RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GNA12 (Homo sapiens)

Ensembl gene IDs: ENSG00000146535

Ensembl transcript IDs: ENST00000275364.8, ENST00000407653.1, ENST00000407904.7, ENST00000447791.1, ENST00000471281.5, ENST00000485329.1, ENST00000491117.5, ENST00000496740.6

Found 654 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGCTCACCACGCTCCGGACCGGGCTGCGCGTCACTGTTGCAGACTaGAAATGGGACCTGAGACCACCCCGAGGGCCCCACCAGGAGCTC +
Preference number: 1 (lower is better)
Translates to: KLTTLRTGLRVTVAD*KWDLRPPRGPHQEL
Trigger: GAGCTCCTGGTGGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 90 bp GGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGTaGCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGGTCAAGAGC +
Preference number: 1 (lower is better)
Translates to: GHEEEEEEVQLSKAK*LGQGGGVSAERVKS
Trigger: GCTCTTGACCCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 90 bp GGGTTGGGCAGTGGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTaGACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCC +
Preference number: 1 (lower is better)
Translates to: GLGSGWLRGEEHRCV*TDGAAVTVGILSHS
Trigger: GGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp ACCACGCTCCGGACCGGGCTGCGCGTCACTGTTGCAGACTGCAAATaGGACCTGAGACCACCCCGAGGGCCCCACCAGGAGCTCTCTTTC +
Preference number: 1 (lower is better)
Translates to: TTLRTGLRVTVADCK*DLRPPRGPHQELSF
Trigger: GAAAGAGAGCTCCTGGTGGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGCCCGGTCCGGAGCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 90 bp GCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCACTGTTaGAGACTGCAAATGGGACCTGAGACCACCCCGAGGGCCCCACCA +
Preference number: 1 (lower is better)
Translates to: ANKAHHAPDRAARHC*RLQMGPETTPRAPP
Trigger: TGGTGGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp AATCGGCACGGGAGTTTGAAAAGGCAACGTGCTCCCTTTGGGAGGTaGCCTTCAGACACTGCGGCTGGGGCTGCAGGGCCGGGCTCAGGC +
Preference number: 1 (lower is better)
Translates to: NRHGSLKRQRAPFGR*PSDTAAGAAGPGSG
Trigger: GCCTGAGCCCGGCCCTGCAGCCCCAGCCGCAGTGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp GAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTaGGCATCCTGTCTCACTCCGTGTTGTGCTGCTGGGCATGGGGCA +
Preference number: 1 (lower is better)
Translates to: EKSTAVCARTERQSP*ASCLTPCCAAGHGA
Trigger: TGCCCCATGCCCAGCAGCACAACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp ACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCTCCCCGTTaGCGGAGGACCCGCTTGCACTTCCTCTGGGCTCTGGATTCTAAC +
Preference number: 1 (lower is better)
Translates to: TALLSPTAPRRGSPR*RRTRLHFLWALDSN
Trigger: GTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 90 bp TCCGGACCGGGCTGCGCGTCACTGTTGCAGACTGCAAATGGGACCTaGGACCACCCCGAGGGCCCCACCAGGAGCTCTCTTTCTCCTTTA +
Preference number: 1 (lower is better)
Translates to: SGPGCASLLQTANGT*DHPEGPTRSSLSPL
Trigger: TAAAGGAGAAAGAGAGCTCCTGGTGGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGCCCGGTCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp CTTAGGAAATCGGCACGGGAGTTTGAAAAGGCAACGTGCTCCCTTTaGGAGGTGGCCTTCAGACACTGCGGCTGGGGCTGCAGGGCCGGG +
Preference number: 1 (lower is better)
Translates to: LRKSAREFEKATCSL*EVAFRHCGWGCRAG
Trigger: CCCGGCCCTGCAGCCCCAGCCGCAGTGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGATTTCCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp AGGGGACCTGGTTTCTGTGTCTTTGCCGTTGGGTTGGGCAGTGGGTaGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCG +
Preference number: 1 (lower is better)
Translates to: RGPGFCVFAVGLGSG*LRGEEHRCVCTDGA
Trigger: CGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCCAACGGCAAAGACACAGAAACCAGGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 90 bp CAACAGCGCCGCGAAGAGGCTCTCCCCGTTGGCGGAGGACCCGCTTaGACTTCCTCTGGGCTCTGGATTCTAACACACACAGGAGACACA +
Preference number: 1 (lower is better)
Translates to: QQRREEALPVGGGPA*TSSGLWILTHTGDT
Trigger: TGTGTCTCCTGTGTGTGTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCTTCGCGGCGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 90 bp AGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTaGTGTCGCCAACAGCGCCGCGAAGAGGCTCTCCCCGTTGGCGGA +
Preference number: 1 (lower is better)
Translates to: RKVFQTTPLLRESQR*CRQQRREEALPVGG
Trigger: TCCGCCAACGGGGAGAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp TGCAAGGGGACCTGGTTTCTGTGTCTTTGCCGTTGGGTTGGGCAGTaGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGG +
Preference number: 1 (lower is better)
Translates to: CKGTWFLCLCRWVGQ*VAKGRRAPLCVHGR
Trigger: CCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCCAACGGCAAAGACACAGAAACCAGGTCCCCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 90 bp AGAAACCCACTCAAGGACCACACAGACAACACACACCCAAGAGTCTaGCCGACAGCCGTGGGGGCTGCTCAACGACGACAAACCCCGGGG +
Preference number: 1 (lower is better)
Translates to: RNPLKDHTDNTHPRV*PTAVGAAQRRQTPG
Trigger: CCCCGGGGTTTGTCGTCGTTGAGCAGCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp GGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTaGAGAAACTCAAGATTCCTCCAGCGTCTGTGGGCTTCCCGAAAG +
Preference number: 1 (lower is better)
Translates to: GEQARLSKGTGGAAV*RNSRFLQRLWASRK
Trigger: CTTTCGGGAAGCCCACAGACGCTGGAGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp GCTCTCCCCGTTGGCGGAGGACCCGCTTGCACTTCCTCTGGGCTCTaGATTCTAACACACACAGGAGACACAGCGAAAGCTGACCCAGAA +
Preference number: 1 (lower is better)
Translates to: ALPVGGGPACTSSGL*ILTHTGDTAKADPE
Trigger: TTCTGGGTCAGCTTTCGCTGTGTCTCCTGTGTGTGTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCAACGGGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 90 bp TTGACAAGGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTaGTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAG +
Preference number: 1 (lower is better)
Translates to: LTRPDYSGRCFKQLP*YANHSAAVANSAAK
Trigger: CTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCCTTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 90 bp GTCTGTGGGCTTCCCGAAAGGTCAGCTGTTAGCTCGCCAAGCAGCTaGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCAGCTTTCTG +
Preference number: 1 (lower is better)
Translates to: VCGLPERSAVSSPSS*GINKSSASGLASFL
Trigger: CAGAAAGCTGGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAACAGCTGACCTTTCGGGAAGCCCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 90 bp TGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATaGGAATCAGACTTAGGGAGAGCGGCGAACAGGCACGGCTGTCCA +
Preference number: 1 (lower is better)
Translates to: CLLFCKHSHRSEGPR*ESDLGRAANRHGCP
Trigger: TGGACAGCCGTGCCTGTTCGCCGCTCTCCCTAAGTCTGATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 90 bp CTGAAAGAAGGAAACGCTATGTGCTGCCAACTGTGTGTGAGCAGATaGCTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTGGTT +
Preference number: 1 (lower is better)
Translates to: LKEGNAMCCQLCVSR*LAGRWESRLQGDLV
Trigger: AACCAGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACACAGTTGGCAGCACATAGCGTTTCCTTCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 90 bp AGCCAGACCCTCCCAATGTTAATACACTGTGCAAAGCTTACACCATaGACAACTGACCCGGACCACTACCATTCCAATGGGAGCCTCTGC +
Preference number: 1 (lower is better)
Translates to: SQTLPMLIHCAKLTP*TTDPDHYHSNGSLC
Trigger: GCAGAGGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTGCACAGTGTATTAACATTGGGAGGGTCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
3UTR-3UTR GCA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCACTGCGGCTGGGGCTaGAGGGCCGGGCTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: KSTAVCARTERQSPWASCHCGWG*RAGLRH
Trigger: GTGCCTGAGCCCGGCCCTGCAGCCCCAGCCGCAGTG...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTCACTGCGGCTGGGGCTaGAGGGCCGGGCTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: VCARTERQSPWASCLTPCHCGWG*RAGLRH
Trigger: GTGCCTGAGCCCGGCCCTGCAGCCCCAGCCGCAGTG...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGGGGTTGGGCAGTGGGTaGCTAAGGGGAGAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERGLGSG*LRGEEH
Trigger: GTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCC...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCACTGCAAATGGGACCTaGGACCACCCCGAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLTANGT*DHPEGP
Trigger: GGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGT...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGGCTGTCCAAAGGCACTaGTGGAGCGGCAGTTTGGAG +
Preference number: 2 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERAVQRH*WSGSLE
Trigger: CTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGC...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGATCGGCACGGGAGTTTaGAAAGGCAACGTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERIGTGV*KGNVLP
Trigger: AGGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGAT...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCACAGGGTGGGAAGGGCTaGGCCTGCTGTAGGGGCGTA +
Preference number: 2 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASQGGKG*ACCRGV
Trigger: TACGCCCCTACAGCAGGCTCAGCCCTTCCCACCCTG...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGCACAGCCTCGAGCACTaGGAGAGAGAGTTCCATGCT +
Preference number: 2 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERHSLEH*EREFHA
Trigger: AGCATGGAACTCTCTCTCGCAGTGCTCGAGGCTGTG...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGCGGGGGCCATCCCCCTaGGCTTTCTATCGAGTTAAA +
Preference number: 2 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERRGPSP*AFYRVK
Trigger: TTTAACTCGATAGAAAGCGCAGGGGGATGGCCCCCG...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGCCCGTCCTCAGAGCTaGGAAGGGATCCTAGGCACG +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLARPQS*EGILGT
Trigger: CGTGCCTAGGATCCCTTCCCAGCTCTGAGGACGGGC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGCTGTGCTAACAGGGTaGCCCAGAGGCAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLAVLTG*PRGRFP
Trigger: GGGAAACCTGCCTCTGGGTCACCCTGTTAGCACAGC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCTCTCACTCCGTGTTGTaGTGCTGGGCATGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLSHSVL*CWAWGR
Trigger: CCTGCCCCATGCCCAGCAGCACAACACGGAGTGAGA...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGCGAGAGAGAGTTCCATaGTGTCTCCCGATGAGAACG +
Preference number: 2 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERRERVP*CLPMRT
Trigger: CGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCG...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTGCCCGTCCTCAGAGCTaGGAAGGGATCCTAGGCACG +
Preference number: 2 (lower is better)
Translates to: VCARTERQSPWASCLTPCARPQS*EGILGT
Trigger: CGTGCCTAGGATCCCTTCCCAGCTCTGAGGACGGGC...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGGTCCAAAGGCACTGGTaGAGCGGCAGTTTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERVQRHW*SGSLEK
Trigger: TTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGAC...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAACACACCCAAGAGTCTaGCCGACAGCCGTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRTHPRV*PTAVGA
Trigger: AGCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGT...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGTTAGCAGCATCGGCGTaGACTGGATCTCTACAAGCT +
Preference number: 2 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERLAASA*TGSLQA
Trigger: AGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAA...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGCTGTCCAAAGGCACTaGTGGAGCGGCAGTTTGGAG +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLAVQRH*WSGSLE
Trigger: CTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CAA 90 bp CCAACAGCGCCGCGAAGAGGCTCTCCCCGTTGGCGGAGGACCCGCTaGCACTTCCTCTGGGCTCTGGATTCTAACACACACAGGAGACAC +
Preference number: 2 (lower is better)
Translates to: PTAPRRGSPRWRRTR*HFLWALDSNTHRRH
Trigger: GTGTCTCCTGTGTGTGTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCTTCGCGGCGCTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCACTGCGGCTGGGGCTaGAGGGCCGGGCTCAGGCAC +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQHCGWG*RAGLRH
Trigger: GTGCCTGAGCCCGGCCCTGCAGCCCCAGCCGCAGTG...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAACACCTGCAGAGCTCTaGAGCCCGTCCTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRTPAEL*SPSSEL
Trigger: CAGCTCTGAGGACGGGCTGCAGAGCTCTGCAGGTGT...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp ACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTAGCTCGCTGGCTGGCTaGTCTGACAGCATTCCTGAG +
Preference number: 2 (lower is better)
Translates to: TAVCARTERQSPWASCLTSSLAG*SDSIPE
Trigger: CTCAGGAATGCTGTCAGACCAGCCAGCCAGCGAGCT...AGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCATTGCCTAGAGCTCGCTaGCTGGCTGGTCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASLPRAR*LAGLTA
Trigger: TGCTGTCAGACCAGCCAGCCAGCGAGCTCTAGGCAA...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAGCTCCCTTTGGGAGGTaGCCTTCAGACACTGCGGCT +
Preference number: 2 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRAPFGR*PSDTAA
Trigger: AGCCGCAGTGTCTGAAGGCCACCTCCCAAAGGGAGC...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAGCAACGTGCTCCCTTTaGGAGGTGGCCTTCAGACAC +
Preference number: 2 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASATCSL*EVAFRH
Trigger: GTGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGC...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGTTGCAGACTGCAAATaGGACCTGAGACCACCCCGA +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLVADCK*DLRPPR
Trigger: TCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAAC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp ACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTATCGGCACGGGAGTTTaGAAAGGCAACGTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: TAVCARTERQSPWASCLTIGTGV*KGNVLP
Trigger: AGGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGAT...AGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAAAGCCCAGCAAACACTaGCACACAGCCTCGAGCACT +
Preference number: 2 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASKPSKH*HTASST
Trigger: AGTGCTCGAGGCTGTGTGTCAGTGTTTGCTGGGCTT...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGTTTCCATGTCCTTTTaGCTAGAGCTCGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLVSMSF*LELAGW
Trigger: CCAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAAC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCTTTGAAAAGGCAACGTaGTCCCTTTGGGAGGTGGCC +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLFEKAT*SLWEVA
Trigger: GGCCACCTCCCAAAGGGAGCACGTTGCCTTTTCAAA...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCTGACCGACAGCCGTaGGGGCTGCTCAACGACGAC +
Preference number: 2 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGSDRQP*GLLNDD
Trigger: GTCGTCGTTGAGCAGCCCCCACGGCTGTCGGTCAGA...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAAGCTCGCTGGCTGGCTaGTCTGACAGCATTCCTGAG +
Preference number: 2 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRSSLAG*SDSIPE
Trigger: CTCAGGAATGCTGTCAGACCAGCCAGCCAGCGAGCT...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAGCAACGTGCTCCCTTTaGGAGGTGGCCTTCAGACAC +
Preference number: 2 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRATCSL*EVAFRH
Trigger: GTGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGC...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGGAAACGCTATGTGCTaGCAACTGTGTGTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLGNAMC*QLCVSR
Trigger: TCTGCTCACACACAGTTGGCAGCACATAGCGTTTCC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTTCTGACCGACAGCCGTaGGGGCTGCTCAACGACGAC +
Preference number: 2 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPSDRQP*GLLNDD
Trigger: GTCGTCGTTGAGCAGCCCCCACGGCTGTCGGTCAGA...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CAA 90 bp CGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTaGGAGAAACTCAAGATTCCTCCAGCGTCTGTGGGCTTCCCGAAA +
Preference number: 2 (lower is better)
Translates to: RRTGTAVQRHWWSGS*EKLKIPPASVGFPK
Trigger: TTTCGGGAAGCCCACAGACGCTGGAGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCACACACCCAAGAGTCTaGCCGACAGCCGTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: VSSPSSWGINKSSASGLATHPRV*PTAVGA
Trigger: AGCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGT...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCAGGGTGGGAAGGGCTaGGCCTGCTGTAGGGGCGTA +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQQGGKG*ACCRGV
Trigger: TACGCCCCTACAGCAGGCTCAGCCCTTCCCACCCTG...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAGCACCGCTGTGTGTaGACGGACGGAGCGGCAGTC +
Preference number: 2 (lower is better)
Translates to: GRTTQEGVSNNSPATRITEHRCV*TDGAAV
Trigger: GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTC...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCGATGGGAGAGCCGTCTaGAAGGGGACCTGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGDGRAV*KGTWFL
Trigger: CAGAAACCAGGTCCCCTTGCAGACGGCTCTCCCATC...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACAAAGCCAAGGGTGAGCTaGAGAGGGGCTCGGGGCTCG +
Preference number: 2 (lower is better)
Translates to: STARESSMLSPDENAVLTKPRVS*RGARGS
Trigger: CGAGCCCCGAGCCCCTCTGCAGCTCACCCTTGGCTT...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAAGCCAAGGGTGAGCTaGAGAGGGGCTCGGGGCTCG +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQKPRVS*RGARGS
Trigger: CGAGCCCCGAGCCCCTCTGCAGCTCACCCTTGGCTT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAGCCCGTCCTCAGAGCTaGGAAGGGATCCTAGGCACG +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPARPQS*EGILGT
Trigger: CGTGCCTAGGATCCCTTCCCAGCTCTGAGGACGGGC...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCGAGCGGCAGTCACCGTaGGCATCCTGTCTCACTCCG +
Preference number: 2 (lower is better)
Translates to: VSSPSSWGINKSSASGLAERQSP*ASCLTP
Trigger: CGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTC...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAGAGCGGCAGTCACCGTaGGCATCCTGTCTCACTCCG +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPERQSP*ASCLTP
Trigger: CGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTC...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAAGCTCGCCAAGCAGCTaGGGCATTAACAAAAGCTCT +
Preference number: 2 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASSSPSS*GINKSS
Trigger: AGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCT...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCACCTGGCAGGTAGCTaGACAAGTGAGCTGGGCCCA +
