RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNAL (Homo sapiens)

Ensembl gene IDs: ENSG00000141404

Ensembl transcript IDs: ENST00000269162.9, ENST00000334049.11, ENST00000423027.8, ENST00000535121.5, ENST00000585590.1, ENST00000585642.5, ENST00000586926.1, ENST00000590228.1, ENST00000590972.1, ENST00000602628.1

Found 527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCTGGTCGGGGGTGAGCTGTGCAGGGAGAAGGCTGGGCCCCCTTaGTCTCAGGTGAGGAGGGCCCGTTCCCTGCCTCACCTGAGGGGG +
Preference number: 1 (lower is better)
Translates to: GLVGGELCREKAGPP*SQVRRARSLPHLRG
Trigger: CCCCCTCAGGTGAGGCAGGGAACGGGCCCTCCTCACCTGAGACCAAGGGGGCCCAGCCTTCTCCCTGCACAGCTCACCCCCGACCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 90 bp AGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTaGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGG +
Preference number: 1 (lower is better)
Translates to: SEMELETLPPTMAWG*QSGSPGRRSVAGWR
Trigger: CCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR CCA 90 bp GACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATaGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGG +
Preference number: 1 (lower is better)
Translates to: DGSEMELETLPPTMA*GWQSGSPGRRSVAG
Trigger: CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR GCA 90 bp TACTTGTCTCTCCTGCTGGAGCCTGGGCTGGTCGGGGGTGAGCTGTaGAGGGAGAAGGCTGGGCCCCCTTGGTCTCAGGTGAGGAGGGCC +
Preference number: 1 (lower is better)
Translates to: YLSLLLEPGLVGGEL*REKAGPPWSQVRRA
Trigger: GGCCCTCCTCACCTGAGACCAAGGGGGCCCAGCCTTCTCCCTGCACAGCTCACCCCCGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 90 bp CAGGCACACTTGGGCCTTACTTGTCTCTCCTGCTGGAGCCTGGGCTaGTCGGGGGTGAGCTGTGCAGGGAGAAGGCTGGGCCCCCTTGGT +
Preference number: 1 (lower is better)
Translates to: QAHLGLTCLSCWSLG*SGVSCAGRRLGPLG
Trigger: ACCAAGGGGGCCCAGCCTTCTCCCTGCACAGCTCACCCCCGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGTGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 90 bp GATGGAGATGACGCATGCTGCTGGGTGAAGAGCAGTCACTGGGCCTaGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTGGACGGA +
Preference number: 1 (lower is better)
Translates to: DGDDACCWVKSSHWA*HRGSKPGSPQPLDG
Trigger: TCCGTCCAGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCTTCACCCAGCAGCATGCGTCATCTCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
3UTR CCA 90 bp GGCACAGATGGAGATGACGCATGCTGCTGGGTGAAGAGCAGTCACTaGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTG +
Preference number: 1 (lower is better)
Translates to: GTDGDDACCWVKSSH*AWHRGSKPGSPQPL
Trigger: CAGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCTTCACCCAGCAGCATGCGTCATCTCCATCTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
3UTR TCA 90 bp CAGGGATGGGTGAGTCTCTTGGGAGAGGCAGGGCACAGATGGAGATaGCGCATGCTGCTGGGTGAAGAGCAGTCACTGGGCCTGGCACCG +
Preference number: 1 (lower is better)
Translates to: QGWVSLLGEAGHRWR*RMLLGEEQSLGLAP
Trigger: CGGTGCCAGGCCCAGTGACTGCTCTTCACCCAGCAGCATGCGTCATCTCCATCTGTGCCCTGCCTCTCCCAAGAGACTCACCCATCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586926.1
3UTR TCA 90 bp ATAATGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATaGGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGTATT +
Preference number: 1 (lower is better)
Translates to: IMGLPPGEILLQCRQ*ESVVWGWDAAGGRI
Trigger: AATACGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCATTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR TCA 90 bp TCTCAGGTGAGGAGGGCCCGTTCCCTGCCTCACCTGAGGGGGACCTaGGAAGGCAGTCTTCCCTCTGCTGTTTCTAAGACTGCGGTGTTC +
Preference number: 1 (lower is better)
Translates to: SQVRRARSLPHLRGT*EGSLPSAVSKTAVF
Trigger: GAACACCGCAGTCTTAGAAACAGCAGAGGGAAGACTGCCTTCTCAGGTCCCCCTCAGGTGAGGCAGGGAACGGGCCCTCCTCACCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 90 bp CAGACATTTTCCACTCAGGCACACTTGGGCCTTACTTGTCTCTCCTaGTGGAGCCTGGGCTGGTCGGGGGTGAGCTGTGCAGGGAGAAGG +
Preference number: 1 (lower is better)
Translates to: QTFSTQAHLGLTCLS*WSLGWSGVSCAGRR
Trigger: CCTTCTCCCTGCACAGCTCACCCCCGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGAAAATGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 90 bp ACATTTTCCACTCAGGCACACTTGGGCCTTACTTGTCTCTCCTGCTaGAGCCTGGGCTGGTCGGGGGTGAGCTGTGCAGGGAGAAGGCTG +
Preference number: 1 (lower is better)
Translates to: TFSTQAHLGLTCLSC*SLGWSGVSCAGRRL
Trigger: CAGCCTTCTCCCTGCACAGCTCACCCCCGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGAAAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 90 bp TCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTaGTTTGGGGGTGGGATGCTGCGGGAGGCCGTATTCAATGACAAC +
Preference number: 1 (lower is better)
Translates to: SHPERFCCSVGNESR*FGGGMLREAVFNDN
Trigger: GTTGTCATTGAATACGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR GCA 90 bp AGTCTTGGGCTAAGGCCAATGGGAAGGGACCATCTCTCGTCAGCCTaGAGCTTCATAAAGGGAGAATCAGAGACGGCCGTGGCTCAGGGC +
Preference number: 1 (lower is better)
Translates to: SLGLRPMGRDHLSSA*SFIKGESETAVAQG
Trigger: GCCCTGAGCCACGGCCGTCTCTGATTCTCCCTTTATGAAGCTGCAGGCTGACGAGAGATGGTCCCTTCCCATTGGCCTTAGCCCAAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 90 bp GTTTTGACAGGTCAGTGTCCCAGACATTTTCCACTCAGGCACACTTaGGCCTTACTTGTCTCTCCTGCTGGAGCCTGGGCTGGTCGGGGG +
Preference number: 1 (lower is better)
Translates to: VLTGQCPRHFPLRHT*ALLVSPAGAWAGRG
Trigger: CCCCCGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGAAAATGTCTGGGACACTGACCTGTCAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR TCA 90 bp GAGCATCAAGGGGCAGGAAGACACCTTTCCCTCCTTGTTCCTCGCTaGCCGATGACCCTGGAACTCCACGGTGCCTCTCTGAATCTCTGT +
Preference number: 1 (lower is better)
Translates to: EHQGAGRHLSLLVPR*PMTLELHGASLNLC
Trigger: ACAGAGATTCAGAGAGGCACCGTGGAGTTCCAGGGTCATCGGTCAGCGAGGAACAAGGAGGGAAAGGTGTCTTCCTGCCCCTTGATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR TCA 90 bp CATACACTGCCCCTTGCCAAACACCCTTCCGGGAACCAATCAGCATaGCATTCCTGGGCAGTTAATGTGAGAAGCGAGGGCAGGGCACCG +
Preference number: 1 (lower is better)
Translates to: HTLPLAKHPSGNQSA*HSWAVNVRSEGRAP
Trigger: CGGTGCCCTGCCCTCGCTTCTCACATTAACTGCCCAGGAATGTCATGCTGATTGGTTCCCGGAAGGGTGTTTGGCAAGGGGCAGTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 90 bp AAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCAAGTCTTaGGCTAAGGCCAATGGGAAGGGACCATCTCTCGTCAGCCTGCAG +
Preference number: 1 (lower is better)
Translates to: KGFLVTLSLGVDSKS*AKANGKGPSLVSLQ
Trigger: CTGCAGGCTGACGAGAGATGGTCCCTTCCCATTGGCCTTAGCCCAAGACTTGGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 90 bp GCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTaGGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAAC +
Preference number: 1 (lower is better)
Translates to: AAVSAMRVGGLGVGC*GRPYSMTTEATQPN
Trigger: GTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR GCA 90 bp TCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATaGTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCA +
Preference number: 1 (lower is better)
Translates to: SAAVSAMRVGGLGVG*CGRPYSMTTEATQP
Trigger: TGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR TCA 90 bp ACCCTTCCGGGAACCAATCAGCATGACATTCCTGGGCAGTTAATGTaGGAAGCGAGGGCAGGGCACCGTCCAGGTGGACTTTATCCTTCA +
Preference number: 1 (lower is better)
Translates to: TLPGTNQHDIPGQLM*EARAGHRPGGLYPS
Trigger: TGAAGGATAAAGTCCACCTGGACGGTGCCCTGCCCTCGCTTCTCACATTAACTGCCCAGGAATGTCATGCTGATTGGTTCCCGGAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 90 bp ACACAAATTTCTCTCCTTCTACACGTAGCTCCATACACTGCCCCTTaGCAAACACCCTTCCGGGAACCAATCAGCATGACATTCCTGGGC +
Preference number: 1 (lower is better)
Translates to: TQISLLLHVAPYTAP*QTPFREPISMTFLG
Trigger: GCCCAGGAATGTCATGCTGATTGGTTCCCGGAAGGGTGTTTGGCAAGGGGCAGTGTATGGAGCTACGTGTAGAAGGAGAGAAATTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 90 bp AAGCCCATGGAGACGACCTGGACACATGTATTTCTAGGGAACAGATaGTTAGTTGAGCATCAAGGGGCAGGAAGACACCTTTCCCTCCTT +
Preference number: 1 (lower is better)
Translates to: KPMETTWTHVFLGNR*LVEHQGAGRHLSLL
Trigger: AAGGAGGGAAAGGTGTCTTCCTGCCCCTTGATGCTCAACTAAGCATCTGTTCCCTAGAAATACATGTGTCCAGGTCGTCTCCATGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 90 bp AAGCCACACACAAATTTCTCTCCTTCTACACGTAGCTCCATACACTaGCCCTTGCCAAACACCCTTCCGGGAACCAATCAGCATGACATT +
Preference number: 1 (lower is better)
Translates to: KPHTNFSPSTRSSIH*PLPNTLPGTNQHDI
Trigger: AATGTCATGCTGATTGGTTCCCGGAAGGGTGTTTGGCAAGGGGCAGTGTATGGAGCTACGTGTAGAAGGAGAGAAATTTGTGTGTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR TCA 90 bp TTTTTACAGCTCAGAGAAGTAACAGCAGGTGGTTGCAACAGCTTGTaGTGTTGGTACATTGTCGATAGAATGTGGATGATTAACGTGTAT +
Preference number: 1 (lower is better)
Translates to: FLQLREVTAGGCNSL*CWYIVDRMWMINVY
Trigger: ATACACGTTAATCATCCACATTCTATCGACAATGTACCAACATCACAAGCTGTTGCAACCACCTGCTGTTACTTCTCTGAGCTGTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp TGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCACCATGGCATGGGGCTaGCAGTCAGGCAGTCCGGGG +
Preference number: 2 (lower is better)
Translates to: CSVGNESRWFGGGMLREATMAWG*QSGSPG
Trigger: CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT...GGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTACCATGGCATGGGGCTaGCAGTCAGGCAGTCCGGGG +
Preference number: 2 (lower is better)
Translates to: HPERFCCSVGNESRWFGGTMAWG*QSGSPG
Trigger: CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR CAA 90 bp GTCAGTGTCCCAGACATTTTCCACTCAGGCACACTTGGGCCTTACTaGTCTCTCCTGCTGGAGCCTGGGCTGGTCGGGGGTGAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: VSVPDIFHSGTLGPY*SLLLEPGLVGGELC
Trigger: GCACAGCTCACCCCCGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGAAAATGTCTGGGACACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR TCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGCTACACAACCAAACCTaGGGGGACAGAGGTAGCCAG +
Preference number: 2 (lower is better)
Translates to: WGSHPERFCCSVGNESRWLHNQT*GDRGSQ
Trigger: CTGGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAG...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGCCTCCTACCATGGCATaGGGCTGGCAGTCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEPPTMA*GWQSGS
Trigger: ACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCCTCCTACCATGGCATaGGGCTGGCAGTCAGGCAGT +
Preference number: 2 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMPPTMA*GWQSGS
Trigger: ACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp GGTGGGATGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAAACCATGGCATGGGGCTaGCAGTCAGGCAGTCCGGGG +
Preference number: 2 (lower is better)
Translates to: GGMLREAVFNDNRSYTTKTMAWG*QSGSPG
Trigger: CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT...TTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCATCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR CAA 90 bp AGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCAGAGGCTaGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACT +
Preference number: 2 (lower is better)
Translates to: RSYTTKPEGTEVARG*VVDTERDRRQRDGT
Trigger: AGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR CAA 90 bp ACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTaGGGGGTGGGATGCTGCGGGAGGCCGTATTCAATGACAACAGAA +
Preference number: 2 (lower is better)
Translates to: TRRDSAAVSAMRVGG*GVGCCGRPYSMTTE
Trigger: TTCTGTTGTCATTGAATACGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR CAA 90 bp AGTTTTGACAGGTCAGTGTCCCAGACATTTTCCACTCAGGCACACTaGGGCCTTACTTGTCTCTCCTGCTGGAGCCTGGGCTGGTCGGGG +
Preference number: 2 (lower is better)
Translates to: SFDRSVSQTFSTQAH*GLTCLSCWSLGWSG
Trigger: CCCCGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGAAAATGTCTGGGACACTGACCTGTCAAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR TCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTGGAGGCCGTATTCAATaGCAACAGAAGCTACACAAC +
Preference number: 2 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGGGRIQ*QQKLHN
Trigger: GTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCC...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCAATCAGAGACGGCCGTaGCTCAGGGCACTGCACGAA +
Preference number: 2 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSNQRRP*LRALHE
Trigger: TTCGTGCAGTGCCCTGAGCCACGGCCGTCTCTGATT...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CAA 90 bp CACACAAATTTCTCTCCTTCTACACGTAGCTCCATACACTGCCCCTaGCCAAACACCCTTCCGGGAACCAATCAGCATGACATTCCTGGG +
Preference number: 2 (lower is better)
Translates to: HTNFSPSTRSSIHCP*PNTLPGTNQHDIPG
Trigger: CCCAGGAATGTCATGCTGATTGGTTCCCGGAAGGGTGTTTGGCAAGGGGCAGTGTATGGAGCTACGTGTAGAAGGAGAGAAATTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR GCA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCCATCTCTCGTCAGCCTaGAGCTTCATAAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSHLSSA*SFIKGE
Trigger: TTCTCCCTTTATGAAGCTGCAGGCTGACGAGAGATG...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR GCA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTACCGGGAGGCGGAGGTTaGAGTGAGCCAAGATCATGC +
Preference number: 2 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLPGGGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAACCTCCGCCTCCCGG...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR GCA 90 bp CAATACAAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGCGTGGCTCAGGGCACTaGACGAACGCTCTTGCAGTC +
Preference number: 2 (lower is better)
Translates to: QYKHISCTGIDSHGEGTKRGSGH*TNALAV
Trigger: GACTGCAAGAGCGTTCGTGCAGTGCCCTGAGCCACG...CTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTTGTATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp GCATCTGTACAGTATGTAAATGCTATTAATGTCGTCACTCACATGCACGACAGTATGGTCTTGATCTCCTaGCCTCGTGATCCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: ASVQYVNAINVVTHMHDSMVLIS*PRDPPA
Trigger: GGCAGGCGGATCACGAGGCCAGGAGATCAAGACCAT...ACTGTCGTGCATGTGAGTGACGACATTAATAGCATTTACATACTGTACAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR TCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCAGCCTCTCGAGTAGCTaGGATTACAGGTGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSSLSSS*DYRCPP
Trigger: TGGCGGGCACCTGTAATCTCAGCTACTCGAGAGGCT...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR GCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCTTGGGGGTGGGATGCTaGGGGAGGCCGTATTCAATG +
Preference number: 2 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSLGVGC*GRPYSM
Trigger: CATTGAATACGGCCTCCCGCAGCATCCCACCCCCAA...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR GCA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTACACCCGGAGAGATTCTaGTGCAGTGTCGGCAATGAG +
Preference number: 2 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLHPERF*CSVGNE
Trigger: CTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp CAATACAAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGGGCAATGAGAGTCGGTaGTTTGGGGGTGGGATGCTG +
Preference number: 2 (lower is better)
Translates to: QYKHISCTGIDSHGEGTKGNESR*FGGGML
Trigger: CAGCATCCCACCCCCAAACCACCGACTCTCATTGCC...CTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTTGTATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCAATCAGAGACGGCCGTaGCTCAGGGCACTGCACGAA +
Preference number: 2 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSNQRRP*LRALHE
Trigger: TTCGTGCAGTGCCCTGAGCCACGGCCGTCTCTGATT...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp CAATACAAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGGGTCACTCTGTCGCTTaGGGTCGACTCCAAGTCTTG +
Preference number: 2 (lower is better)
Translates to: QYKHISCTGIDSHGEGTKGHSVA*GRLQVL
Trigger: CAAGACTTGGAGTCGACCCCAAGCGACAGAGTGACC...CTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTTGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR TCA 90 bp ATTCAAATGCCTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTCCAAGTTCTCCTCGATaGATCAATAAAGGGAGAATG +
Preference number: 2 (lower is better)
Translates to: IQMPEASSDSECDCKRVSPSSPR*INKGRM
Trigger: CATTCTCCCTTTATTGATTCATCGAGGAGAACTTGG...AGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAGGCATTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR TCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCGGAGGCCGTATTCAATaGCAACAGAAGCTACACAAC +
Preference number: 2 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSGGRIQ*QQKLHN
Trigger: GTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCC...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR TCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCCCCACTTGGGGAACTTaGAGAAGTGTTTCATTAGCA +
Preference number: 2 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSPTWGT*RSVSLA
Trigger: TGCTAATGAAACACTTCTTCAAGTTCCCCAAGTGGG...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CCA 90 bp GCATCTGTACAGTATGTAAATGCTATTAATGTCGTCACTCACATGCACGACAGTAAGTGGAATGGGATATaGCTTTTGGTACCTGAAAAT +
Preference number: 2 (lower is better)
Translates to: ASVQYVNAINVVTHMHDSKWNGI*LLVPEN
Trigger: ATTTTCAGGTACCAAAAGCCATATCCCATTCCACTT...ACTGTCGTGCATGTGAGTGACGACATTAATAGCATTTACATACTGTACAGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 72 bp GAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTaGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCA +
Preference number: 3 (lower is better)
Translates to: ELETLPPTMAWG*QSGSPGRRSVA
Trigger: TGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR CCA 72 bp GAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATaGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCC +
Preference number: 3 (lower is better)
Translates to: EMELETLPPTMA*GWQSGSPGRRS
Trigger: GGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR CCA 72 bp TTGGGCCTTACTTGTCTCTCCTGCTGGAGCCTGGGCTaGTCGGGGGTGAGCTGTGCAGGGAGAAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: LGLTCLSCWSLG*SGVSCAGRRLG
Trigger: GCCCAGCCTTCTCCCTGCACAGCTCACCCCCGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 72 bp GGAGATGACGCATGCTGCTGGGTGAAGAGCAGTCACTaGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCT +
Preference number: 3 (lower is better)
Translates to: GDDACCWVKSSH*AWHRGSKPGSP
Trigger: AGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCTTCACCCAGCAGCATGCGTCATCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586926.1
