RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNAI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000114353

Ensembl transcript IDs: ENST00000266027.9, ENST00000313601.11, ENST00000422163.5, ENST00000440628.5, ENST00000441156.5, ENST00000446079.5, ENST00000451956.1, ENST00000468422.1, ENST00000480090.1, ENST00000490122.5, ENST00000491100.5, ENST00000492383.1

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGGGGCCTCCGAGCGGCTaGGGTTGGGGGACTGGGCAG +
Preference number: 2 (lower is better)
Translates to: GRGAARTGAASRGTGVNTGPPSG*GWGTGQ
Trigger: CTGCCCAGTCCCCCAACCCCAGCCGCTCGGAGGCCC...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CCA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGTGGGGCCAGGGCCGCTaGGGCAGGGCCCTCAGTGAC +
Preference number: 2 (lower is better)
Translates to: GRGAARTGAASRGTGVNTWGQGR*GRALSD
Trigger: GTCACTGAGGGCCCTGCCCCAGCGGCCCTGGCCCCA...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CCA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGGGCAGGGGCTGGTGTTaGGCAAAGCTGGGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: GRGAARTGAASRGTGVNTGRGWC*AKLGVQ
Trigger: CTGGACCCCCAGCTTTGCCCAACACCAGCCCCTGCC...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR TCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACAGGAAGTGTTCAACGCTaGAGGCCCCGGGCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTGSVQR*RPRAWD
Trigger: GTCCCAGGCCCGGGGCCTTCAGCGTTGAACACTTCC...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTGGGGCCAGGGCCGCTaGGGCAGGGCCCTCAGTGAC +
Preference number: 2 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRWGQGR*GRALSD
Trigger: GTCACTGAGGGCCCTGCCCCAGCGGCCCTGGCCCCA...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCGGGCCTCCGAGCGGCTaGGGTTGGGGGACTGGGCAG +
Preference number: 2 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFGPPSG*GWGTGQ
Trigger: CTGCCCAGTCCCCCAACCCCAGCCGCTCGGAGGCCC...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGGGCCTCCGAGCGGCTaGGGTTGGGGGACTGGGCAG +
Preference number: 2 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLGPPSG*GWGTGQ
Trigger: CTGCCCAGTCCCCCAACCCCAGCCGCTCGGAGGCCC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGACGAGAATGAGCAGGTaGACTGTGGTTTCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: GRGAARTGAASRGTGVNTTRMSR*TVVSRN
Trigger: ATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTGGGCCTCCGAGCGGCTaGGGTTGGGGGACTGGGCAG +
Preference number: 2 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLGPPSG*GWGTGQ
Trigger: CTGCCCAGTCCCCCAACCCCAGCCGCTCGGAGGCCC...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACAGGTTTCCAGGAATGGTaGCGTCTCACGCTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTGFQEW*RLTLLV
Trigger: CACAAGAAGCGTGAGACGCCACCATTCCTGGAAACC...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACAGTCTGGAACAGCCCTTaGAACCCAATTCTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTVWNSP*NPILWR
Trigger: CCTCCACAGAATTGGGTTCCAAGGGCTGTTCCAGAC...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CCA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACTCTCCACGATCCCCGTaGTCTTTACGCGGGTCCGTA +
Preference number: 2 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHSPRSP*SLRGSV
Trigger: TACGGACCCGCGTAAAGACCACGGGGATCGTGGAGA...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441156.5
3UTR-3UTR TCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCGGGCAGGGCCCTCAGTaGCGTTGGCAGTTGTCTGGA +
Preference number: 2 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRGQGPQ*RWQLSG
Trigger: TCCAGACAACTGCCAACGTCACTGAGGGCCCTGCCC...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR TCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGAGGCAGCTGAGTCGTTaGGCTGGTATTCCCTTGAGC +
Preference number: 2 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGRQLSR*AGIPLS
Trigger: GCTCAAGGGAATACCAGCTCAACGACTCAGCTGCCT...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446079.5
3UTR-3UTR CCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGGCAGGGGCTGGTGTTaGGCAAAGCTGGGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLGRGWC*AKLGVQ
Trigger: CTGGACCCCCAGCTTTGCCCAACACCAGCCCCTGCC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACAACGAGAATGAGCAGGTaGACTGTGGTTTCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTTRMSR*TVVSRN
Trigger: ATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR TCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGCAGGTAGTAGGCAGCTaGGTCGTTGAGCTGGTATTC +
Preference number: 2 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGQVVGS*VVELVF
Trigger: GAATACCAGCTCAACGACTCAGCTGCCTACTACCTG...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446079.5
3UTR-3UTR GCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCCGGCCAAAGCAGGCCTaGACACCATGGTCAGCCCAG +
Preference number: 2 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFRPKQA*TPWSAQ
Trigger: CTGGGCTGACCATGGTGTGCAGGCCTGCTTTGGCCG...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446079.5
3UTR-3UTR CCA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACTGTGGTTTCCAGGAATaGTGGCGTCTCACGCTTCTT +
Preference number: 2 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHCGFQE*WRLTLL
Trigger: AAGAAGCGTGAGACGCCACCATTCCTGGAAACCACA...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCGGCAGGGGCTGGTGTTaGGCAAAGCTGGGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLGRGWC*AKLGVQ
Trigger: CTGGACCCCCAGCTTTGCCCAACACCAGCCCCTGCC...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACACGAGAATGAGCAGGTaGACTGTGGTTTCCAGGAAT +
Preference number: 2 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHTRMSR*TVVSRN
Trigger: ATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR GCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGATGTAGTCACTCTGTaGAATACGCTCCAGGTCGTT +
Preference number: 2 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGDVVTL*NTLQVV
Trigger: AACGACCTGGAGCGTATTGCACAGAGTGACTACATC...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000446079.5
3UTR-3UTR CCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCGTAAACATTTGGACTTaGGCTGGGGCAGGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRVNIWT*AGAGAG
Trigger: ACCAGCCCCTGCCCCAGCCCAAGTCCAAATGTTTAC...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCTTTaGGGCCTCCGAGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFLCFFL*GLRAAG
Trigger: CCCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAA...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTCTCCACGATCCCCGTaGTCTTTACGCGGGTCCGTA +
Preference number: 2 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFSPRSP*SLRGSV
Trigger: TACGGACCCGCGTAAAGACCACGGGGATCGTGGAGA...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR TCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCGAGCTGGTATTCCCTTaGGCGGCCAAAGCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLELVFP*AAKAGL
Trigger: CAGGCCTGCTTTGGCCGCTCAAGGGAATACCAGCTC...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446079.5
3UTR-3UTR CCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCGTAAACATTTGGACTTaGGCTGGGGCAGGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFVNIWT*AGAGAG
Trigger: ACCAGCCCCTGCCCCAGCCCAAGTCCAAATGTTTAC...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGTAAACATTTGGACTTaGGCTGGGGCAGGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLVNIWT*AGAGAG
Trigger: ACCAGCCCCTGCCCCAGCCCAAGTCCAAATGTTTAC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCGTCTGGAACAGCCCTTaGAACCCAATTCTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRVWNSP*NPILWR
Trigger: CCTCCACAGAATTGGGTTCCAAGGGCTGTTCCAGAC...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR GCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGTATCGAATAGCTTCATaGTCTCATGCATGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGYRIAS*SHACGS
Trigger: TGAACCGCATGCATGAGAGCATGAAGCTATTCGATA...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR GCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTTATCGAATAGCTTCATaGTCTCATGCATGCGGTTCA +
Preference number: 2 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAYRIAS*SHACGS
Trigger: TGAACCGCATGCATGAGAGCATGAAGCTATTCGATA...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCGTAAACATTTGGACTTaGGCTGGGGCAGGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: GGLWFPGMVASHASCAFSVNIWT*AGAGAG
Trigger: ACCAGCCCCTGCCCCAGCCCAAGTCCAAATGTTTAC...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCTTGTGCTTTTTCCTTTaGGGCCTCCGAGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLLCFFL*GLRAAG
Trigger: CCCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAA...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGCTGAGTCGTTGAGCTaGTATTCCCTTGAGCGGCCA +
Preference number: 2 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLAESLS*YSLERP
Trigger: TGGCCGCTCAAGGGAATACCAGCTCAACGACTCAGC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446079.5
3UTR-3UTR TCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTCAGGGGACTGTGTGTaGTCTTCTCCTCAAACAGGT +
Preference number: 2 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFSGDCV*SSPQTG
Trigger: ACCTGTTTGAGGAGAAGATCACACACAGTCCCCTGA...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR TCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTCAGGGGACTGTGTGTaGTCTTCTCCTCAAACAGGT +
Preference number: 2 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLSGDCV*SSPQTG
Trigger: ACCTGTTTGAGGAGAAGATCACACACAGTCCCCTGA...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR GCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCAGCTTCATGCTCTCATaGATGCGGTTCATCTCCTCG +
Preference number: 2 (lower is better)
Translates to: GGLWFPGMVASHASCAFSSFMLS*MRFISS
Trigger: CGAGGAGATGAACCGCATGCATGAGAGCATGAAGCT...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTTTGTGCTTTTTCCTTTaGGGCCTCCGAGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRLCFFL*GLRAAG
Trigger: CCCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAA...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTGCACATCTTGCTGTGTaGGGATGTAGTCACTCTGTG +
Preference number: 2 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLAHLAV*GCSHSV
Trigger: CACAGAGTGACTACATCCCCACACAGCAAGATGTGC...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR GCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCAGCTTCATGCTCTCATaGATGCGGTTCATCTCCTCG +
Preference number: 2 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLSFMLS*MRFISS
Trigger: CGAGGAGATGAACCGCATGCATGAGAGCATGAAGCT...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCCACAGAACAAGACAATaGTTAAAAACCAGAACAGAT +
Preference number: 2 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGHRTRQ*LKTRTD
Trigger: ATCTGTTCTGGTTTTTAACCATTGTCTTGTTCTGTG...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCTGTGGTTTCCAGGAATaGTGGCGTCTCACGCTTCTT +
Preference number: 2 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLCGFQE*WRLTLL
Trigger: AAGAAGCGTGAGACGCCACCATTCCTGGAAACCACA...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCGCACATCTTGCTGTGTaGGGATGTAGTCACTCTGTG +
Preference number: 2 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLAHLAV*GCSHSV
Trigger: CACAGAGTGACTACATCCCCACACAGCAAGATGTGC...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGCCTCATCATATTTGTTaGCCCCTGTGTACTCAGGGA +
Preference number: 2 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLPHHIC*PLCTQG
Trigger: TCCCTGAGTACACAGGGGCCAACAAATATGATGAGG...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR GCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCACTTGTTGTTGCAGATaGTATCGAATAGCTTCATGC +
Preference number: 2 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRTCCCR*YRIASC
Trigger: GCATGAAGCTATTCGATAGCATCTGCAACAACAAGT...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCCACAGAACAAGACAATaGTTAAAAACCAGAACAGAT +
Preference number: 2 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRHRTRQ*LKTRTD
Trigger: ATCTGTTCTGGTTTTTAACCATTGTCTTGTTCTGTG...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCCTCATCATATTTGTTaGCCCCTGTGTACTCAGGGA +
Preference number: 2 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRPHHIC*PLCTQG
Trigger: TCCCTGAGTACACAGGGGCCAACAAATATGATGAGG...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTCACAGAACAAGACAATaGTTAAAAACCAGAACAGAT +
Preference number: 2 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLHRTRQ*LKTRTD
Trigger: ATCTGTTCTGGTTTTTAACCATTGTCTTGTTCTGTG...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGCACAGAACAAGACAATaGTTAAAAACCAGAACAGAT +