Preference number: 2 (lower is better)
Translates to: VSNNSPATRITALLSPTAHLAGS*TSELGP
Trigger: TGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTG...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAGAGGCTCTCCCCGTTaGCGGAGGACCCGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQRGSPR*RRTRLH
Trigger: GTGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGACTCAGGGAAGACTTGTaGGTTAGAAAAGCCGTCTGC +
Preference number: 2 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRLREDL*VRKAVC
Trigger: GCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGAG...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAGCTGTGCTAACAGGGTaGCCCAGAGGCAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPAVLTG*PRGRFP
Trigger: GGGAAACCTGCCTCTGGGTCACCCTGTTAGCACAGC...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGACAGCCGTGGGGGCTaGTCAACGACGACAAACCCC +
Preference number: 2 (lower is better)
Translates to: GRTTQEGVSNNSPATRITDSRGG*STTTNP
Trigger: GGGGTTTGTCGTCGTTGAGCAGCCCCCACGGCTGTC...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACACACTCCGTGTTGTGCTaGTGGGCATGGGGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: GRTTQEGVSNNSPATRITHSVLC*WAWGRV
Trigger: CACCCTGCCCCATGCCCAGCAGCACAACACGGAGTG...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCTCTCACTCCGTGTTGTaGTGCTGGGCATGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: VSSPSSWGINKSSASGLASHSVL*CWAWGR
Trigger: CCTGCCCCATGCCCAGCAGCACAACACGGAGTGAGA...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGGATGGGAGAGCCGTCTaGAAGGGGACCTGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: VSNNSPATRITALLSPTADGRAV*KGTWFL
Trigger: CAGAAACCAGGTCCCCTTGCAGACGGCTCTCCCATC...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCACACCTGGCAGGTAGCTaGACAAGTGAGCTGGGCCCA +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPHLAGS*TSELGP
Trigger: TGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTG...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp CAAAGCTTACACCATGAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCAGAGGCTCTCCCCGTTaGCGGAGGACCCGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: QSLHHEQLTRTTTIPMGARGSPR*RRTRLH
Trigger: GTGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCT...GGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
3UTR-3UTR TCA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTACACACCCAAGAGTCTaGCCGACAGCCGTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: QALSLAASACTGSLQATVTHPRV*PTAVGA
Trigger: AGCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGT...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCGCTGCCAACTGTGTGTaGGCAGATGACTTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGAANCV*ADDLQE
Trigger: TTCCTGCAAGTCATCTGCTCACACACAGTTGGCAGC...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGAGCGAGGGGCCTCGATaGGAATCAGACTTAGGGAGA +
Preference number: 2 (lower is better)
Translates to: VSNNSPATRITALLSPTASEGPR*ESDLGR
Trigger: TCTCCCTAAGTCTGATTCTCATCGAGGCCCCTCGCT...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCATGCTGTCTCCCGATaGGAACGCTGTGCTAACAGG +
Preference number: 2 (lower is better)
Translates to: VSNNSPATRITALLSPTAHAVSR*ERCANR
Trigger: CCTGTTAGCACAGCGTTCTCATCGGGAGACAGCATG...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCGTTTCCATGTCCTTTTaGCTAGAGCTCGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSVSMSF*LELAGW
Trigger: CCAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAAC...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAGTTAGAAAAGCCGTCTaGAAGGCCAGCTGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRVRKAV*KASWFL
Trigger: CAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAAC...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGTTAGCAGCATCGGCGTaGACTGGATCTCTACAAGCT +
Preference number: 2 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGLAASA*TGSLQA
Trigger: AGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAA...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGGAAGGAAACGCTATGTaGTGCCAACTGTGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGEGNAM*CQLCVS
Trigger: GCTCACACACAGTTGGCAGCACATAGCGTTTCCTTC...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGCGAGAGAGAGTTCCATaGTGTCTCCCGATGAGAACG +
Preference number: 2 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKRERVP*CLPMRT
Trigger: CGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCG...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAGTCTGCAAGGCCAGCTaGTTTTTGTGTTTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASVCKAS*FLCFCH
Trigger: ATGACAGAAACACAAAAACCAGCTGGCCTTGCAGAC...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGGGGTTGGGCAGTGGGTaGCTAAGGGGAGAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQGLGSG*LRGEEH
Trigger: GTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCC...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCCTGTGTCTTTGCCGTTaGGTTGGGCAGTGGGTGGCT +
Preference number: 2 (lower is better)
Translates to: VSSPSSWGINKSSASGLALCLCR*VGQWVA
Trigger: AGCCACCCACTGCCCAACCCAACGGCAAAGACACAG...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCGTCTGCAAGGGGACCTaGTTTCTGTGTCTTTGCCGT +
Preference number: 2 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGVCKGT*FLCLCR
Trigger: ACGGCAAAGACACAGAAACCAGGTCCCCTTGCAGAC...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCATTCCTCCAGCGTCTGTaGGCTTCCCGAAAGGTCAGC +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPFLQRL*ASRKVS
Trigger: GCTGACCTTTCGGGAAGCCCACAGACGCTGGAGGAA...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCATTCTCCTTTAAAACGTaGTCATCGGCACTCATCTCC +
Preference number: 2 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASFSFKT*SSALIS
Trigger: GGAGATGAGTGCCGATGACCACGTTTTAAAGGAGAA...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTGCAAAGCAAGCTGTGTaGTTAGGTGTTCCGTATTCA +
Preference number: 2 (lower is better)
Translates to: LQGRAQALSLAASACTGSAKQAV*LGVPYS
Trigger: TGAATACGGAACACCTAATCACACAGCTTGCTTTGC...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGCTCAGGGAAGACTTGTaGGTTAGAAAAGCCGTCTGC +
Preference number: 2 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKLREDL*VRKAVC
Trigger: GCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGAG...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCATGTAGGGGCGTAAGGTaGATCCACACCTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPCRGVR*IHTCRA
Trigger: AGCTCTGCAGGTGTGGATTCACCTTACGCCCCTACA...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGAGACACAGCGAAAGCTaGCCCAGAAGGCAAACAAAG +
Preference number: 2 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKRHSES*PRRQTK
Trigger: CTTTGTTTGCCTTCTGGGTCAGCTTTCGCTGTGTCT...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp CAAAGCTTACACCATGAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCACACCTGCAGAGCTCTaGAGCCCGTCCTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: QSLHHEQLTRTTTIPMGATPAEL*SPSSEL
Trigger: CAGCTCTGAGGACGGGCTGCAGAGCTCTGCAGGTGT...GGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
3UTR-3UTR GCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGGGAAACGCTATGTGCTaGCAACTGTGTGTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKGNAMC*QLCVSR
Trigger: TCTGCTCACACACAGTTGGCAGCACATAGCGTTTCC...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCACACAGCCTCGAGCACTaGGAGAGAGAGTTCCATGCT +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPHSLEH*EREFHA
Trigger: AGCATGGAACTCTCTCTCGCAGTGCTCGAGGCTGTG...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCGGTGGAGCGGCAGTTTaGAGAAACTCAAGATTCCTC +
Preference number: 2 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGGGAAV*RNSRFL
Trigger: GAGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACC...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCCAGAGGGGACCAGCTTaGAATGCAATGTATTTTAAA +
Preference number: 2 (lower is better)
Translates to: PCYANHSAAVANSAAKRLQRGPA*NAMYFK
Trigger: TTTAAAATACATTGCATTCCAAGCTGGTCCCCTCTG...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGTGTAGGGGCGTAAGGTaGATCCACACCTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQCRGVR*IHTCRA
Trigger: AGCTCTGCAGGTGTGGATTCACCTTACGCCCCTACA...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAGCGAGGGGCCTCGATaGGAATCAGACTTAGGGAGA +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQSEGPR*ESDLGR
Trigger: TCTCCCTAAGTCTGATTCTCATCGAGGCCCCTCGCT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACACCTGGGATATGTGACTaGGCCACAGCAACATTCGGG +
Preference number: 2 (lower is better)
Translates to: GRTTQEGVSNNSPATRITPGICD*ATATFG
Trigger: CCCGAATGTTGCTGTGGCTCAGTCACATATCCCAGG...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGGGGCCCTGGGATATGTaGCTGAGCCACAGCAACATT +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQGPWDM*LSHSNI
Trigger: AATGTTGCTGTGGCTCAGTCACATATCCCAGGGCCC...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCTTTGAAAAGGCAACGTaGTCCCTTTGGGAGGTGGCC +
Preference number: 2 (lower is better)
Translates to: VSSPSSWGINKSSASGLAFEKAT*SLWEVA
Trigger: GGCCACCTCCCAAAGGGAGCACGTTGCCTTTTCAAA...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTTTGCCTAGAGCTCGCTaGCTGGCTGGTCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: QALSLAASACTGSLQATVLPRAR*LAGLTA
Trigger: TGCTGTCAGACCAGCCAGCCAGCGAGCTCTAGGCAA...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGGCTGCCAACTGTGTGTaGGCAGATGACTTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQAANCV*ADDLQE
Trigger: TTCCTGCAAGTCATCTGCTCACACACAGTTGGCAGC...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAGAAGAGGAATGTTTCTaGAAGAAGGAAACGCTATGT +
Preference number: 2 (lower is better)
Translates to: SGEQARLSKGTGGAAVWREEECF*KKETLC
Trigger: ACATAGCGTTTCCTTCTTTCAGAAACATTCCTCTTC...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACAGTCTGCAAGGGGACCTaGTTTCTGTGTCTTTGCCGT +
Preference number: 2 (lower is better)
Translates to: STARESSMLSPDENAVLTVCKGT*FLCLCR
Trigger: ACGGCAAAGACACAGAAACCAGGTCCCCTTGCAGAC...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGTTCTCCTTTAAAACGTaGTCATCGGCACTCATCTCC +
Preference number: 2 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKFSFKT*SSALIS
Trigger: GGAGATGAGTGCCGATGACCACGTTTTAAAGGAGAA...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCACGCTTGCACTTCCTCTaGGCTCTGGATTCTAACACA +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPRLHFL*ALDSNT
Trigger: TGTGTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCG...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACACTCAGGGAAGACTTGTaGGTTAGAAAAGCCGTCTGC +
Preference number: 2 (lower is better)
Translates to: STARESSMLSPDENAVLTLREDL*VRKAVC
Trigger: GCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGAG...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACAGATTTCTCAGTAGAGTaGTACACAGAGGGGACCAGC +
Preference number: 2 (lower is better)
Translates to: STARESSMLSPDENAVLTDFSVE*YTEGTS
Trigger: GCTGGTCCCCTCTGTGTATCACTCTACTGAGAAATC...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCTCTGCCTTACAATACGTTTCCATGTCCTTTTaGCTAGAGCTCGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: EQLTRTTTIPMGASALQYVSMSF*LELAGW
Trigger: CCAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAAC...GTATTGTAAGGCAGAGGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
3UTR-3UTR GCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCGTTAGAAAAGCCGTCTaGAAGGCCAGCTGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: VSSPSSWGINKSSASGLAVRKAV*KASWFL
Trigger: CAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAAC...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGGAAGGAAACGCTATGTaGTGCCAACTGTGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQEGNAM*CQLCVS
Trigger: GCTCACACACAGTTGGCAGCACATAGCGTTTCCTTC...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTTTGCCTAGAGCTCGCTaGCTGGCTGGTCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: SGKTCELEKPSARPAGFCLPRAR*LAGLTA
Trigger: TGCTGTCAGACCAGCCAGCCAGCGAGCTCTAGGCAA...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAGCATCGGCGTGCACTaGATCTCTACAAGCTACTGT +
Preference number: 2 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQSIGVH*ISTSYC
Trigger: ACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATCTGTGTCTTTGCCGTTaGGTTGGGCAGTGGGTGGCT +
Preference number: 2 (lower is better)
Translates to: SVYSSASTVIEARGLDENLCLCR*VGQWVA
Trigger: AGCCACCCACTGCCCAACCCAACGGCAAAGACACAG...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCTCTGCCTTACAATACGTCCAAAGGCACTGGTaGAGCGGCAGTTTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: EQLTRTTTIPMGASALQYVQRHW*SGSLEK
Trigger: TTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGAC...GTATTGTAAGGCAGAGGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
3UTR-3UTR TCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAGCAAAGCAAGCTGTGTaGTTAGGTGTTCCGTATTCA +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPAKQAV*LGVPYS
Trigger: TGAATACGGAACACCTAATCACACAGCTTGCTTTGC...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCTCTGCCTTACAATACAGACACAGCGAAAGCTaGCCCAGAAGGCAAACAAAG +
Preference number: 2 (lower is better)
Translates to: EQLTRTTTIPMGASALQYRHSES*PRRQTK
Trigger: CTTTGTTTGCCTTCTGGGTCAGCTTTCGCTGTGTCT...GTATTGTAAGGCAGAGGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
3UTR-3UTR GCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCAACATTCGGGTaGCAATTAAGAGGACGCTTT +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPTATFG*QLRGRF
Trigger: AAAGCGTCCTCTTAATTGGCACCCGAATGTTGCTGT...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATTGGTTTCTGTGTCTTTaGCGTTGGGTTGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: SVYSSASTVIEARGLDENWFLCL*RWVGQW
Trigger: CCACTGCCCAACCCAACGGCAAAGACACAGAAACCA...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAACAGCAACATTCGGGTaGCAATTAAGAGGACGCTTT +
Preference number: 2 (lower is better)
Translates to: GRTTQEGVSNNSPATRITTATFG*QLRGRF
Trigger: AAAGCGTCCTCTTAATTGGCACCCGAATGTTGCTGT...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTCGCTCCGGACCGGGCTaGGCGTCACTGTTGCAGACT +
Preference number: 2 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVRSGPG*ASLLQT
Trigger: AGTCTGCAACAGTGACGCGCAGCCCGGTCCGGAGCG...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGGTCCTCAATTAAACTaGGTCAGAAAAAGAGGAACG +
Preference number: 2 (lower is better)
Translates to: GRTTQEGVSNNSPATRITGPQLN*VRKRGT
Trigger: CGTTCCTCTTTTTCTGACGCAGTTTAATTGAGGACC...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCACAGAGGGGACCAGCTTaGAATGCAATGTATTTTAAA +
Preference number: 2 (lower is better)
Translates to: EGVSNNSPATRITALLSPQRGPA*NAMYFK
Trigger: TTTAAAATACATTGCATTCCAAGCTGGTCCCCTCTG...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAAGAGGAATGTTTCTaGAAGAAGGAAACGCTATGT +
Preference number: 2 (lower is better)
Translates to: GRTTQEGVSNNSPATRITEEECF*KKETLC
Trigger: ACATAGCGTTTCCTTCTTTCAGAAACATTCCTCTTC...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTTCTCACTCCGTGTTGTaGTGCTGGGCATGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVSHSVL*CWAWGR
Trigger: CCTGCCCCATGCCCAGCAGCACAACACGGAGTGAGA...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTGCTCCCTTTGGGAGGTaGCCTTCAGACACTGCGGCT +
Preference number: 2 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVAPFGR*PSDTAA
Trigger: AGCCGCAGTGTCTGAAGGCCACCTCCCAAAGGGAGC...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp ATATGCGTCTTATGTGTACACAGTATAGCTATGAGGAACAGATCTTATTTTGAGTCTGACCGACAGCCGTaGGGGCTGCTCAACGACGAC +
Preference number: 2 (lower is better)
Translates to: ICVLCVHSIAMRNRSYFESDRQP*GLLNDD
Trigger: GTCGTCGTTGAGCAGCCCCCACGGCTGTCGGTCAGA...CTCAAAATAAGATCTGTTCCTCATAGCTATACTGTGTACACATAAGACGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275364.8
3UTR-3UTR CCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAGGGTTGGGCAGTGGGTaGCTAAGGGGAGAAGAGCAC +
Preference number: 2 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKGLGSG*LRGEEH
Trigger: GTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCC...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTGCTGCGCGTCACTGTTaGAGACTGCAAATGGGACCT +
Preference number: 2 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVAARHC*RLQMGP
Trigger: AGGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGC...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAATTCCTCCAGCGTCTGTaGGCTTCCCGAAAGGTCAGC +
Preference number: 2 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKFLQRL*ASRKVS
Trigger: GCTGACCTTTCGGGAAGCCCACAGACGCTGGAGGAA...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR TCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAGGGCCCTGGGATATGTaGCTGAGCCACAGCAACATT +
Preference number: 2 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKGPWDM*LSHSNI
Trigger: AATGTTGCTGTGGCTCAGTCACATATCCCAGGGCCC...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTTTAGCAGCATCGGCGTaGACTGGATCTCTACAAGCT +
Preference number: 2 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVLAASA*TGSLQA
Trigger: AGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAA...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAATGGTTTCTGTGTCTTTaGCGTTGGGTTGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKWFLCL*RWVGQW
Trigger: CCACTGCCCAACCCAACGGCAAAGACACAGAAACCA...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR GCA 90 bp ATATGCGTCTTATGTGTACACAGTATAGCTATGAGGAACAGATCTTATTTTGAGCACAGCCTCGAGCACTaGGAGAGAGAGTTCCATGCT +
Preference number: 2 (lower is better)
Translates to: ICVLCVHSIAMRNRSYFEHSLEH*EREFHA
Trigger: AGCATGGAACTCTCTCTCGCAGTGCTCGAGGCTGTG...CTCAAAATAAGATCTGTTCCTCATAGCTATACTGTGTACACATAAGACGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
3UTR-3UTR CCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAAGCATCGGCGTGCACTaGATCTCTACAAGCTACTGT +
Preference number: 2 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKSIGVH*ISTSYC
Trigger: ACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp CGGACCGGGCTGCGCGTCACTGTTGCAGACTGCAAATaGGACCTGAGACCACCCCGAGGGCCCCACCAGGAG +
Preference number: 3 (lower is better)
Translates to: RTGLRVTVADCK*DLRPPRGPHQE
Trigger: CTCCTGGTGGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGCCCGGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 72 bp AGTGGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTaGACGGACGGAGCGGCAGTCACCGTGGGCATCCTG +