3UTR TCA 72 bp CTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATaGGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGA +
Preference number: 3 (lower is better)
Translates to: LPPGEILLQCRQ*ESVVWGWDAAG
Trigger: TCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CAA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGAGGTAGCCAGAGGCTaGGTGGTCGACACAGAACGG +
Preference number: 3 (lower is better)
Translates to: HPERFCCSVGNESRWFGGEVARG*VVDTER
Trigger: CCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTC...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR TCA 72 bp AGGAGGGCCCGTTCCCTGCCTCACCTGAGGGGGACCTaGGAAGGCAGTCTTCCCTCTGCTGTTTCTAAGACT +
Preference number: 3 (lower is better)
Translates to: RRARSLPHLRGT*EGSLPSAVSKT
Trigger: AGTCTTAGAAACAGCAGAGGGAAGACTGCCTTCTCAGGTCCCCCTCAGGTGAGGCAGGGAACGGGCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 72 bp CTGGTCACTCTGTCGCTTGGGGTCGACTCCAAGTCTTaGGCTAAGGCCAATGGGAAGGGACCATCTCTCGTC +
Preference number: 3 (lower is better)
Translates to: LVTLSLGVDSKS*AKANGKGPSLV
Trigger: GACGAGAGATGGTCCCTTCCCATTGGCCTTAGCCCAAGACTTGGAGTCGACCCCAAGCGACAGAGTGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 72 bp GTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATaGTGCGGGAGGCCGTATTCAATGACAACAGAAGCT +
Preference number: 3 (lower is better)
Translates to: VSAMRVGGLGVG*CGRPYSMTTEA
Trigger: AGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR GCA 72 bp AAAGGGAGAATCAGAGACGGCCGTGGCTCAGGGCACTaGACGAACGCTCTTGCAGTCACGGTTGATAACGTG +
Preference number: 3 (lower is better)
Translates to: KGRIRDGRGSGH*TNALAVTVDNV
Trigger: CACGTTATCAACCGTGACTGCAAGAGCGTTCGTGCAGTGCCCTGAGCCACGGCCGTCTCTGATTCTCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 72 bp GGTCAGTGTCCCAGACATTTTCCACTCAGGCACACTTaGGCCTTACTTGTCTCTCCTGCTGGAGCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: GQCPRHFPLRHT*ALLVSPAGAWA
Trigger: AGCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGAAAATGTCTGGGACACTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CAA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCGAGGTAGCCAGAGGCTaGGTGGTCGACACAGAACGG +
Preference number: 3 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSEVARG*VVDTER
Trigger: CCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTC...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR TCA 72 bp GGAACCAATCAGCATGACATTCCTGGGCAGTTAATGTaGGAAGCGAGGGCAGGGCACCGTCCAGGTGGACTT +
Preference number: 3 (lower is better)
Translates to: GTNQHDIPGQLM*EARAGHRPGGL
Trigger: AAGTCCACCTGGACGGTGCCCTGCCCTCGCTTCTCACATTAACTGCCCAGGAATGTCATGCTGATTGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR TCA 72 bp CCCCTTGCCAAACACCCTTCCGGGAACCAATCAGCATaGCATTCCTGGGCAGTTAATGTGAGAAGCGAGGGC +
Preference number: 3 (lower is better)
Translates to: PLAKHPSGNQSA*HSWAVNVRSEG
Trigger: GCCCTCGCTTCTCACATTAACTGCCCAGGAATGTCATGCTGATTGGTTCCCGGAAGGGTGTTTGGCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 72 bp TCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTaGGGGAGGCCGTATTCAATGACAACAGAAGCTACA +
Preference number: 3 (lower is better)
Translates to: SAMRVGGLGVGC*GRPYSMTTEAT
Trigger: TGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR GCA 72 bp CTAAGGCCAATGGGAAGGGACCATCTCTCGTCAGCCTaGAGCTTCATAAAGGGAGAATCAGAGACGGCCGTG +
Preference number: 3 (lower is better)
Translates to: LRPMGRDHLSSA*SFIKGESETAV
Trigger: CACGGCCGTCTCTGATTCTCCCTTTATGAAGCTGCAGGCTGACGAGAGATGGTCCCTTCCCATTGGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 72 bp ACATGCACGACAGTCCTTGTTCCCCCAGGAAGGGCCTaGTGGCCCCAGCACACACTTGGGATTATGTGTATA +
Preference number: 3 (lower is better)
Translates to: TCTTVLVPPGRA*WPQHTLGIMCI
Trigger: TATACACATAATCCCAAGTGTGTGCTGGGGCCACCAGGCCCTTCCTGGGGGAACAAGGACTGTCGTGCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 72 bp TGTTCCTCGCTGACCGATGACCCTGGAACTCCACGGTaGCTCTCTGAATCTCTGTTATGGATCCCCCACTAT +
Preference number: 3 (lower is better)
Translates to: CSSLTDDPGTPR*LSESLLWIPHY
Trigger: ATAGTGGGGGATCCATAACAGAGATTCAGAGAGGCACCGTGGAGTTCCAGGGTCATCGGTCAGCGAGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 72 bp TCTCTCCTTCTACACGTAGCTCCATACACTGCCCCTTaGCAAACACCCTTCCGGGAACCAATCAGCATGACA +
Preference number: 3 (lower is better)
Translates to: SLLLHVAPYTAP*QTPFREPISMT
Trigger: TGTCATGCTGATTGGTTCCCGGAAGGGTGTTTGGCAAGGGGCAGTGTATGGAGCTACGTGTAGAAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 72 bp CTGTTTCTAAGACTGCGGTGTTCAACGTGTGCCTGGTaGTCTCAGCATAACTTTCCCTTCTCCTTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: LFLRLRCSTCAW*SQHNFPFSFPG
Trigger: CCCTGGAAAGGAGAAGGGAAAGTTATGCTGAGAGCACCAGGCACACGTTGAACACCGCAGTCTTAGAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 72 bp ACAAATTTCTCTCCTTCTACACGTAGCTCCATACACTaGCCCTTGCCAAACACCCTTCCGGGAACCAATCAG +
Preference number: 3 (lower is better)
Translates to: TNFSPSTRSSIH*PLPNTLPGTNQ
Trigger: CTGATTGGTTCCCGGAAGGGTGTTTGGCAAGGGGCAGTGTATGGAGCTACGTGTAGAAGGAGAGAAATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CCA 72 bp CTGCTGTTTCTAAGACTGCGGTGTTCAACGTGTGCCTaGTGCTCTCAGCATAACTTTCCCTTCTCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: LLFLRLRCSTCA*CSQHNFPFSFP
Trigger: TGGAAAGGAGAAGGGAAAGTTATGCTGAGAGCACCAGGCACACGTTGAACACCGCAGTCTTAGAAACAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR-3UTR CAA 90 bp AAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGATCTACATGAGAGTCGGTGGTTaGGGGGTGGGATGCTGCGGG +
Preference number: 3 (lower is better)
Translates to: KHISCTGIDSHGEGTKIYMRVGG*GVGCCG
Trigger: CCCGCAGCATCCCACCCCCAAACCACCGACTCTCAT...GTAGATCTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR GCA 72 bp GAGACGACCTGGACACATGTATTTCTAGGGAACAGATaGTTAGTTGAGCATCAAGGGGCAGGAAGACACCTT +
Preference number: 3 (lower is better)
Translates to: ETTWTHVFLGNR*LVEHQGAGRHL
Trigger: AAGGTGTCTTCCTGCCCCTTGATGCTCAACTAAGCATCTGTTCCCTAGAAATACATGTGTCCAGGTCGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR TCA 72 bp CTCAGAGAAGTAACAGCAGGTGGTTGCAACAGCTTGTaGTGTTGGTACATTGTCGATAGAATGTGGATGATT +
Preference number: 3 (lower is better)
Translates to: LREVTAGGCNSL*CWYIVDRMWMI
Trigger: AATCATCCACATTCTATCGACAATGTACCAACATCACAAGCTGTTGCAACCACCTGCTGTTACTTCTCTGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCTCTGGTCGCGCAGCATaGGGTCGATGCCCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSSGRAA*GRCPGS
Trigger: TGAGCCGGGGCATCGACCGCATGCTGCGCGACCAGA...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CCA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCCGCTCCGTCGCAGGGTaGCGGCAGCATCCTCACAAG +
Preference number: 4 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSRSVAG*RQHPHK
Trigger: CTTGTGAGGATGCTGCCGCCACCCTGCGACGGAGCG...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCACCATGGCATGGGGCTaGCAGTCAGGCAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSTMAWG*QSGSPG
Trigger: CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGGGCAGGAGAATCCCTTaGGCCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AWGWQSGSPGRRSVAGWRGRRIP*AREAEV
Trigger: AACCTCCGCCTCCCGGGCTCAAGGGATTCTCCTGCC...CCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp ACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGACGCGTCCCTGCTCCTaGCGGGCGAAGACTCGCGGA +
Preference number: 4 (lower is better)
Translates to: TMAWGWQSGSPGRRSVAGTRPCS*RAKTRG
Trigger: TCCGCGAGTCTTCGCCCGCCAGGAGCAGGGACGCGT...CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS-3UTR TCA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCTGTCGCGGCAGTCGTTaGACACCCTGCGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSCRGSR*TPCGCS
Trigger: AGAACATCCGCAGGGTGTTCAACGACTGCCGCGACA...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCTTGAGGTGCATCCGCTaGATGATGTCGCGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSLRCIR*MMSRQS
Trigger: CGACTGCCGCGACATCATCCAGCGGATGCACCTCAA...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCGGCGGCCGCCTTGGCTaGAGATCACTTGCTAACGCC +
Preference number: 4 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSIGGRLG*RSLANA
Trigger: GGCGTTAGCAAGTGATCTCCAGCCAAGGCGGCCGCC...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR GCA 90 bp CCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCTCCTCGGCACTCAGCTaGTCGGTGCGCTGCCGCTTC +
Preference number: 4 (lower is better)
Translates to: PPTMAWGWQSGSPGRRSVSSALS*SVRCRF
Trigger: GAAGCGGCAGCGCACCGAGCAGCTGAGTGCCGAGGA...GACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR GCA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCCGTGGCTCAGGGCACTaGACGAACGCTCTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSIRGSGH*TNALAV
Trigger: GACTGCAAGAGCGTTCGTGCAGTGCCCTGAGCCACG...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCGGAGGTCCTGGTCTGTaGGTGTGTAGTCAACCAAGC +
Preference number: 4 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSGGPGL*VCSQPS
Trigger: GCTTGGTTGACTACACACCCACAGACCAGGACCTCC...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTCCGCGGCTGGGCAGGTaGCCTTGGCTGTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: EQSLGLAPRQQARVPSAPPRLGR*PWLSAS
Trigger: ACTGGCTGACAGCCAAGGCCACCTGCCCAGCCGCGG...AGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR TCA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTCTGCAGTGTCGGCAATaGGAGTCGGTGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGLQCRQ*ESVVWG
Trigger: CCCCCAAACCACCGACTCTCATTGCCGACACTGCAG...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp ACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTTCCTCGCTGACCGATaGCCCTGGAACTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: TMAWGWQSGSPGRRSVAGFLADR*PWNSTV
Trigger: CACCGTGGAGTTCCAGGGTCATCGGTCAGCGAGGAA...CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp ACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGCCGTCGTCTTGCTGTTaGCGCCCAAACACCCCATGC +
Preference number: 4 (lower is better)
Translates to: TMAWGWQSGSPGRRSVAGPSSCC*RPNTPC
Trigger: GCATGGGGTGTTTGGGCGGCAACAGCAAGACGACGG...CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGTTTGGGGGTGGGATaGTGCGGGAGGCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGGLGVG*CGRPYS
Trigger: TGAATACGGCCTCCCGCAGCATCCCACCCCCAAACC...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCACGACCTCGGCTCACTaGAATCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSITTSAH*NLHLPG
Trigger: ACCTGGGAGGTGGAGATTGCAGTGAGCCGAGGTCGT...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp TGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCTGCGCCGCGGCCGCCTaGCTCTCTTGCACCCCGAGC +
Preference number: 4 (lower is better)
Translates to: CSVGNESRWFGGGMLREACAAAA*LSCTPS
Trigger: GCTCGGGGTGCAAGAGAGCCAGGCGGCCGCGGCGCA...GGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS-3UTR TCA 90 bp ACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGTCCACGGCGCAGGTaGAGTGCGGGTAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: TMAWGWQSGSPGRRSVAGCPRRR*SAGSSN
Trigger: ATTACTGCTACCCGCACTTCACCTGCGCCGTGGACA...CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTCTCCTTGTTCCTCGCTaGCCGATGACCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGLLVPR*PMTLEL
Trigger: GAGTTCCAGGGTCATCGGTCAGCGAGGAACAAGGAG...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTCTGGGCAGGTGGCCTTaGCTGTCAGCCAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EQSLGLAPRQQARVPSAPLGRWP*LSASGG
Trigger: ACCACCACTGGCTGACAGCCAAGGCCACCTGCCCAG...AGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CCA 90 bp AGAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCGTGAAGAGCAGTCACTaGGCCTGGCACCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RAVTGPGTEAASQGPLSPVKSSH*AWHRGS
Trigger: GCTGCCTCGGTGCCAGGCCCAGTGACTGCTCTTCAC...GGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR TCA 90 bp CCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCTGTCGCGGCAGTCGTTaGACACCCTGCGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PPTMAWGWQSGSPGRRSVCRGSR*TPCGCS
Trigger: AGAACATCCGCAGGGTGTTCAACGACTGCCGCGACA...GACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp AGAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCACGCATGCTGCTGGGTaGAGAGCAGTCACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RAVTGPGTEAASQGPLSPTHAAG*RAVTGP
Trigger: AGGCCCAGTGACTGCTCTTCACCCAGCAGCATGCGT...GGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR GCA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTTCAGCCATGGGCTCCTaGATCCAGCTCATGATGCTG +
Preference number: 4 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGSAMGS*IQLMML
Trigger: CAGCATCATGAGCTGGATGCAGGAGCCCATGGCTGA...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGCGCTCCGTCGCAGGGTaGCGGCAGCATCCTCACAAG +
Preference number: 4 (lower is better)
Translates to: AVSAMRVGGLGVGCCGRPRSVAG*RQHPHK
Trigger: CTTGTGAGGATGCTGCCGCCACCCTGCGACGGAGCG...CGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCCTACACAACCAAACCTaGGGGGACAGAGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPTMAWGWQSGSPGRRSVLHNQT*GDRGSQ
Trigger: CTGGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAG...GACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGAGCCTCTCGAGTAGCTaGGATTACAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: DSASYHGMGLAVRQSGAPSLSSS*DYRCPP
Trigger: TGGCGGGCACCTGTAATCTCAGCTACTCGAGAGGCT...CGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTGGGCTGGTCGGGGGTaGGCTGTGCAGGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGWAGRG*AVQGEG
Trigger: GCCTTCTCCCTGCACAGCTCACCCCCGACCAGCCCA...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTGGGCACAGATGGAGATaGCGCATGCTGCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: EQSLGLAPRQQARVPSAPGHRWR*RMLLGE
Trigger: TTCACCCAGCAGCATGCGTCATCTCCATCTGTGCCC...AGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR GCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTGCTCGGACGCGTCCCTaGTCCTGGCGGGCGAAGACT +
Preference number: 4 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGARTRP*SWRAKT
Trigger: AGTCTTCGCCCGCCAGGAGCAGGGACGCGTCCGAGC...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS-3UTR GCA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCTCCTGCATCTGGTGTTaGGTCTTCAGGAACAGTATA +
Preference number: 4 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSSCIWC*VFRNSI
Trigger: TATACTGTTCCTGAAGACGCAACACCAGATGCAGGA...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCTCATACTGCTTGAGGTaGATCCGCTGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSISYCLR*IRWMMS
Trigger: CGACATCATCCAGCGGATGCACCTCAAGCAGTATGA...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGACCCTGTTCGGCGCTaGCGGCCGCCAGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GSHPERFCCSVGNESRWFDPVRR*RPPAAG
Trigger: TCCCGCAGCTGGCGGCCGGCAGCGCCGAACAGGGTC...AAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR GCA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCTCAACGTGTGCCTGGTaGTCTCAGCATAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSISTCAW*SQHNFP
Trigger: GGGAAAGTTATGCTGAGAGCACCAGGCACACGTTGA...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCCCATACACTGCCCCTTaGCAAACACCCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: PPTMAWGWQSGSPGRRSVPYTAP*QTPFRE
Trigger: TTCCCGGAAGGGTGTTTGGCAAGGGGCAGTGTATGG...GACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp AGAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCGTCAGCCAGTGGTGGTaGTTCTCCTTGGTGCTCCGT +
Preference number: 4 (lower is better)
Translates to: RAVTGPGTEAASQGPLSPVSQWW*FSLVLR
Trigger: ACGGAGCACCAAGGAGAAGCACCACCACTGGCTGAC...GGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR GCA 90 bp AGAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCCAGGCTTCCAGCAGGTaGTGCAGATGCTCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RAVTGPGTEAASQGPLSPQASSR*CRCSGM
Trigger: CATCCCTGAGCATCTGCAGCACCTGCTGGAAGCCTG...GGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CCA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACGCGCGCGCCCCGTGTTaGCTCGGACGCGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KPEGTEVARGLVVDTERDARAPC*LGRVPA
Trigger: AGCAGGGACGCGTCCGAGCCAACACGGGGCGCGCGC...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS-3UTR CCA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTTTTTCATCGACGCCCTaGTCTTCCGTCGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGFSSTP*SSVVLL
Trigger: CAGCAAGACGACGGAAGACCAGGGCGTCGATGAAAA...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CCA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCGTTGGCCAGCGGAACTaGAGGTATTATAGTACTCAT +
Preference number: 4 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSVGQRN*RYYSTH
Trigger: ATGAGTACTATAATACCTCCAGTTCCGCTGGCCAAC...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTGGAGGTCCTGGTCTGTaGGTGTGTAGTCAACCAAGC +
Preference number: 4 (lower is better)
Translates to: ASYHGMGLAVRQSGAPLRGGPGL*VCSQPS
Trigger: GCTTGGTTGACTACACACCCACAGACCAGGACCTCC...ACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCTGAAAGAGATGGTCTaGTCTCTTCGGTGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: AWGWQSGSPGRRSVAGWRLKEMV*SLRCFP
Trigger: CGGAAAACACCGAAGAGACCAGACCATCTCTTTCAG...CCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS-3UTR TCA 90 bp GCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGGTTTGCTTACTTGTATaGCGTAGCCTGTGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: AWGWQSGSPGRRSVAGWRVCLLV*RSLCPK
Trigger: CTTTGGACACAGGCTACGTCATACAAGTAAGCAAAC...CCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGCACCTGAGGGGGACCTaGGAAGGCAGTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AVSAMRVGGLGVGCCGRPHLRGT*EGSLPS
Trigger: AGAGGGAAGACTGCCTTCTCAGGTCCCCCTCAGGTG...CGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp ACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGGAACAGATGCTTAGTTaGGCATCAAGGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TMAWGWQSGSPGRRSVAGEQMLS*ASRGRK
Trigger: CTTCCTGCCCCTTGATGCTCAACTAAGCATCTGTTC...CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTGGAGATGACGCATGCTaGTGGGTGAAGAGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: EQSLGLAPRQQARVPSAPGDDAC*WVKSSH
