAGTCAAAGTCAAGGTCCATaGCGGGCTCCTCATGGCAGGCGATGCGGCTGCACACCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SLRCPWPSGSQSQGP*RAPHGRRCGCTPSA
Trigger: AGCAGAAGGTGTGCAGCCGCATCGCCTGCCATGAGGAGCCCGTCATGGACCTTGACTTTGACTCCCAGAAGGCCAGGGGCATCTCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
ENST00000481086.1
CDS TCA 90 bp TACCAACCTCATGAAGACAGCGGGGACTCCATGGTCCTTGGGCCATaGCTTGCTGGTCCTCAGAGGCCGGGCTCCTCATGGCAGGCGATG +
Preference number: 5 (lower is better)
Translates to: YQPHEDSGDSMVLGP*LAGPQRPGSSWQAM
Trigger: CATCGCCTGCCATGAGGAGCCCGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGTCTTCATGAGGTTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405009.5
CDS CCA 90 bp CTGGCCTTCTGGGAGTCAAAGTCAAGGTCCATGACGGGCTCCTCATaGCAGGCGATGCGGCTGCACACCTTCTGCTCAGAGACGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LAFWESKSRSMTGSS*QAMRLHTFCSETSH
Trigger: GTGGGACGTCTCTGAGCAGAAGGTGTGCAGCCGCATCGCCTGCCATGAGGAGCCCGTCATGGACCTTGACTTTGACTCCCAGAAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
ENST00000481086.1
CDS-3UTR CAA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCGCGCACACTGACGTCTaGGAGGGCATCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSAHTDV*EGISRI
Trigger: GATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCGC...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCATGGGCATGCCCAGCTaGGCATCTGCCTTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGMGMPS*ASAFGF
Trigger: GAAGCCGAAGGCAGATGCCAAGCTGGGCATGCCCAT...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CAA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACAGCGGTGGCCAGGATCTaGCGATCTGGCCGGATCGTG +
Preference number: 5 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTAVARI*RSGRIV
Trigger: CACGATCCGGCCAGATCGCAAGATCCTGGCCACCGC...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCGGTCCTCAGAGGCCCTaGAGGTTTCAGGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGGPQRP*RFQAKA
Trigger: AGCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACC...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CAA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGAAGCATCGGCAGGGCCTaGCAGGGCAACTGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRSIGRA*QGNCLK
Trigger: CTTGAGGCAGTTGCCCTGCAAGGCCCTGCCGATGCT...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCAGGTGGTCTCCAAGCTaGGGCCAGGGGCCGCTTTCC +
Preference number: 5 (lower is better)
Translates to: DFCLETWKCHVVLQEAGARWSPS*GQGPLS
Trigger: GGAAAGCGGCCCCTGGCCCAAGCTTGGAGACCACCT...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp AAACCCACACTCGGGGTGGCCCATTCAACAGCAGGTGTGAGGGTGGGGCTGAGCGGGAGGATCGATCGCTaGAGCCCAGGAGTTCGAAAC +
Preference number: 5 (lower is better)
Translates to: KPTLGVAHSTAGVRVGLSGRIDR*SPGVRN
Trigger: GTTTCGAACTCCTGGGCTCAAGCGATCGATCCTCCC...GCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp TCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAACTAAGAGGGACCCTGTaGGCGGCGCAACGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SGWPPESPSCDEALHKRKLRGTL*AAQRWV
Trigger: CACCCAGCGTTGCGCCGCCAACAGGGTCCCTCTTAG...TTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp ACCCTGCCGCTGTCATGGGGATGTCAGAACCTGACACCTTCCCTCACTGTGACACACACCCTGTGGCCGTaGTCCCCATCGTCCGTGGCT +
Preference number: 5 (lower is better)
Translates to: TLPLSWGCQNLTPSLTVTHTLWP*SPSSVA