Preference number: 3 (lower is better)
Translates to: SGWLRGEEHRCV*TDGAAVTVGIL
Trigger: CAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp ACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTaGGCATCCTGTCTCACTCCGTGTTGTGCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: TAVCARTERQSP*ASCLTPCCAAG
Trigger: CCCAGCAGCACAACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGGCTGCGCGTCACTGTaGCAGACTGCAAATGGGACC +
Preference number: 3 (lower is better)
Translates to: PCYANHSAAVANSAAKRLGCASL*QTANGT
Trigger: GGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGCC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 72 bp GGCTGCGCGTCACTGTTGCAGACTGCAAATGGGACCTaGGACCACCCCGAGGGCCCCACCAGGAGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: GCASLLQTANGT*DHPEGPTRSSL
Trigger: AAGAGAGCTCCTGGTGGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGTGGCGGAGGACCCGCTaGCACTTCCTCTGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKWRRTR*HFLWAL
Trigger: CAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCA...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGAAGAGGCTCTCCCCGTaGGCGGAGGACCCGCTTGCA +
Preference number: 3 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKKRLSP*AEDPLA
Trigger: TGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCTT...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp TCGGCACGGGAGTTTGAAAAGGCAACGTGCTCCCTTTaGGAGGTGGCCTTCAGACACTGCGGCTGGGGCTGC +
Preference number: 3 (lower is better)
Translates to: SAREFEKATCSL*EVAFRHCGWGC
Trigger: GCAGCCCCAGCCGCAGTGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 72 bp TTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTaGTGTCGCCAACAGCGCCGCGAAGAGGCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: FQTTPLLRESQR*CRQQRREEALP
Trigger: GGGGAGAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAAGTTTCCATGTCCTTTaGCCTAGAGCTCGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASSFHVL*PRARWL
Trigger: CAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAACT...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAAAGAGGCTCTCCCCGTaGGCGGAGGACCCGCTTGCA +
Preference number: 3 (lower is better)
Translates to: EGVSNNSPATRITALLSPKRLSP*AEDPLA
Trigger: TGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCTT...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp GGTTTCTGTGTCTTTGCCGTTGGGTTGGGCAGTGGGTaGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACG +
Preference number: 3 (lower is better)
Translates to: GFCVFAVGLGSG*LRGEEHRCVCT
Trigger: CGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCCAACGGCAAAGACACAGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp TCTCCCCGTTGGCGGAGGACCCGCTTGCACTTCCTCTaGGCTCTGGATTCTAACACACACAGGAGACACAGC +
Preference number: 3 (lower is better)
Translates to: SPRWRRTRLHFL*ALDSNTHRRHS
Trigger: GCTGTGTCTCCTGTGTGTGTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCAACGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTGGCAACGTGCTCCCTTaGGGAGGTGGCCTTCAGACA +
Preference number: 3 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPGNVLP*GGGLQT
Trigger: TGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGCC...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCGGCAACGTGCTCCCTTaGGGAGGTGGCCTTCAGACA +
Preference number: 3 (lower is better)
Translates to: VSSPSSWGINKSSASGLAGNVLP*GGGLQT
Trigger: TGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGCC...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCAATCGGCACGGGAGTTaGAAAAGGCAACGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGNRHGS*KRQRAP
Trigger: GGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGATT...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGCTGGTTTCTGTGTCTTaGCCGTTGGGTTGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKLVSVS*PLGWAV
Trigger: CACTGCCCAACCCAACGGCAAAGACACAGAAACCAG...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 72 bp CTCAAGGACCACACAGACAACACACACCCAAGAGTCTaGCCGACAGCCGTGGGGGCTGCTCAACGACGACAA +
Preference number: 3 (lower is better)
Translates to: LKDHTDNTHPRV*PTAVGAAQRRQ
Trigger: TTGTCGTCGTTGAGCAGCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp GAGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTaGAGCGGCAGTTTGGAGAAACTCAAGATTCCTCCA +
Preference number: 3 (lower is better)
Translates to: ERRTGTAVQRHW*SGSLEKLKIPP
Trigger: TGGAGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp GGAGAGCGGCGAACAGGCACGGCTGTCCAAAGGCACTaGTGGAGCGGCAGTTTGGAGAAACTCAAGATTCCT +
Preference number: 3 (lower is better)
Translates to: GERRTGTAVQRH*WSGSLEKLKIP
Trigger: AGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 72 bp GGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTaGACTGGATCTCTACAAGCTACTGTTAGGCAAAGC +
Preference number: 3 (lower is better)
Translates to: GRAQALSLAASA*TGSLQATVRQS
Trigger: GCTTTGCCTAACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 72 bp CTTAGGAAATCGGCACGGGAGTTTGAAAAGGCAACGTaGTCCCTTTGGGAGGTGGCCTTCAGACACTGCGGC +
Preference number: 3 (lower is better)
Translates to: LRKSAREFEKAT*SLWEVAFRHCG
Trigger: GCCGCAGTGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGATTTCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR GCA 72 bp CCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTaGTACGCGAATCACAGCGCTGCTGTCGCCAACAGC +
Preference number: 3 (lower is better)
Translates to: PDYSGRCFKQLP*YANHSAAVANS
Trigger: GCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp GTTGGCGGAGGACCCGCTTGCACTTCCTCTGGGCTCTaGATTCTAACACACACAGGAGACACAGCGAAAGCT +
Preference number: 3 (lower is better)
Translates to: VGGGPACTSSGL*ILTHTGDTAKA
Trigger: AGCTTTCGCTGTGTCTCCTGTGTGTGTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTAGTTTCCATGTCCTTTaGCCTAGAGCTCGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPSFHVL*PRARWL
Trigger: CAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAACT...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAAATCGGCACGGGAGTTaGAAAAGGCAACGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: EGVSNNSPATRITALLSPNRHGS*KRQRAP
Trigger: GGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGATT...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 72 bp TTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATaGGAATCAGACTTAGGGAGAGCGGCGAACAGGCAC +
Preference number: 3 (lower is better)
Translates to: FCKHSHRSEGPR*ESDLGRAANRH
Trigger: GTGCCTGTTCGCCGCTCTCCCTAAGTCTGATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp CGTGACAGTTTCCATGTCCTTTTGCCTAGAGCTCGCTaGCTGGCTGGTCTGACAGCATTCCTGAGCCAGGTA +
Preference number: 3 (lower is better)
Translates to: RDSFHVLLPRAR*LAGLTAFLSQV
Trigger: TACCTGGCTCAGGAATGCTGTCAGACCAGCCAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAACTGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CCA 72 bp CTTCCCGAAAGGTCAGCTGTTAGCTCGCCAAGCAGCTaGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: LPERSAVSSPSS*GINKSSASGLA
Trigger: GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAACAGCTGACCTTTCGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCAGTTTCCATGTCCTTTaGCCTAGAGCTCGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: VSSPSSWGINKSSASGLASFHVL*PRARWL
Trigger: CAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAACT...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGTGGTGGAGCGGCAGTTaGGAGAAACTCAAGATTCCT +
Preference number: 3 (lower is better)
Translates to: VSNNSPATRITALLSPTAWWSGS*EKLKIP
Trigger: AGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACCA...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAATCTGCCCCAAGGGCTaGCGTTTACCGGGTTTGCGG +
Preference number: 3 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKICPKG*RLPGLR
Trigger: CCGCAAACCCGGTAAACGCAAGCCCTTGGGGCAGAT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 72 bp AAAGCTTTCAGGTTAGTCTGTCTCAGGGAAGACTTGTaGGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTT +
Preference number: 3 (lower is better)
Translates to: KAFRLVCLREDL*VRKAVCKASWF
Trigger: AAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGAGACAGACTAACCTGAAAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR TCA 72 bp CTCCCAATGTTAATACACTGTGCAAAGCTTACACCATaGACAACTGACCCGGACCACTACCATTCCAATGGG +
Preference number: 3 (lower is better)
Translates to: LPMLIHCAKLTP*TTDPDHYHSNG
Trigger: CCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTGCACAGTGTATTAACATTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
3UTR-3UTR CAA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTCTGGTTTCTGTGTCTTaGCCGTTGGGTTGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVLVSVS*PLGWAV
Trigger: CACTGCCCAACCCAACGGCAAAGACACAGAAACCAG...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTTTGCGTTTACCGGGTTaGCGGAAAACAAGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVLRLPG*RKTSQG
Trigger: CCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAA...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR-3UTR CAA 90 bp ATATGCGTCTTATGTGTACACAGTATAGCTATGAGGAACAGATCTTATTTTGAGAATGACAGTTTAGCCTaGCAGAGTTTCCTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: ICVLCVHSIAMRNRSYFENDSLA*QSFLLL
Trigger: GAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATT...CTCAAAATAAGATCTGTTCCTCATAGCTATACTGTGTACACATAAGACGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR GCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGCACTGCGGCTGGGGCTaGAGGGCCGGGCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERHCGWG*RAGLRH
Trigger: GTGCCTGAGCCCGGCCCTGCAGCCCCAGCCGCAGTG...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGTGTGCGGGTCGCCCCTaGAGTCCGGGAAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERCAGRP*SPGSAS
Trigger: AGAAGCACTTCCCGGACTTCAGGGGCGACCCGCACA...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCACACTGCGGCTGGGGCTaGAGGGCCGGGCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASHCGWG*RAGLRH
Trigger: GTGCCTGAGCCCGGCCCTGCAGCCCCAGCCGCAGTG...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAAGCCCCGCCGGCCACTaGCCCAGGACTCAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASSPAGH*PRTQRA
Trigger: GGCACGCTGAGTCCTGGGCCAGTGGCCGGCGGGGCT...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR TCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCGGTGGGGTCAGCGCTaGGCGGGTCAAGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSRWGQR*AGQEPA
Trigger: CGCGGGCTCTTGACCCGCTCAGCGCTGACCCCACCG...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTCCCCAGACACTCCCGTaGGGCCCGTGCCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: VCARTERQSPWASCLTPCPQTLP*GPCQGL
Trigger: GAGACCCTGGCACGGGCCCCACGGGAGTGTCTGGGG...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR TCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGGCTCCCTACCAGCCTTaGGTGAGAGACCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERAPYQP*VRDHKQ
Trigger: CTGCTTGTGGTCTCTCACTCAAGGCTGGTAGGGAGC...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR GCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCACTCAGCAAGGCCAAGTaGCTCGGCCAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASLSKAK*LGQGGG
Trigger: CCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAG...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGATCCCGTCGAAGCACTaGAACCACTTCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERIPSKH*NHFWRW
Trigger: CCAGCGCCAGAAGTGGTTCCAGTGCTTCGACGGGAT...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCTGCGCCTGTCCTCCATaGGGACCTGGTCGTACTCGC +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVCACPP*GPGRTR
Trigger: GCGAGTACGACCAGGTCCTCATGGAGGACAGGCGCA...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGTGTAGGGGCGTAAGGTaGATCCACACCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERCRGVR*IHTCRA
Trigger: AGCTCTGCAGGTGTGGATTCACCTTACGCCCCTACA...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGGGGCCCTGGGATATGTaGCTGAGCCACAGCAACATT +
Preference number: 4 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERGPWDM*LSHSNI
Trigger: AATGTTGCTGTGGCTCAGTCACATATCCCAGGGCCC...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAACGTCCTCCAGCCTGTaGGGGTCGCCCCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASTSSSL*GSPLKS
Trigger: GGACTTCAGGGGCGACCCGCACAGGCTGGAGGACGT...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCGCTCCGGACCGGGCTaGGCGTCACTGTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: KSTAVCARTERQSPWASCRSGPG*ASLLQT
Trigger: AGTCTGCAACAGTGACGCGCAGCCCGGTCCGGAGCG...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAGGCGGAGGACCCGCTTaGACTTCCTCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASGGGPA*TSSGLW
Trigger: CCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCC...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTTCCGAGCCCTGCTCGTaGAGCCATTGGTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VCARTERQSPWASCLTPCSEPCS*SHWCCG
Trigger: GCCGCAGCACCAATGGCTCCACGAGCAGGGCTCGGA...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTAAGCCAAGGGTGAGCTaGAGAGGGGCTCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSKPRVS*RGARGS
Trigger: CGAGCCCCGAGCCCCTCTGCAGCTCACCCTTGGCTT...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAGGCGGAGGACCCGCTTaGACTTCCTCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRGGGPA*TSSGLW
Trigger: CCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCC...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTTCGTGGAGCCATTGGTaGTGCGGCGGGGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KSTAVCARTERQSPWASCSWSHW*CGGEKR
Trigger: CCTCTTCTCCCCGCCGCAGCACCAATGGCTCCACGA...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCGTACAGCTGGAAGGTaGCCGGCTCCACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSRTAGR*PAPQAA
Trigger: GGCTGCCTGTGGAGCCGGCCACCTTCCAGCTGTACG...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR CCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAGCCGGGACGTACAGCTaGAAGGTGGCCGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRAGTYS*KVAGST
Trigger: TGTGGAGCCGGCCACCTTCCAGCTGTACGTCCCGGC...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR CCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCGCGGTGGTGAAGTGGTaGAAGAGTGGCTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVAVVKW*KSGLLR
Trigger: CCGCAGCAAGCCACTCTTCCACCACTTCACCACCGC...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGCTCCCTTTGGGAGGTaGCCTTCAGACACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLAPFGR*PSDTAA
Trigger: AGCCGCAGTGTCTGAAGGCCACCTCCCAAAGGGAGC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCGGGTTGGGCAGTGGGTaGCTAAGGGGAGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVGLGSG*LRGEEH
Trigger: GTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCC...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGCTTTCGGTTTCCATCTaGTGTGCTTCCCGAACCACG +
Preference number: 4 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERLSVSI*CASRTT
Trigger: CGTGGTTCGGGAAGCACACCAGATGGAAACCGAAAG...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR TCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGACTGCAAATGGGACCTaGGACCACCCCGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGTANGT*DHPEGP
Trigger: GGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGT...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCCGGTGGGGTCAGCGCTaGGCGGGTCAAGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLARWGQR*AGQEPA
Trigger: CGCGGGCTCTTGACCCGCTCAGCGCTGACCCCACCG...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTGACAGCCGTGGGGGCTaGTCAACGACGACAAACCCC +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSDSRGG*STTTNP
Trigger: GGGGTTTGTCGTCGTTGAGCAGCCCCCACGGCTGTC...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTTCTCACTCCGTGTTGTaGTGCTGGGCATGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TAVCARTERQSPWASCLTSHSVL*CWAWGR
Trigger: CCTGCCCCATGCCCAGCAGCACAACACGGAGTGAGA...AGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCATCTCACTCCGTGTTGTaGTGCTGGGCATGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASSHSVL*CWAWGR
Trigger: CCTGCCCCATGCCCAGCAGCACAACACGGAGTGAGA...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGATGGGAGAGCCGTCTaGAAGGGGACCTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLDGRAV*KGTWFL
Trigger: CAGAAACCAGGTCCCCTTGCAGACGGCTCTCCCATC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCAAGCCAAGGGTGAGCTaGAGAGGGGCTCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGKPRVS*RGARGS
Trigger: CGAGCCCCGAGCCCCTCTGCAGCTCACCCTTGGCTT...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCTCTGCCCCAAGGGCTTaGGTTTACCGGGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLSAPRA*VYRVCG
Trigger: TCCGCAAACCCGGTAAACGCAAGCCCTTGGGGCAGA...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCGCCCAGGACTCAGCGTaGCGTTCCTCCAGGACGCAG +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGAQDSA*RSSRTQ
Trigger: CTGCGTCCTGGAGGAACGGCACGCTGAGTCCTGGGC...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CCA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTGCGGTGGTGAAGTGGTaGAAGAGTGGCTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KSTAVCARTERQSPWASCAVVKW*KSGLLR
Trigger: CCGCAGCAAGCCACTCTTCCACCACTTCACCACCGC...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCTTGCCTAGAGCTCGCTaGCTGGCTGGTCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVLPRAR*LAGLTA
Trigger: TGCTGTCAGACCAGCCAGCCAGCGAGCTCTAGGCAA...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTGCTCCCTTTGGGAGGTaGCCTTCAGACACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: VCARTERQSPWASCLTPCAPFGR*PSDTAA
Trigger: AGCCGCAGTGTCTGAAGGCCACCTCCCAAAGGGAGC...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGCAACGTGCTCCCTTTaGGAGGTGGCCTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLATCSL*EVAFRH
Trigger: GTGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAGCCCGTCCTCAGAGCTaGGAAGGGATCCTAGGCACG +
Preference number: 4 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRARPQS*EGILGT
Trigger: CGTGCCTAGGATCCCTTCCCAGCTCTGAGGACGGGC...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCCTGTGTCTTTGCCGTTaGGTTGGGCAGTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLLCLCR*VGQWVA