Trigger: GTGACTGCTCTTCACCCAGCAGCATGCGTCATCTCC...AGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR GCA 90 bp GAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTAGCAGGTGCTGCAGATaGTCAGGGATGGGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: EQSLGLAPRQQARVPSAPSRCCR*SGMGES
Trigger: AGACTCACCCATCCCTGAGCATCTGCAGCACCTGCT...AGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CCA 90 bp GGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTCCGGGAAAGTGCGTCTaGGCGCGCGCCCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GSHPERFCCSVGNESRWFPGKCV*ARAPCW
Trigger: CCAACACGGGGCGCGCGCCCAGACGCACTTTCCCGG...AAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS-3UTR CCA 90 bp GAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTGGTGGTGCTTCTCCTTaGTGCTCCGTCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EQSLGLAPRQQARVPSAPGGASP*CSVFRN
Trigger: GTTCCTGAAGACGGAGCACCAAGGAGAAGCACCACC...AGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CCA 90 bp GAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTTTGGCTGTCAGCCAGTaGTGGTGCTTCTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EQSLGLAPRQQARVPSAPLAVSQ*WCFSLV
Trigger: CACCAAGGAGAAGCACCACCACTGGCTGACAGCCAA...AGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CCA 90 bp AGAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCGATGACGCATGCTGCTaGGTGAAGAGCAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: RAVTGPGTEAASQGPLSPDDACC*VKSSHW
Trigger: CCAGTGACTGCTCTTCACCCAGCAGCATGCGTCATC...GGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CCA 90 bp AGAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCGCAGATGCTCAGGGATaGGTGAGTCTCTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RAVTGPGTEAASQGPLSPADAQG*VSLLGE
Trigger: CTCTCCCAAGAGACTCACCCATCCCTGAGCATCTGC...GGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR TCA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCCCCACTTGGGGAACTTaGAGAAGTGTTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSIPTWGT*RSVSLA
Trigger: TGCTAATGAAACACTTCTTCAAGTTCCCCAAGTGGG...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGGGCAGGAGAATCCCTTaGGCCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSEMELETLPPTMAWGWQGRRIP*AREAEV
Trigger: AACCTCCGCCTCCCGGGCTCAAGGGATTCTCCTGCC...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGGCCTGGCCAACATGGTaGAACCTCGTCTCCGCTAGA +
Preference number: 4 (lower is better)
Translates to: AVSAMRVGGLGVGCCGRPAWPTW*NLVSAR
Trigger: TCTAGCGGAGACGAGGTTTCACCATGTTGGCCAGGC...CGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCACCTGAGGGGGACCTaGGAAGGCAGTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AAVSAMRVGGLGVGCCGRHLRGT*EGSLPS
Trigger: AGAGGGAAGACTGCCTTCTCAGGTCCCCCTCAGGTG...CCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGCCCCTTGGTCTCAGGTaGGGAGGGCCCGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEPLGLR*GGPVPC
Trigger: GCAGGGAACGGGCCCTCCTCACCTGAGACCAAGGGG...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTATCCCCCACTATATTTaGTGGGAACCCAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ASYHGMGLAVRQSGAPLRIPHYI*WEPSEP
Trigger: TGGCTCACTGGGTTCCCATCAAATATAGTGGGGGAT...ACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTAGAGTTGGAGACGTGTaGGGCTCCTGCGACGGCTCC +
Preference number: 4 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGRVGDV*GSCDGS
Trigger: GGAGCCGTCGCAGGAGCCGCACACGTCTCCAACTCT...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp CTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCCGTCGTCTTGCTGTTaGCGCCCAAACACCCCATGC +
Preference number: 4 (lower is better)
Translates to: LETLPPTMAWGWQSGSPGPSSCC*RPNTPC
Trigger: GCATGGGGTGTTTGGGCGGCAACAGCAAGACGACGG...CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGAGCCGGTGCGTCTGCTaGAGGTCGCGCTTCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GSEMELETLPPTMAWGWQSRCVC*RSRFWS
Trigger: CGACCAGAAGCGCGACCTGCAGCAGACGCACCGGCT...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR GCA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTCATCTCTCGTCAGCCTaGAGCTTCATAAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGHLSSA*SFIKGE
Trigger: TTCTCCCTTTATGAAGCTGCAGGCTGACGAGAGATG...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTCATACTTCCCTTTCTTaGTGGGGGTGCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGHTSLS*WGCSFS
Trigger: TGAAAAGCTGCACCCCCAGCAAGAAAGGGAAGTATG...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGGGCAATGAGAGTCGGTaGTTTGGGGGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: AVSAMRVGGLGVGCCGRPGNESR*FGGGML
Trigger: CAGCATCCCACCCCCAAACCACCGACTCTCATTGCC...CGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCATGCAGGTCGCGCTTCTaGTCGCGCAGCATGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RQRDGTRDSASYHGMGLACRSRF*SRSMRS
Trigger: CGACCGCATGCTGCGCGACCAGAAGCGCGACCTGCA...TGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR TCA 90 bp CTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGAGCCTCTCGAGTAGCTaGGATTACAGGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LETLPPTMAWGWQSGSPGSLSSS*DYRCPP
Trigger: TGGCGGGCACCTGTAATCTCAGCTACTCGAGAGGCT...CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCCTTTTCTTTCTGGTTTaGACTTGCTCGGAAAGCGTA +
Preference number: 4 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSILFFLV*TCSESV
Trigger: TACGCTTTCCGAGCAAGTTCAAACCAGAAAGAAAAG...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCCCCTTGGTCTCAGGTaGGGAGGGCCCGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMPLGLR*GGPVPC
Trigger: GCAGGGAACGGGCCCTCCTCACCTGAGACCAAGGGG...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAAACACCCCATGCCTaGCCGCTGGGATGGACGTCA +
Preference number: 4 (lower is better)
Translates to: EGTEVARGLVVDTERDRRQTPHA*PLGWTS
Trigger: TGACGTCCATCCCAGCGGGCAGGCATGGGGTGTTTG...CCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp GCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTGTAGCTACTGCAGGCTaGGACGTAAATGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: ASYHGMGLAVRQSGAPLRVATAG*DVNDSC
Trigger: ACAGCTATCATTTACGTCGCAGCCTGCAGTAGCTAC...ACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGTTGGGGGTGGGATGCTaGGGGAGGCCGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: LETLPPTMAWGWQSGSPGLGVGC*GRPYSM
Trigger: CATTGAATACGGCCTCCCGCAGCATCCCACCCCCAA...CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGGCATTTTCTGCTGTGTaGAAGGGGTGGCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: WGSHPERFCCSVGNESRWAFSAV*KGWRPP
Trigger: AGGCGGCCGCCACCCCTTGCACACAGCAGAAAATGC...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CCA 90 bp GACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGACCATGGCATGGGGCTaGCAGTCAGGCAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: DRRQRDGTRDSASYHGMGTMAWG*QSGSPG
Trigger: CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT...CCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTTCGGCTTGTCTGCTTTaGGCCGAGCGCATGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HPERFCCSVGNESRWFGGSACLL*AERMPG
Trigger: GCCCGGCATGCGCTCGGCCCAAAGCAGACAAGCCGA...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CCA 90 bp GCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGCCCCCAGGAAGGGCCTaGTGGCCCCAGCACACACTT +
Preference number: 4 (lower is better)
Translates to: APTRRDSAAVSAMRVGGLPPGRA*WPQHTL
Trigger: AAGTGTGTGCTGGGGCCACCAGGCCCTTCCTGGGGG...CAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGAGTGCAGGGAGAAGGCTaGGCCCCCTTGGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RGSQRLGGRHRTGQTAARVQGEG*APLVSG
Trigger: ACCTGAGACCAAGGGGGCCCAGCCTTCTCCCTGCAC...TCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGGTGCAGGGAGAAGGCTaGGCCCCCTTGGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DGSEMELETLPPTMAWGWVQGEG*APLVSG
Trigger: ACCTGAGACCAAGGGGGCCCAGCCTTCTCCCTGCAC...CCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTTGCTGGAGCCTGGGCTaGTCGGGGGTGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GSHPERFCCSVGNESRWFCWSLG*SGVSCA
Trigger: TGCACAGCTCACCCCCGACCAGCCCAGGCTCCAGCA...AAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGTGCTGGAGCCTGGGCTaGTCGGGGGTGAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: APTRRDSAAVSAMRVGGLCWSLG*SGVSCA
Trigger: TGCACAGCTCACCCCCGACCAGCCCAGGCTCCAGCA...CAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGTGTCGCGGCAGTCGTTaGACACCCTGCGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: GSQRLGGRHRTGQTAARWCRGSR*TPCGCS
Trigger: AGAACATCCGCAGGGTGTTCAACGACTGCCGCGACA...CCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGACCTGGGCAGTTAATGTaGGAAGCGAGGGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VARGLVVDTERDRRQRDGPGQLM*EARAGH
Trigger: GTGCCCTGCCCTCGCTTCTCACATTAACTGCCCAGG...TCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp ACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCGACGTGTGCGGCTCCTaGGACGGCTCCTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TDGSEMELETLPPTMAWGDVCGS*DGSSLS
Trigger: GGAAAGAGAGGAGCCGTCGCAGGAGCCGCACACGTC...GCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp ACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTTCCAGGAAGTATTGTaGACAGTCAATCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: TMAWGWQSGSPGRRSVAGFQEVL*TVNQLV
Trigger: TACCAGCTGATTGACTGTGCACAATACTTCCTGGAA...CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGGGTTTGGGGGTGGGATaGTGCGGGAGGCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: GSEMELETLPPTMAWGWQGLGVG*CGRPYS
Trigger: TGAATACGGCCTCCCGCAGCATCCCACCCCCAAACC...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGGGTTTGGGGGTGGGATaGTGCGGGAGGCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: DGSEMELETLPPTMAWGWGLGVG*CGRPYS
Trigger: TGAATACGGCCTCCCGCAGCATCCCACCCCCAAACC...CCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCACCCGGAGAGATTCTaGTGCAGTGTCGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: AAVSAMRVGGLGVGCCGRHPERF*CSVGNE
Trigger: CTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG...CCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGACGACCTCGGCTCACTaGAATCTCCACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSQRLGGRHRTGQTAARWTTSAH*NLHLPG
Trigger: ACCTGGGAGGTGGAGATTGCAGTGAGCCGAGGTCGT...CCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCGAACGCTGCAGCTTTTaGAGGTTGATAAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSIERCSF*RLIKDV
Trigger: AACATCTTTTATCAACCTGCAAAAGCTGCAGCGTTC...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCCATACACTGCCCCTTaGCAAACACCCTTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LETLPPTMAWGWQSGSPGPYTAP*QTPFRE
Trigger: TTCCCGGAAGGGTGTTTGGCAAGGGGCAGTGTATGG...CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGTTGGCCAGCGGAACTaGAGGTATTATAGTACTCAT +
Preference number: 4 (lower is better)
Translates to: PPTMAWGWQSGSPGRRSVVGQRN*RYYSTH
Trigger: ATGAGTACTATAATACCTCCAGTTCCGCTGGCCAAC...GACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTGCTCTTGATGTAGTCTaGTCGAAATTGGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ASYHGMGLAVRQSGAPLRALDVV*SKLVFR
Trigger: CCTGAAAACCAATTTCGATCAGACTACATCAAGAGC...ACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTCAGAACTCTGCATCTaGGGAGGTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGSELCI*GGPGLW
Trigger: CCACAGACCAGGACCTCCTCAGATGCAGAGTTCTGA...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTCTACACAACCAAACCTaGGGGGACAGAGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGLHNQT*GDRGSQ
Trigger: CTGGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAG...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACCTGCAGTGTCGGCAATaGGAGTCGGTGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KPEGTEVARGLVVDTERDLQCRQ*ESVVWG
Trigger: CCCCCAAACCACCGACTCTCATTGCCGACACTGCAG...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTCTGCAGTGTCGGCAATaGGAGTCGGTGGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSHPERFCCSVGNESRWFLQCRQ*ESVVWG
Trigger: CCCCCAAACCACCGACTCTCATTGCCGACACTGCAG...AAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCGTGTGTCATAATGTTTaGGGCTGTATTTGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSIVCHNV*GCICKS
Trigger: AGACTTACAAATACAGCCTCAAACATTATGACACAC...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGCCTGGGCAGTTAATGTaGGAAGCGAGGGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEPGQLM*EARAGH
Trigger: GTGCCCTGCCCTCGCTTCTCACATTAACTGCCCAGG...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTGACGTGTGCGGCTCCTaGGACGGCTCCTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: WSTQNGTDGSEMELETLPDVCGS*DGSSLS
Trigger: GGAAAGAGAGGAGCCGTCGCAGGAGCCGCACACGTC...AGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp AGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGAGGTCTTCCGTCGTCTTaGTGTTGCCGCCCAAACACC +
Preference number: 4 (lower is better)
Translates to: RGSQRLGGRHRTGQTAARGLPSS*CCRPNT
Trigger: GGTGTTTGGGCGGCAACAGCAAGACGACGGAAGACC...TCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp CCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACTTACTTGTCTCTCCTaGTGGAGCCTGGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: PEGTEVARGLVVDTERDRLTCLS*WSLGWS
Trigger: CGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAG...TCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGCCTGGCAGAGAACGCTaGAGCTTTTGCAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: AVSAMRVGGLGVGCCGRPPGRER*SFCRLI
Trigger: TATCAACCTGCAAAAGCTGCAGCGTTCTCTGCCAGG...CGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGCCCATGCCTGCCCGCTaGGATGGACGTCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEPMPAR*DGRQEV
Trigger: AACTTCCTGACGTCCATCCCAGCGGGCAGGCATGGG...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CCA 90 bp ACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCCCTCCTACCATGGCATaGGGCTGGCAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TDGSEMELETLPPTMAWGPPTMA*GWQSGS
Trigger: ACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG...GCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGAATGGTCTTGATCTCCTaGCCTCGTGATCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGSQRLGGRHRTGQTAARMVLIS*PRDPPA
Trigger: GGCAGGCGGATCACGAGGCCAGGAGATCAAGACCAT...TCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CAA 72 bp ACAACCAAACCTGAGGGGACAGAGGTAGCCAGAGGCTaGGTGGTCGACACAGAACGGGACAGACGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: TTKPEGTEVARG*VVDTERDRRQR
Trigger: TCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTTGGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
3UTR CAA 72 bp CCAGACATTTTCCACTCAGGCACACTTGGGCCTTACTaGTCTCTCCTGCTGGAGCCTGGGCTGGTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PDIFHSGTLGPY*SLLLEPGLVGG
Trigger: ACCCCCGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGAAAATGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTTGCAATTTGTACCCCTaGATTGAGTTCAGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGCNLYP*IEFRFL
Trigger: TAAAAACCTGAACTCAATTCAGGGGTACAAATTGCA...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp ACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGCAATTTGTACCCCTaGATTGAGTTCAGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: TMAWGWQSGSPGRRSVAGCNLYP*IEFRFL
Trigger: TAAAAACCTGAACTCAATTCAGGGGTACAAATTGCA...CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGGCCAGGGGCCAGTTTTaGCAGGTCAGTGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMARGQF*QVSVPD
Trigger: GTCTGGGACACTGACCTGTCAAAACTGGCCCCTGGC...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGTCCACGGTGCCTCTCTaGATCTCTGTTATGGATCCC +
Preference number: 4 (lower is better)
Translates to: EGTEVARGLVVDTERDRRSTVPL*ISVMDP
Trigger: GGGATCCATAACAGAGATTCAGAGAGGCACCGTGGA...CCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGTCCACGGTGCCTCTCTaGATCTCTGTTATGGATCCC +
Preference number: 4 (lower is better)
Translates to: GSQRLGGRHRTGQTAARWSTVPL*ISVMDP
Trigger: GGGATCCATAACAGAGATTCAGAGAGGCACCGTGGA...CCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGGGTCTTCCGTCGTCTTaGTGTTGCCGCCCAAACACC +
Preference number: 4 (lower is better)
Translates to: DRRQRDGTRDSASYHGMGGLPSS*CCRPNT
Trigger: GGTGTTTGGGCGGCAACAGCAAGACGACGGAAGACC...CCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp GCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGGCCAGGCGCTCTTTCTaGAACTGCTTCTCGATCTTT +
Preference number: 4 (lower is better)
Translates to: AAVSAMRVGGLGVGCCGRARRSF*NCFSIF
Trigger: AAAGATCGAGAAGCAGTTGCAGAAAGAGCGCCTGGC...CCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTTGCCAAGACTTTTTCTaGCAGCATATCTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGCQDFF*QHILFV
Trigger: AACAAACAAGATATGCTGGCAGAAAAAGTCTTGGCA...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTCCGGAGAGATTCTGCTaGAGTGTCGGCAATGAGAGT +
Preference number: 4 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGPERFC*SVGNES
Trigger: ACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGG...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGCCGGAGAGATTCTGCTaGAGTGTCGGCAATGAGAGT +
Preference number: 4 (lower is better)
Translates to: WGSHPERFCCSVGNESRWPERFC*SVGNES
Trigger: ACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGG...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCTCCTTCGGCTTGTCTaGTTTGGGCCGAGCGCATGC +
Preference number: 4 (lower is better)
Translates to: WSTQNGTDGSEMELETLPLLRLV*FGPSAC
Trigger: GCATGCGCTCGGCCCAAAGCAGACAAGCCGAAGGAG...AGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR GCA 90 bp GCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGCTTACTTGTCTCTCCTaGTGGAGCCTGGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: APTRRDSAAVSAMRVGGLLTCLS*WSLGWS
Trigger: CGACCAGCCCAGGCTCCAGCAGGAGAGACAAGTAAG...CAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGAAAGCAATAGAGAGTTaGAGACGTGTGCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AAVSAMRVGGLGVGCCGRKAIES*RRVRLL
Trigger: CAGGAGCCGCACACGTCTCCAACTCTCTATTGCTTT...CCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CCA 90 bp TGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCATTGGTTTTCAGGGTTaGCCAGCGGAACTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: CSVGNESRWFGGGMLREAIGFQG*PAELEV