Preference number: 2 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLHRTRQ*LKTRTD
Trigger: ATCTGTTCTGGTTTTTAACCATTGTCTTGTTCTGTG...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCCACAGAACAAGACAATaGTTAAAAACCAGAACAGAT +
Preference number: 2 (lower is better)
Translates to: GGLWFPGMVASHASCAFSHRTRQ*LKTRTD
Trigger: ATCTGTTCTGGTTTTTAACCATTGTCTTGTTCTGTG...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CAA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGGCTCCCTGTAAACATTaGGACTTGGGCTGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: GRGAARTGAASRGTGVNTAPCKH*DLGWGR
Trigger: CCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGC...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CAA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGTGTCTGGAACAGCCCTaGGAACCCAATTCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: GRGAARTGAASRGTGVNTCLEQP*EPNSVE
Trigger: CTCCACAGAATTGGGTTCCAAGGGCTGTTCCAGACA...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CAA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACCTTGTGCTTTTTCCTTaGGGGCCTCCGAGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHLVLFP*GPPSGW
Trigger: CCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAAG...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CAA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACAGGCGTCTCACGCTTCTaGTGCTTTTTCCTTTGGGGC +
Preference number: 3 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTGVSRF*CFFLWG
Trigger: GCCCCAAAGGAAAAAGCACAAGAAGCGTGAGACGCC...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CAA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCCTTGTGCTTTTTCCTTaGGGGCCTCCGAGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRLVLFP*GPPSGW
Trigger: CCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAAG...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CAA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCTTGAAGTGTAGGTCCTaGAAGGTGAAGTGTGTCTCC +
Preference number: 3 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGLKCRS*KVKCVS
Trigger: GGAGACACACTTCACCTTCAAGGACCTACACTTCAA...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CAA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCGGGCCCTCAGTGACGTaGGCAGTTGTCTGGAACAGC +
Preference number: 3 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLGPSVT*AVVWNS
Trigger: GCTGTTCCAGACAACTGCCAACGTCACTGAGGGCCC...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
3UTR-3UTR CAA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTCCCACATCAAACATCTaGAAGTGTAGGTCCTTGAAG +
Preference number: 3 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAPTSNI*KCRSLK
Trigger: CTTCAAGGACCTACACTTCAAGATGTTTGATGTGGG...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CAA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTGCTCCCTGTAAACATTaGGACTTGGGCTGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRAPCKH*DLGWGR
Trigger: CCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGC...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CAA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCCCCACATCAAACATCTaGAAGTGTAGGTCCTTGAAG +
Preference number: 3 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRPTSNI*KCRSLK
Trigger: CTTCAAGGACCTACACTTCAAGATGTTTGATGTGGG...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
3UTR-3UTR CAA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTTTGAAGTGTAGGTCCTaGAAGGTGAAGTGTGTCTCC +
Preference number: 3 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRLKCRS*KVKCVS
Trigger: GGAGACACACTTCACCTTCAAGGACCTACACTTCAA...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCCTCGGCGCTCACGGTaGAGCCCATCCCGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: GRGAARTGAASRGTGVNTPRRSR*SPSRRP
Trigger: CGGACGGCGGGATGGGCTGCACCGTGAGCGCCGAGG...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACATGGGGCCAGGGCCGCTaGGGCAGGGCCCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTWGQGR*GRALSD
Trigger: GTCACTGAGGGCCCTGCCCCAGCGGCCCTGGCCCCA...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR TCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACCCAGAGCCTCCGGATaGCGCCGGACAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTPRASG*RRTGHQ
Trigger: CTGATGACCTGTCCGGCGTCATCCGGAGGCTCTGGG...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGGACAGTGCAAATAGCTaGCTGGCGTCGTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRGAARTGAASRGTGVNTDSANS*LASSAL
Trigger: CAGAGCGGACGACGCCAGGCAGCTATTTGCACTGTC...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGTCTCCACGATCCCCGTaGTCTTTACGCGGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: GRGAARTGAASRGTGVNTSPRSP*SLRGSV
Trigger: TACGGACCCGCGTAAAGACCACGGGGATCGTGGAGA...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTGGGCCTCCGAGCGGCTaGGGTTGGGGGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAGPPSG*GWGTGQ
Trigger: CTGCCCAGTCCCCCAACCCCAGCCGCTCGGAGGCCC...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCTTGCTCCTCGGCGGTaGAGGACAGTGCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: GRGAARTGAASRGTGVNTLAPRR*RTVQIA
Trigger: AGCTATTTGCACTGTCCTGCACCGCCGAGGAGCAAG...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCGCTCCGCATCGCCCATaGCAGCCTAGGGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGAPHRP*QPRAAA
Trigger: CGCAGCGGCCCTAGGCTGGCATGGGCGATGCGGAGC...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR TCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACAGAGCTGGTATTCCCTTaGGCGGCCAAAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTELVFP*AAKAGL
Trigger: CAGGCCTGCTTTGGCCGCTCAAGGGAATACCAGCTC...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp GGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCGGCAGGGGCTGGTGTTaGGCAAAGCTGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GTGQEAPCKHLDLGWGRGGRGWC*AKLGVQ
Trigger: CTGGACCCCCAGCTTTGCCCAACACCAGCCCCTGCC...GCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGAGGTCAGGCAGTCCGTaGGGGGTCTGGCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGRSGSP*GVWLAP
Trigger: GGGAGCCAGCCAGACCCCCCACGGACTGCCTGACCT...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR TCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGCCCAGAGCCTCCGGATaGCGCCGGACAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGPRASG*RRTGHQ
Trigger: CTGATGACCTGTCCGGCGTCATCCGGAGGCTCTGGG...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCGGGCAGGGCCCTCAGTaGCGTTGGCAGTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTGQEAPCKHLDLGWGRGGQGPQ*RWQLSG
Trigger: TCCAGACAACTGCCAACGTCACTGAGGGCCCTGCCC...GCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR TCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCGGAAGTGTTCAACGCTaGAGGCCCCGGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGGSVQR*RPRAWD
Trigger: GTCCCAGGCCCGGGGCCTTCAGCGTTGAACACTTCC...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACAGACAGTGCAAATAGCTaGCTGGCGTCGTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTDSANS*LASSAL
Trigger: CAGAGCGGACGACGCCAGGCAGCTATTTGCACTGTC...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTTCAGGGAGCACGCCTTaGTCCTCGGCGGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGASGSTP*SSAVQD
Trigger: GTCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGA...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGGCACATCTTGCTGTGTaGGGATGTAGTCACTCTGTG +
Preference number: 4 (lower is better)
Translates to: GRGAARTGAASRGTGVNTAHLAV*GCSHSV
Trigger: CACAGAGTGACTACATCCCCACACAGCAAGATGTGC...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCGGCGGACATAGTCAATaGCGGGTCTGGGGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGGGHSQ*RVWGSG
Trigger: GCCGGACCCCCAGACCCGCCATTGACTATGTCCGCC...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR TCA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACGAGCTGGTATTCCCTTaGGCGGCCAAAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHELVFP*AAKAGL
Trigger: CAGGCCTGCTTTGGCCGCTCAAGGGAATACCAGCTC...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGCGGCCAAAGCAGGCCTaGACACCATGGTCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGRPKQA*TPWSAQ
Trigger: CTGGGCTGACCATGGTGTGCAGGCCTGCTTTGGCCG...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCACACACCTGCGCCGATaGCCAGCGTTGAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGTHLRR*PALRPY
Trigger: GTAGGGCCTCAACGCTGGGCATCGGCGCAGGTGTGT...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR CCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCTGGCGTCGTCCGCTCTaGAGGGGTCGGCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGWRRPL*RGRQSR
Trigger: TCGACTTTGCCGACCCCTCCAGAGCGGACGACGCCA...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTTGGCGTCGTCCGCTCTaGAGGGGTCGGCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAWRRPL*RGRQSR
Trigger: TCGACTTTGCCGACCCCTCCAGAGCGGACGACGCCA...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACAGCTGAGTCGTTGAGCTaGTATTCCCTTGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTAESLS*YSLERP
Trigger: TGGCCGCTCAAGGGAATACCAGCTCAACGACTCAGC...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR TCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCGAGCTGGTATTCCCTTaGGCGGCCAAAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGELVFP*AAKAGL
Trigger: CAGGCCTGCTTTGGCCGCTCAAGGGAATACCAGCTC...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGCCGATGCCCAGCGTTaGGGCCCTACCCATCCCGGG +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLADAQR*GPTHPG
Trigger: CCCGGGATGGGTAGGGCCTCAACGCTGGGCATCGGC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGGGGCCAGGGCCGCTaGGGCAGGGCCCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLWGQGR*GRALSD
Trigger: GTCACTGAGGGCCCTGCCCCAGCGGCCCTGGCCCCA...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR TCA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACATCAGGGGACTGTGTGTaGTCTTCTCCTCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTSGDCV*SSPQTG
Trigger: ACCTGTTTGAGGAGAAGATCACACACAGTCCCCTGA...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR TCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCACCTCGCCTGCTTCCTaGGGGCGGAGTAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRTSPAS*GRSSSA
Trigger: TGCGGAGCTACTCCGCCCTCAGGAAGCAGGCGAGGT...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCTCAGAACGTCCCCAGTaGCACCCGCCTTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGSERPQ*HPPFCF
Trigger: GAAGCAGAAAGGCGGGTGTCACTGGGGACGTTCTGA...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTTCAGAACGTCCCCAGTaGCACCCGCCTTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGASERPQ*HPPFCF
Trigger: GAAGCAGAAAGGCGGGTGTCACTGGGGACGTTCTGA...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTCAGGGAGCACGCCTTaGTCCTCGGCGGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRSGSTP*SSAVQD
Trigger: GTCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGA...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCCCTCGGCGCTCACGGTaGAGCCCATCCCGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLPRRSR*SPSRRP
Trigger: CGGACGGCGGGATGGGCTGCACCGTGAGCGCCGAGG...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGTGCATGCCAATATGGTaGCCTGGGCAGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGCMPIW*PGQSWQ
Trigger: CTGCCAGCTCTGCCCAGGGCACCATATTGGCATGCA...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446079.5
CDS-3UTR CCA 90 bp GGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCGCTGAGTCGTTGAGCTaGTATTCCCTTGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GTGQEAPCKHLDLGWGRGAESLS*YSLERP
Trigger: TGGCCGCTCAAGGGAATACCAGCTCAACGACTCAGC...GCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTTCTCCACGATCCCCGTaGTCTTTACGCGGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGASPRSP*SLRGSV
Trigger: TACGGACCCGCGTAAAGACCACGGGGATCGTGGAGA...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCGGGCCTCCGAGCGGCTaGGGTTGGGGGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLGPPSG*GWGTGQ
Trigger: CTGCCCAGTCCCCCAACCCCAGCCGCTCGGAGGCCC...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTTTGTGCTTTTTCCTTTaGGGCCTCCGAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGALCFFL*GLRAAG
Trigger: CCCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAA...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCTGGGGCCAGGGCCGCTaGGGCAGGGCCCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLWGQGR*GRALSD
Trigger: GTCACTGAGGGCCCTGCCCCAGCGGCCCTGGCCCCA...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCCTTCCAGGACTGTCCTaGAGCATCAAGGCTCGACCG +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGLPGLS*SIKARP