Trigger: AGCCACCCACTGCCCAACCCAACGGCAAAGACACAG...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCACCGACTCCCCCAGCTaGAACTCGCTTCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGTDSPS*NSLLRL
Trigger: CAGCCGGAGAAGCGAGTTTCAGCTGGGGGAGTCGGT...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR TCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCCCGGGAAGTGCTTCTTaGTGCTCACGGTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLPGSAS*CSRSSP
Trigger: AGGTGAAGACCGTGAGCATCAAGAAGCACTTCCCGG...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCATCGGCACGGGAGTTTaGAAAGGCAACGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVIGTGV*KGNVLP
Trigger: AGGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGAT...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCCAGGGTGGGAAGGGCTaGGCCTGCTGTAGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSQGGKG*ACCRGV
Trigger: TACGCCCCTACAGCAGGCTCAGCCCTTCCCACCCTG...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCAGCGAGGGGCCTCGATaGGAATCAGACTTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLSEGPR*ESDLGR
Trigger: TCTCCCTAAGTCTGATTCTCATCGAGGCCCCTCGCT...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAGCTGTGCTAACAGGGTaGCCCAGAGGCAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRAVLTG*PRGRFP
Trigger: GGGAAACCTGCCTCTGGGTCACCCTGTTAGCACAGC...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCAAGCCCAGCAAACACTaGCACACAGCCTCGAGCACT +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLKPSKH*HTASST
Trigger: AGTGCTCGAGGCTGTGTGTCAGTGTTTGCTGGGCTT...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGGTGGGGTCAGCGCTaGGCGGGTCAAGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQRWGQR*AGQEPA
Trigger: CGCGGGCTCTTGACCCGCTCAGCGCTGACCCCACCG...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCGGAAGAGTGGCTTGCTaGGGTTCCGTCTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVGRVAC*GSVSSC
Trigger: ACAGGAAGAGACGGAACCGCAGCAAGCCACTCTTCC...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGCACTCCGTGTTGTGCTaGTGGGCATGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGHSVLC*WAWGRV
Trigger: CACCCTGCCCCATGCCCAGCAGCACAACACGGAGTG...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTTCTCACTCCGTGTTGTaGTGCTGGGCATGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSSHSVL*CWAWGR
Trigger: CCTGCCCCATGCCCAGCAGCACAACACGGAGTGAGA...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGGAGCGGCAGTCACCGTaGGCATCCTGTCTCACTCCG +
Preference number: 4 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWERQSP*ASCLTP
Trigger: CGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTC...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCGTTGCAGACTGCAAATaGGACCTGAGACCACCCCGA +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVVADCK*DLRPPR
Trigger: TCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAAC...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CAA 72 bp CCGCGAAGAGGCTCTCCCCGTTGGCGGAGGACCCGCTaGCACTTCCTCTGGGCTCTGGATTCTAACACACAC +
Preference number: 4 (lower is better)
Translates to: PRRGSPRWRRTR*HFLWALDSNTH
Trigger: GTGTGTGTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCTTCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCACCGACTCCCCCAGCTaGAACTCGCTTCTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGTDSPS*NSLLRL
Trigger: CAGCCGGAGAAGCGAGTTTCAGCTGGGGGAGTCGGT...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR TCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTGTGCGGGTCGCCCCTaGAGTCCGGGAAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGCAGRP*SPGSAS
Trigger: AGAAGCACTTCCCGGACTTCAGGGGCGACCCGCACA...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCAGGGTGGGAAGGGCTaGGCCTGCTGTAGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: VSNNSPATRITALLSPTAQGGKG*ACCRGV
Trigger: TACGCCCCTACAGCAGGCTCAGCCCTTCCCACCCTG...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGGCTGTGCTAACAGGGTaGCCCAGAGGCAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGAVLTG*PRGRFP
Trigger: GGGAAACCTGCCTCTGGGTCACCCTGTTAGCACAGC...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTACTGCAAATGGGACCTaGGACCACCCCGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPTANGT*DHPEGP
Trigger: GGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGT...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTAATTCACCCCGGTCATaGGGAGGAGGAGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: KSTAVCARTERQSPWASCNSPRS*GGGGGS
Trigger: ACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAATT...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGTGCGGTCCGGCACTGTaGGTGTGCTCTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGCGPAL*VCSQGG
Trigger: TCCTCCTTGAGAGCACACTCACAGTGCCGGACCGCA...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCGACAGCCGTGGGGGCTaGTCAACGACGACAAACCCC +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSDSRGG*STTTNP
Trigger: GGGGTTTGTCGTCGTTGAGCAGCCCCCACGGCTGTC...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTTCTGCCCCAAGGGCTTaGGTTTACCGGGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSSAPRA*VYRVCG
Trigger: TCCGCAAACCCGGTAAACGCAAGCCCTTGGGGCAGA...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGATCTGCCCCAAGGGCTTaGGTTTACCGGGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRSAPRA*VYRVCG
Trigger: TCCGCAAACCCGGTAAACGCAAGCCCTTGGGGCAGA...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCACAGCCTCGAGCACTaGGAGAGAGAGTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: TAVCARTERQSPWASCLTHSLEH*EREFHA
Trigger: AGCATGGAACTCTCTCTCGCAGTGCTCGAGGCTGTG...AGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTCGCTCCGGACCGGGCTaGGCGTCACTGTTGCAGACT +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPRSGPG*ASLLQT
Trigger: AGTCTGCAACAGTGACGCGCAGCCCGGTCCGGAGCG...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTCGCGAATCACAGCGCTaGTGTCGCCAACAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPRESQR*CRQQRR
Trigger: GCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCG...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCACTCAGCAAGGCCAAGTaGCTCGGCCAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: EGVSNNSPATRITALLSPLSKAK*LGQGGG
Trigger: CCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAG...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTTTCCCGAACCACGACTaGCAGGCATCCTTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSFPNHD*QASLLG
Trigger: GCCTAGCAAGGATGCCTGGCAGTCGTGGTTCGGGAA...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR CCA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTATGGCGGTGGTGAAGTaGTGGAAGAGTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KSTAVCARTERQSPWASCMAVVK*WKSGLL
Trigger: CAGCAAGCCACTCTTCCACCACTTCACCACCGCCAT...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGTCTGACCGACAGCCGTaGGGGCTGCTCAACGACGAC +
Preference number: 4 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKSDRQP*GLLNDD
Trigger: GTCGTCGTTGAGCAGCCCCCACGGCTGTCGGTCAGA...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCGCTCCCTTTGGGAGGTaGCCTTCAGACACTGCGGCT +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGAPFGR*PSDTAA
Trigger: AGCCGCAGTGTCTGAAGGCCACCTCCCAAAGGGAGC...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCCCTTGTGTGCTACTGTaGTCGCCAACAGCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGPCVLL*SPTAPP
Trigger: CGGCGGGGCTGTTGGCGACCACAGTAGCACACAAGG...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR TCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGTGTCGATGGCGGTGGTaGAGTGGTGGAAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGCRWRW*SGGRVA
Trigger: AGCCACTCTTCCACCACTTCACCACCGCCATCGACA...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTACACACCCAAGAGTCTaGCCGACAGCCGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPTHPRV*PTAVGA
Trigger: AGCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGT...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp ACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTGCTGCCAACTGTGTGTaGGCAGATGACTTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TAVCARTERQSPWASCLTAANCV*ADDLQE
Trigger: TTCCTGCAAGTCATCTGCTCACACACAGTTGGCAGC...AGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCAGACACAGCGAAAGCTaGCCCAGAAGGCAAACAAAG +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVRHSES*PRRQTK
Trigger: CTTTGTTTGCCTTCTGGGTCAGCTTTCGCTGTGTCT...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGGGTGGAAGAGTGGCTTaGTGCGGTTCCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWGGRVA*CGSVSS
Trigger: GGAAGAGACGGAACCGCAGCAAGCCACTCTTCCACC...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCGAGCACCGCTGTGTGTaGACGGACGGAGCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLAEHRCV*TDGAAV
Trigger: GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTC...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCGATGGGAGAGCCGTCTaGAAGGGGACCTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGDGRAV*KGTWFL
Trigger: CAGAAACCAGGTCCCCTTGCAGACGGCTCTCCCATC...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCGGAAACGCTATGTGCTaGCAACTGTGTGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVGNAMC*QLCVSR
Trigger: TCTGCTCACACACAGTTGGCAGCACATAGCGTTTCC...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCGAAGGAAACGCTATGTaGTGCCAACTGTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLEGNAM*CQLCVS
Trigger: GCTCACACACAGTTGGCAGCACATAGCGTTTCCTTC...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCAAGCCAAGGGTGAGCTaGAGAGGGGCTCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLAKPRVS*RGARGS
Trigger: CGAGCCCCGAGCCCCTCTGCAGCTCACCCTTGGCTT...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCTGCGTTTACCGGGTTTaGGGAAAACAAGCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLCVYRV*GKQAKG
Trigger: ACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCA...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTGCTGCGCGTCACTGTTaGAGACTGCAAATGGGACCT +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSAARHC*RLQMGP
Trigger: AGGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGC...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCGGGGGCCATCCCCCTaGGCTTTCTATCGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSRGPSP*AFYRVK
Trigger: TTTAACTCGATAGAAAGCGCAGGGGGATGGCCCCCG...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAGGATGTTGTCGAAGATaGTGTCGCGGAACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASGCCRR*CRGTPA
Trigger: TGCTGGAGTTCCGCGACACCATCTTCGACAACATCC...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGTCCTCCATGAGGACCTaGTCGTACTCGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGSSMRT*SYSLEE
Trigger: CTCCTCCAGCGAGTACGACCAGGTCCTCATGGAGGA...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGTCTGACCGACAGCCGTaGGGGCTGCTCAACGACGAC +
Preference number: 4 (lower is better)
Translates to: VSNNSPATRITALLSPTASDRQP*GLLNDD
Trigger: GTCGTCGTTGAGCAGCCCCCACGGCTGTCGGTCAGA...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGTTGCCTAGAGCTCGCTaGCTGGCTGGTCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGLPRAR*LAGLTA
Trigger: TGCTGTCAGACCAGCCAGCCAGCGAGCTCTAGGCAA...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCAGCATCGGCGTGCACTaGATCTCTACAAGCTACTGT +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLSIGVH*ISTSYC
Trigger: ACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCT...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCGCAACGTGCTCCCTTTaGGAGGTGGCCTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGATCSL*EVAFRH
Trigger: GTGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGC...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGGAGCGGCAGTCACCGTaGGCATCCTGTCTCACTCCG +
Preference number: 4 (lower is better)
Translates to: VSNNSPATRITALLSPTAERQSP*ASCLTP
Trigger: CGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTC...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCGGGTTGGGCAGTGGGTaGCTAAGGGGAGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGGLGSG*LRGEEH
Trigger: GTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCC...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCCTGTGTCTTTGCCGTTaGGTTGGGCAGTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGLCLCR*VGQWVA
Trigger: AGCCACCCACTGCCCAACCCAACGGCAAAGACACAG...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCGGTGGAGCGGCAGTTTaGAGAAACTCAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVGGAAV*RNSRFL
Trigger: GAGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACC...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGGCTGTCCAAAGGCACTaGTGGAGCGGCAGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGAVQRH*WSGSLE
Trigger: CTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGC...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCAGAGGCTCTCCCCGTTaGCGGAGGACCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLARGSPR*RRTRLH
Trigger: GTGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCT...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGGCTCTGCACTCGGCATaGCTGACAAGGACGTCACTG +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGALHSA*LTRTSL
Trigger: CAGTGACGTCCTTGTCAGCCATGCCGAGTGCAGAGC...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407904.7
3UTR CAA 72 bp GGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTaGGAGAAACTCAAGATTCCTCCAGCGTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GTAVQRHWWSGS*EKLKIPPASVG
Trigger: GCCCACAGACGCTGGAGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCATCAACAAGAACCCTTaGGCCCTTGAGGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLINKNP*ALEDVV
Trigger: GACAACATCCTCAAGGGCTCAAGGGTTCTTGTTGAT...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR TCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCATGTGCGGGTCGCCCCTaGAGTCCGGGAAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EGVSNNSPATRITALLSPCAGRP*SPGSAS
Trigger: AGAAGCACTTCCCGGACTTCAGGGGCGACCCGCACA...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCATCGGCACGGGAGTTTaGAAAGGCAACGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGIGTGV*KGNVLP
Trigger: AGGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGAT...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACACAGGGTGGGAAGGGCTaGGCCTGCTGTAGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: STARESSMLSPDENAVLTQGGKG*ACCRGV
Trigger: TACGCCCCTACAGCAGGCTCAGCCCTTCCCACCCTG...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGGAAGAGGAATGTTTCTaGAAGAAGGAAACGCTATGT +
Preference number: 4 (lower is better)
Translates to: QLSKAKCLGQGGGVSAEREEECF*KKETLC
Trigger: ACATAGCGTTTCCTTCTTTCAGAAACATTCCTCTTC...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGCCTGGGATATGTGACTaGGCCACAGCAACATTCGGG +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGPGICD*ATATFG
Trigger: CCCGAATGTTGCTGTGGCTCAGTCACATATCCCAGG...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTGCTGTGCTAACAGGGTaGCCCAGAGGCAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPAVLTG*PRGRFP
Trigger: GGGAAACCTGCCTCTGGGTCACCCTGTTAGCACAGC...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGACTGCAAATGGGACCTaGGACCACCCCGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQTANGT*DHPEGP
Trigger: GGGGCCCTCGGGGTGGTCTCAGGTCCCATTTGCAGT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCGGAAGAGTGGCTTGCTaGGGTTCCGTCTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGGRVAC*GSVSSC
Trigger: ACAGGAAGAGACGGAACCGCAGCAAGCCACTCTTCC...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAGTTTCCATGTCCTTTTaGCTAGAGCTCGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRVSMSF*LELAGW
Trigger: CCAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAAC...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCGTTAGAAAAGCCGTCTaGAAGGCCAGCTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVVRKAV*KASWFL
Trigger: CAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAAC...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCATTAGCAGCATCGGCGTaGACTGGATCTCTACAAGCT +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASLAASA*TGSLQA
Trigger: AGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAA...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTACACCTGCAGAGCTCTaGAGCCCGTCCTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPTPAEL*SPSSEL
Trigger: CAGCTCTGAGGACGGGCTGCAGAGCTCTGCAGGTGT...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ATTCCAGGGCACGGATCCGAGAAACCCACTCAAGGACCACACAGACAACACACAGAGCACCGCTGTGTGTaGACGGACGGAGCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: IPGHGSEKPTQGPHRQHTEHRCV*TDGAAV
Trigger: GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTC...TGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCTCGGATCCGTGCCCTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAGGAAACGCTATGTGCTaGCAACTGTGTGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASGNAMC*QLCVSR
Trigger: TCTGCTCACACACAGTTGGCAGCACATAGCGTTTCC...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTGAAAGAGCCCTTGTGTaGTACTGTGGTCGCCAACAG +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSERALV*YCGRQQ
Trigger: CTGTTGGCGACCACAGTAGCACACAAGGGCTCTTTC...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACACCCTCCCGCAGGAAGTaGACCAGGCCCGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITPSRRK*TRPVLS
Trigger: GGAAAGGACGGGCCTGGTGCACTTCCTGCGGGAGGG...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCACTGGAACCACTTCTaGCGCTGGGACCGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQHWNHF*RWDRWP
Trigger: CGGCCAGCGGTCCCAGCGCCAGAAGTGGTTCCAGTG...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCATCCCGTCGAAGCACTaGAACCACTTCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSIPSKH*NHFWRW
Trigger: CCAGCGCCAGAAGTGGTTCCAGTGCTTCGACGGGAT...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGAGCTCGCTGGCTGGCTaGTCTGACAGCATTCCTGAG +
Preference number: 4 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKSSLAG*SDSIPE
Trigger: CTCAGGAATGCTGTCAGACCAGCCAGCCAGCGAGCT...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTAGCATCGGCGTGCACTaGATCTCTACAAGCTACTGT +
Preference number: 4 (lower is better)
Translates to: VCARTERQSPWASCLTPCSIGVH*ISTSYC
Trigger: ACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCT...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCGCAACGTGCTCCCTTTaGGAGGTGGCCTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSATCSL*EVAFRH