Trigger: TACCTCCAGTTCCGCTGGCCAACCCTGAAAACCAAT...GGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGGGAGGTCCTGGTCTGTaGGTGTGTAGTCAACCAAGC +
Preference number: 4 (lower is better)
Translates to: GSEMELETLPPTMAWGWQGGPGL*VCSQPS
Trigger: GCTTGGTTGACTACACACCCACAGACCAGGACCTCC...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGATCTTCTCCTGCATCTaGTGTTGCGTCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AVSAMRVGGLGVGCCGRPIFSCI*CCVFRN
Trigger: GTTCCTGAAGACGCAACACCAGATGCAGGAGAAGAT...CGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGGGCAATGAGAGTCGGTaGTTTGGGGGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: DRRQRDGTRDSASYHGMGGNESR*FGGGML
Trigger: CAGCATCCCACCCCCAAACCACCGACTCTCATTGCC...CCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTAATCAGAGACGGCCGTaGCTCAGGGCACTGCACGAA +
Preference number: 4 (lower is better)
Translates to: HPERFCCSVGNESRWFGGNQRRP*LRALHE
Trigger: TTCGTGCAGTGCCCTGAGCCACGGCCGTCTCTGATT...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTAATCAGAGACGGCCGTaGCTCAGGGCACTGCACGAA +
Preference number: 4 (lower is better)
Translates to: GSHPERFCCSVGNESRWFNQRRP*LRALHE
Trigger: TTCGTGCAGTGCCCTGAGCCACGGCCGTCTCTGATT...AAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGAACTCCTTTCAGCCATaGGCTCCTGCATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EGTEVARGLVVDTERDRRNSFQP*APASSS
Trigger: TGAGCTGGATGCAGGAGCCCATGGCTGAAAGGAGTT...CCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCTGTAGTCAACCAAGCTaGCGCTGTCGATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: CSVGNESRWFGGGMLREACSQPS*RCRFFP
Trigger: TGGAAAGAATCGACAGCGTCAGCTTGGTTGACTACA...GGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGGGAGGCCGTATTCAATaGCAACAGAAGCTACACAAC +
Preference number: 4 (lower is better)
Translates to: LETLPPTMAWGWQSGSPGGGRIQ*QQKLHN
Trigger: GTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCC...CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp AGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCGCCTGGCCAACATGGTaGAACCTCGTCTCCGCTAGA +
Preference number: 4 (lower is better)
Translates to: RDSAAVSAMRVGGLGVGCAWPTW*NLVSAR
Trigger: TCTAGCGGAGACGAGGTTTCACCATGTTGGCCAGGC...GCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGGAACAGATGCTTAGTTaGGCATCAAGGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGTEVARGLVVDTERDRREQMLS*ASRGRK
Trigger: CTTCCTGCCCCTTGATGCTCAACTAAGCATCTGTTC...CCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGGCCAGGCGCTCTTTCTaGAACTGCTTCTCGATCTTT +
Preference number: 4 (lower is better)
Translates to: WGSHPERFCCSVGNESRWARRSF*NCFSIF
Trigger: AAAGATCGAGAAGCAGTTGCAGAAAGAGCGCCTGGC...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGGGATCTCTCAAAGCATaGCTTCACGCCTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: EGTEVARGLVVDTERDRRGSLKA*LHAFIV
Trigger: GACGATGAAGGCGTGAAGGCATGCTTTGAGAGATCC...CCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGGGATCTCTCAAAGCATaGCTTCACGCCTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: GSQRLGGRHRTGQTAARWGSLKA*LHAFIV
Trigger: GACGATGAAGGCGTGAAGGCATGCTTTGAGAGATCC...CCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGTAGCTACTGCAGGCTaGGACGTAAATGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: CSVGNESRWFGGGMLREAVATAG*DVNDSC
Trigger: ACAGCTATCATTTACGTCGCAGCCTGCAGTAGCTAC...GGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGTCATACTGCTTGAGGTaGATCCGCTGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: EGTEVARGLVVDTERDRRSYCLR*IRWMMS
Trigger: CGACATCATCCAGCGGATGCACCTCAAGCAGTATGA...CCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGCACAAGAGCTCATACTaGTTGAGGTGCATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GSEMELETLPPTMAWGWQHKSSY*LRCIRW
Trigger: CCAGCGGATGCACCTCAAGCAGTATGAGCTCTTGTG...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGTTGGGGGTGGGATGCTaGGGGAGGCCGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMLGVGC*GRPYSM
Trigger: CATTGAATACGGCCTCCCGCAGCATCCCACCCCCAA...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp AGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTTGGGGGTGGGATGCTaGGGGAGGCCGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: RDSAAVSAMRVGGLGVGCLGVGC*GRPYSM
Trigger: CATTGAATACGGCCTCCCGCAGCATCCCACCCCCAA...GCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGCACCCGGAGAGATTCTaGTGCAGTGTCGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEHPERF*CSVGNE
Trigger: CTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCCATACTTCCCTTTCTTaGTGGGGGTGCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CSVGNESRWFGGGMLREAHTSLS*WGCSFS
Trigger: TGAAAAGCTGCACCCCCAGCAAGAAAGGGAAGTATG...GGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp ACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGAGTACAGATGTGATGTaGAGAACATATTGTTTTCGT +
Preference number: 4 (lower is better)
Translates to: TMAWGWQSGSPGRRSVAGSTDVM*RTYCFR
Trigger: ACGAAAACAATATGTTCTGCACATCACATCTGTACT...CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTATGTCGTCACTCACATaGACGACAGTCCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGMSSLT*TTVLVP
Trigger: GGGAACAAGGACTGTCGTGCATGTGAGTGACGACAT...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACTCAGCCATGGGCTCCTaGATCCAGCTCATGATGCTG +
Preference number: 4 (lower is better)
Translates to: KPEGTEVARGLVVDTERDSAMGS*IQLMML
Trigger: CAGCATCATGAGCTGGATGCAGGAGCCCATGGCTGA...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATTTTCATCGACGCCCTaGTCTTCCGTCGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RGSQRLGGRHRTGQTAARFSSTP*SSVVLL
Trigger: CAGCAAGACGACGGAAGACCAGGGCGTCGATGAAAA...TCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CCA 90 bp GCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCCAACATCAAACATGTaGAAGTTTACTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: ASYHGMGLAVRQSGAPLRPTSNM*KFTLST
Trigger: AGTGGACAAAGTAAACTTCCACATGTTTGATGTTGG...ACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGTTGAGGTGCATCCGCTaGATGATGTCGCGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMLRCIR*MMSRQS
Trigger: CGACTGCCGCGACATCATCCAGCGGATGCACCTCAA...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGTTGAGGTGCATCCGCTaGATGATGTCGCGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: QNGTDGSEMELETLPPTMLRCIR*MMSRQS
Trigger: CGACTGCCGCGACATCATCCAGCGGATGCACCTCAA...CATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGGCAATGAGAGTCGGTaGTTTGGGGGTGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QNGTDGSEMELETLPPTMGNESR*FGGGML
Trigger: CAGCATCCCACCCCCAAACCACCGACTCTCATTGCC...CATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCATGGTCTTGATCTCCTaGCCTCGTGATCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RDSAAVSAMRVGGLGVGCMVLIS*PRDPPA
Trigger: GGCAGGCGGATCACGAGGCCAGGAGATCAAGACCAT...GCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCACCACTCAGGCACACTTaGGCCTTACTTGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RQRDGTRDSASYHGMGLAPLRHT*ALLVSP
Trigger: AGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGG...TGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCATGCCCATTTGACCTaGCAGAGAACGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: DGSEMELETLPPTMAWGWHAHLT*QRTLQL
Trigger: AAGCTGCAGCGTTCTCTGCCAGGTCAAATGGGCATG...CCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGAGGGCACCGTCCAGGTaGACTTTATCCTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: APTRRDSAAVSAMRVGGLRAPSR*TLSFRE
Trigger: CTCCCTGAAGGATAAAGTCCACCTGGACGGTGCCCT...CAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CAA 72 bp GATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTaGGGGGTGGGATGCTGCGGGAGGCCGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: DSAAVSAMRVGG*GVGCCGRPYSM
Trigger: CATTGAATACGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp AGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCCTACACAACCAAACCTaGGGGGACAGAGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RDSAAVSAMRVGGLGVGCLHNQT*GDRGSQ
Trigger: CTGGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAG...GCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGAGTGCTACCTCCCACGTaGGGATGTGGTTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: PEGTEVARGLVVDTERDRVLPPT*GCGFDH
Trigger: ATGATCAAAACCACATCCTCACGTGGGAGGTAGCAC...TCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp AGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCCCTGCATCCAGCTCATaGTGCTGGTACGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: RDSAAVSAMRVGGLGVGCPASSS*CWYDRF
Trigger: GAACCTGTCGTACCAGCATCATGAGCTGGATGCAGG...GCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTTGCCAAGACTTTTTCTaGCAGCATATCTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: EQSLGLAPRQQARVPSAPCQDFF*QHILFV
Trigger: AACAAACAAGATATGCTGGCAGAAAAAGTCTTGGCA...AGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR GCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGATCTTCTCCTaGATCTGGTGTTGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: WGSHPERFCCSVGNESRWFGIFS*IWCCVF
Trigger: GAAGACGCAACACCAGATGCAGGAGAAGATCCCAAA...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGTCATACTGCTTGAGGTaGATCCGCTGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: DGSEMELETLPPTMAWGWSYCLR*IRWMMS
Trigger: CGACATCATCCAGCGGATGCACCTCAAGCAGTATGA...CCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGCACAAGAGCTCATACTaGTTGAGGTGCATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEHKSSY*LRCIRW
Trigger: CCAGCGGATGCACCTCAAGCAGTATGAGCTCTTGTG...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp ACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCCACAAGAGCTCATACTaGTTGAGGTGCATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TDGSEMELETLPPTMAWGHKSSY*LRCIRW
Trigger: CCAGCGGATGCACCTCAAGCAGTATGAGCTCTTGTG...GCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp ATTCAAATGCCTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTTTTGGGCCGAGCGCATaGCGGGCTCCCTTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: IQMPEASSDSECDCKRVSFGPSA*RAPFAA
Trigger: GGCGGCGAAGGGAGCCCGGCATGCGCTCGGCCCAAA...AGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAGGCATTTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR GCA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCAGCTGCTCGGTGCGCTaGCGCTTCTCCTTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSSCSVR*RFSFGL
Trigger: CAAGCCGAAGGAGAAGCGGCAGCGCACCGAGCAGCT...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR GCA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCCACTCAGCTGCTCGGTaGGCTGCCGCTTCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSHSAAR*AAASPS
Trigger: CGAAGGAGAAGCGGCAGCGCACCGAGCAGCTGAGTG...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR GCA 90 bp TGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGCAGCATGCGGTCGATaGCCCGGCTCACTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: CCGRPYSMTTEATQPNLRAACGR*PGSLSS
Trigger: CGAGGAAAGTGAGCCGGGGCATCGACCGCATGCTGC...CCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR GCA 90 bp GCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGTACACCCTCTCCAAGTaGTACCTCCCACGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: APTRRDSAAVSAMRVGGLYTLSK*YLPRED
Trigger: ATCCTCACGTGGGAGGTAGCACTTGGAGAGGGTGTA...CAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACCGTAGCTCCATACACTaGCCCTTGCCAAACACCCTT +
Preference number: 4 (lower is better)
Translates to: KPEGTEVARGLVVDTERDRSSIH*PLPNTL
Trigger: AAGGGTGTTTGGCAAGGGGCAGTGTATGGAGCTACG...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGGGTCACTCTGTCGCTTaGGGTCGACTCCAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMGHSVA*GRLQVL
Trigger: CAAGACTTGGAGTCGACCCCAAGCGACAGAGTGACC...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGGTCACTCTGTCGCTTaGGGTCGACTCCAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: QNGTDGSEMELETLPPTMGHSVA*GRLQVL
Trigger: CAAGACTTGGAGTCGACCCCAAGCGACAGAGTGACC...CATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
3UTR CAA 72 bp AGGTCAGTGTCCCAGACATTTTCCACTCAGGCACACTaGGGCCTTACTTGTCTCTCCTGCTGGAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSVSQTFSTQAH*GLTCLSCWSLG
Trigger: GCCCAGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGAAAATGTCTGGGACACTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGATGTAGTCAACCAAGCTaGCGCTGTCGATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PEGTEVARGLVVDTERDRCSQPS*RCRFFP
Trigger: TGGAAAGAATCGACAGCGTCAGCTTGGTTGACTACA...TCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTGTAGTCAACCAAGCTaGCGCTGTCGATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GSEMELETLPPTMAWGWQCSQPS*RCRFFP
Trigger: TGGAAAGAATCGACAGCGTCAGCTTGGTTGACTACA...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGAAGCGTAAGACAAGATaGAGAGCAGGCGCCATTATA +
Preference number: 4 (lower is better)
Translates to: WGSHPERFCCSVGNESRWKRKTR*RAGAII
Trigger: TATAATGGCGCCTGCTCTTCATCTTGTCTTACGCTT...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCGCCAGGGGCCAGTTTTaGCAGGTCAGTGTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSARGQF*QVSVPD
Trigger: GTCTGGGACACTGACCTGTCAAAACTGGCCCCTGGC...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTTCCTCGCTGACCGATaGCCCTGGAACTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: LRPAATLNVTVKGFLVTLFLADR*PWNSTV
Trigger: CACCGTGGAGTTCCAGGGTCATCGGTCAGCGAGGAA...CAGAGTGACCAGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGGGGAACCAATCAGCATaGCATTCCTGGGCAGTTAAT +
Preference number: 4 (lower is better)
Translates to: DGSEMELETLPPTMAWGWGNQSA*HSWAVN
Trigger: ATTAACTGCCCAGGAATGTCATGCTGATTGGTTCCC...CCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCGCCGCCTGGCTCTCTTaGACCCCGAGCCGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: VFNDNRSYTTKPEGTEVAAAWLS*TPSRES
Trigger: ACTTTCCCGGCTCGGGGTGCAAGAGAGCCAGGCGGC...GGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS-3UTR GCA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGGTAGCTACTGCAGGCTaGGACGTAAATGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSEMELETLPPTMAWGWQVATAG*DVNDSC
Trigger: ACAGCTATCATTTACGTCGCAGCCTGCAGTAGCTAC...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCATTTGGGATCTTCTCCTaGATCTGGTGTTGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RQRDGTRDSASYHGMGLAFGIFS*IWCCVF
Trigger: GAAGACGCAACACCAGATGCAGGAGAAGATCCCAAA...TGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp AGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGACATCTCTCGTCAGCCTaGAGCTTCATAAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RGSQRLGGRHRTGQTAARHLSSA*SFIKGE
Trigger: TTCTCCCTTTATGAAGCTGCAGGCTGACGAGAGATG...TCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGATGTCGTCACTCACATaGACGACAGTCCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: DRRQRDGTRDSASYHGMGMSSLT*TTVLVP
Trigger: GGGAACAAGGACTGTCGTGCATGTGAGTGACGACAT...CCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCACGCGCGGAGTAAAATaGCTTTTTACACGAGAATTG +
Preference number: 4 (lower is better)
Translates to: CSVGNESRWFGGGMLREATRGVK*LFTREL
Trigger: CAATTCTCGTGTAAAAAGGCATTTTACTCCGCGCGT...GGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS-3UTR CCA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTATTGGTTTTCAGGGTTaGCCAGCGGAACTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: HPERFCCSVGNESRWFGGIGFQG*PAELEV
Trigger: TACCTCCAGTTCCGCTGGCCAACCCTGAAAACCAAT...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp TGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGCCTCCTACCATGGCATaGGGCTGGCAGTCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CCGRPYSMTTEATQPNLRPPTMA*GWQSGS
Trigger: ACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG...CCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTCCCATGGAGACGACCTaGACACATGTATTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: HPERFCCSVGNESRWFGGPMETT*THVFLG
Trigger: CCCTAGAAATACATGTGTCCAGGTCGTCTCCATGGG...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGGCAAAGAAAAGCCCATaGAGACGACCTGGACACATG +
Preference number: 4 (lower is better)
Translates to: DRRQRDGTRDSASYHGMGAKKSP*RRPGHM
Trigger: CATGTGTCCAGGTCGTCTCCATGGGCTTTTCTTTGC...CCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGTGTCCACGGCGCAGGTaGAGTGCGGGTAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: CCGRPYSMTTEATQPNLRCPRRR*SAGSSN
Trigger: ATTACTGCTACCCGCACTTCACCTGCGCCGTGGACA...CCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTTCAATAAAGGGAGAATaGATAATGGGGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: HPERFCCSVGNESRWFGGSIKGE*IMGLPP
Trigger: GGGTGGGAGCCCCATTATTCATTCTCCCTTTATTGA...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGCCAAGTTCTCCTCGATaGATCAATAAAGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: WGSHPERFCCSVGNESRWPSSPR*INKGRM
Trigger: CATTCTCCCTTTATTGATTCATCGAGGAGAACTTGG...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp AGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGACCCACTTGGGGAACTTaGAGAAGTGTTTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: RGSQRLGGRHRTGQTAARPTWGT*RSVSLA
Trigger: TGCTAATGAAACACTTCTTCAAGTTCCCCAAGTGGG...TCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGCAGCTGAGGGCTTTATaGGACAGTGGATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CCGRPYSMTTEATQPNLRQLRAL*DSGWGG
Trigger: GCCTCCCCATCCACTGTCTCATAAAGCCCTCAGCTG...CCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGTGGGATGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAACAGCTGAGGGCTTTATaGGACAGTGGATGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGMLREAVFNDNRSYTTKQLRAL*DSGWGG
Trigger: GCCTCCCCATCCACTGTCTCATAAAGCCCTCAGCTG...TTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCATCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGAAAGCGTAAGACAAGATaGAGAGCAGGCGCCATTATA +
Preference number: 4 (lower is better)
Translates to: PEGTEVARGLVVDTERDRKRKTR*RAGAII
Trigger: TATAATGGCGCCTGCTCTTCATCTTGTCTTACGCTT...TCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp ACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCGGGAACCAATCAGCATaGCATTCCTGGGCAGTTAAT +