Trigger: CGGTCGAGCCTTGATGCTCCAGGACAGTCCTGGAAG...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR TCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCGGAAGTGTTCAACGCTaGAGGCCCCGGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFGSVQR*RPRAWD
Trigger: GTCCCAGGCCCGGGGCCTTCAGCGTTGAACACTTCC...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR TCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTCCGTGGGGGCTCGGATaGCTTGCTGAGTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAPWGLG*LAEFDF
Trigger: GAAATCAAACTCAGCAAGTCATCCGAGCCCCCACGG...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCCCGTGGGGGCTCGGATaGCTTGCTGAGTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGPWGLG*LAEFDF
Trigger: GAAATCAAACTCAGCAAGTCATCCGAGCCCCCACGG...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR GCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGGGGCAGAGGGCAGCTaGCTAGCCAGGGCCTCACGA +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLGAEGS*LARASR
Trigger: TCGTGAGGCCCTGGCTAGGCAGCTGCCCTCTGCCCC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266027.9
CDS-3UTR GCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCACAACCGCCCGGTACTaGCGGCATTCCTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRTTARY*RHSSSE
Trigger: CTCCGAGGAGGAATGCCGGCAGTACCGGGCGGTTGT...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCCGGCCAAAGCAGGCCTaGACACCATGGTCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRRPKQA*TPWSAQ
Trigger: CTGGGCTGACCATGGTGTGCAGGCCTGCTTTGGCCG...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCGCTGAGTCGTTGAGCTaGTATTCCCTTGAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGAESLS*YSLERP
Trigger: TGGCCGCTCAAGGGAATACCAGCTCAACGACTCAGC...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTGTAAACATTTGGACTTaGGCTGGGGCAGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAVNIWT*AGAGAG
Trigger: ACCAGCCCCTGCCCCAGCCCAAGTCCAAATGTTTAC...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGTAAACATTTGGACTTaGGCTGGGGCAGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGVNIWT*AGAGAG
Trigger: ACCAGCCCCTGCCCCAGCCCAAGTCCAAATGTTTAC...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGCACCAGAGGAGGCATaGCTTGACCCCATGCCCACC +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLAPEEA*LDPMPT
Trigger: GGTGGGCATGGGGTCAAGTCATGCCTCCTCTGGTGC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266027.9
CDS-3UTR TCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCCAGGTAGTAGGCAGCTaGGTCGTTGAGCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGQVVGS*VVELVF
Trigger: GAATACCAGCTCAACGACTCAGCTGCCTACTACCTG...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCGGGCAGGGCCCTCAGTaGCGTTGGCAGTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFGQGPQ*RWQLSG
Trigger: TCCAGACAACTGCCAACGTCACTGAGGGCCCTGCCC...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR TCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGGGCAGGGCCCTCAGTaGCGTTGGCAGTTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLGQGPQ*RWQLSG
Trigger: TCCAGACAACTGCCAACGTCACTGAGGGCCCTGCCC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGTCGGCAAAGTCGATCTaGAGGTTGCCCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGSAKSI*RLPMAL
Trigger: CAAAGCCATGGGCAACCTGCAGATCGACTTTGCCGA...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCTCGGCAAAGTCGATCTaGAGGTTGCCCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGSAKSI*RLPMAL
Trigger: CAAAGCCATGGGCAACCTGCAGATCGACTTTGCCGA...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTCAGGGAGCACGCCTTaGTCCTCGGCGGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLSGSTP*SSAVQD
Trigger: GTCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGA...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTCGGCCAAAGCAGGCCTaGACACCATGGTCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLRPKQA*TPWSAQ
Trigger: CTGGGCTGACCATGGTGTGCAGGCCTGCTTTGGCCG...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACAGCTTCATGCTCTCATaGATGCGGTTCATCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHSFMLS*MRFISS
Trigger: CGAGGAGATGAACCGCATGCATGAGAGCATGAAGCT...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp GGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCGTCTCACGCTTCTTGTaGTTTTTCCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GTGQEAPCKHLDLGWGRGVSRFL*FFLWGL
Trigger: GAGGCCCCAAAGGAAAAAGCACAAGAAGCGTGAGAC...GCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACGTCTCACGCTTCTTGTaGTTTTTCCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHVSRFL*FFLWGL
Trigger: GAGGCCCCAAAGGAAAAAGCACAAGAAGCGTGAGAC...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTGGCGTCGTCCGCTCTaGAGGGGTCGGCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFWRRPL*RGRQSR
Trigger: TCGACTTTGCCGACCCCTCCAGAGCGGACGACGCCA...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACGCACATCTTGCTGTGTaGGGATGTAGTCACTCTGTG +
Preference number: 4 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHAHLAV*GCSHSV
Trigger: CACAGAGTGACTACATCCCCACACAGCAAGATGTGC...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTGGCAGGGGCTGGTGTTaGGCAAAGCTGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLGRGWC*AKLGVQ
Trigger: CTGGACCCCCAGCTTTGCCCAACACCAGCCCCTGCC...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGGCAGGGGCTGGTGTTaGGCAAAGCTGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLGRGWC*AKLGVQ
Trigger: CTGGACCCCCAGCTTTGCCCAACACCAGCCCCTGCC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCGGCAGGGGCTGGTGTTaGGCAAAGCTGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSGRGWC*AKLGVQ
Trigger: CTGGACCCCCAGCTTTGCCCAACACCAGCCCCTGCC...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTGGTTTCCAGGAATGGTaGCGTCTCACGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAGFQEW*RLTLLV
Trigger: CACAAGAAGCGTGAGACGCCACCATTCCTGGAAACC...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGGTTTCCAGGAATGGTaGCGTCTCACGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGGFQEW*RLTLLV
Trigger: CACAAGAAGCGTGAGACGCCACCATTCCTGGAAACC...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTGTGGTTTCCAGGAATaGTGGCGTCTCACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GTGQEAPCKHLDLGWGRGCGFQE*WRLTLL
Trigger: AAGAAGCGTGAGACGCCACCATTCCTGGAAACCACA...GCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCGTCTGGAACAGCCCTTaGAACCCAATTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGVWNSP*NPILWR
Trigger: CCTCCACAGAATTGGGTTCCAAGGGCTGTTCCAGAC...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGTCTGGAACAGCCCTTaGAACCCAATTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGVWNSP*NPILWR
Trigger: CCTCCACAGAATTGGGTTCCAAGGGCTGTTCCAGAC...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTAGTCAATGGCGGGTCTaGGGGTCCGGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLSQWRV*GSGLFL
Trigger: GAGGAAGAGGCCGGACCCCCAGACCCGCCATTGACT...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR TCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCAGAGGAGGCATGACTTaGCCCCATGCCCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSRGGMT*PHAHQA
Trigger: GGCCTGGTGGGCATGGGGTCAAGTCATGCCTCCTCT...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266027.9
CDS-3UTR TCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGTCACAGTCATCAGTaGGGTACATCGTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGSHSHQ*GTSWAS
Trigger: AGATGCCCACGATGTACCTCACTGATGACTGTGACT...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266027.9
CDS-3UTR TCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCTCAGGGGACTGTGTGTaGTCTTCTCCTCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGSGDCV*SSPQTG
Trigger: ACCTGTTTGAGGAGAAGATCACACACAGTCCCCTGA...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCGGAAGTGTTCAACGCTaGAGGCCCCGGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLGSVQR*RPRAWD
Trigger: GTCCCAGGCCCGGGGCCTTCAGCGTTGAACACTTCC...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGCATGACTTGACCCCATaGCCACCAGGCCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLHDLTP*PPGPAP
Trigger: CGGTGCTGGGCCTGGTGGGCATGGGGTCAAGTCATG...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266027.9
CDS-3UTR GCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTACAACCGCCCGGTACTaGCGGCATTCCTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLTTARY*RHSSSE
Trigger: CTCCGAGGAGGAATGCCGGCAGTACCGGGCGGTTGT...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCACAACCGCCCGGTACTaGCGGCATTCCTCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSTTARY*RHSSSE
Trigger: CTCCGAGGAGGAATGCCGGCAGTACCGGGCGGTTGT...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCGACAGTGCAAATAGCTaGCTGGCGTCGTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRDSANS*LASSAL
Trigger: CAGAGCGGACGACGCCAGGCAGCTATTTGCACTGTC...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTAGCTTCATGCTCTCATaGATGCGGTTCATCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGASFMLS*MRFISS
Trigger: CGAGGAGATGAACCGCATGCATGAGAGCATGAAGCT...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTGTCTCACGCTTCTTGTaGTTTTTCCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAVSRFL*FFLWGL
Trigger: GAGGCCCCAAAGGAAAAAGCACAAGAAGCGTGAGAC...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGTCTCACGCTTCTTGTaGTTTTTCCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGVSRFL*FFLWGL
Trigger: GAGGCCCCAAAGGAAAAAGCACAAGAAGCGTGAGAC...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTGTCTGGCTGGCTCCCTaGAGTACACACCTGCGCCGA +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLVWLAP*STHLRR
Trigger: TCGGCGCAGGTGTGTACTGCAGGGAGCCAGCCAGAC...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR GCA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTGCTCCGCATCGCCCATaGCAGCCTAGGGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRAPHRP*QPRAAA
Trigger: CGCAGCGGCCCTAGGCTGGCATGGGCGATGCGGAGC...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGGCGTCGTCCGCTCTaGAGGGGTCGGCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLWRRPL*RGRQSR
Trigger: TCGACTTTGCCGACCCCTCCAGAGCGGACGACGCCA...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGTGCAAATAGCTGCCTaGCGTCGTCCGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLVQIAA*RRPLWR
Trigger: CCTCCAGAGCGGACGACGCCAGGCAGCTATTTGCAC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCTGTGGTTTCCAGGAATaGTGGCGTCTCACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGCGFQE*WRLTLL
Trigger: AAGAAGCGTGAGACGCCACCATTCCTGGAAACCACA...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCTCGACCGCACGGCCATaGGTACCGACCATCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLSTARP*VPTIPA
Trigger: GGCTGGGATGGTCGGTACCCATGGCCGTGCGGTCGA...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR TCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCGAGCTGGTATTCCCTTaGGCGGCCAAAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSELVFP*AAKAGL
Trigger: CAGGCCTGCTTTGGCCGCTCAAGGGAATACCAGCTC...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCAGGCAGCTGAGTCGTTaGGCTGGTATTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRRQLSR*AGIPLS
Trigger: GCTCAAGGGAATACCAGCTCAACGACTCAGCTGCCT...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTTCACACCCTCCGTCATaGGACGCTCCCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLSHPPS*DAPSFS
Trigger: CGAGAAGGAGGGAGCGTCTCATGACGGAGGGTGTGA...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR GCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCGACAGTGCAAATAGCTaGCTGGCGTCGTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFDSANS*LASSAL
Trigger: CAGAGCGGACGACGCCAGGCAGCTATTTGCACTGTC...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTGATGTAGTCACTCTGTaGAATACGCTCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGADVVTL*NTLQVV
Trigger: AACGACCTGGAGCGTATTGCACAGAGTGACTACATC...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCGATGTAGTCACTCTGTaGAATACGCTCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGDVVTL*NTLQVV
Trigger: AACGACCTGGAGCGTATTGCACAGAGTGACTACATC...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCCCTCATCATATTTGTTaGCCCCTGTGTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGPHHIC*PLCTQG
Trigger: TCCCTGAGTACACAGGGGCCAACAAATATGATGAGG...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGCCTCATCATATTTGTTaGCCCCTGTGTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGPHHIC*PLCTQG
Trigger: TCCCTGAGTACACAGGGGCCAACAAATATGATGAGG...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTGTGCTTTTTCCTTTaGGGCCTCCGAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLLCFFL*GLRAAG