Trigger: GTGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGC...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTGTCTGCAAGGGGACCTaGTTTCTGTGTCTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSVCKGT*FLCLCR
Trigger: ACGGCAAAGACACAGAAACCAGGTCCCCTTGCAGAC...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGTTCCTCCAGCGTCTGTaGGCTTCCCGAAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKFLQRL*ASRKVS
Trigger: GCTGACCTTTCGGGAAGCCCACAGACGCTGGAGGAA...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTGTCCAAAGGCACTGGTaGAGCGGCAGTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSVQRHW*SGSLEK
Trigger: TTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGAC...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGCAGAGGGGACCAGCTTaGAATGCAATGTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERQRGPA*NAMYFK
Trigger: TTTAAAATACATTGCATTCCAAGCTGGTCCCCTCTG...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAAGAGGCTCTCCCCGTTaGCGGAGGACCCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITRGSPR*RRTRLH
Trigger: GTGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCT...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCTGCTCGTGGAGCCATTaGTGCTGCGGCGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLACSWSH*CCGGEK
Trigger: CTTCTCCCCGCCGCAGCACCAATGGCTCCACGAGCA...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR TCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGGAACCCTTGAGCCCTTaGGGATGTTGTCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGEPLSP*GCCRRW
Trigger: CCATCTTCGACAACATCCTCAAGGGCTCAAGGGTTC...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR TCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCAGAAGAGCTTGTTGTTaGCGATGGTCTCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVRRACC*RWSRRC
Trigger: ACATCTTCGAGACCATCGTCAACAACAAGCTCTTCT...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCCCGGGAAGTGCTTCTTaGTGCTCACGGTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGPGSAS*CSRSSP
Trigger: AGGTGAAGACCGTGAGCATCAAGAAGCACTTCCCGG...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGACACACCCAAGAGTCTaGCCGACAGCCGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQTHPRV*PTAVGA
Trigger: AGCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGAGCGAGGGGCCTCGATaGGAATCAGACTTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKSEGPR*ESDLGR
Trigger: TCTCCCTAAGTCTGATTCTCATCGAGGCCCCTCGCT...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTAAAACAAGCACTCATTaGCAAGGCCGGACTACTCAG +
Preference number: 4 (lower is better)
Translates to: KSTAVCARTERQSPWASCKTSTH*QGRTTQ
Trigger: CTGAGTAGTCCGGCCTTGTCAATGAGTGCTTGTTTT...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCAATTCACCCCGGTCATaGGGAGGAGGAGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGNSPRS*GGGGGS
Trigger: ACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAATT...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAACCACAAGCAGCCTCTaGAGTCATCTTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRTTSSL*SHLPLS
Trigger: AGAGAGAGGAAGATGACTTCAGAGGCTGCTTGTGGT...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR GCA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTGAGCACCGCTGTGTGTaGACGGACGGAGCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: QALSLAASACTGSLQATVEHRCV*TDGAAV
Trigger: GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTC...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGTGGTTTCTGTGTCTTTaGCGTTGGGTTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWWFLCL*RWVGQW
Trigger: CCACTGCCCAACCCAACGGCAAAGACACAGAAACCA...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTTGCGTTTACCGGGTTTaGGGAAAACAAGCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSCVYRV*GKQAKG
Trigger: ACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCA...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCCGAGAGAGAGTTCCATaGTGTCTCCCGATGAGAACG +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGRERVP*CLPMRT
Trigger: CGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCG...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTTTCAAACAACTCCCCTaGTACGCGAATCACAGCGCT +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSFKQLP*YANHSA
Trigger: AGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAA...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCTGTGCAATGAGTAGGTaGTCAAAACGGCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: PCYANHSAAVANSAAKRLCAMSR*SKRQHF
Trigger: AAAGTGCTGCCGTTTTGAGCACCTACTCATTGCACA...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR CCA 90 bp CAAAGCTTACACCATGAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCCGTACAGCTGGAAGGTaGCCGGCTCCACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QSLHHEQLTRTTTIPMGARTAGR*PAPQAA
Trigger: GGCTGCCTGTGGAGCCGGCCACCTTCCAGCTGTACG...GGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTCACTGGAACCACTTCTaGCGCTGGGACCGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: QALSLAASACTGSLQATVHWNHF*RWDRWP
Trigger: CGGCCAGCGGTCCCAGCGCCAGAAGTGGTTCCAGTG...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp ATTCCAGGGCACGGATCCGAGAAACCCACTCAAGGACCACACAGACAACACACAGCCCGTCCTCAGAGCTaGGAAGGGATCCTAGGCACG +
Preference number: 4 (lower is better)
Translates to: IPGHGSEKPTQGPHRQHTARPQS*EGILGT
Trigger: CGTGCCTAGGATCCCTTCCCAGCTCTGAGGACGGGC...TGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCTCGGATCCGTGCCCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCTTCTCCTTTAAAACGTaGTCATCGGCACTCATCTCC +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVFSFKT*SSALIS
Trigger: GGAGATGAGTGCCGATGACCACGTTTTAAAGGAGAA...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTACTTCCTCTGGGCTCTaGATTCTAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: VCARTERQSPWASCLTPCTSSGL*ILTHTG
Trigger: TCCTGTGTGTGTTAGAATCCAGAGCCCAGAGGAAGT...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCTGTCGATGGCGGTGGTaGAGTGGTGGAAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLACRWRW*SGGRVA
Trigger: AGCCACTCTTCCACCACTTCACCACCGCCATCGACA...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTCGCTCACTGCAGCATaGTGTCCTTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSSLTAA*CPSGSP
Trigger: AGGAGAACCTGAAGGACATCATGCTGCAGTGAGCGA...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAGCAAAGCAAGCTGTGTaGTTAGGTGTTCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASAKQAV*LGVPYS
Trigger: TGAATACGGAACACCTAATCACACAGCTTGCTTTGC...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTTGTAGGGGCGTAAGGTaGATCCACACCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPCRGVR*IHTCRA
Trigger: AGCTCTGCAGGTGTGGATTCACCTTACGCCCCTACA...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCGCTGCCAACTGTGTGTaGGCAGATGACTTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSAANCV*ADDLQE
Trigger: TTCCTGCAAGTCATCTGCTCACACACAGTTGGCAGC...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGGATTTCTCAGTAGAGTaGTACACAGAGGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWDFSVE*YTEGTS
Trigger: GCTGGTCCCCTCTGTGTATCACTCTACTGAGAAATC...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTGGGCCCTGGGATATGTaGCTGAGCCACAGCAACATT +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPGPWDM*LSHSNI
Trigger: AATGTTGCTGTGGCTCAGTCACATATCCCAGGGCCC...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGGGGCCCTGGGATATGTaGCTGAGCCACAGCAACATT +
Preference number: 4 (lower is better)
Translates to: VSNNSPATRITALLSPTAGPWDM*LSHSNI
Trigger: AATGTTGCTGTGGCTCAGTCACATATCCCAGGGCCC...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCTTCTGGAGACAAAACTaGCTAGAGTCTATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVFWRQN*LESMCS
Trigger: GCTACACATAGACTCTAGTCAGTTTTGTCTCCAGAA...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCCATTTTTGCAATAATTaGGGCACAACTACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVHFCNN*GTTTSC
Trigger: GCAGGAGGTAGTTGTGCCTCAATTATTGCAAAAATG...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAAAGACCCCAATGCCATaGAGCACAGAGCGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: EGVSNNSPATRITALLSPKTPMP*STERQD
Trigger: GTCCTGCCGCTCTGTGCTTCATGGCATTGGGGTCTT...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR GCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACAAGAATCCCTCCAGAGTaGGCTCAGGGCCGGGACGTA +
Preference number: 4 (lower is better)
Translates to: STARESSMLSPDENAVLTRIPPE*AQGRDV
Trigger: TACGTCCCGGCCCTGAGCGCACTCTGGAGGGATTCT...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAAGAATCCCTCCAGAGTaGGCTCAGGGCCGGGACGTA +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITRIPPE*AQGRDV
Trigger: TACGTCCCGGCCCTGAGCGCACTCTGGAGGGATTCT...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR GCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTGTTAGAAAAGCCGTCTaGAAGGCCAGCTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSVRKAV*KASWFL
Trigger: CAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAAC...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGTTTGAAAAGGCAACGTaGTCCCTTTGGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKFEKAT*SLWEVA
Trigger: GGCCACCTCCCAAAGGGAGCACGTTGCCTTTTCAAA...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGGGAAACGCTATGTGCTaGCAACTGTGTGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGGNAMC*QLCVSR
Trigger: TCTGCTCACACACAGTTGGCAGCACATAGCGTTTCC...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTACAGCAACATTCGGGTaGCAATTAAGAGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: TAVCARTERQSPWASCLTTATFG*QLRGRF
Trigger: AAAGCGTCCTCTTAATTGGCACCCGAATGTTGCTGT...AGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCTGCGTTTACCGGGTTTaGGGAAAACAAGCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGCVYRV*GKQAKG
Trigger: ACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCA...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTCTCGAAGATGTTCATaGACTCCACCAGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSSRRCS*TPPAGW
Trigger: CCAACCGGCTGGTGGAGTCCATGAACATCTTCGAGA...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp ATTCCAGGGCACGGATCCGAGAAACCCACTCAAGGACCACACAGACAACACACAGGGTTGGGCAGTGGGTaGCTAAGGGGAGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: IPGHGSEKPTQGPHRQHTGLGSG*LRGEEH
Trigger: GTGCTCTTCTCCCCTTAGCCACCCACTGCCCAACCC...TGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCTCGGATCCGTGCCCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCGTCTGCAAGGGGACCTaGTTTCTGTGTCTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSVCKGT*FLCLCR
Trigger: ACGGCAAAGACACAGAAACCAGGTCCCCTTGCAGAC...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCTTCCTCCAGCGTCTGTaGGCTTCCCGAAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLAFLQRL*ASRKVS
Trigger: GCTGACCTTTCGGGAAGCCCACAGACGCTGGAGGAA...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGCGCTTGCACTTCCTCTaGGCTCTGGATTCTAACACA +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGRLHFL*ALDSNT
Trigger: TGTGTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCG...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTAATACAAAAAGCAAGTaGACAGGAACATCGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VCARTERQSPWASCLTPCNTKSK*TGTSAR
Trigger: CCTCGCCGATGTTCCTGTCCACTTGCTTTTTGTATT...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR CCA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGTTGCTAGGCACGGCCTaGGAAACATTCTCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWLLGTA*ETFSVS
Trigger: TGAAACGGAGAATGTTTCCCAGGCCGTGCCTAGCAA...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR TCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTTCGCTCACTGCAGCATaGTGTCCTTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPSLTAA*CPSGSP
Trigger: AGGAGAACCTGAAGGACATCATGCTGCAGTGAGCGA...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTACGTCCTCCAGCCTGTaGGGGTCGCCCCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCTSSSL*GSPLKS
Trigger: GGACTTCAGGGGCGACCCGCACAGGCTGGAGGACGT...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTGGTCCTCAATTAAACTaGGTCAGAAAAAGAGGAACG +
Preference number: 4 (lower is better)
Translates to: KSTAVCARTERQSPWASCGPQLN*VRKRGT
Trigger: CGTTCCTCTTTTTCTGACGCAGTTTAATTGAGGACC...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAGGTCCTCAATTAAACTaGGTCAGAAAAAGAGGAACG +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASGPQLN*VRKRGT
Trigger: CGTTCCTCTTTTTCTGACGCAGTTTAATTGAGGACC...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTTTTGAAAAGGCAACGTaGTCCCTTTGGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPFEKAT*SLWEVA
Trigger: GGCCACCTCCCAAAGGGAGCACGTTGCCTTTTCAAA...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTTGGTTTCTGTGTCTTTaGCGTTGGGTTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPWFLCL*RWVGQW
Trigger: CCACTGCCCAACCCAACGGCAAAGACACAGAAACCA...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTGAGTGTTTACTCTTCTaGAAGCACAGTCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: VCARTERQSPWASCLTPCECLLF*KHSHRS
Trigger: GCTTCTATGACTGTGCTTGCAGAAGAGTAAACACTC...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCGAGAGAGAGTTCCATaGTGTCTCCCGATGAGAACG +
Preference number: 4 (lower is better)
Translates to: VSNNSPATRITALLSPTARERVP*CLPMRT
Trigger: CGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCG...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCACGGATAAGACCCCAATaGCATGAAGCACAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: EGVSNNSPATRITALLSPRIRPQ*HEAQSG
Trigger: GCCGCTCTGTGCTTCATGGCATTGGGGTCTTATCCG...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CCA 90 bp ATTCCAGGGCACGGATCCGAGAAACCCACTCAAGGACCACACAGACAACACACATCCTCCATGAGGACCTaGTCGTACTCGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: IPGHGSEKPTQGPHRQHTSSMRT*SYSLEE
Trigger: CTCCTCCAGCGAGTACGACCAGGTCCTCATGGAGGA...TGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCTCGGATCCGTGCCCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAGCTCGCTGGCTGGCTaGTCTGACAGCATTCCTGAG +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQSSLAG*SDSIPE
Trigger: CTCAGGAATGCTGTCAGACCAGCCAGCCAGCGAGCT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTGTCTGCAAGGCCAGCTaGTTTTTGTGTTTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LQGRAQALSLAASACTGSVCKAS*FLCFCH
Trigger: ATGACAGAAACACAAAAACCAGCTGGCCTTGCAGAC...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGGTCTGCAAGGGGACCTaGTTTCTGTGTCTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: VSNNSPATRITALLSPTAVCKGT*FLCLCR
Trigger: ACGGCAAAGACACAGAAACCAGGTCCCCTTGCAGAC...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGACTTCCTCTGGGCTCTaGATTCTAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGTSSGL*ILTHTG
Trigger: TCCTGTGTGTGTTAGAATCCAGAGCCCAGAGGAAGT...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACACCTGGGATATGTGACTaGGCCACAGCAACATTCGGG +
Preference number: 4 (lower is better)
Translates to: STARESSMLSPDENAVLTPGICD*ATATFG
Trigger: CCCGAATGTTGCTGTGGCTCAGTCACATATCCCAGG...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCCTGGGATATGTGACTaGGCCACAGCAACATTCGGG +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQPGICD*ATATFG
Trigger: CCCGAATGTTGCTGTGGCTCAGTCACATATCCCAGG...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCATGCTGTCTCCCGATaGGAACGCTGTGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQHAVSR*ERCANR
Trigger: CCTGTTAGCACAGCGTTCTCATCGGGAGACAGCATG...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp ATTCCAGGGCACGGATCCGAGAAACCCACTCAAGGACCACACAGACAACACACACATGCTGTCTCCCGATaGGAACGCTGTGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: IPGHGSEKPTQGPHRQHTHAVSR*ERCANR
Trigger: CCTGTTAGCACAGCGTTCTCATCGGGAGACAGCATG...TGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCTCGGATCCGTGCCCTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAAGCCCAGCAAACACTaGCACACAGCCTCGAGCACT +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQKPSKH*HTASST
Trigger: AGTGCTCGAGGCTGTGTGTCAGTGTTTGCTGGGCTT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAATTCACCCCGGTCATaGGGAGGAGGAGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQNSPRS*GGGGGS
Trigger: ACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAATT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGATTCTGGAGACAAAACTaGCTAGAGTCTATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRFWRQN*LESMCS
Trigger: GCTACACATAGACTCTAGTCAGTTTTGTCTCCAGAA...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp ATTCCAGGGCACGGATCCGAGAAACCCACTCAAGGACCACACAGACAACACACATGCACTCGGCATGGCTaGCAAGGACGTCACTGTATC +
Preference number: 4 (lower is better)
Translates to: IPGHGSEKPTQGPHRQHTCTRHG*QGRHCI
Trigger: GATACAGTGACGTCCTTGTCAGCCATGCCGAGTGCA...TGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCTCGGATCCGTGCCCTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTTTAATAACGAAGTCATaGTCCACAATTCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VCARTERQSPWASCLTPCLITKS*STIPLV
Trigger: CACCAAGGGAATTGTGGAGCATGACTTCGTTATTAA...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCATTAATAACGAAGTCATaGTCCACAATTCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASLITKS*STIPLV
Trigger: CACCAAGGGAATTGTGGAGCATGACTTCGTTATTAA...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCACTGAAGTCCGGGAAGTaGTTCTTGATGCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: EGVSNNSPATRITALLSPLKSGK*FLMLTV
Trigger: GACCGTGAGCATCAAGAAGCACTTCCCGGACTTCAG...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCGTTAGAAAAGCCGTCTaGAAGGCCAGCTGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSVRKAV*KASWFL
Trigger: CAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAAC...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCTGCGCGTCACTGTTaGAGACTGCAAATGGGACCT +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITAARHC*RLQMGP
Trigger: AGGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGC...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACACGGGGGCCATCCCCCTaGGCTTTCTATCGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITRGPSP*AFYRVK
Trigger: TTTAACTCGATAGAAAGCGCAGGGGGATGGCCCCCG...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGGAAGTGGTGGAAGAGTaGCTTGCTGCGGTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQEVVEE*LAAVPS