Preference number: 4 (lower is better)
Translates to: TDGSEMELETLPPTMAWGGNQSA*HSWAVN
Trigger: ATTAACTGCCCAGGAATGTCATGCTGATTGGTTCCC...GCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGGGATCTCTCAAAGCATaGCTTCACGCCTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMGSLKA*LHAFIV
Trigger: GACGATGAAGGCGTGAAGGCATGCTTTGAGAGATCC...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTCCAGGAAGTATTGTaGACAGTCAATCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: WGSHPERFCCSVGNESRWFQEVL*TVNQLV
Trigger: TACCAGCTGATTGACTGTGCACAATACTTCCTGGAA...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGTCAACGTGTGCCTGGTaGTCTCAGCATAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: QNGTDGSEMELETLPPTMSTCAW*SQHNFP
Trigger: GGGAAAGTTATGCTGAGAGCACCAGGCACACGTTGA...CATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGCCTGGCAGAGAACGCTaGAGCTTTTGCAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: QNGTDGSEMELETLPPTMPGRER*SFCRLI
Trigger: TATCAACCTGCAAAAGCTGCAGCGTTCTCTGCCAGG...CATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGATTGGTTTTCAGGGTTaGCCAGCGGAACTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMIGFQG*PAELEV
Trigger: TACCTCCAGTTCCGCTGGCCAACCCTGAAAACCAAT...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGATCAGCTGGTATTCGTTaGATCTCTCAAAGCATGCCT +
Preference number: 4 (lower is better)
Translates to: VARGLVVDTERDRRQRDGSAGIR*ISQSMP
Trigger: AGGCATGCTTTGAGAGATCCAACGAATACCAGCTGA...TCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGACTCTCTCAGCCTGTTaGTGTTGTTATCTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: GSQRLGGRHRTGQTAARWTLSAC*CCYLLE
Trigger: TTCGAGAAGATAACAACACCAACAGGCTGAGAGAGT...CCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp ATTCAAATGCCTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTCGCTCCGTCGCAGGGTaGCGGCAGCATCCTCACAAG +
Preference number: 4 (lower is better)
Translates to: IQMPEASSDSECDCKRVSRSVAG*RQHPHK
Trigger: CTTGTGAGGATGCTGCCGCCACCCTGCGACGGAGCG...AGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAGGCATTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTACTTCCCTTTCTTGCTaGGGGTGCAGCTTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: HPERFCCSVGNESRWFGGTSLSC*GCSFSV
Trigger: AACTGAAAAGCTGCACCCCCAGCAAGAAAGGGAAGT...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGTTCAACGTGTGCCTaGTGCTCTCAGCATAACTTT +
Preference number: 4 (lower is better)
Translates to: RGSQRLGGRHRTGQTAARCSTCA*CSQHNF
Trigger: AAAGTTATGCTGAGAGCACCAGGCACACGTTGAACA...TCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGATGTTCAACGTGTGCCTaGTGCTCTCAGCATAACTTT +
Preference number: 4 (lower is better)
Translates to: PEGTEVARGLVVDTERDRCSTCA*CSQHNF
Trigger: AAAGTTATGCTGAGAGCACCAGGCACACGTTGAACA...TCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp TGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTGCAAAGAAAAGCCCATaGAGACGACCTGGACACATG +
Preference number: 4 (lower is better)
Translates to: WSTQNGTDGSEMELETLPAKKSP*RRPGHM
Trigger: CATGTGTCCAGGTCGTCTCCATGGGCTTTTCTTTGC...AGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp AGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCGGAGGCCGTATTCAATaGCAACAGAAGCTACACAAC +
Preference number: 4 (lower is better)
Translates to: RDSAAVSAMRVGGLGVGCGGRIQ*QQKLHN
Trigger: GTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCC...GCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGGTGTGTCATAATGTTTaGGGCTGTATTTGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: LETLPPTMAWGWQSGSPGVCHNV*GCICKS
Trigger: AGACTTACAAATACAGCCTCAAACATTATGACACAC...CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGATGTGTGTGTTGCACTaGCTGTCTATAAAGTTATCC +
Preference number: 4 (lower is better)
Translates to: WGSHPERFCCSVGNESRWMCVLH*LSIKLS
Trigger: GGATAACTTTATAGACAGTCAGTGCAACACACACAT...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCATTCCAGGAAGTATTGTaGACAGTCAATCAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: RQRDGTRDSASYHGMGLAFQEVL*TVNQLV
Trigger: TACCAGCTGATTGACTGTGCACAATACTTCCTGGAA...TGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGTGCCAAGACTTTTTCTaGCAGCATATCTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LETLPPTMAWGWQSGSPGCQDFF*QHILFV
Trigger: AACAAACAAGATATGCTGGCAGAAAAAGTCTTGGCA...CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACTCCTGCATCTGGTGTTaGGTCTTCAGGAACAGTATA +
Preference number: 4 (lower is better)
Translates to: KPEGTEVARGLVVDTERDSCIWC*VFRNSI
Trigger: TATACTGTTCCTGAAGACGCAACACCAGATGCAGGA...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp AGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTTTGGGATCTTCTCCTaGATCTGGTGTTGCGTCTTC +
Preference number: 4 (lower is better)
Translates to: RDSAAVSAMRVGGLGVGCFGIFS*IWCCVF
Trigger: GAAGACGCAACACCAGATGCAGGAGAAGATCCCAAA...GCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGCACCCGGAGAGATTCTaGTGCAGTGTCGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: LRPAATLNVTVKGFLVTLHPERF*CSVGNE
Trigger: CTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG...CAGAGTGACCAGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGATCTCGATCTTTTTGTTaGCCTCGCGTCGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: VARGLVVDTERDRRQRDGSRSFC*PRVVLF
Trigger: AAAAAGAACGACGCGAGGCCAACAAAAAGATCGAGA...TCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CCA 90 bp ACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCGTTGGCCAGCGGAACTaGAGGTATTATAGTACTCAT +
Preference number: 4 (lower is better)
Translates to: TDGSEMELETLPPTMAWGVGQRN*RYYSTH
Trigger: ATGAGTACTATAATACCTCCAGTTCCGCTGGCCAAC...GCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGTCAGCTGGTATTCGTTaGATCTCTCAAAGCATGCCT +
Preference number: 4 (lower is better)
Translates to: DRRQRDGTRDSASYHGMGSAGIR*ISQSMP
Trigger: AGGCATGCTTTGAGAGATCCAACGAATACCAGCTGA...CCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACTCAGCTGGTATTCGTTaGATCTCTCAAAGCATGCCT +
Preference number: 4 (lower is better)
Translates to: KPEGTEVARGLVVDTERDSAGIR*ISQSMP
Trigger: AGGCATGCTTTGAGAGATCCAACGAATACCAGCTGA...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTCTCTCAGCCTGTTaGTGTTGTTATCTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: VARGLVVDTERDRRQRDGTLSAC*CCYLLE
Trigger: TTCGAGAAGATAACAACACCAACAGGCTGAGAGAGT...TCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGATCTTCTCCTGCATCTaGTGTTGCGTCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QNGTDGSEMELETLPPTMIFSCI*CCVFRN
Trigger: GTTCCTGAAGACGCAACACCAGATGCAGGAGAAGAT...CATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGCCTCTTCCTGTGAAGTaGTTCTCAAATTCCTATGTA +
Preference number: 4 (lower is better)
Translates to: WGSHPERFCCSVGNESRWPLPVK*FSNSYV
Trigger: TACATAGGAATTTGAGAACCACTTCACAGGAAGAGG...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCGGCGCCGGTCTCCGCTaGAGACAGCCGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSGAGLR*RQPRWR
Trigger: GCGCCACCTCGGCTGTCTCCAGCGGAGACCGGCGCC...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS-3UTR TCA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTCCAAGTTCTCCTCGATaGATCAATAAAGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: HPERFCCSVGNESRWFGGPSSPR*INKGRM
Trigger: CATTCTCCCTTTATTGATTCATCGAGGAGAACTTGG...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTACTCCTTGTTCCTCGCTaGCCGATGACCCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: AVFNDNRSYTTKPEGTEVLLVPR*PMTLEL
Trigger: GAGTTCCAGGGTCATCGGTCAGCGAGGAACAAGGAG...TACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTTCCTGCATCTGGTGTTaGGTCTTCAGGAACAGTATA +
Preference number: 4 (lower is better)
Translates to: WSTQNGTDGSEMELETLPSCIWC*VFRNSI
Trigger: TATACTGTTCCTGAAGACGCAACACCAGATGCAGGA...AGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGGAACGCTGCAGCTTTTaGAGGTTGATAAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: GSEMELETLPPTMAWGWQERCSF*RLIKDV
Trigger: AACATCTTTTATCAACCTGCAAAAGCTGCAGCGTTC...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp ATTCAAATGCCTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTCCCATGCCTGCCCGCTaGGATGGACGTCAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: IQMPEASSDSECDCKRVSPMPAR*DGRQEV
Trigger: AACTTCCTGACGTCCATCCCAGCGGGCAGGCATGGG...AGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAGGCATTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS-3UTR CCA 90 bp GACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCAAGTCTTGAACTCCTTTCAGCCATaGGCTCCTGCATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: DCKRVSGHSVAWGRLQVLNSFQP*APASSS
Trigger: TGAGCTGGATGCAGGAGCCCATGGCTGAAAGGAGTT...CAAGACTTGGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCCATGCCCATTTGACCTaGCAGAGAACGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSHAHLT*QRTLQL
Trigger: AAGCTGCAGCGTTCTCTGCCAGGTCAAATGGGCATG...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCTCTTGATGTAGTCTaGTCGAAATTGGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: QNGTDGSEMELETLPPTMALDVV*SKLVFR
Trigger: CCTGAAAACCAATTTCGATCAGACTACATCAAGAGC...CATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTTTTGTACCCCTGAATTaGGTTCAGGTTTTTACAGCT +
Preference number: 4 (lower is better)
Translates to: GSHPERFCCSVGNESRWFFVPLN*VQVFTA
Trigger: AGCTGTAAAAACCTGAACTCAATTCAGGGGTACAAA...AAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGGTGCTACCTCCCACGTaGGGATGTGGTTTTGATCAT +
Preference number: 4 (lower is better)
Translates to: LRPAATLNVTVKGFLVTLVLPPT*GCGFDH
Trigger: ATGATCAAAACCACATCCTCACGTGGGAGGTAGCAC...CAGAGTGACCAGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCTGGGCTGGTCGGGGGTaGGCTGTGCAGGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSWAGRG*AVQGEG
Trigger: GCCTTCTCCCTGCACAGCTCACCCCCGACCAGCCCA...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCCCTGGAACTCCACGGTaGCTCTCTGAATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSPGTPR*LSESLL
Trigger: TAACAGAGATTCAGAGAGGCACCGTGGAGTTCCAGG...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGTCTCGATCTTTTTGTTaGCCTCGCGTCGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: QNGTDGSEMELETLPPTMSRSFC*PRVVLF
Trigger: AAAAAGAACGACGCGAGGCCAACAAAAAGATCGAGA...CATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTTACTTTGTCCACTTaGAATCGTGTCTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGFTLST*NRVSKI
Trigger: GATTTTTGAGACACGATTCCAAGTGGACAAAGTAAA...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCACTCTCTCAGCCTGTTaGTGTTGTTATCTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: RDSAAVSAMRVGGLGVGCTLSAC*CCYLLE
Trigger: TTCGAGAAGATAACAACACCAACAGGCTGAGAGAGT...GCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGATCTACGCTGTGTGCAAGGGGTaGCGGCCGCCTTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KHISCTGIDSHGEGTKIYAVCKG*RPPWLE
Trigger: CTCCAGCCAAGGCGGCCGCCACCCCTTGCACACAGC...GTAGATCTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CCA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTACATAAATAAATATTaGGCTGTTTCCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGYINKY*AVSLFL
Trigger: CAGGAAGAGGGAAACAGCCCAATATTTATTTATGTA...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGTATAGTACTCATTGCTaGAACAATTGTCACGATAGC +
Preference number: 4 (lower is better)
Translates to: DRRQRDGTRDSASYHGMGYSTHC*NNCHDS
Trigger: GCTATCGTGACAATTGTTTCAGCAATGAGTACTATA...CCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGTATAGTACTCATTGCTaGAACAATTGTCACGATAGC +
Preference number: 4 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEYSTHC*NNCHDS
Trigger: GCTATCGTGACAATTGTTTCAGCAATGAGTACTATA...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACTATAGTACTCATTGCTaGAACAATTGTCACGATAGC +
Preference number: 4 (lower is better)
Translates to: KPEGTEVARGLVVDTERDYSTHC*NNCHDS
Trigger: GCTATCGTGACAATTGTTTCAGCAATGAGTACTATA...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGTCAATAAAGGGAGAATaGATAATGGGGCTCCCACCC +
Preference number: 4 (lower is better)
Translates to: CCGRPYSMTTEATQPNLRSIKGE*IMGLPP
Trigger: GGGTGGGAGCCCCATTATTCATTCTCCCTTTATTGA...CCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGTGCCAAGACTTTTTCTaGCAGCATATCTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: EAWWSTQNGTDGSEMELECQDFF*QHILFV
Trigger: AACAAACAAGATATGCTGGCAGAAAAAGTCTTGGCA...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCAGGAGCCGGTGCGTCTaGTGCAGGTCGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSRSRCV*CRSRFW
Trigger: CCAGAAGCGCGACCTGCAGCAGACGCACCGGCTCCT...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CCA 90 bp GCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGTGGTCAAAGAATTCCTaGGAATATTCAAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: APTRRDSAAVSAMRVGGLWSKNS*EYSKSV
Trigger: CACTGACTTTGAATATTCCCAGGAATTCTTTGACCA...CAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTTGGTCAAAGAATTCCTaGGAATATTCAAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: HPERFCCSVGNESRWFGGWSKNS*EYSKSV
Trigger: CACTGACTTTGAATATTCCCAGGAATTCTTTGACCA...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGATTTACTTTGTCCACTTaGAATCGTGTCTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: PEGTEVARGLVVDTERDRFTLST*NRVSKI
Trigger: GATTTTTGAGACACGATTCCAAGTGGACAAAGTAAA...TCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGCCAACATCAAACATGTaGAAGTTTACTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEPTSNM*KFTLST
Trigger: AGTGGACAAAGTAAACTTCCACATGTTTGATGTTGG...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACCCAACATCAAACATGTaGAAGTTTACTTTGTCCACT +
Preference number: 4 (lower is better)
Translates to: KPEGTEVARGLVVDTERDPTSNM*KFTLST
Trigger: AGTGGACAAAGTAAACTTCCACATGTTTGATGTTGG...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp TGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTCTTCCTGTGAAGTaGTTCTCAAATTCCTATGTA +
Preference number: 4 (lower is better)
Translates to: WSTQNGTDGSEMELETLPPLPVK*FSNSYV
Trigger: TACATAGGAATTTGAGAACCACTTCACAGGAAGAGG...AGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp CAATACAAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGCCCCCAGGAAGGGCCTaGTGGCCCCAGCACACACTT +
Preference number: 4 (lower is better)
Translates to: QYKHISCTGIDSHGEGTKPPGRA*WPQHTL
Trigger: AAGTGTGTGCTGGGGCCACCAGGCCCTTCCTGGGGG...CTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTTGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCCCACTCAGGCACACTTaGGCCTTACTTGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VFNDNRSYTTKPEGTEVAPLRHT*ALLVSP
Trigger: AGGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGG...GGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGAGTCTGGCTGTTGTTTaGATTAAACTCTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMSLAVV*IKLLNR
Trigger: CCTGTTTAAGAGTTTAATTCAAACAACAGCCAGACT...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCATCCCCCACTATATTTaGTGGGAACCCAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VFNDNRSYTTKPEGTEVAIPHYI*WEPSEP
Trigger: TGGCTCACTGGGTTCCCATCAAATATAGTGGGGGAT...GGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GCATCTGTACAGTATGTAAATGCTATTAATGTCGTCACTCACATGCACGACAGTCAAACACCCCATGCCTaGCCGCTGGGATGGACGTCA +
Preference number: 4 (lower is better)
Translates to: ASVQYVNAINVVTHMHDSQTPHA*PLGWTS
Trigger: TGACGTCCATCCCAGCGGGCAGGCATGGGGTGTTTG...ACTGTCGTGCATGTGAGTGACGACATTAATAGCATTTACATACTGTACAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS-3UTR GCA 90 bp ATTCAAATGCCTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTCGTAGCTCCATACACTaGCCCTTGCCAAACACCCTT +
Preference number: 4 (lower is better)
Translates to: IQMPEASSDSECDCKRVSRSSIH*PLPNTL
Trigger: AAGGGTGTTTGGCAAGGGGCAGTGTATGGAGCTACG...AGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAGGCATTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp TGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTTGGTCAAAGAATTCCTaGGAATATTCAAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: WSTQNGTDGSEMELETLPWSKNS*EYSKSV
Trigger: CACTGACTTTGAATATTCCCAGGAATTCTTTGACCA...AGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp AAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGATCTACCGTGGCTCAGGGCACTaGACGAACGCTCTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: KHISCTGIDSHGEGTKIYRGSGH*TNALAV
Trigger: GACTGCAAGAGCGTTCGTGCAGTGCCCTGAGCCACG...GTAGATCTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAATCTTCTCCTGCATCTaGTGTTGCGTCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AVFNDNRSYTTKPEGTEVIFSCI*CCVFRN
Trigger: GTTCCTGAAGACGCAACACCAGATGCAGGAGAAGAT...TACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp ATTCAAATGCCTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTCCCATGGAGACGACCTaGACACATGTATTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: IQMPEASSDSECDCKRVSPMETT*THVFLG
Trigger: CCCTAGAAATACATGTGTCCAGGTCGTCTCCATGGG...AGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAGGCATTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCATCTGTACAGTATGTAAATGCTATTAATGTCGTCACTCACATGCACGACAGTTCAGAACTCTGCATCTaGGGAGGTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASVQYVNAINVVTHMHDSSELCI*GGPGLW
Trigger: CCACAGACCAGGACCTCCTCAGATGCAGAGTTCTGA...ACTGTCGTGCATGTGAGTGACGACATTAATAGCATTTACATACTGTACAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCTGTCCACGGCGCAGGTaGAGTGCGGGTAGCAGTAAT +
Preference number: 4 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSCPRRR*SAGSSN
Trigger: ATTACTGCTACCCGCACTTCACCTGCGCCGTGGACA...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCGGTTGCAACAGCTTGTaGTGTTGGTACATTGTCGAT +
Preference number: 4 (lower is better)
Translates to: VFNDNRSYTTKPEGTEVAGCNSL*CWYIVD
Trigger: ATCGACAATGTACCAACATCACAAGCTGTTGCAACC...GGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGTTTGCTTACTTGTATaGCGTAGCCTGTGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: AVFNDNRSYTTKPEGTEVVCLLV*RSLCPK
Trigger: CTTTGGACACAGGCTACGTCATACAAGTAAGCAAAC...TACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp GCATCTGTACAGTATGTAAATGCTATTAATGTCGTCACTCACATGCACGACAGTCCTGCATCCAGCTCATaGTGCTGGTACGACAGGTTC +
Preference number: 4 (lower is better)
Translates to: ASVQYVNAINVVTHMHDSPASSS*CWYDRF