Trigger: AGCCACGGACGATGGGGACAACGGCCACAGGGTGTG...TGTCACAGTGAGGGAAGGTGTCAGGTTCTGACATCCCCATGACAGCGGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CCTTGGGCCATGACTTGCTGGTCCTCAGAGGCCCTTGAGGTTTCAGGCCAAGGCGCGCACACTGACGTCTaGGAGGGCATCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: PWAMTCWSSEALEVSGQGAHTDV*EGISRI
Trigger: GATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCGC...GCCTTGGCCTGAAACCTCAAGGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CAA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGCTGCTCTTGGCCGGCTaGGACCCCAGCACCGGTTCT +
Preference number: 5 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWLLLAG*DPSTGS
Trigger: AGAACCGGTGCTGGGGTCCAAGCCGGCCAAGAGCAG...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp ACCGGAGGCAGCGGCTGGGGATGCTGGAGCATACGGCTCCAGCCACTCAGGATCGTGCAAACACTCCTTTaGTGCAGAGGGTGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: TGGSGWGCWSIRLQPLRIVQTLL*CRGCSV
Trigger: CACAGAACACCCTCTGCACAAAAGGAGTGTTTGCAC...GATCCTGAGTGGCTGGAGCCGTATGCTCCAGCATCCCCAGCCGCTGCCTCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CATCTCCCGGCATCGGCTGACCCCTCGGTGTCTACGTGCCAAGCCCAATCTGCCAGGCAGGAGGATCACTaGAGCCTATTAGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: HLPASADPSVSTCQAQSARQEDH*SLLVGG
Trigger: GCCTCCAACTAATAGGCTCAAGTGATCCTCCTGCCT...GGCAGATTGGGCTTGGCACGTAGACACCGAGGGGTCAGCCGATGCCGGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAACCGTTTCTTCTTCTGTaGTGGGGGTTTCAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: QGSGWPPESPSCDEALHKPFLLL*WGFQGW
Trigger: CCAGCCTTGAAACCCCCACAACAGAAGAAGAAACGG...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATTCACTGCTGGCTCTGTaGGCGTTCCTGCCAGCCTAC +
Preference number: 5 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNSLLAL*AFLPAY
Trigger: GTAGGCTGGCAGGAACGCCAACAGAGCCAGCAGTGA...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGCAGGAGAATCGCTaGAACCTGGGAATCAGAGGT +
Preference number: 5 (lower is better)
Translates to: QGSGWPPESPSCDEALHKRQENR*NLGIRG
Trigger: ACCTCTGATTCCCAGGTTCAAGCGATTCTCCTGCCT...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CAGGGCTCTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAATCTAGGCACAGCTGCTaGTCTAAGAGGGACCCTGTT +
Preference number: 5 (lower is better)
Translates to: QGSGWPPESPSCDEALHKSRHSC*SKRDPV
Trigger: AACAGGGTCCCTCTTAGACAAGCAGCTGTGCCTAGA...TTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAGAGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp GATTTCTGCCTGGAAACCTGGAAATGCCATGTGGTCCTGCAGGAGGCTGGTGCCACGACCCAGGTTCTGTaGACACAAAGGCCGACCTGT +
Preference number: 5 (lower is better)
Translates to: DFCLETWKCHVVLQEAGATTQVL*TQRPTC
Trigger: ACAGGTCGGCCTTTGTGTCAACAGAACCTGGGTCGT...GGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCAGCTTGTCACACTCCCTaGCTGCTCTCGTGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPACHTP*LLSCLL
Trigger: CAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGC...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCAACCCTGCTTGTGCCTTaGACTGAAAGCACGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPTLLVP*TESTRA
Trigger: GGCCCTCGTGCTTTCAGTCAAAGGCACAAGCAGGGT...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp TTGGCGTTCCTGCCAGCCTACAGGAAGTGGCTGTTTGCTAGGAAGAGAATGCCAACCGGTGCCGGCTTGTaGTCTTCCACGCTGGGATTT +
Preference number: 5 (lower is better)
Translates to: LAFLPAYRKWLFARKRMPTGAGL*SSTLGF
Trigger: AAATCCCAGCGTGGAAGACAACAAGCCGGCACCGGT...TGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAACGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp ACCTGTCCAGAGCCACATGGCTCTGCTGTGGACACCACGGAGCAGCTCAAGAGACACGAGAATCTGGATTaGAACAGAAAAAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: TCPEPHGSAVDTTEQLKRHENLD*NRKSPQ