Trigger: AGACGGAACCGCAGCAAGCCACTCTTCCACCACTTC...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGATGGCGGTGGTGAAGTaGTGGAAGAGTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQMAVVK*WKSGLL
Trigger: CAGCAAGCCACTCTTCCACCACTTCACCACCGCCAT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGGTCTGCAAGGCCAGCTaGTTTTTGTGTTTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWVCKAS*FLCFCH
Trigger: ATGACAGAAACACAAAAACCAGCTGGCCTTGCAGAC...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTAGCATCGGCGTGCACTaGATCTCTACAAGCTACTGT +
Preference number: 4 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPSIGVH*ISTSYC
Trigger: ACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCT...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATGCCCGTCCTCAGAGCTaGGAAGGGATCCTAGGCACG +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENARPQS*EGILGT
Trigger: CGTGCCTAGGATCCCTTCCCAGCTCTGAGGACGGGC...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAAAGCTTACACCATGAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCCTGTGTCTTTGCCGTTaGGTTGGGCAGTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QSLHHEQLTRTTTIPMGALCLCR*VGQWVA
Trigger: AGCCACCCACTGCCCAACCCAACGGCAAAGACACAG...GGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTTTCCTCCAGCGTCTGTaGGCTTCCCGAAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QALSLAASACTGSLQATVFLQRL*ASRKVS
Trigger: GCTGACCTTTCGGGAAGCCCACAGACGCTGGAGGAA...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAAAGCTTACACCATGAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCGCTGTCCAAAGGCACTaGTGGAGCGGCAGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QSLHHEQLTRTTTIPMGAAVQRH*WSGSLE
Trigger: CTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGC...GGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGTTCTCCTTTAAAACGTaGTCATCGGCACTCATCTCC +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGFSFKT*SSALIS
Trigger: GGAGATGAGTGCCGATGACCACGTTTTAAAGGAGAA...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp ATTCCAGGGCACGGATCCGAGAAACCCACTCAAGGACCACACAGACAACACACAGTTGCAGACTGCAAATaGGACCTGAGACCACCCCGA +
Preference number: 4 (lower is better)
Translates to: IPGHGSEKPTQGPHRQHTVADCK*DLRPPR
Trigger: TCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAAC...TGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCTCGGATCCGTGCCCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGTCGCTCACTGCAGCATaGTGTCCTTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQSLTAA*CPSGSP
Trigger: AGGAGAACCTGAAGGACATCATGCTGCAGTGAGCGA...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCGCAAAGCAAGCTGTGTaGTTAGGTGTTCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGAKQAV*LGVPYS
Trigger: TGAATACGGAACACCTAATCACACAGCTTGCTTTGC...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACACTGAAGTCCGGGAAGTaGTTCTTGATGCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITLKSGK*FLMLTV
Trigger: GACCGTGAGCATCAAGAAGCACTTCCCGGACTTCAG...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACATGGTTTCTGTGTCTTTaGCGTTGGGTTGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITWFLCL*RWVGQW
Trigger: CCACTGCCCAACCCAACGGCAAAGACACAGAAACCA...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTGGTTTCCATCTGGTGTaGTTCCCGAACCACGACTGC +
Preference number: 4 (lower is better)
Translates to: QALSLAASACTGSLQATVGFHLV*FPNHDC
Trigger: GCAGTCGTGGTTCGGGAAGCACACCAGATGGAAACC...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR CCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACATCTCGAAGATGTTCATaGACTCCACCAGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITSRRCS*TPPAGW
Trigger: CCAACCGGCTGGTGGAGTCCATGAACATCTTCGAGA...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCGGTGGAGCGGCAGTTTaGAGAAACTCAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLAGGAAV*RNSRFL
Trigger: GAGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACC...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTCACCTGGCAGGTAGCTaGACAAGTGAGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCHLAGS*TSELGP
Trigger: TGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTG...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCCGCTTGCACTTCCTCTaGGCTCTGGATTCTAACACA +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLARLHFL*ALDSNT
Trigger: TGTGTTAGAATCCAGAGCCCAGAGGAAGTGCAAGCG...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCTCAGGGAAGACTTGTaGGTTAGAAAAGCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQLREDL*VRKAVC
Trigger: GCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGAG...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAAAAACAAGCACTCATTaGCAAGGCCGGACTACTCAG +
Preference number: 4 (lower is better)
Translates to: EGVSNNSPATRITALLSPKTSTH*QGRTTQ
Trigger: CTGAGTAGTCCGGCCTTGTCAATGAGTGCTTGTTTT...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTATCAACAAGAACCCTTaGGCCCCTGGACCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCINKNP*APGPRV
Trigger: CACCCTGGGTCCAGGGGCTCAAGGGTTCTTGTTGAT...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR GCA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGATCATTTTCAGAATACTaGCAAGGAATGCCAAGCTTA +
Preference number: 4 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRSFSEY*QGMPSL
Trigger: TAAGCTTGGCATTCCTTGGCAGTATTCTGAAAATGA...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR GCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTGGTGGAAGAGTGGCTTaGTGCGGTTCCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCGGRVA*CGSVSS
Trigger: GGAAGAGACGGAACCGCAGCAAGCCACTCTTCCACC...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCGAGTGTTTACTCTTCTaGAAGCACAGTCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGECLLF*KHSHRS
Trigger: GCTTCTATGACTGTGCTTGCAGAAGAGTAAACACTC...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGTTCAAACAACTCCCCTaGTACGCGAATCACAGCGCT +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQFKQLP*YANHSA
Trigger: AGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAA...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTTCTCGAAGATGTTCATaGACTCCACCAGCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: QALSLAASACTGSLQATVSRRCS*TPPAGW
Trigger: CCAACCGGCTGGTGGAGTCCATGAACATCTTCGAGA...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATTTGCCTAGAGCTCGCTaGCTGGCTGGTCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENLPRAR*LAGLTA
Trigger: TGCTGTCAGACCAGCCAGCCAGCGAGCTCTAGGCAA...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAGCTCGCCAAGCAGCTaGGGCATTAACAAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQSSPSS*GINKSS
Trigger: AGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAAAGCTTACACCATGAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCGTCCAAAGGCACTGGTaGAGCGGCAGTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QSLHHEQLTRTTTIPMGAVQRHW*SGSLEK
Trigger: TTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGAC...GGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTGCTGTCCAAAGGCACTaGTGGAGCGGCAGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCAVQRH*WSGSLE
Trigger: CTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGC...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGCAGAGGGGACCAGCTTaGAATGCAATGTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGQRGPA*NAMYFK
Trigger: TTTAAAATACATTGCATTCCAAGCTGGTCCCCTCTG...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATCATGCTGTCTCCCGATaGGAACGCTGTGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENHAVSR*ERCANR
Trigger: CCTGTTAGCACAGCGTTCTCATCGGGAGACAGCATG...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAAAAACAAGCACTCATTaGCAAGGCCGGACTACTCAG +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITKTSTH*QGRTTQ
Trigger: CTGAGTAGTCCGGCCTTGTCAATGAGTGCTTGTTTT...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGTCATTTTCAGAATACTaGCAAGGAATGCCAAGCTTA +
Preference number: 4 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWSFSEY*QGMPSL
Trigger: TAAGCTTGGCATTCCTTGGCAGTATTCTGAAAATGA...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR GCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTGGAAGAGTGGCTTGCTaGGGTTCCGTCTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCGRVAC*GSVSSC
Trigger: ACAGGAAGAGACGGAACCGCAGCAAGCCACTCTTCC...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATCACAGCCTCGAGCACTaGGAGAGAGAGTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENHSLEH*EREFHA
Trigger: AGCATGGAACTCTCTCTCGCAGTGCTCGAGGCTGTG...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGATCTCCTTCCTCTCATaGTTCTGGTTTGAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: VSNNSPATRITALLSPTAISFLS*FWFESD
Trigger: GTCACTTTCAAACCAGAAGCATGAGAGGAAGGAGAT...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGGGCACAACTACCTCCTaGTTTTCCAACATCTTAATA +
Preference number: 4 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKGTTTS*FSNILI
Trigger: TATTAAGATGTTGGAAAAGCAGGAGGTAGTTGTGCC...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCGGCACAACTACCTCCTaGTTTTCCAACATCTTAATA +
Preference number: 4 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSGTTTS*FSNILI
Trigger: TATTAAGATGTTGGAAAAGCAGGAGGTAGTTGTGCC...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTGGTTCTCCTGCAGGATaGTGTCTTTCACAGCATGGA +
Preference number: 4 (lower is better)
Translates to: QALSLAASACTGSLQATVGSPAG*CLSQHG
Trigger: TCCATGCTGTGAAAGACACCATCCTGCAGGAGAACC...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCAATACTGCCAAGGAATaGCAAGCTTATCTCGTGCAT +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLANTAKE*QAYLVH
Trigger: ATGCACGAGATAAGCTTGGCATTCCTTGGCAGTATT...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR GCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTCTGAAGTCCGGGAAGTaGTTCTTGATGCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCLKSGK*FLMLTV
Trigger: GACCGTGAGCATCAAGAAGCACTTCCCGGACTTCAG...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTACGTCCTCCAGCCTGTaGGGGTCGCCCCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVTSSSL*GSPLKS
Trigger: GGACTTCAGGGGCGACCCGCACAGGCTGGAGGACGT...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATGTTTCCATGTCCTTTTaGCTAGAGCTCGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENVSMSF*LELAGW
Trigger: CCAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAAC...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCGGTCCTCAATTAAACTaGGTCAGAAAAAGAGGAACG +
Preference number: 4 (lower is better)
Translates to: VSSPSSWGINKSSASGLAGPQLN*VRKRGT
Trigger: CGTTCCTCTTTTTCTGACGCAGTTTAATTGAGGACC...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTCGAGAGAGAGTTCCATaGTGTCTCCCGATGAGAACG +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCRERVP*CLPMRT
Trigger: CGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCG...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTCGCGAATCACAGCGCTaGTGTCGCCAACAGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVRESQR*CRQQRR
Trigger: GCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCG...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAACTCAGCAAGGCCAAGTaGCTCGGCCAGGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKLSKAK*LGQGGG
Trigger: CCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAG...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAGCCAGCTCCGAGCCCTaGTCGTGGAGCCATTGGTGC +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTASSEP*SWSHWC
Trigger: GCACCAATGGCTCCACGAGCAGGGCTCGGAGCTGGC...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACAGTCTGCAAGGCCAGCTaGTTTTTGTGTTTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: STARESSMLSPDENAVLTVCKAS*FLCFCH
Trigger: ATGACAGAAACACAAAAACCAGCTGGCCTTGCAGAC...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGGCTTCCAAGCTCACTaGAGAAGGAGCAATACAAAA +
Preference number: 4 (lower is better)
Translates to: GRTTQEGVSNNSPATRITGFQAH*RRSNTK
Trigger: TTTTGTATTGCTCCTTCTCCAGTGAGCTTGGAAGCC...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR TCA 90 bp CAAAGCTTACACCATGAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCAGAAGAGCTTGTTGTTaGCGATGGTCTCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: QSLHHEQLTRTTTIPMGARRACC*RWSRRC
Trigger: ACATCTTCGAGACCATCGTCAACAACAAGCTCTTCT...GGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR TCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATCTCAGGGAAGACTTGTaGGTTAGAAAAGCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENLREDL*VRKAVC
Trigger: GCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGAG...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAGAAGAGGAATGTTTCTaGAAGAAGGAAACGCTATGT +
Preference number: 4 (lower is better)
Translates to: EGVSNNSPATRITALLSPEEECF*KKETLC
Trigger: ACATAGCGTTTCCTTCTTTCAGAAACATTCCTCTTC...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATGATTTCTCAGTAGAGTaGTACACAGAGGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENDFSVE*YTEGTS
Trigger: GCTGGTCCCCTCTGTGTATCACTCTACTGAGAAATC...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACATTCTGGAGACAAAACTaGCTAGAGTCTATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: STARESSMLSPDENAVLTFWRQN*LESMCS
Trigger: GCTACACATAGACTCTAGTCAGTTTTGTCTCCAGAA...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp ATTCCAGGGCACGGATCCGAGAAACCCACTCAAGGACCACACAGACAACACACACATTTTTGCAATAATTaGGGCACAACTACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IPGHGSEKPTQGPHRQHTHFCNN*GTTTSC
Trigger: GCAGGAGGTAGTTGTGCCTCAATTATTGCAAAAATG...TGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCTCGGATCCGTGCCCTGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTCACTCCGTGTTGTGCTaGTGGGCATGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVHSVLC*WAWGRV
Trigger: CACCCTGCCCCATGCCCAGCAGCACAACACGGAGTG...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGATCTCCTTCCTCTCATaGTTCTGGTTTGAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQISFLS*FWFESD
Trigger: GTCACTTTCAAACCAGAAGCATGAGAGGAAGGAGAT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTTGGAGCCATTGGTGCTaGGGCGGGGAGAAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVWSHWC*GGEKRP
Trigger: TGGCCTCTTCTCCCCGCCGCAGCACCAATGGCTCCA...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTGGAAAGAAACCACGCTaGCCGGGTGGAGGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVGKKPR*PGGGAP
Trigger: TGGCGCTCCTCCACCCGGGCAGCGTGGTTTCTTTCC...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAATCCAGCAGCGCCTTCTaGTCGAACTCGCGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKSSSAF*SNSRPW
Trigger: CCACGGCCGCGAGTTCGACCAGAAGGCGCTGCTGGA...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATGGTTCTCCTGCAGGATaGTGTCTTTCACAGCATGGA +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENGSPAG*CLSQHG
Trigger: TCCATGCTGTGAAAGACACCATCCTGCAGGAGAACC...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACATCTGACCGACAGCCGTaGGGGCTGCTCAACGACGAC +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTSDRQP*GLLNDD
Trigger: GTCGTCGTTGAGCAGCCCCCACGGCTGTCGGTCAGA...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAGAGCGGCAGTCACCGTaGGCATCCTGTCTCACTCCG +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTERQSP*ASCLTP
Trigger: CGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTC...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTAGCTCGCCAAGCAGCTaGGGCATTAACAAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCSSPSS*GINKSS
Trigger: AGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCT...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATAGCTCGCCAAGCAGCTaGGGCATTAACAAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENSSPSS*GINKSS
Trigger: AGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCT...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAACACACCCAAGAGTCTaGCCGACAGCCGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKTHPRV*PTAVGA
Trigger: AGCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAAAGGCCTTGCCCGCATaGGGCTTCCAAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTKALPA*GFQAHW
Trigger: CCAGTGAGCTTGGAAGCCTCATGCGGGCAAGGCCTT...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAGACAGCCGTGGGGGCTaGTCAACGACGACAAACCCC +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKDSRGG*STTTNP
Trigger: GGGGTTTGTCGTCGTTGAGCAGCCCCCACGGCTGTC...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAACACCTGCAGAGCTCTaGAGCCCGTCCTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTTPAEL*SPSSEL
Trigger: CAGCTCTGAGGACGGGCTGCAGAGCTCTGCAGGTGT...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAACACTCCGTGTTGTGCTaGTGGGCATGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKHSVLC*WAWGRV
Trigger: CACCCTGCCCCATGCCCAGCAGCACAACACGGAGTG...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp ATATGCGTCTTATGTGTACACAGTATAGCTATGAGGAACAGATCTTATTTTGAGGGCGGAGGACCCGCTTaGACTTCCTCTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ICVLCVHSIAMRNRSYFEGGGPA*TSSGLW
Trigger: CCAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCC...CTCAAAATAAGATCTGTTCCTCATAGCTATACTGTGTACACATAAGACGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp ATATGCGTCTTATGTGTACACAGTATAGCTATGAGGAACAGATCTTATTTTGAGCACTGGAACCACTTCTaGCGCTGGGACCGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ICVLCVHSIAMRNRSYFEHWNHF*RWDRWP
Trigger: CGGCCAGCGGTCCCAGCGCCAGAAGTGGTTCCAGTG...CTCAAAATAAGATCTGTTCCTCATAGCTATACTGTGTACACATAAGACGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATCCACTACCATTCCAATaGGAGCCTCTGCCTTACAAT +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENPLPFQ*EPLPYN
Trigger: ATTGTAAGGCAGAGGCTCCCATTGGAATGGTAGTGG...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR TCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACATGTCGATGGCGGTGGTaGAGTGGTGGAAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTCRWRW*SGGRVA
Trigger: AGCCACTCTTCCACCACTTCACCACCGCCATCGACA...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAACACCTGCAGAGCTCTaGAGCCCGTCCTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKTPAEL*SPSSEL
Trigger: CAGCTCTGAGGACGGGCTGCAGAGCTCTGCAGGTGT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATACAGCAACATTCGGGTaGCAATTAAGAGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENTATFG*QLRGRF
Trigger: AAAGCGTCCTCTTAATTGGCACCCGAATGTTGCTGT...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTATCCCGTCGAAGCACTaGAACCACTTCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVIPSKH*NHFWRW