Trigger: GAACCTGTCGTACCAGCATCATGAGCTGGATGCAGG...ACTGTCGTGCATGTGAGTGACGACATTAATAGCATTTACATACTGTACAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp GTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCCCCAGAGGGTCATTTTaGATTTTCTGCTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: VFNDNRSYTTKPEGTEVAPRGSF*IFCCVQ
Trigger: TTGCACACAGCAGAAAATGCAAAATGACCCTCTGGG...GGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR TCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCTCAGAACTCTGCATCTaGGGAGGTCCTGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSSELCI*GGPGLW
Trigger: CCACAGACCAGGACCTCCTCAGATGCAGAGTTCTGA...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCAGTCTGGCTGTTGTTTaGATTAAACTCTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSSLAVV*IKLLNR
Trigger: CCTGTTTAAGAGTTTAATTCAAACAACAGCCAGACT...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTACCGGAGAGATTCTGCTaGAGTGTCGGCAATGAGAGT +
Preference number: 4 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLPERFC*SVGNES
Trigger: ACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGG...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp GGTGGGATGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAAAAGTGGAATGGGATATaGCTTTTGGTACCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: GGMLREAVFNDNRSYTTKKWNGI*LLVPEN
Trigger: ATTTTCAGGTACCAAAAGCCATATCCCATTCCACTT...TTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCATCCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGATCTACAGGGCACCGTCCAGGTaGACTTTATCCTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KHISCTGIDSHGEGTKIYRAPSR*TLSFRE
Trigger: CTCCCTGAAGGATAAAGTCCACCTGGACGGTGCCCT...GTAGATCTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp ATTCAAATGCCTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTCTTTTCTTTCTGGTTTaGACTTGCTCGGAAAGCGTA +
Preference number: 4 (lower is better)
Translates to: IQMPEASSDSECDCKRVSLFFLV*TCSESV
Trigger: TACGCTTTCCGAGCAAGTTCAAACCAGAAAGAAAAG...AGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAGGCATTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGAGTACAGATGTGATGTaGAGAACATATTGTTTTCGT +
Preference number: 4 (lower is better)
Translates to: LRPAATLNVTVKGFLVTLSTDVM*RTYCFR
Trigger: ACGAAAACAATATGTTCTGCACATCACATCTGTACT...CAGAGTGACCAGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp CAATACAAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGTACACCCTCTCCAAGTaGTACCTCCCACGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: QYKHISCTGIDSHGEGTKYTLSK*YLPRED
Trigger: ATCCTCACGTGGGAGGTAGCACTTGGAGAGGGTGTA...CTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTTGTATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTACCTGGAACTCCACGGTaGCTCTCTGAATCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLPGTPR*LSESLL
Trigger: TAACAGAGATTCAGAGAGGCACCGTGGAGTTCCAGG...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp TGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGTTTACTTTGTCCACTTaGAATCGTGTCTCAAAAATC +
Preference number: 4 (lower is better)
Translates to: CCGRPYSMTTEATQPNLRFTLST*NRVSKI
Trigger: GATTTTTGAGACACGATTCCAAGTGGACAAAGTAAA...CCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTATACAGGCCGTCTCTCTaGACAGCACAGAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLYRPSL*TAQKFS
Trigger: TGAGAATTTCTGTGCTGTGCAGAGAGACGGCCTGTA...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTAACTTCCCTTTCTTGCTaGGGGTGCAGCTTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLTSLSC*GCSFSV
Trigger: AACTGAAAAGCTGCACCCCCAGCAAGAAAGGGAAGT...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp AAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGATCTACGGAGGCCGTATTCAATaGCAACAGAAGCTACACAAC +
Preference number: 4 (lower is better)
Translates to: KHISCTGIDSHGEGTKIYGGRIQ*QQKLHN
Trigger: GTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCC...GTAGATCTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR GCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCTACAGGCCGTCTCTCTaGACAGCACAGAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSYRPSL*TAQKFS
Trigger: TGAGAATTTCTGTGCTGTGCAGAGAGACGGCCTGTA...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCGGTTGCAACAGCTTGTaGTGTTGGTACATTGTCGAT +
Preference number: 4 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSGCNSL*CWYIVD
Trigger: ATCGACAATGTACCAACATCACAAGCTGTTGCAACC...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTAATGTGTGTGTTGCACTaGCTGTCTATAAAGTTATCC +
Preference number: 4 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLMCVLH*LSIKLS
Trigger: GGATAACTTTATAGACAGTCAGTGCAACACACACAT...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR TCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCTTTGTACCCCTGAATTaGGTTCAGGTTTTTACAGCT +
Preference number: 4 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSFVPLN*VQVFTA
Trigger: AGCTGTAAAAACCTGAACTCAATTCAGGGGTACAAA...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCAAGTGGAATGGGATATaGCTTTTGGTACCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSKWNGI*LLVPEN
Trigger: ATTTTCAGGTACCAAAAGCCATATCCCATTCCACTT...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CCA 90 bp AAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGATCTACTACATAAATAAATATTaGGCTGTTTCCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KHISCTGIDSHGEGTKIYYINKY*AVSLFL
Trigger: CAGGAAGAGGGAAACAGCCCAATATTTATTTATGTA...GTAGATCTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS GCA 90 bp GCGCCCAGTTCAGGCCGGCGCCTCAGCGGAGGGGCGGGAGGGGGCTaGACCCGGACCCTGTTCGGCGCTGCCGGCCGCCAGCTGCGGGAA +
Preference number: 5 (lower is better)
Translates to: APSSGRRLSGGAGGG*TRTLFGAAGRQLRE
Trigger: TTCCCGCAGCTGGCGGCCGGCAGCGCCGAACAGGGTCCGGGTGCAGCCCCCTCCCGCCCCTCCGCTGAGGCGCCGGCCTGAACTGGGCGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CAA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCGGCCGCCTGGCTCTCTaGCACCCCGAGCCGGGAAAG +
Preference number: 5 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSGRLAL*HPEPGK
Trigger: CTTTCCCGGCTCGGGGTGCAAGAGAGCCAGGCGGCC...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS GCA 90 bp CTGCGCCGCGGCCGCCTGGCTCTCTTGCACCCCGAGCCGGGAAAGTaGGTCTGGGCGCGCGCCCCGTGTTGGCTCGGACGCGTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: LRRGRLALLHPEPGK*VWARAPCWLGRVPA
Trigger: AGCAGGGACGCGTCCGAGCCAACACGGGGCGCGCGCCCAGACGCACTTTCCCGGCTCGGGGTGCAAGAGAGCCAGGCGGCCGCGGCGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS CCA 90 bp CGCGGCCGCCTGGCTCTCTTGCACCCCGAGCCGGGAAAGTGCGTCTaGGCGCGCGCCCCGTGTTGGCTCGGACGCGTCCCTGCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: RGRLALLHPEPGKCV*ARAPCWLGRVPAPG
Trigger: GCCAGGAGCAGGGACGCGTCCGAGCCAACACGGGGCGCGCGCCCAGACGCACTTTCCCGGCTCGGGGTGCAAGAGAGCCAGGCGGCCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS GCA 90 bp GCGCTGCCGCTTCTCCTTCGGCTTGTCTGCTTTGGGCCGAGCGCATaGCGGGCTCCCTTCGCCGCCCCGAGGGAGCAGGGTCCGGGCCGT +
Preference number: 5 (lower is better)
Translates to: ALPLLLRLVCFGPSA*RAPFAAPREQGPGR
Trigger: ACGGCCCGGACCCTGCTCCCTCGGGGCGGCGAAGGGAGCCCGGCATGCGCTCGGCCCAAAGCAGACAAGCCGAAGGAGAAGCGGCAGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS CCA 90 bp TTGCACCCCGAGCCGGGAAAGTGCGTCTGGGCGCGCGCCCCGTGTTaGCTCGGACGCGTCCCTGCTCCTGGCGGGCGAAGACTCGCGGAG +
Preference number: 5 (lower is better)
Translates to: LHPEPGKCVWARAPC*LGRVPAPGGRRLAE
Trigger: CTCCGCGAGTCTTCGCCCGCCAGGAGCAGGGACGCGTCCGAGCCAACACGGGGCGCGCGCCCAGACGCACTTTCCCGGCTCGGGGTGCAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS TCA 90 bp CGCGCAGCATGCGGTCGATGCCCCGGCTCACTTTCCTCGCCTCCTTaGCCGCCTCGCGCTCCTTGGCCGCCTCGCGCTCCTCGGCACTCA +
Preference number: 5 (lower is better)
Translates to: RAACGRCPGSLSSPP*PPRAPWPPRAPRHS
Trigger: TGAGTGCCGAGGAGCGCGAGGCGGCCAAGGAGCGCGAGGCGGTCAAGGAGGCGAGGAAAGTGAGCCGGGGCATCGACCGCATGCTGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS GCA 90 bp CGCGCTCCTTGGCCGCCTCGCGCTCCTCGGCACTCAGCTGCTCGGTaGGCTGCCGCTTCTCCTTCGGCTTGTCTGCTTTGGGCCGAGCGC +
Preference number: 5 (lower is better)
Translates to: RAPWPPRAPRHSAAR*AAASPSACLLWAER
Trigger: GCGCTCGGCCCAAAGCAGACAAGCCGAAGGAGAAGCGGCAGCGCACCGAGCAGCTGAGTGCCGAGGAGCGCGAGGCGGCCAAGGAGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS CCA 90 bp GCCCCGAGCAGCAGGAGCCGGTGCGTCTGCTGCAGGTCGCGCTTCTaGTCGCGCAGCATGCGGTCGATGCCCCGGCTCACTTTCCTCGCC +
Preference number: 5 (lower is better)
Translates to: APSSRSRCVCCRSRF*SRSMRSMPRLTFLA
Trigger: GGCGAGGAAAGTGAGCCGGGGCATCGACCGCATGCTGCGCGACCAGAAGCGCGACCTGCAGCAGACGCACCGGCTCCTGCTGCTCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CAA 90 bp AGAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCGCTGGGCAGGTGGCCTaGGCTGTCAGCCAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RAVTGPGTEAASQGPLSPAGQVA*AVSQWW
Trigger: CCACCACTGGCTGACAGCCAAGGCCACCTGCCCAGC...GGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS GCA 90 bp TCCTTGGCCGCCTCGCGCTCCTCGGCACTCAGCTGCTCGGTGCGCTaGCGCTTCTCCTTCGGCTTGTCTGCTTTGGGCCGAGCGCATGCC +
Preference number: 5 (lower is better)
Translates to: SLAASRSSALSCSVR*RFSFGLSALGRAHA
Trigger: GGCATGCGCTCGGCCCAAAGCAGACAAGCCGAAGGAGAAGCGGCAGCGCACCGAGCAGCTGAGTGCCGAGGAGCGCGAGGCGGCCAAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS-3UTR CAA 90 bp GCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGAAGAGCTCATACTGCTaGAGGTGCATCCGCTGGATG +
Preference number: 5 (lower is better)
Translates to: AWGWQSGSPGRRSVAGWRKSSYC*RCIRWM
Trigger: CATCCAGCGGATGCACCTCAAGCAGTATGAGCTCTT...CCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGATGAGAGTCGGTGGTTaGGGGGTGGGATGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: DSASYHGMGLAVRQSGAPMRVGG*GVGCCG
Trigger: CCCGCAGCATCCCACCCCCAAACCACCGACTCTCAT...CGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS GCA 90 bp CCTCTAGATGCTCCCGAAGTACCGAGCAGCAGGAGCCGGTGCGTCTaGTGCAGGTCGCGCTTCTGGTCGCGCAGCATGCGGTCGATGCCC +
Preference number: 5 (lower is better)
Translates to: PLDAPEVPSSRSRCV*CRSRFWSRSMRSMP
Trigger: GGGCATCGACCGCATGCTGCGCGACCAGAAGCGCGACCTGCAGCAGACGCACCGGCTCCTGCTGCTCGGTACTTCGGGAGCATCTAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585590.1
CDS CCA 90 bp TGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTaGCGGCAGCATCCTCACAAGAGCTCATACTGCTTGAGGTGCATC +
Preference number: 5 (lower is better)
Translates to: WGWQSGSPGRRSVAG*RQHPHKSSYCLRCI
Trigger: GATGCACCTCAAGCAGTATGAGCTCTTGTGAGGATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS CCA 90 bp CCCTGGACGGAAGCCCTTCAGCACCCGCGGCTGGGCAGGTGGCCTTaGCTGTCAGCCAGTGGTGGTGCTTCTCCTTGGTGCTCCGTCTTC +
Preference number: 5 (lower is better)
Translates to: PWTEALQHPRLGRWP*LSASGGASPWCSVF
Trigger: GAAGACGGAGCACCAAGGAGAAGCACCACCACTGGCTGACAGCCAAGGCCACCTGCCCAGCCGCGGGTGCTGAAGGGCTTCCGTCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CAA 90 bp ACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGAATTGGTTTTCAGGGTaGGCCAGCGGAACTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TMAWGWQSGSPGRRSVAGNWFSG*ASGTGG
Trigger: ACCTCCAGTTCCGCTGGCCAACCCTGAAAACCAATT...CCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCGTCCGTAACCACCTGTaGTTCCAGATGCTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSVRNHL*FQMLSK
Trigger: TTTTGAAAGCATCTGGAACAACAGGTGGTTACGGAC...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCAATTGGTTTTCAGGGTaGGCCAGCGGAACTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PPTMAWGWQSGSPGRRSVNWFSG*ASGTGG
Trigger: ACCTCCAGTTCCGCTGGCCAACCCTGAAAACCAATT...GACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAGAAGGCTGGGCCCCCTaGGTCTCAGGTGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VARGLVVDTERDRRQRDGEGWAP*VSGEEG
Trigger: GCCCTCCTCACCTGAGACCAAGGGGGCCCAGCCTTC...TCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGAAGGCTGGGCCCCCTaGGTCTCAGGTGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: RQRDGTRDSASYHGMGLAEGWAP*VSGEEG
Trigger: GCCCTCCTCACCTGAGACCAAGGGGGCCCAGCCTTC...TGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp AGAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTGGTGGTGCTTCTCCTaGGTGCTCCGTCTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: RAVTGPGTEAASQGPLSPWWCFS*VLRLQE
Trigger: TTCCTGAAGACGGAGCACCAAGGAGAAGCACCACCA...GGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CAA 90 bp GAGCAGTCACTGGGCCTGGCACCGAGGCAGCAAGCCAGGGTCCCCTCAGCCCCTGAGTTGACGTTGGAGTaGATGGTGGTCCCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: EQSLGLAPRQQARVPSAPELTLE*MVVPGF
Trigger: GAAGCCTGGGACCACCATCAACTCCAACGTCAACTC...AGGGGCTGAGGGGACCCTGGCTTGCTGCCTCGGTGCCAGGCCCAGTGACTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CAA 90 bp GCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGTCCGTCGTCTTGCTGTaGCCGCCCAAACACCCCATG +
Preference number: 5 (lower is better)
Translates to: AAVSAMRVGGLGVGCCGRSVVLL*PPKHPM
Trigger: CATGGGGTGTTTGGGCGGCAACAGCAAGACGACGGA...CCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CAA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCTCTTTCCAGGAAGTATaGTGCACAGTCAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSISFQEV*CTVNQL
Trigger: CAGCTGATTGACTGTGCACAATACTTCCTGGAAAGA...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCATGCACGACAGTCCTaGTTCCCCCAGGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: LETLPPTMAWGWQSGSPGHARQS*FPQEGP
Trigger: AGGCCCTTCCTGGGGGAACAAGGACTGTCGTGCATG...CCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS GCA 90 bp CGCCCTGGTCTTCCGTCGTCTTGCTGTTGCCGCCCAAACACCCCATaGCTGCCCGCTGGGATGGACGTCAGGAAGTTAGGAATGTGCGCA +
Preference number: 5 (lower is better)
Translates to: RPGLPSSCCCRPNTP*LPAGMDVRKLGMCA
Trigger: TGCGCACATTCCTAACTTCCTGACGTCCATCCCAGCGGGCAGGCATGGGGTGTTTGGGCGGCAACAGCAAGACGACGGAAGACCAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000423027.8
ENST00000535121.5
CDS-3UTR CAA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCGTTTACTTTGTCCACTaGGAATCGTGTCTCAAAAAT +
Preference number: 5 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSVYFVH*ESCLKN
Trigger: ATTTTTGAGACACGATTCCAAGTGGACAAAGTAAAC...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCCCCAGAGGGTCATTTaGCATTTTCTGCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: DSASYHGMGLAVRQSGAPPQRVI*HFLLCA
Trigger: TGCACACAGCAGAAAATGCAAAATGACCCTCTGGGG...CGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CAA 90 bp GCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGTTCGGCTTGTCTGCTTaGGGCCGAGCGCATGCCGGG +
Preference number: 5 (lower is better)
Translates to: APTRRDSAAVSAMRVGGLFGLSA*GRAHAG
Trigger: CCCGGCATGCGCTCGGCCCAAAGCAGACAAGCCGAA...CAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CAA 90 bp GGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCGAATATGAAGCATCATaGCTACACCAGTTCTTACTT +
Preference number: 5 (lower is better)
Translates to: GAGSQAVRGAAPSQGGGSEYEAS*LHQFLL
Trigger: AAGTAAGAACTGGTGTAGCAATGATGCTTCATATTC...GCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTATGTGGAAGTTTACTTaGTCCACTTGGAATCGTGTC +
Preference number: 5 (lower is better)
Translates to: PWHGAGSQAVRGAAPSQGMWKFT*STWNRV
Trigger: GACACGATTCCAAGTGGACAAAGTAAACTTCCACAT...ACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCAGCCTGTTGGTGTaGTTATCTTCTCGAATCACC +
Preference number: 5 (lower is better)
Translates to: DSASYHGMGLAVRQSGAPLSLLV*LSSRIT
Trigger: GGTGATTCGAGAAGATAACAACACCAACAGGCTGAG...CGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGAGAGGTAGCCAGAGGCTaGGTGGTCGACACAGAACGG +
Preference number: 5 (lower is better)
Translates to: PEGTEVARGLVVDTERDREVARG*VVDTER
Trigger: CCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTC...TCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACATGAGAGTCGGTGGTTaGGGGGTGGGATGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: KPEGTEVARGLVVDTERDMRVGG*GVGCCG
Trigger: CCCGCAGCATCCCACCCCCAAACCACCGACTCTCAT...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGACATGCACGACAGTCCTaGTTCCCCCAGGAAGGGCCT +
Preference number: 5 (lower is better)
Translates to: VARGLVVDTERDRRQRDGHARQS*FPQEGP
Trigger: AGGCCCTTCCTGGGGGAACAAGGACTGTCGTGCATG...TCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCCTTTCTGGTTTGAACTaGCTCGGAAAGCGTAAGACA +
Preference number: 5 (lower is better)
Translates to: PPTMAWGWQSGSPGRRSVLSGLN*LGKRKT
Trigger: TGTCTTACGCTTTCCGAGCAAGTTCAAACCAGAAAG...GACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS CCA 90 bp CCTTCAGCACCCGCGGCTGGGCAGGTGGCCTTGGCTGTCAGCCAGTaGTGGTGCTTCTCCTTGGTGCTCCGTCTTCAGGAACAGTATAAT +
Preference number: 5 (lower is better)
Translates to: PSAPAAGQVALAVSQ*WCFSLVLRLQEQYN
Trigger: ATTATACTGTTCCTGAAGACGGAGCACCAAGGAGAAGCACCACCACTGGCTGACAGCCAAGGCCACCTGCCCAGCCGCGGGTGCTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS-3UTR CAA 90 bp GCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGAAAAGCAATAGAGAGTaGGAGACGTGTGCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: AVSAMRVGGLGVGCCGRPKSNRE*ETCAAP
Trigger: AGGAGCCGCACACGTCTCCAACTCTCTATTGCTTTT...CGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CAA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCGCCAGCATATCTTGTTaGTTCAAGAACAAGATGATA +
Preference number: 5 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSIASISC*FKNKMI
Trigger: TATCATCTTGTTCTTGAACAAACAAGATATGCTGGC...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCTGGCAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTGGCGGCAGCATCTTCTGCCAGCATATCTaGTTTGTTCAAGAACAAGAT +
Preference number: 5 (lower is better)
Translates to: AGSQAVRGAAPSQGGGSIFCQHI*FVQEQD
Trigger: ATCTTGTTCTTGAACAAACAAGATATGCTGGCAGAA...GATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGGAGGTAGCCAGAGGCTaGGTGGTCGACACAGAACGG +
Preference number: 5 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEEVARG*VVDTER
Trigger: CCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTC...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGTGGTCTTCCGTCGTCTaGCTGTTGCCGCCCAAACAC +
Preference number: 5 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEWSSVV*LLPPKH
Trigger: GTGTTTGGGCGGCAACAGCAAGACGACGGAAGACCA...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CAA 90 bp GGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTTGGTCTTCCGTCGTCTaGCTGTTGCCGCCCAAACAC +