Trigger: CCCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAA...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGACGAGAATGAGCAGGTaGACTGTGGTTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGTRMSR*TVVSRN
Trigger: ATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCAGGCAGCTGAGTCGTTaGGCTGGTATTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFRQLSR*AGIPLS
Trigger: GCTCAAGGGAATACCAGCTCAACGACTCAGCTGCCT...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGAAAAAGCTACGAGAATaGGCAGGTGGACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGKKLRE*AGGLWF
Trigger: AAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTT...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAAAAAGCTACGAGAATaGGCAGGTGGACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGKKLRE*AGGLWF
Trigger: AAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTT...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTACCTCGCCTGCTTCCTaGGGGCGGAGTAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRTSPAS*GRSSSA
Trigger: TGCGGAGCTACTCCGCCCTCAGGAAGCAGGCGAGGT...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR TCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCTCACACCCTCCGTCATaGGACGCTCCCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLSHPPS*DAPSFS
Trigger: CGAGAAGGAGGGAGCGTCTCATGACGGAGGGTGTGA...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR TCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTTCTTCTCCCCACACTaGGCCTTAGCAACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLFFSPH*ALATRG
Trigger: GCCCCTGGTTGCTAAGGCTCAGTGTGGGGAGAAGAA...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446079.5
CDS-3UTR GCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGACAGTGCAAATAGCTaGCTGGCGTCGTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLDSANS*LASSAL
Trigger: CAGAGCGGACGACGCCAGGCAGCTATTTGCACTGTC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCCTTGCTCCTCGGCGGTaGAGGACAGTGCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFLAPRR*RTVQIA
Trigger: AGCTATTTGCACTGTCCTGCACCGCCGAGGAGCAAG...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTTCAGGGAGCACGCCTTaGTCCTCGGCGGTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRSGSTP*SSAVQD
Trigger: GTCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGA...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCTGTGCAGCTGGTGCATaGCAATATGGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSCAAGA*QYGALG
Trigger: GCCCAGGGCACCATATTGGCATGCACCAGCTGCACA...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446079.5
CDS-3UTR CCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCTCTCCACGATCCCCGTaGTCTTTACGCGGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSSPRSP*SLRGSV
Trigger: TACGGACCCGCGTAAAGACCACGGGGATCGTGGAGA...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTTCTCCACGATCCCCGTaGTCTTTACGCGGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLSPRSP*SLRGSV
Trigger: TACGGACCCGCGTAAAGACCACGGGGATCGTGGAGA...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCTTGTGCTTTTTCCTTTaGGGCCTCCGAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSLCFFL*GLRAAG
Trigger: CCCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAA...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCAGGCAGCTGAGTCGTTaGGCTGGTATTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSRQLSR*AGIPLS
Trigger: GCTCAAGGGAATACCAGCTCAACGACTCAGCTGCCT...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTCAGGTAGTAGGCAGCTaGGTCGTTGAGCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLQVVGS*VVELVF
Trigger: GAATACCAGCTCAACGACTCAGCTGCCTACTACCTG...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCCAGGTAGTAGGCAGCTaGGTCGTTGAGCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFQVVGS*VVELVF
Trigger: GAATACCAGCTCAACGACTCAGCTGCCTACTACCTG...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCAGCCATCCTCGTGGATaGTCCCAACAGCAGCAACTT +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFSHPRG*SQQQQL
Trigger: AAGTTGCTGCTGTTGGGATCATCCACGAGGATGGCT...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441156.5
CDS-3UTR GCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTCGGCAAAGTCGATCTaGAGGTTGCCCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLSAKSI*RLPMAL
Trigger: CAAAGCCATGGGCAACCTGCAGATCGACTTTGCCGA...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCCTTGCTCCTCGGCGGTaGAGGACAGTGCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSLAPRR*RTVQIA
Trigger: AGCTATTTGCACTGTCCTGCACCGCCGAGGAGCAAG...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCAGCTTCATGCTCTCATaGATGCGGTTCATCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRSFMLS*MRFISS
Trigger: CGAGGAGATGAACCGCATGCATGAGAGCATGAAGCT...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCTATCGAATAGCTTCATaGTCTCATGCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGYRIAS*SHACGS
Trigger: TGAACCGCATGCATGAGAGCATGAAGCTATTCGATA...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACACTTGTTGTTGCAGATaGTATCGAATAGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHTCCCR*YRIASC
Trigger: GCATGAAGCTATTCGATAGCATCTGCAACAACAAGT...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR GCA 90 bp GGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCACTTGTTGTTGCAGATaGTATCGAATAGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: GTGQEAPCKHLDLGWGRGTCCCR*YRIASC
Trigger: GCATGAAGCTATTCGATAGCATCTGCAACAACAAGT...GCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGTAAACATTTGGACTTaGGCTGGGGCAGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLVNIWT*AGAGAG
Trigger: ACCAGCCCCTGCCCCAGCCCAAGTCCAAATGTTTAC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTGTAAACATTTGGACTTaGGCTGGGGCAGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLVNIWT*AGAGAG
Trigger: ACCAGCCCCTGCCCCAGCCCAAGTCCAAATGTTTAC...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCTGGTGCATGCCAATATaGTGCCCTGGGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLWCMPI*CPGQSW
Trigger: CCAGCTCTGCCCAGGGCACCATATTGGCATGCACCA...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446079.5
CDS-3UTR TCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCCAGGTAGTAGGCAGCTaGGTCGTTGAGCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSQVVGS*VVELVF
Trigger: GAATACCAGCTCAACGACTCAGCTGCCTACTACCTG...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTCAGGGGACTGTGTGTaGTCTTCTCCTCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLSGDCV*SSPQTG
Trigger: ACCTGTTTGAGGAGAAGATCACACACAGTCCCCTGA...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCTCGGCAAAGTCGATCTaGAGGTTGCCCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSSAKSI*RLPMAL
Trigger: CAAAGCCATGGGCAACCTGCAGATCGACTTTGCCGA...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCAGCTTCATGCTCTCATaGATGCGGTTCATCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFSFMLS*MRFISS
Trigger: CGAGGAGATGAACCGCATGCATGAGAGCATGAAGCT...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCGAACTGGGTAAAATTTaGTCTCAGAGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRELGKI*SQRLTP
Trigger: AGGCGTGAGCCTCTGAGAGCAAATTTTACCCAGTTC...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR GCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGAGCTGGCAGGAAGATaGCCTGCATACTCCATCCAA +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLELAGR*PAYSIQ
Trigger: TTGGATGGAGTATGCAGGGCATCTTCCTGCCAGCTC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446079.5
CDS-3UTR GCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACTCCCCAGCACCTGTaGAGCTGGTGCATGCCAATA +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLTPQHL*SWCMPI
Trigger: TATTGGCATGCACCAGCTGCACAGGTGCTGGGGAGT...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446079.5
CDS-3UTR CCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGCACATCTTGCTGTGTaGGGATGTAGTCACTCTGTG +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLAHLAV*GCSHSV
Trigger: CACAGAGTGACTACATCCCCACACAGCAAGATGTGC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTGGTTTCCAGGAATGGTaGCGTCTCACGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLGFQEW*RLTLLV
Trigger: CACAAGAAGCGTGAGACGCCACCATTCCTGGAAACC...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGGTTTCCAGGAATGGTaGCGTCTCACGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLGFQEW*RLTLLV
Trigger: CACAAGAAGCGTGAGACGCCACCATTCCTGGAAACC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTGTGGTTTCCAGGAATaGTGGCGTCTCACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFCGFQE*WRLTLL
Trigger: AAGAAGCGTGAGACGCCACCATTCCTGGAAACCACA...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCCAGGTAGTAGGCAGCTaGGTCGTTGAGCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLQVVGS*VVELVF
Trigger: GAATACCAGCTCAACGACTCAGCTGCCTACTACCTG...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTTCAGGGGACTGTGTGTaGTCTTCTCCTCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLSGDCV*SSPQTG
Trigger: ACCTGTTTGAGGAGAAGATCACACACAGTCCCCTGA...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCTCGGCAAAGTCGATCTaGAGGTTGCCCATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLSAKSI*RLPMAL
Trigger: CAAAGCCATGGGCAACCTGCAGATCGACTTTGCCGA...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGAACTGGGTAAAATTTaGTCTCAGAGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLELGKI*SQRLTP
Trigger: AGGCGTGAGCCTCTGAGAGCAAATTTTACCCAGTTC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGCACATCTTGCTGTGTaGGGATGTAGTCACTCTGTG +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLAHLAV*GCSHSV
Trigger: CACAGAGTGACTACATCCCCACACAGCAAGATGTGC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCCCTCATCATATTTGTTaGCCCCTGTGTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFPHHIC*PLCTQG
Trigger: TCCCTGAGTACACAGGGGCCAACAAATATGATGAGG...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACCACAGAACAAGACAATaGTTAAAAACCAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHHRTRQ*LKTRTD
Trigger: ATCTGTTCTGGTTTTTAACCATTGTCTTGTTCTGTG...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTTGTGGTTTCCAGGAATaGTGGCGTCTCACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLCGFQE*WRLTLL
Trigger: AAGAAGCGTGAGACGCCACCATTCCTGGAAACCACA...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCACGAGAATGAGCAGGTaGACTGTGGTTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFTRMSR*TVVSRN
Trigger: ATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR TCA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTAAAAAGCTACGAGAATaGGCAGGTGGACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLKKLRE*AGGLWF
Trigger: AAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTT...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTTGCTCCTCGGCGGTaGAGGACAGTGCAAATAGCT +
Preference number: 4 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRLAPRR*RTVQIA
Trigger: AGCTATTTGCACTGTCCTGCACCGCCGAGGAGCAAG...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTGATGTAGTCACTCTGTaGAATACGCTCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLDVVTL*NTLQVV
Trigger: AACGACCTGGAGCGTATTGCACAGAGTGACTACATC...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTTTCTTCCCACGGATCTaGCAGGAAGCCTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRFFPRI*QEAFQD
Trigger: GTCCTGGAAGGCTTCCTGGCAGATCCGTGGGAAGAA...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR CCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCCTCATCATATTTGTTaGCCCCTGTGTACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLPHHIC*PLCTQG
Trigger: TCCCTGAGTACACAGGGGCCAACAAATATGATGAGG...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGACGAGAATGAGCAGGTaGACTGTGGTTTCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLTRMSR*TVVSRN
Trigger: ATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCAGCACCTGTGCAGCTaGTGCATGCCAATATGGTGC +
Preference number: 4 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRQHLCS*CMPIWC
Trigger: GCACCATATTGGCATGCACCAGCTGCACAGGTGCTG...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446079.5
CDS-3UTR TCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGAAAAAGCTACGAGAATaGGCAGGTGGACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLKKLRE*AGGLWF
Trigger: AAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTT...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCGATGTAGTCACTCTGTaGAATACGCTCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLDVVTL*NTLQVV