Trigger: CCAGCGCCAGAAGTGGTTCCAGTGCTTCGACGGGAT...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTTCCTCCATGAGGACCTaGTCGTACTCGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVSSMRT*SYSLEE
Trigger: CTCCTCCAGCGAGTACGACCAGGTCCTCATGGAGGA...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAGCGGTGGTGAAGTGGTaGAAGAGTGGCTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKAVVKW*KSGLLR
Trigger: CCGCAGCAAGCCACTCTTCCACCACTTCACCACCGC...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTCAGAGGGGACCAGCTTaGAATGCAATGTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: QALSLAASACTGSLQATVQRGPA*NAMYFK
Trigger: TTTAAAATACATTGCATTCCAAGCTGGTCCCCTCTG...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACACCGGGAAGTGCTTCTTaGTGCTCACGGTCTTCACCT +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTPGSAS*CSRSSP
Trigger: AGGTGAAGACCGTGAGCATCAAGAAGCACTTCCCGG...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACATGTAGGGGCGTAAGGTaGATCCACACCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTCRGVR*IHTCRA
Trigger: AGCTCTGCAGGTGTGGATTCACCTTACGCCCCTACA...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAAAGCCCAGCAAACACTaGCACACAGCCTCGAGCACT +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTKPSKH*HTASST
Trigger: AGTGCTCGAGGCTGTGTGTCAGTGTTTGCTGGGCTT...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTCATTTTTGCAATAATTaGGGCACAACTACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGKTCELEKPSARPAGFCHFCNN*GTTTSC
Trigger: GCAGGAGGTAGTTGTGCCTCAATTATTGCAAAAATG...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAACCTACCAGCCTTGAGTaGGAGACCACAAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKPTSLE*ETTSSL
Trigger: GAGGCTGCTTGTGGTCTCTCACTCAAGGCTGGTAGG...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR GCA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACAAATGTTAATACACTGTaGAAAGCTTACACCATGAAC +
Preference number: 4 (lower is better)
Translates to: STARESSMLSPDENAVLTNVNTL*KAYTMN
Trigger: GTTCATGGTGTAAGCTTTGCACAGTGTATTAACATT...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR GCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAAGACAGACAAGGCCTTaGCCGCATGAGGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTRQTRP*PHEASK
Trigger: CTTGGAAGCCTCATGCGGGCAAGGCCTTGTCTGTCT...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR GCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATCCGTTTCATTTCAAATaGCTACAATACAGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENPFHFK*LQYSRR
Trigger: GCGCCTACTGTATTGTAGGCATTTGAAATGAAACGG...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTGAAGTGGTGGAAGAGTaGCTTGCTGCGGTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVEVVEE*LAAVPS
Trigger: AGACGGAACCGCAGCAAGCCACTCTTCCACCACTTC...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTATGGCGGTGGTGAAGTaGTGGAAGAGTGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVMAVVK*WKSGLL
Trigger: CAGCAAGCCACTCTTCCACCACTTCACCACCGCCAT...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAGCTGCCAACTGTGTGTaGGCAGATGACTTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTAANCV*ADDLQE
Trigger: TTCCTGCAAGTCATCTGCTCACACACAGTTGGCAGC...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAACCCAGGGTGTGCAATaGGTAGGTGCTCAAAACGGC +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKTQGVQ*VGAQNG
Trigger: GCCGTTTTGAGCACCTACTCATTGCACACCCTGGGT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR GCA 90 bp ATATGCGTCTTATGTGTACACAGTATAGCTATGAGGAACAGATCTTATTTTGAGGGTGGAAGAGTGGCTTaGTGCGGTTCCGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ICVLCVHSIAMRNRSYFEGGRVA*CGSVSS
Trigger: GGAAGAGACGGAACCGCAGCAAGCCACTCTTCCACC...CTCAAAATAAGATCTGTTCCTCATAGCTATACTGTGTACACATAAGACGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR GCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAGTTTCCATGTCCTTTTaGCTAGAGCTCGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTVSMSF*LELAGW
Trigger: CCAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAAC...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAACACAGCCTCGAGCACTaGGAGAGAGAGTTCCATGCT +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKHSLEH*EREFHA
Trigger: AGCATGGAACTCTCTCTCGCAGTGCTCGAGGCTGTG...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAACGGGGGCCATCCCCCTaGGCTTTCTATCGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKRGPSP*AFYRVK
Trigger: TTTAACTCGATAGAAAGCGCAGGGGGATGGCCCCCG...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATGGCACAACTACCTCCTaGTTTTCCAACATCTTAATA +
Preference number: 4 (lower is better)
Translates to: SVYSSASTVIEARGLDENGTTTS*FSNILI
Trigger: TATTAAGATGTTGGAAAAGCAGGAGGTAGTTGTGCC...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp ATATGCGTCTTATGTGTACACAGTATAGCTATGAGGAACAGATCTTATTTTGAGAGCTCGCTGGCTGGCTaGTCTGACAGCATTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ICVLCVHSIAMRNRSYFESSLAG*SDSIPE
Trigger: CTCAGGAATGCTGTCAGACCAGCCAGCCAGCGAGCT...CTCAAAATAAGATCTGTTCCTCATAGCTATACTGTGTACACATAAGACGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAGTTGCAGACTGCAAATaGGACCTGAGACCACCCCGA +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKVADCK*DLRPPR
Trigger: TCGGGGTGGTCTCAGGTCCCATTTGCAGTCTGCAAC...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACATACACCATGAACAACTaGCCCGGACCACTACCATTC +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTYTMNN*PGPLPF
Trigger: GAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTA...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTGGTTCTCCTGCAGGATaGTGTCTTTCACAGCATGGA +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVGSPAG*CLSQHG
Trigger: TCCATGCTGTGAAAGACACCATCCTGCAGGAGAACC...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAGTCCAAAGGCACTGGTaGAGCGGCAGTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKVQRHW*SGSLEK
Trigger: TTTCTCCAAACTGCCGCTCCACCAGTGCCTTTGGAC...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAAGACACAGCGAAAGCTaGCCCAGAAGGCAAACAAAG +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKRHSES*PRRQTK
Trigger: CTTTGTTTGCCTTCTGGGTCAGCTTTCGCTGTGTCT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp ATATGCGTCTTATGTGTACACAGTATAGCTATGAGGAACAGATCTTATTTTGAGGCAAAGCTTACACCATaGACAACTGACCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: ICVLCVHSIAMRNRSYFEAKLTP*TTDPDH
Trigger: GTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTGC...CTCAAAATAAGATCTGTTCCTCATAGCTATACTGTGTACACATAAGACGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAGAAGGAAACGCTATGTaGTGCCAACTGTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKEGNAM*CQLCVS
Trigger: GCTCACACACAGTTGGCAGCACATAGCGTTTCCTTC...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAATTCAAACAACTCCCCTaGTACGCGAATCACAGCGCT +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKFKQLP*YANHSA
Trigger: AGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAA...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAACTTCCTCTGGGCTCTaGATTCTAACACACACAGGA +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTTSSGL*ILTHTG
Trigger: TCCTGTGTGTGTTAGAATCCAGAGCCCAGAGGAAGT...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAAGAAGAGCTTGTTGTTaGCGATGGTCTCGAAGATGT +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTRRACC*RWSRRC
Trigger: ACATCTTCGAGACCATCGTCAACAACAAGCTCTTCT...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTGCAAAGCAAGCTGTGTaGTTAGGTGTTCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVAKQAV*LGVPYS
Trigger: TGAATACGGAACACCTAATCACACAGCTTGCTTTGC...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR TCA 90 bp ATATGCGTCTTATGTGTACACAGTATAGCTATGAGGAACAGATCTTATTTTGAGAGACACAGCGAAAGCTaGCCCAGAAGGCAAACAAAG +
Preference number: 4 (lower is better)
Translates to: ICVLCVHSIAMRNRSYFERHSES*PRRQTK
Trigger: CTTTGTTTGCCTTCTGGGTCAGCTTTCGCTGTGTCT...CTCAAAATAAGATCTGTTCCTCATAGCTATACTGTGTACACATAAGACGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR TCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAAGAGCGGCAGGACGATaGGAGGATAAATCATTTGGA +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKRAAGR*EDKSFG
Trigger: TCCAAATGATTTATCCTCTCATCGTCCTGCCGCTCT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR GCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAGAGTGTTTACTCTTCTaGAAGCACAGTCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTECLLF*KHSHRS
Trigger: GCTTCTATGACTGTGCTTGCAGAAGAGTAAACACTC...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAACAGCAACATTCGGGTaGCAATTAAGAGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKTATFG*QLRGRF
Trigger: AAAGCGTCCTCTTAATTGGCACCCGAATGTTGCTGT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTATCTCCTTCCTCTCATaGTTCTGGTTTGAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVISFLS*FWFESD
Trigger: GTCACTTTCAAACCAGAAGCATGAGAGGAAGGAGAT...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
3UTR CAA 72 bp GACCCCACAATATCTCCTTCCTCTCATGCTTCTGGTTaGAAAGTGACGAGTAAATATGTCAGACTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: DPTISPSSHASG*KVTSKYVRLFK
Trigger: TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGAAGGAGATATTGTGGGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAAATACTGCCAAGGAATaGCAAGCTTATCTCGTGCAT +
Preference number: 4 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKNTAKE*QAYLVH
Trigger: ATGCACGAGATAAGCTTGGCATTCCTTGGCAGTATT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR GCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACATTAATAACGAAGTCATaGTCCACAATTCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTLITKS*STIPLV
Trigger: CACCAAGGGAATTGTGGAGCATGACTTCGTTATTAA...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR GCA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAATCAGGAACATCCCATaGTTCTCATTTTCAGAATAC +
Preference number: 4 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTIRNIP*FSFSEY
Trigger: GTATTCTGAAAATGAGAAGCATGGGATGTTCCTGAT...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS CCA 90 bp AGCGCGGCTCCGAAGCAGGAGAGGGCCAGCTCCGAGCCCTGCTCGTaGAGCCATTGGTGCTGCGGCGGGGAGAAGAGGCCACAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SAAPKQERASSEPCS*SHWCCGGEKRPQAG
Trigger: CCCCGCCTGTGGCCTCTTCTCCCCGCCGCAGCACCAATGGCTCCACGAGCAGGGCTCGGAGCTGGCCCTCTCCTGCTTCGGAGCCGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 90 bp CCAGTCAGCGCGGCTCCGAAGCAGGAGAGGGCCAGCTCCGAGCCCTaGTCGTGGAGCCATTGGTGCTGCGGCGGGGAGAAGAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: PVSAAPKQERASSEP*SWSHWCCGGEKRPQ
Trigger: CTGTGGCCTCTTCTCCCCGCCGCAGCACCAATGGCTCCACGAGCAGGGCTCGGAGCTGGCCCTCTCCTGCTTCGGAGCCGCGCTGACTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS CCA 90 bp GAGCCCTTGTGTGCTACTGTGGTCGCCAACAGCCCCGCCGGCCACTaGCCCAGGACTCAGCGTGCCGTTCCTCCAGGACGCAGACCGGGG +
Preference number: 5 (lower is better)
Translates to: EPLCATVVANSPAGH*PRTQRAVPPGRRPG
Trigger: CCCCGGTCTGCGTCCTGGAGGAACGGCACGCTGAGTCCTGGGCCAGTGGCCGGCGGGGCTGTTGGCGACCACAGTAGCACACAAGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CAA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGCTGCTCGTGGAGCCATaGGTGCTGCGGCGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERLLVEP*VLRRGE
Trigger: TTCTCCCCGCCGCAGCACCAATGGCTCCACGAGCAG...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 90 bp GGGGCCCGTGCCAGGGTCTCCTGCTCCTCAGAAAGAGCCCTTGTGTaGTACTGTGGTCGCCAACAGCCCCGCCGGCCACTGGCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GARARVSCSSERALV*YCGRQQPRRPLAQD
Trigger: GTCCTGGGCCAGTGGCCGGCGGGGCTGTTGGCGACCACAGTAGCACACAAGGGCTCTTTCTGAGGAGCAGGAGACCCTGGCACGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 90 bp GGGCCGGCGTGCACCCACCACTCACGCCAGGCGCTGCGCGACTGCTaGTGGACACACACGATCCCACCGAATCCAGACACGGTATGGCGG +
Preference number: 5 (lower is better)
Translates to: GPACTHHSRQALRDC*WTHTIPPNPDTVWR
Trigger: CCGCCATACCGTGTCTGGATTCGGTGGGATCGTGTGTGTCCAGCAGCAGTCGCGCAGCGCCTGGCGTGAGTGGTGGGTGCACGCCGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS GCA 90 bp GCGGGGCCGGCGTGCACCCACCACTCACGCCAGGCGCTGCGCGACTaGTGCTGGACACACACGATCCCACCGAATCCAGACACGGTATGG +
Preference number: 5 (lower is better)
Translates to: AGPACTHHSRQALRD*CWTHTIPPNPDTVW
Trigger: CCATACCGTGTCTGGATTCGGTGGGATCGTGTGTGTCCAGCAGCAGTCGCGCAGCGCCTGGCGTGAGTGGTGGGTGCACGCCGGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS GCA 90 bp TGCACATGGCGGGGCCGGCGTGCACCCACCACTCACGCCAGGCGCTaGGCGACTGCTGCTGGACACACACGATCCCACCGAATCCAGACA +
Preference number: 5 (lower is better)
Translates to: CTWRGRRAPTTHARR*ATAAGHTRSHRIQT
Trigger: TGTCTGGATTCGGTGGGATCGTGTGTGTCCAGCAGCAGTCGCGCAGCGCCTGGCGTGAGTGGTGGGTGCACGCCGGCCCCGCCATGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS GCA 90 bp CCTGACTTAGGGTCGTCACAGAAGGTGCACATGGCGGGGCCGGCGTaGACCCACCACTCACGCCAGGCGCTGCGCGACTGCTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: PDLGSSQKVHMAGPA*THHSRQALRDCCWT
Trigger: TGTCCAGCAGCAGTCGCGCAGCGCCTGGCGTGAGTGGTGGGTGCACGCCGGCCCCGCCATGTGCACCTTCTGTGACGACCCTAAGTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS CCA 90 bp CCGGCGTGCACCCACCACTCACGCCAGGCGCTGCGCGACTGCTGCTaGACACACACGATCCCACCGAATCCAGACACGGTATGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: PACTHHSRQALRDCC*THTIPPNPDTVWRF
Trigger: GAACCGCCATACCGTGTCTGGATTCGGTGGGATCGTGTGTGTCCAGCAGCAGTCGCGCAGCGCCTGGCGTGAGTGGTGGGTGCACGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS CCA 90 bp AATCCCTCCAGAGTGCGCTCAGGGCCGGGACGTACAGCTGGAAGGTaGCCGGCTCCACAGGCAGCCCCGCCTTGTTCTCGAAGGCCATCA +
Preference number: 5 (lower is better)
Translates to: NPSRVRSGPGRTAGR*PAPQAAPPCSRRPS
Trigger: TGATGGCCTTCGAGAACAAGGCGGGGCTGCCTGTGGAGCCGGCCACCTTCCAGCTGTACGTCCCGGCCCTGAGCGCACTCTGGAGGGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275364.8
ENST00000407904.7
ENST00000447791.1
ENST00000471281.5
CDS CCA 90 bp ATGCCAGAATCCCTCCAGAGTGCGCTCAGGGCCGGGACGTACAGCTaGAAGGTGGCCGGCTCCACAGGCAGCCCCGCCTTGTTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: MPESLQSALRAGTYS*KVAGSTGSPALFSK
Trigger: CTTCGAGAACAAGGCGGGGCTGCCTGTGGAGCCGGCCACCTTCCAGCTGTACGTCCCGGCCCTGAGCGCACTCTGGAGGGATTCTGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407904.7
ENST00000471281.5
CDS-3UTR CAA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCACAGGCAGCCCCGCCTaGTTCTCGAAGGCCATCAGG +
Preference number: 5 (lower is better)
Translates to: PCYANHSAAVANSAAKRLTGSPA*FSKAIR
Trigger: CCTGATGGCCTTCGAGAACAAGGCGGGGCTGCCTGT...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR CAA 90 bp CAGCTCAGCAAGGCCAAGTGCCTCGGCCAGGGCGGTGGGGTCAGCGCTGAGCGGAATCGGCACGGGAGTTaGAAAAGGCAACGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: QLSKAKCLGQGGGVSAERNRHGS*KRQRAP
Trigger: GGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGATT...CCGCTCAGCGCTGACCCCACCGCCCTGGCCGAGGCACTTGGCCTTGCTGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp ACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTAAGAGGCTCTCCCCGTaGGCGGAGGACCCGCTTGCA +
Preference number: 5 (lower is better)
Translates to: TAVCARTERQSPWASCLTKRLSP*AEDPLA
Trigger: TGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCTT...AGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS GCA 90 bp AGCGCCAGAGGGAAGCAGGCCCCATGTCCTCCCTCCCGCAGGAAGTaGACCAGGCCCGTCCTTTCCACCCAGGCTGTACAAAAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: SARGKQAPCPPSRRK*TRPVLSTQAVQKGG
Trigger: TCCTCCCTTTTGTACAGCCTGGGTGGAAAGGACGGGCCTGGTGCACTTCCTGCGGGAGGGAGGACATGGGGCCTGCTTCCCTCTGGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CAA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAGACTGCCAGGCATCCTaGCTAGGCACGGCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASDCQAS*LGTAWE
Trigger: TTCCCAGGCCGTGCCTAGCAAGGATGCCTGGCAGTC...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR CAA 90 bp GTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCTCGGGGGACTCCACCAGCCGGTaGGTGCGCCTGTCCTCCATG +
Preference number: 5 (lower is better)
Translates to: VYRVCGKQAKGELQRGSGDSTSR*VRLSSM
Trigger: CATGGAGGACAGGCGCACCAACCGGCTGGTGGAGTC...CCCCGAGCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp CAAGGACCACACAGACAACACACACCCAAGAGTCTGACCGACAGCCGTGGGGGCGACTCCACCAGCCGGTaGGTGCGCCTGTCCTCCATG +
Preference number: 5 (lower is better)
Translates to: QGPHRQHTPKSLTDSRGGDSTSR*VRLSSM
Trigger: CATGGAGGACAGGCGCACCAACCGGCTGGTGGAGTC...GCCCCCACGGCTGTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTGGCAACGTGCTCCCTTaGGGAGGTGGCCTTCAGACA +
Preference number: 5 (lower is better)
Translates to: VCARTERQSPWASCLTPCGNVLP*GGGLQT
Trigger: TGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGCC...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTGGCAACGTGCTCCCTTaGGGAGGTGGCCTTCAGACA +
Preference number: 5 (lower is better)
Translates to: KSTAVCARTERQSPWASCGNVLP*GGGLQT
Trigger: TGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGCC...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGTGGCGGAGGACCCGCTaGCACTTCCTCTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWWRRTR*HFLWAL
Trigger: CAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCA...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCCATCAACAAGAACCCTaGAGCCCCTGGACCCAGGGT +
Preference number: 5 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVHQQEP*SPWTQG
Trigger: ACCCTGGGTCCAGGGGCTCAAGGGTTCTTGTTGATG...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR CAA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTGAGCCCTTGAGGATGTaGTCGAAGATGGTGTCGCGG +
Preference number: 5 (lower is better)
Translates to: KSTAVCARTERQSPWASCEPLRM*SKMVSR
Trigger: CCGCGACACCATCTTCGACAACATCCTCAAGGGCTC...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CAA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGGACTCCACCAGCCGGTaGGTGCGCCTGTCCTCCATG +
Preference number: 5 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKDSTSR*VRLSSM
Trigger: CATGGAGGACAGGCGCACCAACCGGCTGGTGGAGTC...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCCTGGTTTCTGTGTCTTaGCCGTTGGGTTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVLVSVS*PLGWAV
Trigger: CACTGCCCAACCCAACGGCAAAGACACAGAAACCAG...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGAATCTGCCCCAAGGGCTaGCGTTTACCGGGTTTGCGG +
Preference number: 5 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRICPKG*RLPGLR