Preference number: 5 (lower is better)
Translates to: GSHPERFCCSVGNESRWFWSSVV*LLPPKH
Trigger: GTGTTTGGGCGGCAACAGCAAGACGACGGAAGACCA...AAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CAA 90 bp ACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTTGGCTGGAGATCACTaGCTAACGCCCAGAGCGGAC +
Preference number: 5 (lower is better)
Translates to: TDGSEMELETLPPTMAWGLAGDH*LTPRAD
Trigger: GTCCGCTCTGGGCGTTAGCAAGTGATCTCCAGCCAA...GCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CAA 90 bp CCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGAACACTTGGGCCTTACTaGTCTCTCCTGCTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PEGTEVARGLVVDTERDRTLGPY*SLLLEP
Trigger: AGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGT...TCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS GCA 90 bp ACCCCATGCCTGCCCGCTGGGATGGACGTCAGGAAGTTAGGAATGTaGGCAAAAAGCAATAGAGAGTTGGAGACGTGTGCGGCTCCTGCG +
Preference number: 5 (lower is better)
Translates to: TPCLPAGMDVRKLGM*AKSNRELETCAAPA
Trigger: CGCAGGAGCCGCACACGTCTCCAACTCTCTATTGCTTTTTGCGCACATTCCTAACTTCCTGACGTCCATCCCAGCGGGCAGGCATGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000423027.8
ENST00000535121.5
CDS-3UTR CAA 90 bp GTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAAAGAGCTCATACTGCTaGAGGTGCATCCGCTGGATG +
Preference number: 5 (lower is better)
Translates to: VARGLVVDTERDRRQRDGKSSYC*RCIRWM
Trigger: CATCCAGCGGATGCACCTCAAGCAGTATGAGCTCTT...TCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTTGGTCACTCTGTCGCTaGGGGTCGACTCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: HPERFCCSVGNESRWFGGWSLCR*GSTPSL
Trigger: AAGACTTGGAGTCGACCCCAAGCGACAGAGTGACCA...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGCCTTTTCTTTCTGGTTaGAACTTGCTCGGAAAGCGT +
Preference number: 5 (lower is better)
Translates to: AVSAMRVGGLGVGCCGRPPFLSG*NLLGKR
Trigger: ACGCTTTCCGAGCAAGTTCAAACCAGAAAGAAAAGG...CGGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS TCA 90 bp GGAGACGTGTGCGGCTCCTGCGACGGCTCCTCTCTTTCCTGCTGCTaGAAGAGATGGTCTGGTCTCTTCGGTGTTTTCCGATTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GDVCGSCDGSSLSCC*KRWSGLFGVFRFRA
Trigger: TGCTCTGAATCGGAAAACACCGAAGAGACCAGACCATCTCTTTCAGCAGCAGGAAAGAGAGGAGCCGTCGCAGGAGCCGCACACGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS-3UTR CAA 90 bp GACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGAATTGGTTTTCAGGGTaGGCCAGCGGAACTGGAGGT +
Preference number: 5 (lower is better)
Translates to: DRRQRDGTRDSASYHGMGNWFSG*ASGTGG
Trigger: ACCTCCAGTTCCGCTGGCCAACCCTGAAAACCAATT...CCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCAGGCAGTCCGGGGCGCCGGCCAGCATATCTTGTTaGTTCAAGAACAAGATGATA +
Preference number: 5 (lower is better)
Translates to: DSASYHGMGLAVRQSGAPASISC*FKNKMI
Trigger: TATCATCTTGTTCTTGAACAAACAAGATATGCTGGC...CGGCGCCCCGGACTGCCTGACTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGTCCCGGATAAAGAACTaGGCTCTTGTAACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: AAVSAMRVGGLGVGCCGRSRIKN*ALVTLG
Trigger: TCCCAAAGTTACAAGAGCCAAGTTCTTTATCCGGGA...CCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp AAACCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACACTGCACGAACGCTCTaGCAGTCACGGTTGATAACG +
Preference number: 5 (lower is better)
Translates to: KPEGTEVARGLVVDTERDTARTL*QSRLIT
Trigger: CGTTATCAACCGTGACTGCAAGAGCGTTCGTGCAGT...GTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGCATACTTCCCTTTCTaGCTGGGGGTGCAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: HPERFCCSVGNESRWFGGAYFPF*LGVQLF
Trigger: GAAAAGCTGCACCCCCAGCAAGAAAGGGAAGTATGC...ACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGGGCCCCAGCACACACTaGGGATTATGTGTATACATA +
Preference number: 5 (lower is better)
Translates to: GSQRLGGRHRTGQTAARWGPSTH*GLCVYI
Trigger: TATGTATACACATAATCCCAAGTGTGTGCTGGGGCC...CCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS TCA 90 bp GGCAGACCCACTGCGTCAGCATGTGCAGCTGAACCATGTCCCAGGTaGTCAGTGATTCATGGTGACTCGTCATCCAAGAGCGTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: GRPTASACAAEPCPR*SVIHGDSSSKSVFL
Trigger: GAGGAACACGCTCTTGGATGACGAGTCACCATGAATCACTGATCACCTGGGACATGGTTCAGCTGCACATGCTGACGCAGTGGGTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602628.1
CDS CCA 90 bp TGCTCCATGATTCTGGGGCTGACCTGTGTTTCTCCTGTGGCCTCCTaGCTAGCAGACTCCAAATCACGCCCTCTAGATGCTCCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: CSMILGLTCVSPVAS*LADSKSRPLDAPEV
Trigger: TACTTCGGGAGCATCTAGAGGGCGTGATTTGGAGTCTGCTAGCCAGGAGGCCACAGGAGAAACACAGGTCAGCCCCAGAATCATGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585590.1
CDS-3UTR CAA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGAAAAGCAATAGAGAGTaGGAGACGTGTGCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEKSNRE*ETCAAP
Trigger: AGGAGCCGCACACGTCTCCAACTCTCTATTGCTTTT...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CAA 90 bp GAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGTTCTCGATCTTTTTGTaGGCCTCGCGTCGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: EGTEVARGLVVDTERDRRFSIFL*ASRRSF
Trigger: AAAAGAACGACGCGAGGCCAACAAAAAGATCGAGAA...CCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269162.9
ENST00000423027.8
CDS-3UTR CAA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGATCAGCTGGTATTCGTaGGATCTCTCAAAGCATGCC +
Preference number: 5 (lower is better)
Translates to: GSEMELETLPPTMAWGWQISWYS*DLSKHA
Trigger: GGCATGCTTTGAGAGATCCAACGAATACCAGCTGAT...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAATCAGCTGGTATTCGTaGGATCTCTCAAAGCATGCC +
Preference number: 5 (lower is better)
Translates to: RQRDGTRDSASYHGMGLAISWYS*DLSKHA
Trigger: GGCATGCTTTGAGAGATCCAACGAATACCAGCTGAT...TGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp AGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGAGACTCTCTCAGCCTGTaGGTGTTGTTATCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: RGSQRLGGRHRTGQTAARDSLSL*VLLSSR
Trigger: TCGAGAAGATAACAACACCAACAGGCTGAGAGAGTC...TCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTCCCGGATAAAGAACTaGGCTCTTGTAACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGSRIKN*ALVTLG
Trigger: TCCCAAAGTTACAAGAGCCAAGTTCTTTATCCGGGA...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp TGGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTCCCGGATAAAGAACTaGGCTCTTGTAACTTTGGGA +
Preference number: 5 (lower is better)
Translates to: WGSHPERFCCSVGNESRWSRIKN*ALVTLG
Trigger: TCCCAAAGTTACAAGAGCCAAGTTCTTTATCCGGGA...CCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGGGGTGGCGGCCGCCTaGGCTGGAGATCACTTGCTA +
Preference number: 5 (lower is better)
Translates to: AVFNDNRSYTTKPEGTEVGVAAA*AGDHLL
Trigger: TAGCAAGTGATCTCCAGCCAAGGCGGCCGCCACCCC...TACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CAA 90 bp GGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGCCTGTGTCCAAAGTTTaGACTAAGGGAATGATGGAC +
Preference number: 5 (lower is better)
Translates to: GSQRLGGRHRTGQTAARWPVSKV*TKGMMD
Trigger: GTCCATCATTCCCTTAGTCAAAACTTTGGACACAGG...CCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCTTTCTGGTTTGAACTaGCTCGGAAAGCGTAAGACA +
Preference number: 5 (lower is better)
Translates to: EGTEVARGLVVDTERDRRLSGLN*LGKRKT
Trigger: TGTCTTACGCTTTCCGAGCAAGTTCAAACCAGAAAG...CCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS CCA 90 bp CTCCTGCGACGGCTCCTCTCTTTCCTGCTGCTGAAAGAGATGGTCTaGTCTCTTCGGTGTTTTCCGATTCAGAGCAGGCGTTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LLRRLLSFLLLKEMV*SLRCFPIQSRRFFS
Trigger: GGAGAAGAAACGCCTGCTCTGAATCGGAAAACACCGAAGAGACCAGACCATCTCTTTCAGCAGCAGGAAAGAGAGGAGCCGTCGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS-3UTR CAA 90 bp GAGGCTTGGTGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGATCAGCTGGTATTCGTaGGATCTCTCAAAGCATGCC +
Preference number: 5 (lower is better)
Translates to: EAWWSTQNGTDGSEMELEISWYS*DLSKHA
Trigger: GGCATGCTTTGAGAGATCCAACGAATACCAGCTGAT...CTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCACCAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAGTCTTTCCAGGAAGTATaGTGCACAGTCAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: GSEMELETLPPTMAWGWQSFQEV*CTVNQL
Trigger: CAGCTGATTGACTGTGCACAATACTTCCTGGAAAGA...CTGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCATGAGAGTCGGTGGTTaGGGGGTGGGATGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: VFNDNRSYTTKPEGTEVAMRVGG*GVGCCG
Trigger: CCCGCAGCATCCCACCCCCAAACCACCGACTCTCAT...GGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CCTGAGGGGACAGAGGTAGCCAGAGGCTTGGTGGTCGACACAGAACGGGACAGACCTGTGTCCAAAGTTTaGACTAAGGGAATGATGGAC +
Preference number: 5 (lower is better)
Translates to: PEGTEVARGLVVDTERDRPVSKV*TKGMMD
Trigger: GTCCATCATTCCCTTAGTCAAAACTTTGGACACAGG...TCTGTCCCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTCTGTCCCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCACCTTTTCTTTCTGGTTaGAACTTGCTCGGAAAGCGT +
Preference number: 5 (lower is better)
Translates to: RQRDGTRDSASYHGMGLAPFLSG*NLLGKR
Trigger: ACGCTTTCCGAGCAAGTTCAAACCAGAAAGAAAAGG...TGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS TCA 90 bp CCACTGCGTCAGCATGTGCAGCTGAACCATGTCCCAGGTGATCAGTaGTTCATGGTGACTCGTCATCCAAGAGCGTGTTCCTCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: PLRQHVQLNHVPGDQ*FMVTRHPRACSSWL
Trigger: AAGCCAAGAGGAACACGCTCTTGGATGACGAGTCACCATGAATCACTGATCACCTGGGACATGGTTCAGCTGCACATGCTGACGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602628.1
CDS-3UTR CAA 90 bp ACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTCTTTCCAGGAAGTATaGTGCACAGTCAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: TDGSEMELETLPPTMAWGSFQEV*CTVNQL
Trigger: CAGCTGATTGACTGTGCACAATACTTCCTGGAAAGA...GCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGGTTTACTTTGTCCACTaGGAATCGTGTCTCAAAAAT +
Preference number: 5 (lower is better)
Translates to: AAVSAMRVGGLGVGCCGRVYFVH*ESCLKN
Trigger: ATTTTTGAGACACGATTCCAAGTGGACAAAGTAAAC...CCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp ACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCGTCCGTAACCACCTGTaGTTCCAGATGCTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: TDGSEMELETLPPTMAWGVRNHL*FQMLSK
Trigger: TTTTGAAAGCATCTGGAACAACAGGTGGTTACGGAC...GCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGAGGTAGCCAGAGGCTaGGTGGTCGACACAGAACGG +
Preference number: 5 (lower is better)
Translates to: AVFNDNRSYTTKPEGTEVEVARG*VVDTER
Trigger: CCGTTCTGTGTCGACCACCAAGCCTCTGGCTACCTC...TACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp AGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCAGTAACAGCAGGTGGTaGCAACAGCTTGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: RDSAAVSAMRVGGLGVGCSNSRW*QQLVML
Trigger: CAACATCACAAGCTGTTGCAACCACCTGCTGTTACT...GCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGAGTAACAGCAGGTGGTaGCAACAGCTTGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMSNSRW*QQLVML
Trigger: CAACATCACAAGCTGTTGCAACCACCTGCTGTTACT...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp TGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGCTGCGGGAGGCCGAATATGAAGCATCATaGCTACACCAGTTCTTACTT +
Preference number: 5 (lower is better)
Translates to: CSVGNESRWFGGGMLREAEYEAS*LHQFLL
Trigger: AAGTAAGAACTGGTGTAGCAATGATGCTTCATATTC...GGCCTCCCGCAGCATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGGGCCCCAGCACACACTaGGGATTATGTGTATACATA +
Preference number: 5 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMGPSTH*GLCVYI
Trigger: TATGTATACACATAATCCCAAGTGTGTGCTGGGGCC...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GGGGCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTGTTTACTTTGTCCACTaGGAATCGTGTCTCAAAAAT +
Preference number: 5 (lower is better)
Translates to: GAPTRRDSAAVSAMRVGGVYFVH*ESCLKN
Trigger: ATTTTTGAGACACGATTCCAAGTGGACAAAGTAAAC...ACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCAAGAGCTCATACTGCTaGAGGTGCATCCGCTGGATG +
Preference number: 5 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSKSSYC*RCIRWM
Trigger: CATCCAGCGGATGCACCTCAAGCAGTATGAGCTCTT...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGAAGCAGCAGGTAATGTaGACATTAAGCTCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: APTRRDSAAVSAMRVGGLKQQVM*TLSSSA
Trigger: TGCTGAAGAGCTTAATGTCAACATTACCTGCTGCTT...CAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCTCCCACCCGGAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGTTACTGTTTGCTTACTaGTATGACGTAGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: APTRRDSAAVSAMRVGGLLLFAY*YDVACV
Trigger: GACACAGGCTACGTCATACAAGTAAGCAAACAGTAA...CAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTCCGGGTGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGATGTGGAAGTTTACTTaGTCCACTTGGAATCGTGTC +
Preference number: 5 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMMWKFT*STWNRV
Trigger: GACACGATTCCAAGTGGACAAAGTAAACTTCCACAT...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp TGGTCGACACAGAACGGGACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTATGTGGAAGTTTACTTaGTCCACTTGGAATCGTGTC +
Preference number: 5 (lower is better)
Translates to: WSTQNGTDGSEMELETLPMWKFT*STWNRV
Trigger: GACACGATTCCAAGTGGACAAAGTAAACTTCCACAT...AGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTCCCGTTCTGTGTCGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCATTCTGCCAGCATATCTaGTTTGTTCAAGAACAAGAT +
Preference number: 5 (lower is better)
Translates to: RQRDGTRDSASYHGMGLAFCQHI*FVQEQD
Trigger: ATCTTGTTCTTGAACAAACAAGATATGCTGGCAGAA...TGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCCTGAAAAGATTAGATaGCAATTTGTACCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: DGSEMELETLPPTMAWGWPEKIR*QFVPLN
Trigger: ATTCAGGGGTACAAATTGCAATCTAATCTTTTCAGG...CCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCAAGTCTTGTGGACCTGTTCCCACTaGGGGAACTTGAAGAAGTGT +
Preference number: 5 (lower is better)
Translates to: DCKRVSGHSVAWGRLQVLWTCSH*GNLKKC
Trigger: ACACTTCTTCAAGTTCCCCAAGTGGGAACAGGTCCA...CAAGACTTGGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCTGGACCTGTTCCCACTaGGGGAACTTGAAGAAGTGT +
Preference number: 5 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSWTCSH*GNLKKC
Trigger: ACACTTCTTCAAGTTCCCCAAGTGGGAACAGGTCCA...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GAGAGATTCTGCTGCAGTGTCGGCAATGAGAGTCGGTGGTTTGGGGGTGGGATGTTACTGTTTGCTTACTaGTATGACGTAGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: ERFCCSVGNESRWFGGGMLLFAY*YDVACV
Trigger: GACACAGGCTACGTCATACAAGTAAGCAAACAGTAA...CATCCCACCCCCAAACCACCGACTCTCATTGCCGACACTGCAGCAGAATCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGCTGGCAAATGGGATATGGCTTTaGGTACCTGAAAATAAATGC +
Preference number: 5 (lower is better)
Translates to: RQRDGTRDSASYHGMGLANGIWL*VPENKC
Trigger: GCATTTATTTTCAGGTACCAAAAGCCATATCCCATT...TGCCAGCCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp TGCTGCGGGAGGCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGACTCTCTCAGCCTGTaGGTGTTGTTATCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: CCGRPYSMTTEATQPNLRDSLSL*VLLSSR
Trigger: TCGAGAAGATAACAACACCAACAGGCTGAGAGAGTC...CCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGCCTCCCGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCATCTGTACAGTATGTAAATGCTATTAATGTCGTCACTCACATGCACGACAGTCGCTTCTCCTTCGGCTaGTCTGCTTTGGGCCGAGCG +
Preference number: 5 (lower is better)
Translates to: ASVQYVNAINVVTHMHDSRFSFG*SALGRA
Trigger: CGCTCGGCCCAAAGCAGACAAGCCGAAGGAGAAGCG...ACTGTCGTGCATGTGAGTGACGACATTAATAGCATTTACATACTGTACAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334049.11
CDS-3UTR CAA 90 bp GACAGACGGCAGCGAGATGGAACTAGAGACTCTGCCTCCTACCATGGCATGGGGTGCAGCTTTTGCAGGTaGATAAAAGATGTTTCACTT +
Preference number: 5 (lower is better)
Translates to: DRRQRDGTRDSASYHGMGCSFCR*IKDVSL
Trigger: AAGTGAAACATCTTTTATCAACCTGCAAAAGCTGCA...CCCCATGCCATGGTAGGAGGCAGAGTCTCTAGTTCCATCTCGCTGCCGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGTCGCTTGGGGTCGACTCCTTCTCGATCTTTTTGTaGGCCTCGCGTCGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LNVTVKGFLVTLSLGVDSFSIFL*ASRRSF
Trigger: AAAAGAACGACGCGAGGCCAACAAAAAGATCGAGAA...GGAGTCGACCCCAAGCGACAGAGTGACCAGAAACCCTTTTACAGTCACATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS-3UTR CAA 90 bp AAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGATCTACTCCGTCGTCTTGCTGTaGCCGCCCAAACACCCCATG +
Preference number: 5 (lower is better)
Translates to: KHISCTGIDSHGEGTKIYSVVLL*PPKHPM
Trigger: CATGGGGTGTTTGGGCGGCAACAGCAAGACGACGGA...GTAGATCTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS-3UTR CAA 90 bp GCCGTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGACTCTCTCAGCCTGTaGGTGTTGTTATCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: AVFNDNRSYTTKPEGTEVDSLSL*VLLSSR
Trigger: TCGAGAAGATAACAACACCAACAGGCTGAGAGAGTC...TACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCGTCCGTAACCACCTGTaGTTCCAGATGCTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: VFNDNRSYTTKPEGTEVAVRNHL*FQMLSK
Trigger: TTTTGAAAGCATCTGGAACAACAGGTGGTTACGGAC...GGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCTCCCACTTGGGGAACTaGAAGAAGTGTTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: VFNDNRSYTTKPEGTEVASHLGN*KKCFIS
Trigger: GCTAATGAAACACTTCTTCAAGTTCCCCAAGTGGGA...GGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTATCCACTCAGGCACACTaGGGCCTTACTTGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLSTQAH*GLTCLS
Trigger: GGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGA...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CAATACAAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGTGGTCACTCTGTCGCTaGGGGTCGACTCCAAGTCTT +
Preference number: 5 (lower is better)
Translates to: QYKHISCTGIDSHGEGTKWSLCR*GSTPSL
Trigger: AAGACTTGGAGTCGACCCCAAGCGACAGAGTGACCA...CTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTTGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTAGCATACTTCCCTTTCTaGCTGGGGGTGCAGCTTTTC +
Preference number: 5 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLAYFPF*LGVQLF
Trigger: GAAAAGCTGCACCCCCAGCAAGAAAGGGAAGTATGC...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CTGAGGCCAGCAGCGACTCTGAATGTGACTGTAAAAGGGTTTCTGGTCACTCTGAATGGGATATGGCTTTaGGTACCTGAAAATAAATGC +