Trigger: AACGACCTGGAGCGTATTGCACAGAGTGACTACATC...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTATCGAATAGCTTCATaGTCTCATGCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFYRIAS*SHACGS
Trigger: TGAACCGCATGCATGAGAGCATGAAGCTATTCGATA...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTATCGAATAGCTTCATaGTCTCATGCATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLYRIAS*SHACGS
Trigger: TGAACCGCATGCATGAGAGCATGAAGCTATTCGATA...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCACTTGTTGTTGCAGATaGTATCGAATAGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFTCCCR*YRIASC
Trigger: GCATGAAGCTATTCGATAGCATCTGCAACAACAAGT...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTGTCTCACGCTTCTTGTaGTTTTTCCTTTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRVSRFL*FFLWGL
Trigger: GAGGCCCCAAAGGAAAAAGCACAAGAAGCGTGAGAC...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTACTTGTTGTTGCAGATaGTATCGAATAGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLTCCCR*YRIASC
Trigger: GCATGAAGCTATTCGATAGCATCTGCAACAACAAGT...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR GCA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCACTTGTTGTTGCAGATaGTATCGAATAGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: GGLWFPGMVASHASCAFSTCCCR*YRIASC
Trigger: GCATGAAGCTATTCGATAGCATCTGCAACAACAAGT...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CCA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCCACAGAACAAGACAATaGTTAAAAACCAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFHRTRQ*LKTRTD
Trigger: ATCTGTTCTGGTTTTTAACCATTGTCTTGTTCTGTG...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS TCA 90 bp TCTGGCTGGCTCCCTGCAGTACACACCTGCGCCGATGCCCAGCGTTaGGGCCCTACCCATCCCGGGGGACCTTTCCCCTCCCGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: SGWLPAVHTCADAQR*GPTHPGGPFPSRLP
Trigger: CGGGAGGCGGGAGGGGAAAGGTCCCCCGGGATGGGTAGGGCCTCAACGCTGGGCATCGGCGCAGGTGTGTACTGCAGGGAGCCAGCCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR CAA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGAGGAGGCATGACTaGACCCCATGCCCACCAGGC +
Preference number: 5 (lower is better)
Translates to: GRGAARTGAASRGTGVNTQRRHD*TPCPPG
Trigger: GCCTGGTGGGCATGGGGTCAAGTCATGCCTCCTCTG...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266027.9
CDS TCA 90 bp GGCCAAAGCAGGCCTGCACACCATGGTCAGCCCAGAGCCTCCGGATaGCGCCGGACAGGTCATCAGGGAGCACGCCTTGCTCCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: GQSRPAHHGQPRASG*RRTGHQGARLAPRR
Trigger: CCGCCGAGGAGCAAGGCGTGCTCCCTGATGACCTGTCCGGCGTCATCCGGAGGCTCTGGGCTGACCATGGTGTGCAGGCCTGCTTTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000440628.5
ENST00000441156.5
ENST00000446079.5
ENST00000451956.1
ENST00000490122.5
ENST00000491100.5
CDS GCA 90 bp CAGAGCCTCCGGATGACGCCGGACAGGTCATCAGGGAGCACGCCTTaGTCCTCGGCGGTGCAGGACAGTGCAAATAGCTGCCTGGCGTCG +
Preference number: 5 (lower is better)
Translates to: QSLRMTPDRSSGSTP*SSAVQDSANSCLAS
Trigger: CGACGCCAGGCAGCTATTTGCACTGTCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGATGACCTGTCCGGCGTCATCCGGAGGCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000440628.5
ENST00000441156.5
ENST00000446079.5
ENST00000451956.1
ENST00000490122.5
ENST00000491100.5
CDS CCA 90 bp AGTAACTGCAATCGCCTGGGGAGAGGCTGTCTAGAGACTCCTGGCTaGGCACTGGGAGGCAGCGGTACCGGAAGTGCCCTCCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SNCNRLGRGCLETPG*ALGGSGTGSALPRP
Trigger: GGGCCTGGGGAGGGCACTTCCGGTACCGCTGCCTCCCAGTGCCCAGCCAGGAGTCTCTAGACAGCCTCTCCCCAGGCGATTGCAGTTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440628.5
CDS-3UTR CAA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACATCAGGGAGCACGCCTaGCTCCTCGGCGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHIREHA*LLGGAG
Trigger: TCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGAT...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS GCA 90 bp CCCCTCCCGCCTCCCGCCCTTCTGTCGGCTTTCTTCCCACGGATCTaGCAGGAAGCCTTCCAGGACTGTCCTGGAGCATCAAGGCTCGAC +
Preference number: 5 (lower is better)
Translates to: PLPPPALLSAFFPRI*QEAFQDCPGASRLD
Trigger: GTCGAGCCTTGATGCTCCAGGACAGTCCTGGAAGGCTTCCTGGCAGATCCGTGGGAAGAAAGCCGACAGAAGGGCGGGAGGCGGGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS-3UTR CAA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGAAGTCGATCTGCAGGTaGCCCATGGCTTTGACAATG +
Preference number: 5 (lower is better)
Translates to: GRGAARTGAASRGTGVNTKSICR*PMALTM
Trigger: CATTGTCAAAGCCATGGGCAACCTGCAGATCGACTT...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CAA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGATCAGGGAGCACGCCTaGCTCCTCGGCGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGIREHA*LLGGAG
Trigger: TCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGAT...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACAGCTCCCTGTAAACATTaGGACTTGGGCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTAPCKH*DLGWGR
Trigger: CCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGC...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS TCA 90 bp CAGCAGGCAGGCTGCAGCCACATCAGGCAGGAGCAGCAGAGGCTGTaGGCAGCTGGCAGAGGTGGCGTGGATCCTGACTGCTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: QQAGCSHIRQEQQRL*AAGRGGVDPDCWFT
Trigger: AGTGAACCAGCAGTCAGGATCCACGCCACCTCTGCCAGCTGCTCACAGCCTCTGCTGCTCCTGCCTGATGTGGCTGCAGCCTGCCTGCTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS CCA 90 bp GAGGCAGCTGGGCCTGGTGGGCAGTTGAGCTACCAGGAATGCAGCTaGCAGGGCCACAGTGGTCAAGGTAACCTAGAGCACCTGTGCCCC +
Preference number: 5 (lower is better)
Translates to: EAAGPGGQLSYQECS*QGHSGQGNLEHLCP
Trigger: GGGGCACAGGTGCTCTAGGTTACCTTGACCACTGTGGCCCTGCCAGCTGCATTCCTGGTAGCTCAACTGCCCACCAGGCCCAGCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS-3UTR CAA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGTTGAAGTGTAGGTCCTaGAAGGTGAAGTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GRGAARTGAASRGTGVNTLKCRS*KVKCVS
Trigger: GGAGACACACTTCACCTTCAAGGACCTACACTTCAA...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS TCA 90 bp CCTGTAGCCCAGGAGGCAGAACTAACCTTCCCACCAGCTGCACCGTaGGATGGAGGCAGCTGGGCCTGGTGGGCAGTTGAGCTACCAGGA +
Preference number: 5 (lower is better)
Translates to: PVAQEAELTFPPAAP*DGGSWAWWAVELPG
Trigger: TCCTGGTAGCTCAACTGCCCACCAGGCCCAGCTGCCTCCATCTCACGGTGCAGCTGGTGGGAAGGTTAGTTCTGCCTCCTGGGCTACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS GCA 90 bp CGGGAGGCATTCTTCGGCAGGCAGCCATCCTGGACTCCAATCCCTTaGTTTGCAGCTGAGTCAGCTGAGGTCCAGAGTGGGCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: REAFFGRQPSWTPIP*FAAESAEVQSGPGA
Trigger: GGCTCCTGGCCCACTCTGGACCTCAGCTGACTCAGCTGCAAAGCAAGGGATTGGAGTCCAGGATGGCTGCCTGCCGAAGAATGCCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480090.1
CDS-3UTR CAA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACTCAGGAGAGTTCATTTaGGGGGCAGAGGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHSGEFI*GAEGSC
Trigger: GCAGCTGCCCTCTGCCCCCAAAATGAACTCTCCTGA...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000266027.9
CDS-3UTR CAA 90 bp GGCAGGGGTGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCCCACATCAAACATCTaGAAGTGTAGGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GRGAARTGAASRGTGVNTPTSNI*KCRSLK
Trigger: CTTCAAGGACCTACACTTCAAGATGTTTGATGTGGG...CGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCACCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CAA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCCTTGTGCTTTTTCCTTaGGGGCCTCCGAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGLVLFP*GPPSGW
Trigger: CCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAAG...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTGGGCCCTCAGTGACGTaGGCAGTTGTCTGGAACAGC +
Preference number: 5 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAGPSVT*AVVWNS
Trigger: GCTGTTCCAGACAACTGCCAACGTCACTGAGGGCCC...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS TCA 90 bp CATCGCCCATGCCAGCCTAGGGCCGCTGCGCCGTGGGGGCTCGGATaGCTTGCTGAGTTTGATTTCAGAGTCATCGGGAGGATAGAGAGG +
Preference number: 5 (lower is better)
Translates to: HRPCQPRAAAPWGLG*LAEFDFRVIGRIER
Trigger: CCTCTCTATCCTCCCGATGACTCTGAAATCAAACTCAGCAAGTCATCCGAGCCCCCACGGCGCAGCGGCCCTAGGCTGGCATGGGCGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS GCA 90 bp TGCAGCTGGCAGGGCCACAGTGGTCAAGGTAACCTAGAGCACCTGTaGCCCATGGCAGACTCTCTGCAGGCCTTTGCCTCCCACAAGCTC +
Preference number: 5 (lower is better)
Translates to: CSWQGHSGQGNLEHL*PMADSLQAFASHKL
Trigger: GAGCTTGTGGGAGGCAAAGGCCTGCAGAGAGTCTGCCATGGGGCACAGGTGCTCTAGGTTACCTTGACCACTGTGGCCCTGCCAGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS CCA 90 bp TCAGGCAGGAGCAGCAGAGGCTGTGAGCAGCTGGCAGAGGTGGCGTaGATCCTGACTGCTGGTTCACTAGGTGGTGAGGATGTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SGRSSRGCEQLAEVA*ILTAGSLGGEDVLA
Trigger: GGCAAGCACATCCTCACCACCTAGTGAACCAGCAGTCAGGATCCACGCCACCTCTGCCAGCTGCTCACAGCCTCTGCTGCTCCTGCCTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS CCA 90 bp CTGACCCACTGGGACCTGAGGGTCCTTCTGCTTCTCAGAAGATTCTaGGCCTGGCTAAGACTGGCTGGGCCTGTAGTCGGGGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: LTHWDLRVLLLLRRF*AWLRLAGPVVGGSA
Trigger: TGCACTGCCCCCGACTACAGGCCCAGCCAGTCTTAGCCAGGCCCAGAATCTTCTGAGAAGCAGAAGGACCCTCAGGTCCCAGTGGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS-3UTR CAA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCGCTCCCTGTAAACATTaGGACTTGGGCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGAPCKH*DLGWGR
Trigger: CCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGC...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCGGCGTCTCACGCTTCTaGTGCTTTTTCCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GTGQEAPCKHLDLGWGRGGVSRF*CFFLWG
Trigger: GCCCCAAAGGAAAAAGCACAAGAAGCGTGAGACGCC...GCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp ACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACACTCAAGGCACTCCTCCCGCAGGTTCTaGTCGATCATCTTAGAGCGC +
Preference number: 5 (lower is better)
Translates to: TGAASRGTGVNTQTHSRHSSRRF*SIILER
Trigger: GCGCTCTAAGATGATCGACAAGAACCTGCGGGAGGA...GTGCCTTGAGTGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CAA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCCGCCGATGCCCAGCGTaGAGGCCCTACCCATCCCGG +
Preference number: 5 (lower is better)
Translates to: GGLWFPGMVASHASCAFSRRCPA*RPYPSR
Trigger: CCGGGATGGGTAGGGCCTCAACGCTGGGCATCGGCG...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS GCA 90 bp TGGACATGGCCCAATGCCCCGCCCTCTGCTCACTGCGCTCAGGTCTaGCCTGAGCAGATGGAGGCTAGAAGGCTAGAATCTAGGAGACCT +
Preference number: 5 (lower is better)
Translates to: WTWPNAPPSAHCAQV*PEQMEARRLESRRP
Trigger: AGGTCTCCTAGATTCTAGCCTTCTAGCCTCCATCTGCTCAGGGCAGACCTGAGCGCAGTGAGCAGAGGGCGGGGCATTGGGCCATGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS-3UTR CAA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTATCAGGGAGCACGCCTaGCTCCTCGGCGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLIREHA*LLGGAG
Trigger: TCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGAT...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp TGCCGCTCGCACGGGGGCGGCCAGCAGAGGGACGGGTGTAAACACGCAGACACATTGAAGTGTAGGTCCTaGAAGGTGAAGTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: CRSHGGGQQRDGCKHADTLKCRS*KVKCVS
Trigger: GGAGACACACTTCACCTTCAAGGACCTACACTTCAA...TGTGTCTGCGTGTTTACACCCGTCCCTCTGCTGGCCGCCCCCGTGCGAGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CAA 90 bp GGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCGCCTCATCATATTTGTaGGCCCCTGTGTACTCAGGG +
Preference number: 5 (lower is better)
Translates to: GTGQEAPCKHLDLGWGRGASSYL*APVYSG
Trigger: CCCTGAGTACACAGGGGCCAACAAATATGATGAGGC...GCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GGGGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGGCGTCTCACGCTTCTaGTGCTTTTTCCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GVGGLGRRLPVNIWTWAGGVSRF*CFFLWG
Trigger: GCCCCAAAGGAAAAAGCACAAGAAGCGTGAGACGCC...CCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCGGCGTCTCACGCTTCTaGTGCTTTTTCCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGGVSRF*CFFLWG
Trigger: GCCCCAAAGGAAAAAGCACAAGAAGCGTGAGACGCC...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTGTCTGGAACAGCCCTaGGAACCCAATTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: GTGQEAPCKHLDLGWGRGCLEQP*EPNSVE
Trigger: CTCCACAGAATTGGGTTCCAAGGGCTGTTCCAGACA...GCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CAA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCTCCTCCCGCAGGTTCTaGTCGATCATCTTAGAGCGC +
Preference number: 5 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGSSRRF*SIILER
Trigger: GCGCTCTAAGATGATCGACAAGAACCTGCGGGAGGA...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313601.11