Trigger: CTGGGGGCTTTTTCTGTTCAAATCCAGATTCTCGTG...TCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCGCGGTGGCCAGGATCTaGCGATCTGGCCGGATCGTG +
Preference number: 5 (lower is better)
Translates to: KFIIKYPQLATQQAQANVAVARI*RSGRIV
Trigger: CACGATCCGGCCAGATCGCAAGATCCTGGCCACCGC...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329517.11
ENST00000403325.5
CDS-3UTR CAA 90 bp CTGGCTGGCCCCCAGAGTCACCGTCCTGTGATGAGGCACTCCACAAAAGGAAATACAGGAAGTGGCTGTTaGCTAGGAAGAGAATGCCAA +
Preference number: 5 (lower is better)
Translates to: LAGPQSHRPVMRHSTKGNTGSGC*LGRECQ
Trigger: TTGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGT...ATTTCCTTTTGTGGAGTGCCTCATCACAGGACGGTGACTCTGGGGGCCAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CTGCAAAGCCAATTCCCACTCCACCTACCCTGCCGCTGTCATGGGGATGTCAGAAGAACCCCCGGAGGGTaGTTTTTCTTTGTGCAAACA +
Preference number: 5 (lower is better)
Translates to: LQSQFPLHLPCRCHGDVRRTPGG*FFFVQT
Trigger: TGTTTGCACAAAGAAAAACAACCCTCCGGGGGTTCT...TCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CAATGGAAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCGGTGGGGCTGGCAGCTaGGTAGAGGGCAGGTGCACA +
Preference number: 5 (lower is better)
Translates to: QWKFIIKYPQLATQQAQAGGAGS*VEGRCT
Trigger: TGTGCACCTGCCCTCTACCAAGCTGCCAGCCCCACC...GGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTTCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp ACGCTGTCCCGACTCCATCCCTGCACACTGAGATTCAGAACAAGATGTGCCTGGAAGAAATGTCCGCCGTaGTTTCCAAACACCAAGTTC +
Preference number: 5 (lower is better)
Translates to: TLSRLHPCTLRFRTRCAWKKCPP*FPNTKF
Trigger: GAACTTGGTGTTTGGAAACAACGGCGGACATTTCTT...CCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCGCGCACACTGACGTCTaGGAGGGCATCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KFIIKYPQLATQQAQANVAHTDV*EGISRI
Trigger: GATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCGC...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS-3UTR CAA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGAACACACCTACCTGAGTaGGCACTGAAAATGGCAAGA +
Preference number: 5 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGTHLPE*ALKMAR
Trigger: TCTTGCCATTTTCAGTGCCAACTCAGGTAGGTGTGT...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp AAATTTATTATAAAATACCCTCAGCTGGCAACACAGCAGGCCCAAGCCAACGTCGTGTTCTGTGGCTTCTaGGCAGAGACACAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: KFIIKYPQLATQQAQANVVFCGF*AETQVG
Trigger: TCCCACCTGTGTCTCTGCCAAGAAGCCACAGAACAC...GACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGTATTTTATAATAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS-3UTR CAA 90 bp CACCAAGTTCTCTCTGGCTTGAGAGGCCTCACTGCTACCCAAGAGCATTATGGACCTCAAGCCTGCAACTaGGCAATGGAAATTTATTAT +
Preference number: 5 (lower is better)
Translates to: HQVLSGLRGLTATQEHYGPQACN*AMEIYY
Trigger: ATAATAAATTTCCATTGCCAAGTTGCAGGCTTGAGG...TCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329517.11
CDS CCA 72 bp CTGCCCCTCCCTGGCACGGCAAGCGTCCAGCGTGGCTaGCCCCCGGCCAGGATGCTGCTCCGGCAGAAGCCC +
Preference number: 6 (lower is better)
Translates to: LPLPGTASVQRG*PPARMLLRQKP
Trigger: GGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCCGTGCCAGGGAGGGGCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS CCA 72 bp GTCGCTGCCCCTCCCTGGCACGGCAAGCGTCCAGCGTaGCTGGCCCCCGGCCAGGATGCTGCTCCGGCAGAA +