Preference number: 5 (lower is better)
Translates to: LRPAATLNVTVKGFLVTLNGIWL*VPENKC
Trigger: GCATTTATTTTCAGGTACCAAAAGCCATATCCCATT...CAGAGTGACCAGAAACCCTTTTACAGTCACATTCAGAGTCGCTGCTGGCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CAATACAAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGACACTTGGGCCTTACTaGTCTCTCCTGCTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: QYKHISCTGIDSHGEGTKTLGPY*SLLLEP
Trigger: AGGCTCCAGCAGGAGAGACAAGTAAGGCCCAAGTGT...CTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTTGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCTCCACTCAGGCACACTaGGGCCTTACTTGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSSTQAH*GLTCLS
Trigger: GGAGAGACAAGTAAGGCCCAAGTGTGCCTGAGTGGA...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCACTGCACGAACGCTCTaGCAGTCACGGTTGATAACG +
Preference number: 5 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSTARTL*QSRLIT
Trigger: CGTTATCAACCGTGACTGCAAGAGCGTTCGTGCAGT...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GCATCTGTACAGTATGTAAATGCTATTAATGTCGTCACTCACATGCACGACAGTCTCAGCCTGTTGGTGTaGTTATCTTCTCGAATCACC +
Preference number: 5 (lower is better)
Translates to: ASVQYVNAINVVTHMHDSLSLLV*LSSRIT
Trigger: GGTGATTCGAGAAGATAACAACACCAACAGGCTGAG...ACTGTCGTGCATGTGAGTGACGACATTAATAGCATTTACATACTGTACAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTACTCAGCCTGTTGGTGTaGTTATCTTCTCGAATCACC +
Preference number: 5 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLLSLLV*LSSRIT
Trigger: GGTGATTCGAGAAGATAACAACACCAACAGGCTGAG...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp GTATTCAATGACAACAGAAGCTACACAACCAAACCTGAGGGGACAGAGGTAGCCTGCAGCTTTTGCAGGTaGATAAAAGATGTTTCACTT +
Preference number: 5 (lower is better)
Translates to: VFNDNRSYTTKPEGTEVACSFCR*IKDVSL
Trigger: AAGTGAAACATCTTTTATCAACCTGCAAAAGCTGCA...GGCTACCTCTGTCCCCTCAGGTTTGGTTGTGTAGCTTCTGTTGTCATTGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp TGTGTCATAATGTTTGAGGCTGTATTTGTAAGTCTTGCAAGTGTGAGAAAGAGCTCCCACTTGGGGAACTaGAAGAAGTGTTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: CVIMFEAVFVSLASVRKSSHLGN*KKCFIS
Trigger: GCTAATGAAACACTTCTTCAAGTTCCCCAAGTGGGA...GCTCTTTCTCACACTTGCAAGACTTACAAATACAGCCTCAAACATTATGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp AAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGATCTACAAGCAGCAGGTAATGTaGACATTAAGCTCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: KHISCTGIDSHGEGTKIYKQQVM*TLSSSA
Trigger: TGCTGAAGAGCTTAATGTCAACATTACCTGCTGCTT...GTAGATCTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTAGCCAGCATATCTTGTTaGTTCAAGAACAAGATGATA +
Preference number: 5 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLASISC*FKNKMI
Trigger: TATCATCTTGTTCTTGAACAAACAAGATATGCTGGC...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp ATGATGCTGGTACGACAGGTTCTTTTACTTCATAAAAAGGTGGAGGAAACCCTACCTGAAAAGATTAGATaGCAATTTGTACCCCTGAAT +
Preference number: 5 (lower is better)
Translates to: MMLVRQVLLLHKKVEETLPEKIR*QFVPLN
Trigger: ATTCAGGGGTACAAATTGCAATCTAATCTTTTCAGG...TAGGGTTTCCTCCACCTTTTTATGAAGTAAAAGAACCTGTCGTACCAGCATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS-3UTR CAA 90 bp CAATACAAACACATTTCATGTACAGGTATAGATAGCCATGGTGAAGGCACAAAGTTCTGCCAGCATATCTaGTTTGTTCAAGAACAAGAT +
Preference number: 5 (lower is better)
Translates to: QYKHISCTGIDSHGEGTKFCQHI*FVQEQD
Trigger: ATCTTGTTCTTGAACAAACAAGATATGCTGGCAGAA...CTTTGTGCCTTCACCATGGCTATCTATACCTGTACATGAAATGTGTTTGTATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000423027.8
CDS GCA 72 bp GGCCGCCTGGCTCTCTTGCACCCCGAGCCGGGAAAGTaGGTCTGGGCGCGCGCCCCGTGTTGGCTCGGACGC +
Preference number: 6 (lower is better)
Translates to: GRLALLHPEPGK*VWARAPCWLGR
Trigger: GCGTCCGAGCCAACACGGGGCGCGCGCCCAGACGCACTTTCCCGGCTCGGGGTGCAAGAGAGCCAGGCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS CCA 72 bp GAGCCGGGAAAGTGCGTCTGGGCGCGCGCCCCGTGTTaGCTCGGACGCGTCCCTGCTCCTGGCGGGCGAAGA +
Preference number: 6 (lower is better)
Translates to: EPGKCVWARAPC*LGRVPAPGGRR
Trigger: TCTTCGCCCGCCAGGAGCAGGGACGCGTCCGAGCCAACACGGGGCGCGCGCCCAGACGCACTTTCCCGGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS CAA 90 bp CTTGCACCCCGAGCCGGGAAAGTGCGTCTGGGCGCGCGCCCCGTGTaGGCTCGGACGCGTCCCTGCTCCTGGCGGGCGAAGACTCGCGGA +
Preference number: 6 (lower is better)
Translates to: LAPRAGKVRLGARPV*ARTRPCSWRAKTRG
Trigger: TCCGCGAGTCTTCGCCCGCCAGGAGCAGGGACGCGTCCGAGCCAACACGGGGCGCGCGCCCAGACGCACTTTCCCGGCTCGGGGTGCAAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS CCA 72 bp CTGGCTCTCTTGCACCCCGAGCCGGGAAAGTGCGTCTaGGCGCGCGCCCCGTGTTGGCTCGGACGCGTCCCT +
Preference number: 6 (lower is better)
Translates to: LALLHPEPGKCV*ARAPCWLGRVP
Trigger: AGGGACGCGTCCGAGCCAACACGGGGCGCGCGCCCAGACGCACTTTCCCGGCTCGGGGTGCAAGAGAGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS CCA 72 bp CGGTGCGCTGCCGCTTCTCCTTCGGCTTGTCTGCTTTaGGCCGAGCGCATGCCGGGCTCCCTTCGCCGCCCC +
Preference number: 6 (lower is better)
Translates to: RCAAASPSACLL*AERMPGSLRRP
Trigger: GGGGCGGCGAAGGGAGCCCGGCATGCGCTCGGCCCAAAGCAGACAAGCCGAAGGAGAAGCGGCAGCGCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS CAA 90 bp TCGCGCAGCATGCGGTCGATGCCCCGGCTCACTTTCCTCGCCTCCTaGACCGCCTCGCGCTCCTTGGCCGCCTCGCGCTCCTCGGCACTC +
Preference number: 6 (lower is better)
Translates to: SRSMRSMPRLTFLAS*TASRSLAASRSSAL
Trigger: GAGTGCCGAGGAGCGCGAGGCGGCCAAGGAGCGCGAGGCGGTCAAGGAGGCGAGGAAAGTGAGCCGGGGCATCGACCGCATGCTGCGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS TCA 72 bp TGCGGTCGATGCCCCGGCTCACTTTCCTCGCCTCCTTaGCCGCCTCGCGCTCCTTGGCCGCCTCGCGCTCCT +
Preference number: 6 (lower is better)
Translates to: CGRCPGSLSSPP*PPRAPWPPRAP
Trigger: AGGAGCGCGAGGCGGCCAAGGAGCGCGAGGCGGTCAAGGAGGCGAGGAAAGTGAGCCGGGGCATCGACCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS CAA 72 bp TCGGTGCGCTGCCGCTTCTCCTTCGGCTTGTCTGCTTaGGGCCGAGCGCATGCCGGGCTCCCTTCGCCGCCC +
Preference number: 6 (lower is better)
Translates to: SVRCRFSFGLSA*GRAHAGLPSPP
Trigger: GGGCGGCGAAGGGAGCCCGGCATGCGCTCGGCCCAAAGCAGACAAGCCGAAGGAGAAGCGGCAGCGCACCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS CAA 72 bp ATGCGGTCGATGCCCCGGCTCACTTTCCTCGCCTCCTaGACCGCCTCGCGCTCCTTGGCCGCCTCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: MRSMPRLTFLAS*TASRSLAASRS
Trigger: GGAGCGCGAGGCGGCCAAGGAGCGCGAGGCGGTCAAGGAGGCGAGGAAAGTGAGCCGGGGCATCGACCGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS GCA 72 bp CTGCTCGGTGCGCTGCCGCTTCTCCTTCGGCTTGTCTaGTTTGGGCCGAGCGCATGCCGGGCTCCCTTCGCC +
Preference number: 6 (lower is better)
Translates to: LLGALPLLLRLV*FGPSACRAPFA
Trigger: GGCGAAGGGAGCCCGGCATGCGCTCGGCCCAAAGCAGACAAGCCGAAGGAGAAGCGGCAGCGCACCGAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS GCA 72 bp CGCTCCTTGGCCGCCTCGCGCTCCTCGGCACTCAGCTaGTCGGTGCGCTGCCGCTTCTCCTTCGGCTTGTCT +
Preference number: 6 (lower is better)
Translates to: RSLAASRSSALS*SVRCRFSFGLS
Trigger: AGACAAGCCGAAGGAGAAGCGGCAGCGCACCGAGCAGCTGAGTGCCGAGGAGCGCGAGGCGGCCAAGGAGCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS CCA 72 bp AGCAGGAGCCGGTGCGTCTGCTGCAGGTCGCGCTTCTaGTCGCGCAGCATGCGGTCGATGCCCCGGCTCACT +
Preference number: 6 (lower is better)
Translates to: SRSRCVCCRSRF*SRSMRSMPRLT
Trigger: AGTGAGCCGGGGCATCGACCGCATGCTGCGCGACCAGAAGCGCGACCTGCAGCAGACGCACCGGCTCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS GCA 72 bp GCCTCGCGCTCCTCGGCACTCAGCTGCTCGGTGCGCTaGCGCTTCTCCTTCGGCTTGTCTGCTTTGGGCCGA +
Preference number: 6 (lower is better)
Translates to: ASRSSALSCSVR*RFSFGLSALGR
Trigger: TCGGCCCAAAGCAGACAAGCCGAAGGAGAAGCGGCAGCGCACCGAGCAGCTGAGTGCCGAGGAGCGCGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS GCA 72 bp TGGCCGCCTCGCGCTCCTCGGCACTCAGCTGCTCGGTaGGCTGCCGCTTCTCCTTCGGCTTGTCTGCTTTGG +
Preference number: 6 (lower is better)
Translates to: WPPRAPRHSAAR*AAASPSACLLW
Trigger: CCAAAGCAGACAAGCCGAAGGAGAAGCGGCAGCGCACCGAGCAGCTGAGTGCCGAGGAGCGCGAGGCGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS GCA 72 bp GCGTCTGCTGCAGGTCGCGCTTCTGGTCGCGCAGCATaGGGTCGATGCCCCGGCTCACTTTCCTCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: ASAAGRASGRAA*GRCPGSLSSPP
Trigger: AGGAGGCGAGGAAAGTGAGCCGGGGCATCGACCGCATGCTGCGCGACCAGAAGCGCGACCTGCAGCAGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334049.11
ENST00000585590.1
CDS CCA 72 bp GCGCGCCCCGTGTTGGCTCGGACGCGTCCCTGCTCCTaGCGGGCGAAGACTCGCGGAGGATCATGCATATTC +
Preference number: 6 (lower is better)
Translates to: ARPVLARTRPCS*RAKTRGGSCIF
Trigger: GAATATGCATGATCCTCCGCGAGTCTTCGCCCGCCAGGAGCAGGGACGCGTCCGAGCCAACACGGGGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS CAA 90 bp CCCCTGGACGGAAGCCCTTCAGCACCCGCGGCTGGGCAGGTGGCCTaGGCTGTCAGCCAGTGGTGGTGCTTCTCCTTGGTGCTCCGTCTT +
Preference number: 6 (lower is better)
Translates to: PLDGSPSAPAAGQVA*AVSQWWCFSLVLRL
Trigger: AAGACGGAGCACCAAGGAGAAGCACCACCACTGGCTGACAGCCAAGGCCACCTGCCCAGCCGCGGGTGCTGAAGGGCTTCCGTCCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS CCA 72 bp CAGTCAGGCAGTCCGGGGCGCCGCTCCGTCGCAGGGTaGCGGCAGCATCCTCACAAGAGCTCATACTGCTTG +
Preference number: 6 (lower is better)
Translates to: QSGSPGRRSVAG*RQHPHKSSYCL
Trigger: CAAGCAGTATGAGCTCTTGTGAGGATGCTGCCGCCACCCTGCGACGGAGCGGCGCCCCGGACTGCCTGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
CDS CCA 72 bp GAAGCCCTTCAGCACCCGCGGCTGGGCAGGTGGCCTTaGCTGTCAGCCAGTGGTGGTGCTTCTCCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: EALQHPRLGRWP*LSASGGASPWC
Trigger: GCACCAAGGAGAAGCACCACCACTGGCTGACAGCCAAGGCCACCTGCCCAGCCGCGGGTGCTGAAGGGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS CAA 72 bp GGAAGCCCTTCAGCACCCGCGGCTGGGCAGGTGGCCTaGGCTGTCAGCCAGTGGTGGTGCTTCTCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: GSPSAPAAGQVA*AVSQWWCFSLV
Trigger: CACCAAGGAGAAGCACCACCACTGGCTGACAGCCAAGGCCACCTGCCCAGCCGCGGGTGCTGAAGGGCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS CCA 72 bp CCCGCGGCTGGGCAGGTGGCCTTGGCTGTCAGCCAGTaGTGGTGCTTCTCCTTGGTGCTCCGTCTTCAGGAA +
Preference number: 6 (lower is better)
Translates to: PAAGQVALAVSQ*WCFSLVLRLQE
Trigger: TTCCTGAAGACGGAGCACCAAGGAGAAGCACCACCACTGGCTGACAGCCAAGGCCACCTGCCCAGCCGCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS GCA 72 bp CTTCCGTCGTCTTGCTGTTGCCGCCCAAACACCCCATaGCTGCCCGCTGGGATGGACGTCAGGAAGTTAGGA +
Preference number: 6 (lower is better)
Translates to: LPSSCCCRPNTP*LPAGMDVRKLG
Trigger: TCCTAACTTCCTGACGTCCATCCCAGCGGGCAGGCATGGGGTGTTTGGGCGGCAACAGCAAGACGACGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000423027.8
ENST00000535121.5
CDS GCA 72 bp GCAGGGTGGCGGCAGCATCCTCACAAGAGCTCATACTaGTTGAGGTGCATCCGCTGGATGATGTCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: AGWRQHPHKSSY*LRCIRWMMSRQ
Trigger: CTGCCGCGACATCATCCAGCGGATGCACCTCAAGCAGTATGAGCTCTTGTGAGGATGCTGCCGCCACCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000602628.1
CDS CAA 72 bp CGTTCTTTTTCATCGACGCCCTGGTCTTCCGTCGTCTaGCTGTTGCCGCCCAAACACCCCATGCCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: RSFSSTPWSSVV*LLPPKHPMPAR
Trigger: GCGGGCAGGCATGGGGTGTTTGGGCGGCAACAGCAAGACGACGGAAGACCAGGGCGTCGATGAAAAAGAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000423027.8
ENST00000535121.5
CDS CAA 72 bp GGGTGGCGGCAGCATCCTCACAAGAGCTCATACTGCTaGAGGTGCATCCGCTGGATGATGTCGCGGCAGTCG +
Preference number: 6 (lower is better)
Translates to: GWRQHPHKSSYC*RCIRWMMSRQS
Trigger: CGACTGCCGCGACATCATCCAGCGGATGCACCTCAAGCAGTATGAGCTCTTGTGAGGATGCTGCCGCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000602628.1
CDS TCA 72 bp ACACCCTGCGGATGTTCTCTGTGTCCACGGCGCAGGTaGAGTGCGGGTAGCAGTAATGTTTGCCGTCACCGG +
Preference number: 6 (lower is better)
Translates to: TPCGCSLCPRRR*SAGSSNVCRHR
Trigger: CCGGTGACGGCAAACATTACTGCTACCCGCACTTCACCTGCGCCGTGGACACAGAGAACATCCGCAGGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000535121.5
ENST00000602628.1
CDS GCA 72 bp GTTCTTTTTCATCGACGCCCTGGTCTTCCGTCGTCTTaGTGTTGCCGCCCAAACACCCCATGCCTGCCCGCT +
Preference number: 6 (lower is better)
Translates to: VLFHRRPGLPSS*CCRPNTPCLPA
Trigger: AGCGGGCAGGCATGGGGTGTTTGGGCGGCAACAGCAAGACGACGGAAGACCAGGGCGTCGATGAAAAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000423027.8
ENST00000535121.5
CDS GCA 72 bp GCTGGGCAGGTGGCCTTGGCTGTCAGCCAGTGGTGGTaGTTCTCCTTGGTGCTCCGTCTTCAGGAACAGTAT +
Preference number: 6 (lower is better)
Translates to: AGQVALAVSQWW*FSLVLRLQEQY
Trigger: ATACTGTTCCTGAAGACGGAGCACCAAGGAGAAGCACCACCACTGGCTGACAGCCAAGGCCACCTGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586926.1
CDS CCA 72 bp TTGCTGTTGCCGCCCAAACACCCCATGCCTGCCCGCTaGGATGGACGTCAGGAAGTTAGGAATGTGCGCAAA +
Preference number: 6 (lower is better)
Translates to: LLLPPKHPMPAR*DGRQEVRNVRK
Trigger: TTTGCGCACATTCCTAACTTCCTGACGTCCATCCCAGCGGGCAGGCATGGGGTGTTTGGGCGGCAACAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000423027.8
ENST00000535121.5
CDS TCA 72 bp TGCGGCTCCTGCGACGGCTCCTCTCTTTCCTGCTGCTaGAAGAGATGGTCTGGTCTCTTCGGTGTTTTCCGA +
Preference number: 6 (lower is better)
Translates to: CGSCDGSSLSCC*KRWSGLFGVFR
Trigger: TCGGAAAACACCGAAGAGACCAGACCATCTCTTTCAGCAGCAGGAAAGAGAGGAGCCGTCGCAGGAGCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS CCA 72 bp TTGTTGGCCTCGCGTCGTTCTTTTTCATCGACGCCCTaGTCTTCCGTCGTCTTGCTGTTGCCGCCCAAACAC +
Preference number: 6 (lower is better)
Translates to: LLASRRSFSSTP*SSVVLLLPPKH
Trigger: GTGTTTGGGCGGCAACAGCAAGACGACGGAAGACCAGGGCGTCGATGAAAAAGAACGACGCGAGGCCAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000423027.8
ENST00000535121.5
CDS CCA 72 bp CGGCTCCTCTCTTTCCTGCTGCTGAAAGAGATGGTCTaGTCTCTTCGGTGTTTTCCGATTCAGAGCAGGCGT +
Preference number: 6 (lower is better)
Translates to: RLLSFLLLKEMV*SLRCFPIQSRR
Trigger: ACGCCTGCTCTGAATCGGAAAACACCGAAGAGACCAGACCATCTCTTTCAGCAGCAGGAAAGAGAGGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS CAA 72 bp AGGAAGTTAGGAATGTGCGCAAAAAGCAATAGAGAGTaGGAGACGTGTGCGGCTCCTGCGACGGCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: RKLGMCAKSNRE*ETCAAPATAPL
Trigger: GAGAGGAGCCGTCGCAGGAGCCGCACACGTCTCCAACTCTCTATTGCTTTTTGCGCACATTCCTAACTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269162.9
ENST00000423027.8
ENST00000535121.5
CDS CAA 90 bp ATGGACGTCAGGAAGTTAGGAATGTGCGCAAAAAGCAATAGAGAGTaGGAGACGTGTGCGGCTCCTGCGACGGCTCCTCTCTTTCCTGAC +
Preference number: 6 (lower is better)
Translates to: MDVRKLGMCAKSNRE*ETCAAPATAPLFPD
Trigger: GTCAGGAAAGAGAGGAGCCGTCGCAGGAGCCGCACACGTCTCCAACTCTCTATTGCTTTTTGCGCACATTCCTAACTTCCTGACGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269162.9
CDS CAA 90 bp ATGGACGTCAGGAAGTTAGGAATGTGCGCAAAAAGCAATAGAGAGTaGGAGACGTGTGCGGCTCCTGCGACGGCTCCTCTCTTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: MDVRKLGMCAKSNRE*ETCAAPATAPLFPA
Trigger: AGCAGGAAAGAGAGGAGCCGTCGCAGGAGCCGCACACGTCTCCAACTCTCTATTGCTTTTTGCGCACATTCCTAACTTCCTGACGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423027.8
CDS CAA 90 bp ATGGACGTCAGGAAGTTAGGAATGTGCGCAAAAAGCAATAGAGAGTaGGAGACGTGTGCGGCTCCTGCGACGGCTCCTCTCTTTCCTGCA +
Preference number: 6 (lower is better)
Translates to: MDVRKLGMCAKSNRE*ETCAAPATAPLFPA
Trigger: TGCAGGAAAGAGAGGAGCCGTCGCAGGAGCCGCACACGTCTCCAACTCTCTATTGCTTTTTGCGCACATTCCTAACTTCCTGACGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535121.5
CDS TCA 72 bp GGAGGTCCTGGTCTGTGGGTGTGTAGTCAACCAAGCTaGCGCTGTCGATTCTTTCCAGGAAGTATTGTGCAC +
Preference number: 6 (lower is better)
Translates to: GGPGLWVCSQPS*RCRFFPGSIVH
Trigger: GTGCACAATACTTCCTGGAAAGAATCGACAGCGTCAGCTTGGTTGACTACACACCCACAGACCAGGACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000535121.5
ENST00000585642.5
ENST00000590228.1
CDS TCA 72 bp CAGCATGTGCAGCTGAACCATGTCCCAGGTGATCAGTaGTTCATGGTGACTCGTCATCCAAGAGCGTGTTCC +
Preference number: 6 (lower is better)
Translates to: QHVQLNHVPGDQ*FMVTRHPRACS
Trigger: GGAACACGCTCTTGGATGACGAGTCACCATGAATCACTGATCACCTGGGACATGGTTCAGCTGCACATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602628.1
CDS CAA 90 bp CCGGTGGCCGTGCTGATCCTCAAAAACAGGTCCCGGATAAAGAACTaGGCTCTTGTAACTTTGGGATCTTCTCCTGCATCTGGTGTTGCG +
Preference number: 6 (lower is better)
Translates to: PVAVLILKNRSRIKN*ALVTLGSSPASGVA
Trigger: CGCAACACCAGATGCAGGAGAAGATCCCAAAGTTACAAGAGCCAAGTTCTTTATCCGGGACCTGTTTTTGAGGATCAGCACGGCCACCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000535121.5
ENST00000602628.1
CDS CAA 90 bp ATCCTCAAAAACAGGTCCCGGATAAAGAACTTGGCTCTTGTAACTTaGGGATCTTCTCCTGCATCTGGTGTTGCGTCTTCAGGAACAGTA +
Preference number: 6 (lower is better)
Translates to: ILKNRSRIKNLALVT*GSSPASGVASSGTV
Trigger: TACTGTTCCTGAAGACGCAACACCAGATGCAGGAGAAGATCCCAAAGTTACAAGAGCCAAGTTCTTTATCCGGGACCTGTTTTTGAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000535121.5
ENST00000602628.1
CDS CAA 72 bp GTGCTGATCCTCAAAAACAGGTCCCGGATAAAGAACTaGGCTCTTGTAACTTTGGGATCTTCTCCTGCATCT +
Preference number: 6 (lower is better)
Translates to: VLILKNRSRIKN*ALVTLGSSPAS
Trigger: AGATGCAGGAGAAGATCCCAAAGTTACAAGAGCCAAGTTCTTTATCCGGGACCTGTTTTTGAGGATCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000535121.5
ENST00000602628.1
CDS CCA 72 bp TGCTTTCAAAAAGATCCAGGGACTCTCTCAGCCTGTTaGTGTTGTTATCTTCTCGAATCACCATGTTGTAGC +
Preference number: 6 (lower is better)
Translates to: CFQKDPGTLSAC*CCYLLESPCCS
Trigger: GCTACAACATGGTGATTCGAGAAGATAACAACACCAACAGGCTGAGAGAGTCCCTGGATCTTTTTGAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000535121.5
ENST00000602628.1
CDS GCA 72 bp AAAGAACTTGGCTCTTGTAACTTTGGGATCTTCTCCTaGATCTGGTGTTGCGTCTTCAGGAACAGTATAATT +
Preference number: 6 (lower is better)
Translates to: KELGSCNFGIFS*IWCCVFRNSII
Trigger: AATTATACTGTTCCTGAAGACGCAACACCAGATGCAGGAGAAGATCCCAAAGTTACAAGAGCCAAGTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000535121.5
ENST00000602628.1
CDS TCA 72 bp GGCCAGCGGAACTGGAGGTATTATAGTACTCATTGCTaGAACAATTGTCACGATAGCATCTTTAACATTTTT +
Preference number: 6 (lower is better)
Translates to: GQRNWRYYSTHC*NNCHDSIFNIF
Trigger: AAAAATGTTAAAGATGCTATCGTGACAATTGTTTCAGCAATGAGTACTATAATACCTCCAGTTCCGCTGGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269162.9
ENST00000334049.11
ENST00000423027.8
ENST00000535121.5
ENST00000585642.5
ENST00000590228.1
ENST00000590972.1