ENST00000441156.5
CDS TCA 90 bp GGAGCCTGGGGGAGGCTTTCTACCCCATTTCTCAGGTTGGCTGACTaGGGACAGAGGCCTGCCCAGAGTAGGGCAGCTACCTTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: GAWGRLSTPFLRLAD*GQRPAQSRAATFWN
Trigger: ATTCCAGAAGGTAGCTGCCCTACTCTGGGCAGGCCTCTGTCCTCAGTCAGCCAACCTGAGAAATGGGGTAGAAAGCCTCCCCCAGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS TCA 90 bp AGGCCTGCTTGTATGACCTCCTCCATGCCCTGCACCTCACTCACTTaGCCTCCTGATTCACACCCTGGGCCTTCTCCTCCCTTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: RPACMTSSMPCTSLT*PPDSHPGPSPPLSP
Trigger: AGGGGACAAGGGAGGAGAAGGCCCAGGGTGTGAATCAGGAGGTCAAGTGAGTGAGGTGCAGGGCATGGAGGAGGTCATACAAGCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492383.1
CDS TCA 90 bp CCCAGAGTTCAGGATCCTGACCACCCTACCTCCACGGCTCCCAGATaGCAGGGAGTCCCTGGCCAAGGACCTGTGACCAACTCAATCACA +
Preference number: 5 (lower is better)
Translates to: PRVQDPDHPTSTAPR*QGVPGQGPVTNSIT
Trigger: TGTGATTGAGTTGGTCACAGGTCCTTGGCCAGGGACTCCCTGTCATCTGGGAGCCGTGGAGGTAGGGTGGTCAGGATCCTGAACTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS GCA 90 bp ACTTCAGCTTTCTGGACATGGCCCAATGCCCCGCCCTCTGCTCACTaGGCTCAGGTCTGCCCTGAGCAGATGGAGGCTAGAAGGCTAGAA +
Preference number: 5 (lower is better)
Translates to: TSAFWTWPNAPPSAH*AQVCPEQMEARRLE
Trigger: TTCTAGCCTTCTAGCCTCCATCTGCTCAGGGCAGACCTGAGCGCAGTGAGCAGAGGGCGGGGCATTGGGCCATGTCCAGAAAGCTGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS CCA 90 bp CTCTCAGAACACATAGTCAATGGCGGACATAGTCAATGGCGGGTCTaGGGGTCCGGCCTCTTCCTCTACTCCGGGCTTCCCCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LSEHIVNGGHSQWRV*GSGLFLYSGLPPRS
Trigger: TGACCTTGGGGGAAGCCCGGAGTAGAGGAAGAGGCCGGACCCCCAGACCCGCCATTGACTATGTCCGCCATTGACTATGTGTTCTGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS CCA 90 bp CCTTCCCCAATCTACCGGGAGGCATTCTTCGGCAGGCAGCCATCCTaGACTCCAATCCCTTGCTTTGCAGCTGAGTCAGCTGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: PSPIYREAFFGRQPS*TPIPCFAAESAEVQ
Trigger: CTGGACCTCAGCTGACTCAGCTGCAAAGCAAGGGATTGGAGTCCAGGATGGCTGCCTGCCGAAGAATGCCTCCCGGTAGATTGGGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480090.1
CDS-3UTR CAA 90 bp TACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTATCAGGGAGCACGCCTaGCTCCTCGGCGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: YENEQVDCGFQEWWRLTLIREHA*LLGGAG
Trigger: TCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGAT...AAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCTGTCTGGAACAGCCCTaGGAACCCAATTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGCLEQP*EPNSVE
Trigger: CTCCACAGAATTGGGTTCCAAGGGCTGTTCCAGACA...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CAA 90 bp GGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAGGGGCTGGGGGCTCGGATGACTaGCTGAGTTTGATTTCAGAG +
Preference number: 5 (lower is better)
Translates to: GLGRRLPVNIWTWAGAGAGGSDD*LSLISE
Trigger: CTCTGAAATCAAACTCAGCAAGTCATCCGAGCCCCC...AGCCCCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS TCA 90 bp CGCCTTTCTGCTTCGTCCAGCCTAGCGTCTTCACACCCTCCGTCATaGGACGCTCCCTCCTTCTCGCGCTTCCACTTCACAGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: RLSASSSLASSHPPS*DAPSFSRFHFTAEI
Trigger: AATCTCTGCTGTGAAGTGGAAGCGCGAGAAGGAGGGAGCGTCTCATGACGGAGGGTGTGAAGACGCTAGGCTGGACGAAGCAGAAAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS TCA 90 bp TTGTATGACCTCCTCCATGCCCTGCACCTCACTCACTTGACCTCCTaGTTCACACCCTGGGCCTTCTCCTCCCTTGTCCCCTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: LYDLLHALHLTHLTS*FTPWAFSSLVPWSP
Trigger: AGGTGACCAGGGGACAAGGGAGGAGAAGGCCCAGGGTGTGAATCAGGAGGTCAAGTGAGTGAGGTGCAGGGCATGGAGGAGGTCATACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492383.1
CDS GCA 90 bp CAGCTCTATGGTCCAGTCTTGCATTTCCTCGGCCACCACAGTAACTaGAATCGCCTGGGGAGAGGCTGTCTAGAGACTCCTGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QLYGPVLHFLGHHSN*NRLGRGCLETPGWA
Trigger: TGCCCAGCCAGGAGTCTCTAGACAGCCTCTCCCCAGGCGATTGCAGTTACTGTGGTGGCCGAGGAAATGCAAGACTGGACCATAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440628.5
CDS GCA 90 bp GCTACTGCTTGTAGACCTCGTGGCTACAGCTTGCTCCCGCCTTACTaGCCTGGGGCAGGTTCTACTTCCTGGTTCAACTCCTGCGCTTTC +
Preference number: 5 (lower is better)
Translates to: ATACRPRGYSLLPPY*PGAGSTSWFNSCAF
Trigger: GAAAGCGCAGGAGTTGAACCAGGAAGTAGAACCTGCCCCAGGGCAGTAAGGCGGGAGCAAGCTGTAGCCACGAGGTCTACAAGCAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS GCA 90 bp ATGAAGGAGCCACCCTGTTCTCACATACATAGGCTCGCCAACCTGTaGAGCTGGTGCATGCCAATATGGTGCCCTGGGCAGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: MKEPPCSHIHRLANL*SWCMPIWCPGQSWQ
Trigger: CTGCCAGCTCTGCCCAGGGCACCATATTGGCATGCACCAGCTGCACAGGTTGGCGAGCCTATGTATGTGAGAACAGGGTGGCTCCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS CCA 90 bp TACAGCTTGCTCCCGCCTTACTGCCCTGGGGCAGGTTCTACTTCCTaGTTCAACTCCTGCGCTTTCCCCTTCCTGCTTCTTAGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: YSLLPPYCPGAGSTS*FNSCAFPFLLLSPV
Trigger: CACTGGGCTAAGAAGCAGGAAGGGGAAAGCGCAGGAGTTGAACCAGGAAGTAGAACCTGCCCCAGGGCAGTAAGGCGGGAGCAAGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CCA 90 bp GAGCCACCCTGTTCTCACATACATAGGCTCGCCAACCTGTGCAGCTaGTGCATGCCAATATGGTGCCCTGGGCAGAGCTGGCAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: EPPCSHIHRLANLCS*CMPIWCPGQSWQED
Trigger: ATCTTCCTGCCAGCTCTGCCCAGGGCACCATATTGGCATGCACCAGCTGCACAGGTTGGCGAGCCTATGTATGTGAGAACAGGGTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS-3UTR CAA 90 bp GGTTGGGGGACTGGGCAGGAGGCTCCCTGTAAACATTTGGACTTGGGCTGGGGCAAGTCGATCTGCAGGTaGCCCATGGCTTTGACAATG +
Preference number: 5 (lower is better)
Translates to: GWGTGQEAPCKHLDLGWGKSICR*PMALTM
Trigger: CATTGTCAAAGCCATGGGCAACCTGCAGATCGACTT...GCCCCAGCCCAAGTCCAAATGTTTACAGGGAGCCTCCTGCCCAGTCCCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGGGCCCTCAGTGACGTaGGCAGTTGTCTGGAACAGC +
Preference number: 5 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLGPSVT*AVVWNS
Trigger: GCTGTTCCAGACAACTGCCAACGTCACTGAGGGCCC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS TCA 90 bp AGCCCTACAAACCCAACTGGTTCTGGCATTCAGGGTGTTCCTGTATaGCTGGGGAGGAGCTACCCAAGCCCTGCAGGGAACTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SPTNPTGSGIQGVPV*LGRSYPSPAGNSGA
Trigger: AGCTCCTGAGTTCCCTGCAGGGCTTGGGTAGCTCCTCCCCAGTCATACAGGAACACCCTGAATGCCAGAACCAGTTGGGTTTGTAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS TCA 90 bp TGGCCTGAGTTCCTATCGAGCAGTAGCCCTGAGCAGGTTGAGGAATaGAGACCCTCTCAGTGGGCTGTGACATGCTTGCCTGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: WPEFLSSSSPEQVEE*RPSQWAVTCLPAGS
Trigger: AGAGCCTGCAGGCAAGCATGTCACAGCCCACTGAGAGGGTCTTCATTCCTCAACCTGCTCAGGGCTACTGCTCGATAGGAACTCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CCA 90 bp TGCCCACCAGGCCCAGCACCGCTTGGACTAGACCATAAAGGACAATaGAATGACATCAGCAGAGTTGAGGGTGGCCCCTCAGCTGGAATG +
Preference number: 5 (lower is better)
Translates to: CPPGPAPLGLDHKGQ*NDISRVEGGPSAGM
Trigger: CATTCCAGCTGAGGGGCCACCCTCAACTCTGCTGATGTCATTCCATTGTCCTTTATGGTCTAGTCCAAGCGGTGCTGGGCCTGGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS-3UTR CAA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGCTCCCTGTAAACATTaGGACTTGGGCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLAPCKH*DLGWGR
Trigger: CCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCGGCGTCTCACGCTTCTaGTGCTTTTTCCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRGVSRF*CFFLWG
Trigger: GCCCCAAAGGAAAAAGCACAAGAAGCGTGAGACGCC...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS TCA 90 bp GCTGGCAGAGGTGGCGTGGATCCTGACTGCTGGTTCACTAGGTGGTaGGGATGTGCTTGCCCAGAACACATGAGCCTTGTAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: AGRGGVDPDCWFTRW*GCACPEHMSLVKPQ
Trigger: CTGAGGTTTTACAAGGCTCATGTGTTCTGGGCAAGCACATCCTCACCACCTAGTGAACCAGCAGTCAGGATCCACGCCACCTCTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS TCA 90 bp TCTCCAGGGGATGCTGAGGTAGGGGCACCAACATCTCCAAGCCAGTaGTCCACACCTAGCCCTACAAACCCAACTGGTTCTGGCATTCAG +
Preference number: 5 (lower is better)
Translates to: SPGDAEVGAPTSPSQ*STPSPTNPTGSGIQ
Trigger: CTGAATGCCAGAACCAGTTGGGTTTGTAGGGCTAGGTGTGGATCACTGGCTTGGAGATGTTGGTGCCCCTACCTCAGCATCCCCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CCA 90 bp GGAGCTACCCAAGCCCTGCAGGGAACTCAGGAGCTCTCAGGGCTTTaGGGCCAAGGCCTAAACTTAACCTCCCTCCTTTTCTTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GATQALQGTQELSGL*GQGLNLTSLLFFVL
Trigger: AAGGACAAAGAAAAGGAGGGAGGTTAAGTTTAGGCCTTGGCCCCAAAGCCCTGAGAGCTCCTGAGTTCCCTGCAGGGCTTGGGTAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CCA 90 bp CTACAAACCCAACTGGTTCTGGCATTCAGGGTGTTCCTGTATGACTaGGGAGGAGCTACCCAAGCCCTGCAGGGAACTCAGGAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: LQTQLVLAFRVFLYD*GGATQALQGTQELS
Trigger: TGAGAGCTCCTGAGTTCCCTGCAGGGCTTGGGTAGCTCCTCCCCAGTCATACAGGAACACCCTGAATGCCAGAACCAGTTGGGTTTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS-3UTR CAA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGCTCCCTGTAAACATTaGGACTTGGGCTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLAPCKH*DLGWGR
Trigger: CCTGCCCCAGCCCAAGTCCAAATGTTTACAGGGAGC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTGTCTGGAACAGCCCTaGGAACCCAATTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ATRMSRWTVVSRNGGVSRCLEQP*EPNSVE
Trigger: CTCCACAGAATTGGGTTCCAAGGGCTGTTCCAGACA...GCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000441156.5
CDS-3UTR CAA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCGGCGTCTCACGCTTCTaGTGCTTTTTCCTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GGLWFPGMVASHASCAFSGVSRF*CFFLWG
Trigger: GCCCCAAAGGAAAAAGCACAAGAAGCGTGAGACGCC...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTGGGGGCTCGGATGACTaGCTGAGTTTGATTTCAGAG +
Preference number: 5 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLGGSDD*LSLISE
Trigger: CTCTGAAATCAAACTCAGCAAGTCATCCGAGCCCCC...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS TCA 90 bp TCAGCTGAGGTCCAGAGTGGGCCAGGAGCCAGTCACAGTCATCAGTaGGGTACATCGTGGGCATCTCAGTTTCTTCATACTCAGGAATCC +
Preference number: 5 (lower is better)
Translates to: SAEVQSGPGASHSHQ*GTSWASQFLHTQES
Trigger: GGATTCCTGAGTATGAAGAAACTGAGATGCCCACGATGTACCTCACTGATGACTGTGACTGGCTCCTGGCCCACTCTGGACCTCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000480090.1
ENST00000491100.5
CDS GCA 90 bp TTCCCAGGAGCTACTGCTTTGTTCATGTTATTGCCTAGTCCTCCTTaGCATGCTTTCCAAAGGCTGGGGCTGGTAGCCTCTCCCGTGACT +
Preference number: 5 (lower is better)
Translates to: FPGATALFMLLPSPP*HAFQRLGLVASPVT
Trigger: AGTCACGGGAGAGGCTACCAGCCCCAGCCTTTGGAAAGCATGGCAAGGAGGACTAGGCAATAACATGAACAAAGCAGTAGCTCCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS-3UTR CAA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGGCCTCATCATATTTGTaGGCCCCTGTGTACTCAGGG +
Preference number: 5 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLASSYL*APVYSG
Trigger: CCCTGAGTACACAGGGGCCAACAAATATGATGAGGC...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTTGTGCTTTTTCCTTaGGGGCCTCCGAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRLVLFP*GPPSGW
Trigger: CCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAAG...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS GCA 90 bp TCCTTTTCTTTGTCCTTGAAGAGTTCATGGTACAACCTGCCACTGTaGCTGTTGCATAGGCAGTCTCCAAAGGCCACCTCCCCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SFSLSLKSSWYNLPL*LLHRQSPKATSPGK
Trigger: CTTCCCAGGGGAGGTGGCCTTTGGAGACTGCCTATGCAACAGGCACAGTGGCAGGTTGTACCATGAACTCTTCAAGGACAAAGAAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS GCA 90 bp AGGAAGGGGTCATCTGTTCAACCACTGTTCCCTGAACATATTGCCTaGCAATGTGCTGAGAACCCTATGGTAAAAGAGGCAGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RKGSSVQPLFPEHIA*QCAENPMVKEAAGP
Trigger: GGGCCCAGCTGCCTCTTTTACCATAGGGTTCTCAGCACATTGGCAGGCAATATGTTCAGGGAACAGTGGTTGAACAGATGACCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS-3UTR CAA 90 bp AGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGAAGTCGATCTGCAGGTaGCCCATGGCTTTGACAATG +
Preference number: 5 (lower is better)
Translates to: RMSRWTVVSRNGGVSRFLKSICR*PMALTM
Trigger: CATTGTCAAAGCCATGGGCAACCTGCAGATCGACTT...CAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTGAAGTGTAGGTCCTaGAAGGTGAAGTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLLKCRS*KVKCVS
Trigger: GGAGACACACTTCACCTTCAAGGACCTACACTTCAA...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGAAGTGTAGGTCCTaGAAGGTGAAGTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFLKCRS*KVKCVS
Trigger: GGAGACACACTTCACCTTCAAGGACCTACACTTCAA...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp AAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCGCCTCATCATATTTGTaGGCCCCTGTGTACTCAGGG +
Preference number: 5 (lower is better)
Translates to: KSYENEQVDCGFQEWWRLASSYL*APVYSG