Preference number: 6 (lower is better)
Translates to: VAAPPWHGKRPA*LAPGQDAAPAE
Trigger: TTCTGCCGGAGCAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCCGTGCCAGGGAGGGGCAGCGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS GCA 72 bp CGGACCGAGAAACTGAGGCCCGCAGACCGAAGGCACTaGGACCCAGGCTGGGGCTCCGAGTGCCCCTCTGCG +
Preference number: 6 (lower is better)
Translates to: RTEKLRPADRRH*DPGWGSECPSA
Trigger: CGCAGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTGCCTTCGGTCTGCGGGCCTCAGTTTCTCGGTCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403325.5
ENST00000453108.1
ENST00000481086.1
CDS CCA 72 bp TCGGCGGTGAAGGCCACGCACTGGACAGCGGCGCTGTaGAAGGCCAGCACGGCCAGTGGCTGCATCGTCCGC +
Preference number: 6 (lower is better)
Translates to: SAVKATHWTAAL*KASTASGCIVR
Trigger: GCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGTCCAGTGCGTGGCCTTCACCGCCGA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS CCA 72 bp GCGGCCAGCAAGCCATCGGCGGTGAAGGCCACGCACTaGACAGCGGCGCTGTGGAAGGCCAGCACGGCCAGT +
Preference number: 6 (lower is better)
Translates to: AASKPSAVKATH*TAALWKASTAS
Trigger: ACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGTCCAGTGCGTGGCCTTCACCGCCGATGGCTTGCTGGCCGC
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS TCA 72 bp GATCCTTGGAGCCCGCGGCCAGCAAGCCATCGGCGGTaGAGGCCACGCACTGGACAGCGGCGCTGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: DPWSPRPASHRR*RPRTGQRRCGR
Trigger: CCTTCCACAGCGCCGCTGTCCAGTGCGTGGCCTTCACCGCCGATGGCTTGCTGGCCGCGGGCTCCAAGGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS GCA 72 bp CAAGCGTCCAGCGTGGCTGGCCCCCGGCCAGGATGCTaGTCCGGCAGAAGCCCACACTCTCCAAGCACACGG +
Preference number: 6 (lower is better)
Translates to: QASSVAGPRPGC*SGRSPHSPSTR
Trigger: CCGTGTGCTTGGAGAGTGTGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000453108.1
ENST00000460402.5
ENST00000481086.1
CDS GCA 72 bp CGGCAAGCGTCCAGCGTGGCTGGCCCCCGGCCAGGATaGTGCTCCGGCAGAAGCCCACACTCTCCAAGCACA +
Preference number: 6 (lower is better)
Translates to: RQASSVAGPRPG*CSGRSPHSPST
Trigger: TGTGCTTGGAGAGTGTGGGCTTCTGCCGGAGCAGCATCCTGGCCGGGGGCCAGCCACGCTGGACGCTTGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000453108.1
ENST00000460402.5
ENST00000481086.1
CDS GCA 72 bp ACAGCGGCGCTGTGGAAGGCCAGCACGGCCAGTGGCTaGATCGTCCGCCAGTGGAACACGCGGATGCGGTGG +
Preference number: 6 (lower is better)
Translates to: TAALWKASTASG*IVRQWNTRMRW
Trigger: CCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS GCA 72 bp GAGGCCAGGCAAGGAGCGGGCGCGGCTTCCCGAGACTaGGAGAACGGCCCAAATGTCTCCAGGTGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: EARQGAGAASRD*ENGPNVSRCPH
Trigger: GTGGGGGCACCTGGAGACATTTGGGCCGTTCTCGCAGTCTCGGGAAGCCGCGCCCGCTCCTTGCCTGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000403325.5
ENST00000453108.1
ENST00000481086.1
CDS CCA 72 bp GGCAGCGTCTGCAGCCAGGTCACACACTGGCCGCCGTaGCCATCCAGGGTGGTAACCGCTCTCCGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: GSVCSQVTHWPP*PSRVVTALRVC
Trigger: GCAGACGCGGAGAGCGGTTACCACCCTGGATGGCCACGGCGGCCAGTGTGTGACCTGGCTGCAGACGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
CDS CCA 72 bp CATCTCCAGAATCTGAACCTCGTCGCTGCCCCTCCCTaGCACGGCAAGCGTCCAGCGTGGCTGGCCCCCGGC +
Preference number: 6 (lower is better)
Translates to: HLQNLNLVAAPP*HGKRPAWLAPG
Trigger: GCCGGGGGCCAGCCACGCTGGACGCTTGCCGTGCCAGGGAGGGGCAGCGACGAGGTTCAGATTCTGGAGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS CCA 72 bp CTGGACAGCGGCGCTGTGGAAGGCCAGCACGGCCAGTaGCTGCATCGTCCGCCAGTGGAACACGCGGATGCG +