Trigger: CCCTGAGTACACAGGGGCCAACAAATATGATGAGGC...GAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCTTGAAGTGTAGGTCCTaGAAGGTGAAGTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GGLWFPGMVASHASCAFSLKCRS*KVKCVS
Trigger: GGAGACACACTTCACCTTCAAGGACCTACACTTCAA...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCCCCACATCAAACATCTaGAAGTGTAGGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFPTSNI*KCRSLK
Trigger: CTTCAAGGACCTACACTTCAAGATGTTTGATGTGGG...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTCCCACATCAAACATCTaGAAGTGTAGGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: EQVDCGFQEWWRLTLLVLPTSNI*KCRSLK
Trigger: CTTCAAGGACCTACACTTCAAGATGTTTGATGTGGG...AAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp ACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCGATGACTTGCTGAGTTaGATTTCAGAGTCATCGGGA +
Preference number: 5 (lower is better)
Translates to: TRMSRWTVVSRNGGVSRFDDLLS*ISESSG
Trigger: TCCCGATGACTCTGAAATCAAACTCAGCAAGTCATC...GAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS TCA 90 bp TTGGGGCCAAGGCCTAAACTTAACCTCCCTCCTTTTCTTTGTCCTTaGAGAGTTCATGGTACAACCTGCCACTGTGCCTGTTGCATAGGC +
Preference number: 5 (lower is better)
Translates to: LGPRPKLNLPPFLCP*RVHGTTCHCACCIG
Trigger: GCCTATGCAACAGGCACAGTGGCAGGTTGTACCATGAACTCTTCAAGGACAAAGAAAAGGAGGGAGGTTAAGTTTAGGCCTTGGCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS-3UTR CAA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTGCCTCATCATATTTGTaGGCCCCTGTGTACTCAGGG +
Preference number: 5 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRASSYL*APVYSG
Trigger: CCCTGAGTACACAGGGGCCAACAAATATGATGAGGC...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS-3UTR CAA 90 bp GGTGGACTGTGGTTTCCAGGAATGGTGGCGTCTCACGCTTCTTGTGCTTTTTCCGATGACTTGCTGAGTTaGATTTCAGAGTCATCGGGA +
Preference number: 5 (lower is better)
Translates to: GGLWFPGMVASHASCAFSDDLLS*ISESSG
Trigger: TCCCGATGACTCTGAAATCAAACTCAGCAAGTCATC...GGAAAAAGCACAAGAAGCGTGAGACGCCACCATTCCTGGAAACCACAGTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS-3UTR CAA 90 bp TTAAAAAGCTACGAGAATGAGCAGGTGGACTGTGGTTTCCAGGAATGGTGGCGTCCCACATCAAACATCTaGAAGTGTAGGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: LKSYENEQVDCGFQEWWRPTSNI*KCRSLK
Trigger: CTTCAAGGACCTACACTTCAAGATGTTTGATGTGGG...ACGCCACCATTCCTGGAAACCACAGTCCACCTGCTCATTCTCGTAGCTTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000441156.5
ENST00000446079.5
CDS GCA 72 bp CTGCTTCCTGAGGGCGGAGTAGCTCCGCATCGCCCATaGCAGCCTAGGGCCGCTGCGCCGTGGGGGCTCGGA +
Preference number: 6 (lower is better)
Translates to: LLPEGGVAPHRP*QPRAAAPWGLG
Trigger: TCCGAGCCCCCACGGCGCAGCGGCCCTAGGCTGGCATGGGCGATGCGGAGCTACTCCGCCCTCAGGAAGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS CAA 90 bp GTCTGGCTGGCTCCCTGCAGTACACACCTGCGCCGATGCCCAGCGTaGAGGCCCTACCCATCCCGGGGGACCTTTCCCCTCCCGCCTCCC +
Preference number: 6 (lower is better)
Translates to: VWLAPCSTHLRRCPA*RPYPSRGTFPLPPP
Trigger: GGGAGGCGGGAGGGGAAAGGTCCCCCGGGATGGGTAGGGCCTCAACGCTGGGCATCGGCGCAGGTGTGTACTGCAGGGAGCCAGCCAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS GCA 72 bp GTCTGGCTGGCTCCCTGCAGTACACACCTGCGCCGATaGCCAGCGTTGAGGCCCTACCCATCCCGGGGGACC +
Preference number: 6 (lower is better)
Translates to: VWLAPCSTHLRR*PALRPYPSRGT
Trigger: GGTCCCCCGGGATGGGTAGGGCCTCAACGCTGGGCATCGGCGCAGGTGTGTACTGCAGGGAGCCAGCCAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS CCA 72 bp GAGCTGGTGGTAGTGGGCAGCAGGGCTGGGCTCCGCTaGCATGCAGCTTCCGGCAGGCTGGGCCAATGGCCT +
Preference number: 6 (lower is better)
Translates to: ELVVVGSRAGLR*HAASGRLGQWP
Trigger: AGGCCATTGGCCCAGCCTGCCGGAAGCTGCATGCCAGCGGAGCCCAGCCCTGCTGCCCACTACCACCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492383.1
CDS TCA 72 bp CTCCCTGCAGTACACACCTGCGCCGATGCCCAGCGTTaGGGCCCTACCCATCCCGGGGGACCTTTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: LPAVHTCADAQR*GPTHPGGPFPS
Trigger: GGAGGGGAAAGGTCCCCCGGGATGGGTAGGGCCTCAACGCTGGGCATCGGCGCAGGTGTGTACTGCAGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS TCA 72 bp TGGGTGATTCTCCCGCTGGGCACCTCGCCTGCTTCCTaGGGGCGGAGTAGCTCCGCATCGCCCATGCCAGCC +
Preference number: 6 (lower is better)
Translates to: WVILPLGTSPAS*GRSSSASPMPA
Trigger: GGCTGGCATGGGCGATGCGGAGCTACTCCGCCCTCAGGAAGCAGGCGAGGTGCCCAGCGGGAGAATCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS CAA 72 bp GCTCCCTGCAGTACACACCTGCGCCGATGCCCAGCGTaGAGGCCCTACCCATCCCGGGGGACCTTTCCCCTC +
Preference number: 6 (lower is better)
Translates to: APCSTHLRRCPA*RPYPSRGTFPL
Trigger: GAGGGGAAAGGTCCCCCGGGATGGGTAGGGCCTCAACGCTGGGCATCGGCGCAGGTGTGTACTGCAGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS CCA 72 bp CTCTACTCCGGGCTTCCCCCAAGGTCAGGCAGTCCGTaGGGGGTCTGGCTGGCTCCCTGCAGTACACACCTG +
Preference number: 6 (lower is better)
Translates to: LYSGLPPRSGSP*GVWLAPCSTHL
Trigger: CAGGTGTGTACTGCAGGGAGCCAGCCAGACCCCCCACGGACTGCCTGACCTTGGGGGAAGCCCGGAGTAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS CCA 72 bp GGGCTGGGCTCCGCTGGCATGCAGCTTCCGGCAGGCTaGGCCAATGGCCTGGTGGGTGAGGAGGTGAGATTT +
Preference number: 6 (lower is better)
Translates to: GLGSAGMQLPAG*ANGLVGEEVRF
Trigger: AAATCTCACCTCCTCACCCACCAGGCCATTGGCCCAGCCTGCCGGAAGCTGCATGCCAGCGGAGCCCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492383.1
CDS GCA 72 bp CCTTGCTCCTCGGCGGTGCAGGACAGTGCAAATAGCTaGCTGGCGTCGTCCGCTCTGGAGGGGTCGGCAAAG +
Preference number: 6 (lower is better)
Translates to: PCSSAVQDSANS*LASSALEGSAK
Trigger: CTTTGCCGACCCCTCCAGAGCGGACGACGCCAGGCAGCTATTTGCACTGTCCTGCACCGCCGAGGAGCAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000440628.5
ENST00000441156.5
ENST00000446079.5
ENST00000451956.1
ENST00000490122.5
ENST00000491100.5
CDS GCA 72 bp CGGATGACGCCGGACAGGTCATCAGGGAGCACGCCTTaGTCCTCGGCGGTGCAGGACAGTGCAAATAGCTGC +
Preference number: 6 (lower is better)
Translates to: RMTPDRSSGSTP*SSAVQDSANSC
Trigger: GCAGCTATTTGCACTGTCCTGCACCGCCGAGGAGCAAGGCGTGCTCCCTGATGACCTGTCCGGCGTCATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000266027.9
ENST00000313601.11
ENST00000422163.5
ENST00000440628.5
ENST00000441156.5
ENST00000446079.5
ENST00000451956.1
ENST00000490122.5
ENST00000491100.5
CDS TCA 72 bp TGCCAGCCTAGGGCCGCTGCGCCGTGGGGGCTCGGATaGCTTGCTGAGTTTGATTTCAGAGTCATCGGGAGG +
Preference number: 6 (lower is better)
Translates to: CQPRAAAPWGLG*LAEFDFRVIGR
Trigger: CCTCCCGATGACTCTGAAATCAAACTCAGCAAGTCATCCGAGCCCCCACGGCGCAGCGGCCCTAGGCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS TCA 72 bp TTCCCTGACTCCCCAGCACCCTCAGAACGTCCCCAGTaGCACCCGCCTTTCTGCTTCGTCCAGCCTAGCGTC +
Preference number: 6 (lower is better)
Translates to: FPDSPAPSERPQ*HPPFCFVQPSV
Trigger: GACGCTAGGCTGGACGAAGCAGAAAGGCGGGTGTCACTGGGGACGTTCTGAGGGTGCTGGGGAGTCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS TCA 72 bp AGCCTTAGCAACCAGGGGCCCTCAGAACGTCCCCAGTaGCACCCGCCTTTCTGCTTCGTCCAGCCTAGCGTC +
Preference number: 6 (lower is better)
Translates to: SLSNQGPSERPQ*HPPFCFVQPSV
Trigger: GACGCTAGGCTGGACGAAGCAGAAAGGCGGGTGTCACTGGGGACGTTCTGAGGGCCCCTGGTTGCTAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446079.5
CDS TCA 72 bp CAGGATCCTGACCACCCTACCTCCACGGCTCCCAGATaGCAGGGAGTCCCTGGCCAAGGACCTGTGACCAAC +
Preference number: 6 (lower is better)
Translates to: QDPDHPTSTAPR*QGVPGQGPVTN
Trigger: GTTGGTCACAGGTCCTTGGCCAGGGACTCCCTGTCATCTGGGAGCCGTGGAGGTAGGGTGGTCAGGATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS GCA 72 bp ACAGCGTCACACTTCAGCTTTCTGGACATGGCCCAATaGCCCGCCCTCTGCTCACTGCGCTCAGGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: TASHFSFLDMAQ*PALCSLRSGLP
Trigger: GGGCAGACCTGAGCGCAGTGAGCAGAGGGCGGGGCATTGGGCCATGTCCAGAAAGCTGAAGTGTGACGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS CCA 72 bp TCCAAGGAGCAGGCCTGGTGGGATGGGGGACCCTTCTaGTGTCGGGACACAAAACTAGCCAGAAGCCCTGCG +
Preference number: 6 (lower is better)
Translates to: SKEQAWWDGGPF*CRDTKLARSPA
Trigger: CGCAGGGCTTCTGGCTAGTTTTGTGTCCCGACACCAGAAGGGTCCCCCATCCCACCAGGCCTGCTCCTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440628.5
CDS CCA 72 bp AGTGTCCCCTGGGCACTGGGAGTTCCCACGGCTGCCTaGGGCTACTGGGACCTGCTTCAGAGAAGGGAAAAC +
Preference number: 6 (lower is better)
Translates to: SVPWALGVPTAA*GYWDLLQRREN
Trigger: GTTTTCCCTTCTCTGAAGCAGGTCCCAGTAGCCCCAGGCAGCCGTGGGAACTCCCAGTGCCCAGGGGACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS TCA 72 bp CTCCTCCATGCCCTGCACCTCACTCACTTGACCTCCTaGTTCACACCCTGGGCCTTCTCCTCCCTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: LLHALHLTHLTS*FTPWAFSSLVP
Trigger: GGGGACAAGGGAGGAGAAGGCCCAGGGTGTGAATCAGGAGGTCAAGTGAGTGAGGTGCAGGGCATGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492383.1
CDS GCA 72 bp TGTTCCTGTATGACTGGGGAGGAGCTACCCAAGCCCTaGAGGGAACTCAGGAGCTCTCAGGGCTTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: CSCMTGEELPKP*RELRSSQGFGA
Trigger: GGCCCCAAAGCCCTGAGAGCTCCTGAGTTCCCTGCAGGGCTTGGGTAGCTCCTCCCCAGTCATACAGGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS GCA 72 bp CAGGGCCACAGTGGTCAAGGTAACCTAGAGCACCTGTaGCCCATGGCAGACTCTCTGCAGGCCTTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: QGHSGQGNLEHL*PMADSLQAFAS
Trigger: GGAGGCAAAGGCCTGCAGAGAGTCTGCCATGGGGCACAGGTGCTCTAGGTTACCTTGACCACTGTGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS CCA 72 bp CACATAGTCAATGGCGGACATAGTCAATGGCGGGTCTaGGGGTCCGGCCTCTTCCTCTACTCCGGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: HIVNGGHSQWRV*GSGLFLYSGLP
Trigger: GGGAAGCCCGGAGTAGAGGAAGAGGCCGGACCCCCAGACCCGCCATTGACTATGTCCGCCATTGACTATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422163.5
CDS CCA 72 bp CCAAAAGGTGAGCTGGGCTCCAAGGAGCAGGCCTGGTaGGATGGGGGACCCTTCTGGTGTCGGGACACAAAA +
Preference number: 6 (lower is better)
Translates to: PKGELGSKEQAW*DGGPFWCRDTK
Trigger: TTTTGTGTCCCGACACCAGAAGGGTCCCCCATCCCACCAGGCCTGCTCCTTGGAGCCCAGCTCACCTTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440628.5
CDS CCA 72 bp GAGCCTGGGGGAGGCTTTCTACCCCATTTCTCAGGTTaGCTGACTGAGGACAGAGGCCTGCCCAGAGTAGGG +
Preference number: 6 (lower is better)
Translates to: EPGGGFLPHFSG*LTEDRGLPRVG
Trigger: CCCTACTCTGGGCAGGCCTCTGTCCTCAGTCAGCCAACCTGAGAAATGGGGTAGAAAGCCTCCCCCAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS CAA 72 bp TCGGCAGGCAGCCATCCTGGACTCCAATCCCTTGCTTaGCAGCTGAGTCAGCTGAGGTCCAGAGTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SAGSHPGLQSLA*QLSQLRSRVGQ
Trigger: CTGGCCCACTCTGGACCTCAGCTGACTCAGCTGCAAAGCAAGGGATTGGAGTCCAGGATGGCTGCCTGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480090.1
CDS CAA 90 bp AGGCCTGCCCAGAGTAGGGCAGCTACCTTCTGGAATCATCCACACTaGCCCACTTCACCCCTGGTTCTGGGCCAGGAGCTTGGACAGCAG +
Preference number: 6 (lower is better)
Translates to: RPAQSRAATFWNHPH*PTSPLVLGQELGQQ
Trigger: CTGCTGTCCAAGCTCCTGGCCCAGAACCAGGGGTGAAGTGGGCAAGTGTGGATGATTCCAGAAGGTAGCTGCCCTACTCTGGGCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS CAA 90 bp AGGCATTCTTCGGCAGGCAGCCATCCTGGACTCCAATCCCTTGCTTaGCAGCTGAGTCAGCTGAGGTCCAGAGTGGGCCAGGAGCCAGTC +
Preference number: 6 (lower is better)
Translates to: RHSSAGSHPGLQSLA*QLSQLRSRVGQEPV
Trigger: GACTGGCTCCTGGCCCACTCTGGACCTCAGCTGACTCAGCTGCAAAGCAAGGGATTGGAGTCCAGGATGGCTGCCTGCCGAAGAATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480090.1
CDS CAA 90 bp TGGAGAAGTGGCAGCTGCTGGTTCACCCCTACTGCCAGAATAGTCTaGGGGCTCACCACAGGCAGCACAGCAGGTCCAGCTTGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: WRSGSCWFTPTARIV*GLTTGSTAGPAWPE
Trigger: CTCAGGCCAAGCTGGACCTGCTGTGCTGCCTGTGGTGAGCCCCAAGACTATTCTGGCAGTAGGGGTGAACCAGCAGCTGCCACTTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS TCA 72 bp GCTTCGTCCAGCCTAGCGTCTTCACACCCTCCGTCATaGGACGCTCCCTCCTTCTCGCGCTTCCACTTCACA +
Preference number: 6 (lower is better)
Translates to: ASSSLASSHPPS*DAPSFSRFHFT
Trigger: TGTGAAGTGGAAGCGCGAGAAGGAGGGAGCGTCTCATGACGGAGGGTGTGAAGACGCTAGGCTGGACGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422163.5
ENST00000446079.5
CDS TCA 72 bp GGGAGGCTTTCTACCCCATTTCTCAGGTTGGCTGACTaGGGACAGAGGCCTGCCCAGAGTAGGGCAGCTACC +
Preference number: 6 (lower is better)
Translates to: GRLSTPFLRLAD*GQRPAQSRAAT
Trigger: GGTAGCTGCCCTACTCTGGGCAGGCCTCTGTCCTCAGTCAGCCAACCTGAGAAATGGGGTAGAAAGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS GCA 72 bp AAGCCAGAAGAGAGTGACGACAGAGGCAGCAGCAAGTaGAAGGGCCCTGGGTTGGGAAGGAGCTGGATGCTC +
Preference number: 6 (lower is better)
Translates to: KPEESDDRGSSK*KGPGLGRSWML
Trigger: GAGCATCCAGCTCCTTCCCAACCCAGGGCCCTTGCACTTGCTGCTGCCTCTGTCGTCACTCTCTTCTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS GCA 72 bp AGGGTGGCCCCTCAGCTGGAATGGAGAAGTGGCAGCTaGTGGTTCACCCCTACTGCCAGAATAGTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: RVAPQLEWRSGS*WFTPTARIVLG
Trigger: CCCCAAGACTATTCTGGCAGTAGGGGTGAACCAGCAGCTGCCACTTCTCCATTCCAGCTGAGGGGCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CCA 72 bp CCTTCTGGAATCATCCACACTTGCCCACTTCACCCCTaGTTCTGGGCCAGGAGCTTGGACAGCAGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: PSGIIHTCPLHP*FWARSLDSRQA
Trigger: AGCCTGCCTGCTGTCCAAGCTCCTGGCCCAGAACCAGGGGTGAAGTGGGCAAGTGTGGATGATTCCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS CCA 72 bp CCCTACCTCCACGGCTCCCAGATGACAGGGAGTCCCTaGCCAAGGACCTGTGACCAACTCAATCACAGCCTT +
Preference number: 6 (lower is better)
Translates to: PYLHGSQMTGSP*PRTCDQLNHSL
Trigger: AAGGCTGTGATTGAGTTGGTCACAGGTCCTTGGCCAGGGACTCCCTGTCATCTGGGAGCCGTGGAGGTAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CAA 90 bp CAGGGAGTCCCTGGCCAAGGACCTGTGACCAACTCAATCACAGCCTaGCAGCTACTGCTTGTAGACCTCGTGGCTACAGCTTGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: QGVPGQGPVTNSITA*QLLLVDLVATACSR
Trigger: GCGGGAGCAAGCTGTAGCCACGAGGTCTACAAGCAGTAGCTGCAAGGCTGTGATTGAGTTGGTCACAGGTCCTTGGCCAGGGACTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CAA 90 bp CCCCTCCCACCTGTCCACATGCTCGCTCACTTGAAGTGTAGGTCCTaGAAGGTGAAGTGTGTCTCCACGATCCCCGTGGTCTTTACGCGG +
Preference number: 6 (lower is better)
Translates to: PLPPVHMLAHLKCRS*KVKCVSTIPVVFTR
Trigger: CCGCGTAAAGACCACGGGGATCGTGGAGACACACTTCACCTTCAAGGACCTACACTTCAAGTGAGCGAGCATGTGGACAGGTGGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS TCA 72 bp TGTATGACCTCCTCCATGCCCTGCACCTCACTCACTTaGCCTCCTGATTCACACCCTGGGCCTTCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: CMTSSMPCTSLT*PPDSHPGPSPP
Trigger: GGGAGGAGAAGGCCCAGGGTGTGAATCAGGAGGTCAAGTGAGTGAGGTGCAGGGCATGGAGGAGGTCATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492383.1
CDS GCA 72 bp TTCTTCGGCAGGCAGCCATCCTGGACTCCAATCCCTTaGTTTGCAGCTGAGTCAGCTGAGGTCCAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: FFGRQPSWTPIP*FAAESAEVQSG
Trigger: CCCACTCTGGACCTCAGCTGACTCAGCTGCAAAGCAAGGGATTGGAGTCCAGGATGGCTGCCTGCCGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480090.1
CDS GCA 72 bp TGTAGACCTCGTGGCTACAGCTTGCTCCCGCCTTACTaGCCTGGGGCAGGTTCTACTTCCTGGTTCAACTCC +
Preference number: 6 (lower is better)
Translates to: CRPRGYSLLPPY*PGAGSTSWFNS
Trigger: GGAGTTGAACCAGGAAGTAGAACCTGCCCCAGGGCAGTAAGGCGGGAGCAAGCTGTAGCCACGAGGTCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS GCA 72 bp ACATACATAGGCTCGCCAACCTGTGCAGCTGGTGCATaGCAATATGGTGCCCTGGGCAGAGCTGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: TYIGSPTCAAGA*QYGALGRAGRK
Trigger: CTTCCTGCCAGCTCTGCCCAGGGCACCATATTGGCATGCACCAGCTGCACAGGTTGGCGAGCCTATGTATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS GCA 72 bp CCACCCTGTTCTCACATACATAGGCTCGCCAACCTGTaGAGCTGGTGCATGCCAATATGGTGCCCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: PPCSHIHRLANL*SWCMPIWCPGQ
Trigger: CTGCCCAGGGCACCATATTGGCATGCACCAGCTGCACAGGTTGGCGAGCCTATGTATGTGAGAACAGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS CCA 72 bp GGACAGAGGCCTGCCCAGAGTAGGGCAGCTACCTTCTaGAATCATCCACACTTGCCCACTTCACCCCTGGTT +
Preference number: 6 (lower is better)
Translates to: GQRPAQSRAATF*NHPHLPTSPLV
Trigger: AACCAGGGGTGAAGTGGGCAAGTGTGGATGATTCCAGAAGGTAGCTGCCCTACTCTGGGCAGGCCTCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS CCA 72 bp CTCCCGCCTTACTGCCCTGGGGCAGGTTCTACTTCCTaGTTCAACTCCTGCGCTTTCCCCTTCCTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: LPPYCPGAGSTS*FNSCAFPFLLL
Trigger: AAGAAGCAGGAAGGGGAAAGCGCAGGAGTTGAACCAGGAAGTAGAACCTGCCCCAGGGCAGTAAGGCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CAA 72 bp CTTGCAGCTACTGCTTGTAGACCTCGTGGCTACAGCTaGCTCCCGCCTTACTGCCCTGGGGCAGGTTCTACT +
Preference number: 6 (lower is better)
Translates to: LAATACRPRGYS*LPPYCPGAGST
Trigger: AGTAGAACCTGCCCCAGGGCAGTAAGGCGGGAGCAAGCTGTAGCCACGAGGTCTACAAGCAGTAGCTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CAA 90 bp AAACTAGCCAGAAGCCCTGCGTTCCCCCAGCTCTATGGTCCAGTCTaGCATTTCCTCGGCCACCACAGTAACTGCAATCGCCTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: KLARSPAFPQLYGPV*HFLGHHSNCNRLGR
Trigger: TCTCCCCAGGCGATTGCAGTTACTGTGGTGGCCGAGGAAATGCAAGACTGGACCATAGAGCTGGGGGAACGCAGGGCTTCTGGCTAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440628.5
CDS CAA 90 bp AATCACAGCCTTGCAGCTACTGCTTGTAGACCTCGTGGCTACAGCTaGCTCCCGCCTTACTGCCCTGGGGCAGGTTCTACTTCCTGGTTC +
Preference number: 6 (lower is better)
Translates to: NHSLAATACRPRGYS*LPPYCPGAGSTSWF
Trigger: GAACCAGGAAGTAGAACCTGCCCCAGGGCAGTAAGGCGGGAGCAAGCTGTAGCCACGAGGTCTACAAGCAGTAGCTGCAAGGCTGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS TCA 72 bp AACCCAACTGGTTCTGGCATTCAGGGTGTTCCTGTATaGCTGGGGAGGAGCTACCCAAGCCCTGCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: NPTGSGIQGVPV*LGRSYPSPAGN
Trigger: GTTCCCTGCAGGGCTTGGGTAGCTCCTCCCCAGTCATACAGGAACACCCTGAATGCCAGAACCAGTTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS TCA 72 bp AGCAGGTTGAGGAATGAAGACCCTCTCAGTGGGCTGTaGCATGCTTGCCTGCAGGCTCTAGGAAGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: SRLRNEDPLSGL*HACLQALGRGS
Trigger: GCTTCCCCTTCCTAGAGCCTGCAGGCAAGCATGTCACAGCCCACTGAGAGGGTCTTCATTCCTCAACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS GCA 72 bp GGTCCAGTCTTGCATTTCCTCGGCCACCACAGTAACTaGAATCGCCTGGGGAGAGGCTGTCTAGAGACTCCT +
Preference number: 6 (lower is better)
Translates to: GPVLHFLGHHSN*NRLGRGCLETP
Trigger: AGGAGTCTCTAGACAGCCTCTCCCCAGGCGATTGCAGTTACTGTGGTGGCCGAGGAAATGCAAGACTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440628.5
CDS CCA 72 bp ATCTACCGGGAGGCATTCTTCGGCAGGCAGCCATCCTaGACTCCAATCCCTTGCTTTGCAGCTGAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: IYREAFFGRQPS*TPIPCFAAESA
Trigger: AGCTGACTCAGCTGCAAAGCAAGGGATTGGAGTCCAGGATGGCTGCCTGCCGAAGAATGCCTCCCGGTAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480090.1
CDS CCA 72 bp CAAGCCCTGCAGGGAACTCAGGAGCTCTCAGGGCTTTaGGGCCAAGGCCTAAACTTAACCTCCCTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: QALQGTQELSGL*GQGLNLTSLLF
Trigger: GAAAAGGAGGGAGGTTAAGTTTAGGCCTTGGCCCCAAAGCCCTGAGAGCTCCTGAGTTCCCTGCAGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CCA 72 bp CAACTGGTTCTGGCATTCAGGGTGTTCCTGTATGACTaGGGAGGAGCTACCCAAGCCCTGCAGGGAACTCAG +
Preference number: 6 (lower is better)
Translates to: QLVLAFRVFLYD*GGATQALQGTQ
Trigger: CTGAGTTCCCTGCAGGGCTTGGGTAGCTCCTCCCCAGTCATACAGGAACACCCTGAATGCCAGAACCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CCA 72 bp TGTTCTCACATACATAGGCTCGCCAACCTGTGCAGCTaGTGCATGCCAATATGGTGCCCTGGGCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: CSHIHRLANLCS*CMPIWCPGQSW
Trigger: CCAGCTCTGCCCAGGGCACCATATTGGCATGCACCAGCTGCACAGGTTGGCGAGCCTATGTATGTGAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS CAA 72 bp AGAAGCCCTGCGTTCCCCCAGCTCTATGGTCCAGTCTaGCATTTCCTCGGCCACCACAGTAACTGCAATCGC +
Preference number: 6 (lower is better)
Translates to: RSPAFPQLYGPV*HFLGHHSNCNR
Trigger: GCGATTGCAGTTACTGTGGTGGCCGAGGAAATGCAAGACTGGACCATAGAGCTGGGGGAACGCAGGGCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440628.5
CDS CAA 72 bp CAGAGTAGGGCAGCTACCTTCTGGAATCATCCACACTaGCCCACTTCACCCCTGGTTCTGGGCCAGGAGCTT +
Preference number: 6 (lower is better)
Translates to: QSRAATFWNHPH*PTSPLVLGQEL
Trigger: AAGCTCCTGGCCCAGAACCAGGGGTGAAGTGGGCAAGTGTGGATGATTCCAGAAGGTAGCTGCCCTACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS CAA 72 bp CCAAGCCCTGCAGGGAACTCAGGAGCTCTCAGGGCTTaGGGGCCAAGGCCTAAACTTAACCTCCCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: PSPAGNSGALRA*GPRPKLNLPPF
Trigger: AAAAGGAGGGAGGTTAAGTTTAGGCCTTGGCCCCAAAGCCCTGAGAGCTCCTGAGTTCCCTGCAGGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CAA 90 bp TCTTTGTCCTTGAAGAGTTCATGGTACAACCTGCCACTGTGCCTGTaGCATAGGCAGTCTCCAAAGGCCACCTCCCCTGGGAAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SLSLKSSWYNLPLCL*HRQSPKATSPGKPR
Trigger: CCTGGGCTTCCCAGGGGAGGTGGCCTTTGGAGACTGCCTATGCAACAGGCACAGTGGCAGGTTGTACCATGAACTCTTCAAGGACAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CAA 90 bp AGGAGCTACCCAAGCCCTGCAGGGAACTCAGGAGCTCTCAGGGCTTaGGGGCCAAGGCCTAAACTTAACCTCCCTCCTTTTCTTTGTCCT +
Preference number: 6 (lower is better)
Translates to: RSYPSPAGNSGALRA*GPRPKLNLPPFLCP
Trigger: AGGACAAAGAAAAGGAGGGAGGTTAAGTTTAGGCCTTGGCCCCAAAGCCCTGAGAGCTCCTGAGTTCCCTGCAGGGCTTGGGTAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS TCA 72 bp GAGCAGATGAAGAGCAATGGACAGCGGCTAACAGGCTaGTTCAGAGCTGTGGTGGTTCCCTGCTGGGACTCA +
Preference number: 6 (lower is better)
Translates to: EQMKSNGQRLTG*FRAVVVPCWDS
Trigger: TGAGTCCCAGCAGGGAACCACCACAGCTCTGAATCAGCCTGTTAGCCGCTGTCCATTGCTCTTCATCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451956.1
CDS TCA 72 bp GGTGGCGTGGATCCTGACTGCTGGTTCACTAGGTGGTaGGGATGTGCTTGCCCAGAACACATGAGCCTTGTA +
Preference number: 6 (lower is better)
Translates to: GGVDPDCWFTRW*GCACPEHMSLV
Trigger: TACAAGGCTCATGTGTTCTGGGCAAGCACATCCTCACCACCTAGTGAACCAGCAGTCAGGATCCACGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS TCA 72 bp AGAGCAAGAGAAGACTGGTGTGAGAGGGGACTGCCATaGGGCATCATGGAGGAACAAGCCACACAGGGGGTT +
Preference number: 6 (lower is better)
Translates to: RAREDWCERGLP*GIMEEQATQGV
Trigger: AACCCCCTGTGTGGCTTGTTCCTCCATGATGCCTCATGGCAGTCCCCTCTCACACCAGTCTTCTCTTGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CCA 72 bp GGCCCAGCACCGCTTGGACTAGACCATAAAGGACAATaGAATGACATCAGCAGAGTTGAGGGTGGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: GPAPLGLDHKGQ*NDISRVEGGPS
Trigger: TGAGGGGCCACCCTCAACTCTGCTGATGTCATTCCATTGTCCTTTATGGTCTAGTCCAAGCGGTGCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS CAA 72 bp CCTGTCCACATGCTCGCTCACTTGAAGTGTAGGTCCTaGAAGGTGAAGTGTGTCTCCACGATCCCCGTGGTC +
Preference number: 6 (lower is better)
Translates to: PVHMLAHLKCRS*KVKCVSTIPVV
Trigger: GACCACGGGGATCGTGGAGACACACTTCACCTTCAAGGACCTACACTTCAAGTGAGCGAGCATGTGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468422.1
CDS CAA 72 bp TTGAAGAGTTCATGGTACAACCTGCCACTGTGCCTGTaGCATAGGCAGTCTCCAAAGGCCACCTCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: LKSSWYNLPLCL*HRQSPKATSPG
Trigger: CCCAGGGGAGGTGGCCTTTGGAGACTGCCTATGCAACAGGCACAGTGGCAGGTTGTACCATGAACTCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS TCA 72 bp GATGCTGAGGTAGGGGCACCAACATCTCCAAGCCAGTaGTCCACACCTAGCCCTACAAACCCAACTGGTTCT +
Preference number: 6 (lower is better)
Translates to: DAEVGAPTSPSQ*STPSPTNPTGS
Trigger: AGAACCAGTTGGGTTTGTAGGGCTAGGTGTGGATCACTGGCTTGGAGATGTTGGTGCCCCTACCTCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS TCA 72 bp TTCCTATCGAGCAGTAGCCCTGAGCAGGTTGAGGAATaGAGACCCTCTCAGTGGGCTGTGACATGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: FLSSSSPEQVEE*RPSQWAVTCLP
Trigger: AGGCAAGCATGTCACAGCCCACTGAGAGGGTCTTCATTCCTCAACCTGCTCAGGGCTACTGCTCGATAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS TCA 72 bp GAGACCTACAGTGTAACACACACGCGTACTGACTCATaGATCTGGGAGACCTGCGGCGTATCTCACACACCC +
Preference number: 6 (lower is better)
Translates to: ETYSVTHTRTDS*IWETCGVSHTP
Trigger: GGGTGTGTGAGATACGCCGCAGGTCTCCCAGATTCATGAGTCAGTACGCGTGTGTGTTACACTGTAGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS TCA 72 bp GTCCAGAGTGGGCCAGGAGCCAGTCACAGTCATCAGTaGGGTACATCGTGGGCATCTCAGTTTCTTCATACT +
Preference number: 6 (lower is better)
Translates to: VQSGPGASHSHQ*GTSWASQFLHT
Trigger: AGTATGAAGAAACTGAGATGCCCACGATGTACCTCACTGATGACTGTGACTGGCTCCTGGCCCACTCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266027.9
ENST00000480090.1
ENST00000491100.5
CDS GCA 72 bp TTGTCCTTGAAGAGTTCATGGTACAACCTGCCACTGTaGCTGTTGCATAGGCAGTCTCCAAAGGCCACCTCC +
Preference number: 6 (lower is better)
Translates to: LSLKSSWYNLPL*LLHRQSPKATS
Trigger: GGAGGTGGCCTTTGGAGACTGCCTATGCAACAGGCACAGTGGCAGGTTGTACCATGAACTCTTCAAGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS GCA 72 bp GCTACTGCTTTGTTCATGTTATTGCCTAGTCCTCCTTaGCATGCTTTCCAAAGGCTGGGGCTGGTAGCCTCT +
Preference number: 6 (lower is better)
Translates to: ATALFMLLPSPP*HAFQRLGLVAS
Trigger: AGAGGCTACCAGCCCCAGCCTTTGGAAAGCATGGCAAGGAGGACTAGGCAATAACATGAACAAAGCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5
CDS TCA 72 bp AATCTAGGAGACCTACAGTGTAACACACACGCGTACTaGCTCATGAATCTGGGAGACCTGCGGCGTATCTCA +
Preference number: 6 (lower is better)
Translates to: NLGDLQCNTHAY*LMNLGDLRRIS
Trigger: TGAGATACGCCGCAGGTCTCCCAGATTCATGAGTCAGTACGCGTGTGTGTTACACTGTAGGTCTCCTAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490122.5
CDS GCA 72 bp TCATCTGTTCAACCACTGTTCCCTGAACATATTGCCTaGCAATGTGCTGAGAACCCTATGGTAAAAGAGGCA +
Preference number: 6 (lower is better)
Translates to: SSVQPLFPEHIA*QCAENPMVKEA
Trigger: TGCCTCTTTTACCATAGGGTTCTCAGCACATTGGCAGGCAATATGTTCAGGGAACAGTGGTTGAACAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491100.5