Preference number: 6 (lower is better)
Translates to: LDSGAVEGQHGQ*LHRPPVEHADA
Trigger: CGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGTCCAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS GCA 72 bp CCGCCAGTGGAACACGCGGATGCGGTGGTCCCAGCCTaGGGTGGCCAGGATCTTGCGATCTGGCCGGATCGT +
Preference number: 6 (lower is better)
Translates to: PPVEHADAVVPA*GGQDLAIWPDR
Trigger: ACGATCCGGCCAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACTGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS CCA 72 bp GACCACCGATCCATCCTCATAGCCGGCCAGAAGGAGTaGGCGGGAGCTGCAGTCGGCCTGCCACAGCCGCAG +
Preference number: 6 (lower is better)
Translates to: DHRSILIAGQKE*AGAAVGLPQPQ
Trigger: CTGCGGCTGTGGCAGGCCGACTGCAGCTCCCGCCCACTCCTTCTGGCCGGCTATGAGGATGGATCGGTGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS CAA 90 bp TGGAACACGCGGATGCGGTGGTCCCAGCCTGCGGTGGCCAGGATCTaGCGATCTGGCCGGATCGTGACCTCGGCGATCCCGGGATTGGTG +
Preference number: 6 (lower is better)
Translates to: WNTRMRWSQPAVARI*RSGRIVTSAIPGLV
Trigger: CACCAATCCCGGGATCGCCGAGGTCACGATCCGGCCAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS CCA 72 bp GTGGTCCCAGCCTGCGGTGGCCAGGATCTTGCGATCTaGCCGGATCGTGACCTCGGCGATCCCGGGATTGGT +
Preference number: 6 (lower is better)
Translates to: VVPACGGQDLAI*PDRDLGDPGIG
Trigger: ACCAATCCCGGGATCGCCGAGGTCACGATCCGGCCAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS CCA 72 bp GGCTGCATCGTCCGCCAGTGGAACACGCGGATGCGGTaGTCCCAGCCTGCGGTGGCCAGGATCTTGCGATCT +
Preference number: 6 (lower is better)
Translates to: GCIVRQWNTRMR*SQPAVARILRS
Trigger: AGATCGCAAGATCCTGGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS TCA 72 bp CTGGGCTCCTTCGCAGAAGTGCAGCGCATGCACCGGTaGCTGGGTGCCTCGGAGGACAAACTGGGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: LGSFAEVQRMHR*LGASEDKLGVW
Trigger: CCAGACCCCCAGTTTGTCCTCCGAGGCACCCAGTCACCGGTGCATGCGCTGCACTTCTGCGAAGGAGCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000453108.1
CDS GCA 72 bp CACTCTCCAAGCACACGGAGTCCACGACAGCGCTCCTaGCCTCCGCGAGGTCCCACAGGCACAGCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: HSPSTRSPRQRS*PPRGPTGTASG
Trigger: ACCTGAAGCTGTGCCTGTGGGACCTCGCGGAGGGCAGGAGCGCTGTCGTGGACTCCGTGTGCTTGGAGAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000453108.1
ENST00000460402.5
ENST00000481086.1
CDS GCA 72 bp CTCAGAGGCCGGGCTCCTCATGGCAGGCGATGCGGCTaGACACCTTCTGCTCAGAGACGTCCCACAGGACCA +
Preference number: 6 (lower is better)
Translates to: LRGRAPHGRRCG*TPSAQRRPTGP
Trigger: TGGTCCTGTGGGACGTCTCTGAGCAGAAGGTGTGCAGCCGCATCGCCTGCCATGAGGAGCCCGGCCTCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405009.5
CDS GCA 72 bp CTGGTCCTCAGAGGCCGGGCTCCTCATGGCAGGCGATaGGGCTGCACACCTTCTGCTCAGAGACGTCCCACA +
Preference number: 6 (lower is better)
Translates to: LVLRGRAPHGRR*GCTPSAQRRPT
Trigger: TGTGGGACGTCTCTGAGCAGAAGGTGTGCAGCCGCATCGCCTGCCATGAGGAGCCCGGCCTCTGAGGACCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405009.5
CDS GCA 72 bp GACCGAAGGCACTGCGACCCAGGCTGGGGCTCCGAGTaGCCCTCTGCGGATCAGAAGTCGGGAAAAGACGCA +
Preference number: 6 (lower is better)
Translates to: DRRHCDPGWGSE*PSADQKSGKDA
Trigger: TGCGTCTTTTCCCGACTTCTGATCCGCAGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTGCCTTCGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000403325.5
ENST00000453108.1
ENST00000481086.1
CDS GCA 72 bp TCCCGAGACTGCGAGAACGGCCCAAATGTCTCCAGGTaGCCCCACAAACCCCCGGCGCGGACCGAGAAACTG +
Preference number: 6 (lower is better)
Translates to: SRDCENGPNVSR*PHKPPARTEKL
Trigger: CAGTTTCTCGGTCCGCGCCGGGGGTTTGTGGGGGCACCTGGAGACATTTGGGCCGTTCTCGCAGTCTCGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000403325.5
ENST00000453108.1
ENST00000481086.1
CDS GCA 72 bp CACCGAAGGCACTGCGACCCAGGCTGGGGCTCCGAGTaGCCCTCTGCGGATCAGAAGTCGGGAAAAGACGCA +
Preference number: 6 (lower is better)
Translates to: HRRHCDPGWGSE*PSADQKSGKDA
Trigger: TGCGTCTTTTCCCGACTTCTGATCCGCAGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTGCCTTCGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460402.5
CDS CCA 72 bp CAGCGGGGACTCCATGGTCCTTGGGCCATGACTTGCTaGTCCTCAGAGGCCGGGCTCCTCATGGCAGGCGAT +
Preference number: 6 (lower is better)
Translates to: QRGLHGPWAMTC*SSEAGLLMAGD
Trigger: ATCGCCTGCCATGAGGAGCCCGGCCTCTGAGGACCAGCAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405009.5
CDS TCA 72 bp ATCGTGACCTCGGCGATCCCGGGATTGGTGAGTTCATaGGTCCCACGCACCTGCAGGGCCTGCTGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: IVTSAIPGLVSS*VPRTCRACCQS
Trigger: GGACTGGCAGCAGGCCCTGCAGGTGCGTGGGACTCATGAACTCACCAATCCCGGGATCGCCGAGGTCACGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS TCA 72 bp GGGAAGGGAGTGGGTGAGTCATGCGCGTGGGTAGAGTaGCCAGAGGCTGATCCGCTGATCCTTGGAGCCCGC +
Preference number: 6 (lower is better)
Translates to: GKGVGESCAWVE*PEADPLILGAR
Trigger: GCGGGCTCCAAGGATCAGCGGATCAGCCTCTGGTCACTCTACCCACGCGCATGACTCACCCACTCCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
CDS GCA 72 bp GGCTCCTCATGGCAGGCGATGCGGCTGCACACCTTCTaGTCAGAGACGTCCCACAGGACCACCGATCCATCC +
Preference number: 6 (lower is better)
Translates to: GSSWQAMRLHTF*SETSHRTTDPS
Trigger: GGATGGATCGGTGGTCCTGTGGGACGTCTCTGAGCAGAAGGTGTGCAGCCGCATCGCCTGCCATGAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS CCA 72 bp GCTCCTTCGCAGAAGTGCAGCGCATGCACCGGTGACTaGGTGCCTCGGAGGACAAACTGGGGGTCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: APSQKCSACTGD*VPRRTNWGSGG
Trigger: ACCTCCAGACCCCCAGTTTGTCCTCCGAGGCACCCAGTCACCGGTGCATGCGCTGCACTTCTGCGAAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000453108.1
CDS TCA 72 bp TGCCCCTGGCCTTCTGGGAGTCAAAGTCAAGGTCCATaGCGGGCTCCTCATGGCAGGCGATGCGGCTGCACA +
Preference number: 6 (lower is better)
Translates to: CPWPSGSQSQGP*RAPHGRRCGCT
Trigger: TGTGCAGCCGCATCGCCTGCCATGAGGAGCCCGTCATGGACCTTGACTTTGACTCCCAGAAGGCCAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
ENST00000481086.1
CDS CCA 72 bp CATCTGCCTTCGGCTTCAGGGCGCACACTGACGTCTTaGAGGGCATCTCCAGAATCTGAACCTCGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: HLPSASGRTLTS*RASPESEPRRC
Trigger: GCAGCGACGAGGTTCAGATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCGCCCTGAAGCCGAAGGCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1
CDS CCA 72 bp TGGGAGTCAAAGTCAAGGTCCATGACGGGCTCCTCATaGCAGGCGATGCGGCTGCACACCTTCTGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: WESKSRSMTGSS*QAMRLHTFCSE
Trigger: CTCTGAGCAGAAGGTGTGCAGCCGCATCGCCTGCCATGAGGAGCCCGTCATGGACCTTGACTTTGACTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000460402.5
ENST00000481086.1
CDS TCA 72 bp CAGCTTGGCATCTGCCTTCGGCTTCAGGGCGCACACTaGCGTCTTGGAGGGCATCTCCAGAATCTGAACCTC +
Preference number: 6 (lower is better)
Translates to: QLGICLRLQGAH*RLGGHLQNLNL
Trigger: GAGGTTCAGATTCTGGAGATGCCCTCCAAGACGTCAGTGTGCGCCCTGAAGCCGAAGGCAGATGCCAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329517.11
ENST00000403325.5
ENST00000405009.5
ENST00000460402.5
ENST00000481086.1