Trigger: CCGCAAACCCGGTAAACGCAAGCCCTTGGGGCAGAT...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCCTCAGAAAGAGCCCTaGTGTGCTACTGTGGTCGCC +
Preference number: 5 (lower is better)
Translates to: KSTAVCARTERQSPWASCPQKEP*CATVVA
Trigger: GGCGACCACAGTAGCACACAAGGGCTCTTTCTGAGG...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS TCA 90 bp GCGTGCCGTTCCTCCAGGACGCAGACCGGGGCTCCCTACCAGCCTTaGGTGAGAGACCACAAGCAGCCTCTGAAGTCATCTTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ACRSSRTQTGAPYQP*VRDHKQPLKSSSSL
Trigger: GAGAGAGGAAGATGACTTCAGAGGCTGCTTGTGGTCTCTCACTCAAGGCTGGTAGGGAGCCCCGGTCTGCGTCCTGGAGGAACGGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CAA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCAGTTTCCATGTCCTTTaGCCTAGAGCTCGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVSFHVL*PRARWL
Trigger: CAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAACT...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGGGCTGCGCGTCACTGTaGCAGACTGCAAATGGGACC +
Preference number: 5 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWGCASL*QTANGT
Trigger: GGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGCC...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTTGGCGGAGGACCCGCTaGCACTTCCTCTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPWRRTR*HFLWAL
Trigger: CAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCA...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTTCCGGGAAGTGCTTCTaGATGCTCACGGTCTTCACC +
Preference number: 5 (lower is better)
Translates to: LQGRAQALSLAASACTGSSGKCF*MLTVFT
Trigger: GGTGAAGACCGTGAGCATCAAGAAGCACTTCCCGGA...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp CTGCAGGGCCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTAATCGGCACGGGAGTTaGAAAAGGCAACGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: LQGRAQALSLAASACTGSNRHGS*KRQRAP
Trigger: GGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGATT...AGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGGCCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTCTCACTCCGTGTTTGCGTTTACCGGGTTaGCGGAAAACAAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: VCARTERQSPWASCLTPCLRLPG*RKTSQG
Trigger: CCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAA...ACACGGAGTGAGACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCATCTGCCCCAAGGGCTaGCGTTTACCGGGTTTGCGG +
Preference number: 5 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGICPKG*RLPGLR
Trigger: CCGCAAACCCGGTAAACGCAAGCCCTTGGGGCAGAT...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS CCA 90 bp CGGTCTCAACACAGTTCAGAAAACACATTTGCCTTCCCAGGCCCGTaGGAGGAGTGCTGTGAGGCTGAGACACAGCCCGGCTTGCTGACG +
Preference number: 5 (lower is better)
Translates to: RSQHSSENTFAFPGP*EECCEAETQPGLLT
Trigger: CGTCAGCAAGCCGGGCTGTGTCTCAGCCTCACAGCACTCCTCCCACGGGCCTGGGAAGGCAAATGTGTTTTCTGAACTGTGTTGAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS-3UTR CAA 90 bp GCTGACCCAGAAGGCAAACAAAGCTCACCACGCTCCGGACCGGGCTGCGCGTCAAGAACCCTTGAGCCCTaGAGGATGTTGTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: ADPEGKQSSPRSGPGCASRTLEP*RMLSKM
Trigger: CATCTTCGACAACATCCTCAAGGGCTCAAGGGTTCT...TGACGCGCAGCCCGGTCCGGAGCGTGGTGAGCTTTGTTTGCCTTCTGGGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CAA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTGGTGGAAGAGTGGCTaGCTGCGGTTCCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSWWKSG*LRFRLF
Trigger: GAAGAGACGGAACCGCAGCAAGCCACTCTTCCACCA...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp AAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCACCGTGGGCATCCTGTTGGTGGAGCGGCAGTTaGGAGAAACTCAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: KSTAVCARTERQSPWASCWWSGS*EKLKIP
Trigger: AGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACCA...ACAGGATGCCCACGGTGACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTGGCTGCGCGTCACTGTaGCAGACTGCAAATGGGACC +
Preference number: 5 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPGCASL*QTANGT
Trigger: GGTCCCATTTGCAGTCTGCAACAGTGACGCGCAGCC...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCGGCTCCCTACCAGCCTaGAGTGAGAGACCACAAGCA +
Preference number: 5 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGGSLPA*SERPQA
Trigger: TGCTTGTGGTCTCTCACTCAAGGCTGGTAGGGAGCC...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS-3UTR CAA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGTGCTCCACAATTCCCTaGGTGGCTTTCCTAGCCAGC +
Preference number: 5 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKCSTIP*VAFLAS
Trigger: GCTGGCTAGGAAAGCCACCAAGGGAATTGTGGAGCA...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GGGTGGCTAAGGGGAGAAGAGCACCGCTGTGTGTGCACGGACGGAGCGGCAGTCAAGAAGAGCTTGTTGTaGACGATGGTCTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: GWLRGEEHRCVCTDGAAVKKSLL*TMVSKM
Trigger: CATCTTCGAGACCATCGTCAACAACAAGCTCTTCTT...GACTGCCGCTCCGTCCGTGCACACACAGCGGTGCTCTTCTCCCCTTAGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp ACAGTGAAAGCCACCTGGCAGGTAGCTGGACAAGTGAGCTGGGCCCAGGACTGGTTGCGTTTACCGGGTTaGCGGAAAACAAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: TVKATWQVAGQVSWAQDWLRLPG*RKTSQG
Trigger: CCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAA...CCAGTCCTGGGCCCAGCTCACTTGTCCAGCTACCTGCCAGGTGGCTTTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp CAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCTACTGTTTGGCGGAGGACCCGCTaGCACTTCCTCTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: QALSLAASACTGSLQATVWRRTR*HFLWAL
Trigger: CAGAGCCCAGAGGAAGTGCAAGCGGGTCCTCCGCCA...AACAGTAGCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTCCGATCCGGTCCAAGTaGTCCAGGAAGTACTTCACC +
Preference number: 5 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPPIRSK*SRKYFT
Trigger: GGTGAAGTACTTCCTGGACAACTTGGACCGGATCGG...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGTCCGGGAAGTGCTTCTaGATGCTCACGGTCTTCACC +
Preference number: 5 (lower is better)
Translates to: VSNNSPATRITALLSPTASGKCF*MLTVFT
Trigger: GGTGAAGACCGTGAGCATCAAGAAGCACTTCCCGGA...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCATGGTGGAAGAGTGGCTaGCTGCGGTTCCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: EGVSNNSPATRITALLSPWWKSG*LRFRLF
Trigger: GAAGAGACGGAACCGCAGCAAGCCACTCTTCCACCA...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGGGCAACGTGCTCCCTTaGGGAGGTGGCCTTCAGACA +
Preference number: 5 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQGNVLP*GGGLQT
Trigger: TGTCTGAAGGCCACCTCCCAAAGGGAGCACGTTGCC...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTCTGGTTTCTGTGTCTTaGCCGTTGGGTTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPLVSVS*PLGWAV
Trigger: CACTGCCCAACCCAACGGCAAAGACACAGAAACCAG...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS TCA 90 bp ACACACTATCAGGTGCCCAGCAAGAAGGCCTACTCACTCACCAGCTaGAACTCGCTTCTCCGGCTGAAAGCCTCCCTGATGCCAGAATCC +
Preference number: 5 (lower is better)
Translates to: THYQVPSKKAYSLTS*NSLLRLKASLMPES
Trigger: GGATTCTGGCATCAGGGAGGCTTTCAGCCGGAGAAGCGAGTTTCAGCTGGTGAGTGAGTAGGCCTTCTTGCTGGGCACCTGATAGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471281.5
CDS GCA 90 bp AGAAGGAGCAATACAAAAAGCAAGTGGACAGGAACATCGGCGAGGTaGCTGCGGTCCGGCACTGTGAGTGTGCTCTCAAGGAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RRSNTKSKWTGTSAR*LRSGTVSVLSRRKP
Trigger: TGGCTTCCTCCTTGAGAGCACACTCACAGTGCCGGACCGCAGGCACCTCGCCGATGTTCCTGTCCACTTGCTTTTTGTATTGCTCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS GCA 90 bp TGGCAGGCTCCGAGGACACAACAGAGAACCAGACAGACAAGGCCTTaGCCGCATGAGGCTTCCAAGCTCACTGGAGAAGGAGCAATACAA +
Preference number: 5 (lower is better)
Translates to: WQAPRTQQRTRQTRP*PHEASKLTGEGAIQ
Trigger: TTGTATTGCTCCTTCTCCAGTGAGCTTGGAAGCCTCATGCGGGCAAGGCCTTGTCTGTCTGGTTCTCTGTTGTGTCCTCGGAGCCTGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS GCA 90 bp ACAAGAACCCTTGAGCCCCTGGACCCAGGGTGTGCAATGAGTAGGTaGTCAAAACGGCAGCACTTTCGGTTTCCATCTGGTGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: TRTLEPLDPGCAMSR*SKRQHFRFPSGVLP
Trigger: GGGAAGCACACCAGATGGAAACCGAAAGTGCTGCCGTTTTGAGCACCTACTCATTGCACACCCTGGGTCCAGGGGCTCAAGGGTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS-3UTR CAA 90 bp CCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGCCGCGAAGAGGCTCAGCCAGCAGGATATCTaGCTTACTAGGAAAGTAATT +
Preference number: 5 (lower is better)
Translates to: PCYANHSAAVANSAAKRLSQQDI*LTRKVI
Trigger: AATTACTTTCCTAGTAAGCAAGATATCCTGCTGGCT...GAGCCTCTTCGCGGCGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp AGCGGCGAACAGGCACGGCTGTCCAAAGGCACTGGTGGAGCGGCAGTTTGGAGATTGAAGAAGAGCTTGTaGTTGACGATGGTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SGEQARLSKGTGGAAVWRLKKSL*LTMVSK
Trigger: CTTCGAGACCATCGTCAACAACAAGCTCTTCTTCAA...TCTCCAAACTGCCGCTCCACCAGTGCCTTTGGACAGCCGTGCCTGTTCGCCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS TCA 90 bp CACCGACTCCCCCAGTACACCAGGGGGACACCAAGTCAGAGGATCTaGACTGGCTCACTGCCAATCACCCAGGAGATCAAAGCAATCAAT +
Preference number: 5 (lower is better)
Translates to: HRLPQYTRGTPSQRI*TGSLPITQEIKAIN
Trigger: ATTGATTGCTTTGATCTCCTGGGTGATTGGCAGTGAGCCAGTTCAGATCCTCTGACTTGGTGTCCCCCTGGTGTACTGGGGGAGTCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485329.1
CDS-3UTR CAA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGTGCTCCACAATTCCCTaGGTGGCTTTCCTAGCCAGC +
Preference number: 5 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQCSTIP*VAFLAS
Trigger: GCTGGCTAGGAAAGCCACCAAGGGAATTGTGGAGCA...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp CCGGGCTCAGGCACTGAGTTTAGCAGCATCGGCGTGCACTGGATCTCTACAAGCACGTTGAAGAAGAGCTaGTTGTTGACGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PGSGTEFSSIGVHWISTSTLKKS*LLTMVS
Trigger: CGAGACCATCGTCAACAACAAGCTCTTCTTCAACGT...GCTTGTAGAGATCCAGTGCACGCCGATGCTGCTAAACTCAGTGCCTGAGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS CCA 90 bp ACTCCCCCAGTACACCAGGGGGACACCAAGTCAGAGGATCTGAACTaGCTCACTGCCAATCACCCAGGAGATCAAAGCAATCAATGTCAG +
Preference number: 5 (lower is better)
Translates to: TPPVHQGDTKSEDLN*LTANHPGDQSNQCQ
Trigger: CTGACATTGATTGCTTTGATCTCCTGGGTGATTGGCAGTGAGCCAGTTCAGATCCTCTGACTTGGTGTCCCCCTGGTGTACTGGGGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485329.1
CDS-3UTR CAA 90 bp ATTCACCCCGGTCATGAGGAGGAGGAGGAGGAAGTCCAGCTCAGCAAGGCCAAGTTGAAGAAGAGCTTGTaGTTGACGATGGTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: IHPGHEEEEEEVQLSKAKLKKSL*LTMVSK
Trigger: CTTCGAGACCATCGTCAACAACAAGCTCTTCTTCAA...CTTGGCCTTGCTGAGCTGGACTTCCTCCTCCTCCTCCTCATGACCGGGGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAGTTTCCATGTCCTTTaGCCTAGAGCTCGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQSFHVL*PRARWL
Trigger: CAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAACT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GGCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACATTGCGTTTACCGGGTTaGCGGAAAACAAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: GRTTQEGVSNNSPATRITLRLPG*RKTSQG
Trigger: CCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAA...TGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS TCA 90 bp TCCGAGGACACAACAGAGAACCAGACAGACAAGGCCTTGCCCGCATaGGGCTTCCAAGCTCACTGGAGAAGGAGCAATACAAAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: SEDTTENQTDKALPA*GFQAHWRRSNTKSK
Trigger: CTTGCTTTTTGTATTGCTCCTTCTCCAGTGAGCTTGGAAGCCTCATGCGGGCAAGGCCTTGTCTGTCTGGTTCTCTGTTGTGTCCTCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS-3UTR CAA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCACGTTGAAGAAGAGCTaGTTGTTGACGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: VSSPSSWGINKSSASGLATLKKS*LLTMVS
Trigger: CGAGACCATCGTCAACAACAAGCTCTTCTTCAACGT...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATTGGTGGAAGAGTGGCTaGCTGCGGTTCCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SVYSSASTVIEARGLDENWWKSG*LRFRLF
Trigger: GAAGAGACGGAACCGCAGCAAGCCACTCTTCCACCA...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp CAAAGCTTACACCATGAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCAGTTTCCATGTCCTTTaGCCTAGAGCTCGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QSLHHEQLTRTTTIPMGASFHVL*PRARWL
Trigger: CAGCCAGCGAGCTCTAGGCAAAAGGACATGGAAACT...GGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTCATGGTGTAAGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CAA 90 bp GAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAGAAAACAAGCACTCATaGACAAGGCCGGACTACTCA +
Preference number: 5 (lower is better)
Translates to: EGVSNNSPATRITALLSPENKHS*TRPDYS
Trigger: TGAGTAGTCCGGCCTTGTCAATGAGTGCTTGTTTTC...TGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATTGCTCCACAATTCCCTaGGTGGCTTTCCTAGCCAGC +
Preference number: 5 (lower is better)
Translates to: SVYSSASTVIEARGLDENCSTIP*VAFLAS
Trigger: GCTGGCTAGGAAAGCCACCAAGGGAATTGTGGAGCA...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCAAGAAGAGCTTGTTGTaGACGATGGTCTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: VSSPSSWGINKSSASGLAKKSLL*TMVSKM
Trigger: CATCTTCGAGACCATCGTCAACAACAAGCTCTTCTT...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp ATTCCAGGGCACGGATCCGAGAAACCCACTCAAGGACCACACAGACAACACACAACGTTGAAGAAGAGCTaGTTGTTGACGATGGTCTCG +
Preference number: 5 (lower is better)
Translates to: IPGHGSEKPTQGPHRQHTTLKKS*LLTMVS
Trigger: CGAGACCATCGTCAACAACAAGCTCTTCTTCAACGT...TGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTTTCTCGGATCCGTGCCCTGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTTTCAAACAACTCCCCTGCTACGCGAATCACAGCGCTGCTGTCGCCAACAGCGAATGACAGTTTAGCCTaGCAGAGTTTCCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VSNNSPATRITALLSPTANDSLA*QSFLLL
Trigger: GAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATT...CGCTGTTGGCGACAGCAGCGCTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCGAGAGGATAAATCATTaGGAAAGAAACCACGCTGCC +
Preference number: 5 (lower is better)
Translates to: VSSPSSWGINKSSASGLAERINH*ERNHAA
Trigger: GGCAGCGTGGTTTCTTTCCAAATGATTTATCCTCTC...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 90 bp ACAGGCAGCCCCGCCTTGTTCTCGAAGGCCATCAGGAACATCCCATaGTTCTCATTTTCAGAATACTGCCAAGGAATGCCAAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: TGSPALFSKAIRNIP*FSFSEYCQGMPSLS
Trigger: AGATAAGCTTGGCATTCCTTGGCAGTATTCTGAAAATGAGAAGCATGGGATGTTCCTGATGGCCTTCGAGAACAAGGCGGGGCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275364.8
ENST00000407904.7
ENST00000447791.1
ENST00000471281.5
CDS GCA 90 bp AGTACACCAGGGGGACACCAAGTCAGAGGATCTGAACTGGCTCACTaGCAATCACCCAGGAGATCAAAGCAATCAATGTCAGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: STPGGHQVRGSELAH*QSPRRSKQSMSVVF
Trigger: AAAGACCACTGACATTGATTGCTTTGATCTCCTGGGTGATTGGCAGTGAGCCAGTTCAGATCCTCTGACTTGGTGTCCCCCTGGTGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485329.1
CDS CCA 90 bp TTCATTTCAAATGCCTACAATACAGTAGGCGCTCTGCACTCGGCATaGCTGACAAGGACGTCACTGTATCCAGGTCTAATCTCGCCCCTT +
Preference number: 5 (lower is better)
Translates to: FISNAYNTVGALHSA*LTRTSLYPGLISPL
Trigger: AAGGGGCGAGATTAGACCTGGATACAGTGACGTCCTTGTCAGCCATGCCGAGTGCAGAGCGCCTACTGTATTGTAGGCATTTGAAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS-3UTR CAA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGAAGAAGAGCTTGTTGTaGACGATGGTCTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQKKSLL*TMVSKM
Trigger: CATCTTCGAGACCATCGTCAACAACAAGCTCTTCTT...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GCCGGACTACTCAGGAAGGTGTTTCAAACAACTCCCCTGCTACGCGAATCACAGTTGAAGAAGAGCTTGTaGTTGACGATGGTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: AGLLRKVFQTTPLLRESQLKKSL*LTMVSK
Trigger: CTTCGAGACCATCGTCAACAACAAGCTCTTCTTCAA...CTGTGATTCGCGTAGCAGGGGAGTTGTTTGAAACACCTTCCTGAGTAGTCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAAAGAGGCTCTCCCCGTaGGCGGAGGACCCGCTTGCA +
Preference number: 5 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTKRLSP*AEDPLA
Trigger: TGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCTT...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GCTTGCGTTTACCGGGTTTGCGGAAAACAAGCCAAGGGTGAGCTGCAGAGGGGCAATGTGTTACAGAATTaGGAAGGGGGTGTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: ACVYRVCGKQAKGELQRGNVLQN*EGGVFK
Trigger: TTTAAAGACACCCCCTTCCAAATTCTGTAACACATT...GCCCCTCTGCAGCTCACCCTTGGCTTGTTTTCCGCAAACCCGGTAAACGCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTTAGCTCGCCAAGCAGCTGGGGCATTAACAAAAGCTCTGCTAGTGGCCTTGCCAATGACAGTTTAGCCTaGCAGAGTTTCCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VSSPSSWGINKSSASGLANDSLA*QSFLLL
Trigger: GAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATT...GGCAAGGCCACTAGCAGAGCTTTTGTTAATGCCCCAGCTGCTTGGCGAGCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTACAGGCAGCCCCGCCTaGTTCTCGAAGGCCATCAGG +
Preference number: 5 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVTGSPA*FSKAIR
Trigger: CCTGATGGCCTTCGAGAACAAGGCGGGGCTGCCTGT...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275364.8
ENST00000407904.7
CDS-3UTR CAA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAAAGAGGCTCTCCCCGTaGGCGGAGGACCCGCTTGCA +
Preference number: 5 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKKRLSP*AEDPLA
Trigger: TGCAAGCGGGTCCTCCGCCAACGGGGAGAGCCTCTT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGTGTGAGCAGATGACTTGCAGGAAGATGGGAGAGCCGTCTGCAAGGGGACCTTCTCATGCTTCTGGTTaGAAAGTGACGAGTAAATAT +
Preference number: 5 (lower is better)
Translates to: VCEQMTCRKMGEPSARGPSHASG*KVTSKY
Trigger: ATATTTACTCGTCACTTTCAAACCAGAAGCATGAGA...AGGTCCCCTTGCAGACGGCTCTCCCATCTTCCTGCAAGTCATCTGCTCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTATCTGCCCCAAGGGCTaGCGTTTACCGGGTTTGCGG +
Preference number: 5 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVICPKG*RLPGLR
Trigger: CCGCAAACCCGGTAAACGCAAGCCCTTGGGGCAGAT...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GAACAACTGACCCGGACCACTACCATTCCAATGGGAGCCTCTGCCTTACAATACAGCCAGCAGGATATCTaGCTTACTAGGAAAGTAATT +
Preference number: 5 (lower is better)
Translates to: EQLTRTTTIPMGASALQYSQQDI*LTRKVI
Trigger: AATTACTTTCCTAGTAAGCAAGATATCCTGCTGGCT...GTATTGTAAGGCAGAGGCTCCCATTGGAATGGTAGTGGTCCGGGTCAGTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275364.8
CDS-3UTR CAA 90 bp AGCACTGCGAGAGAGAGTTCCATGCTGTCTCCCGATGAGAACGCTGTGCTAACAAATGTGTTACAGAATTaGGAAGGGGGTGTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: STARESSMLSPDENAVLTNVLQN*EGGVFK
Trigger: TTTAAAGACACCCCCTTCCAAATTCTGTAACACATT...TGTTAGCACAGCGTTCTCATCGGGAGACAGCATGGAACTCTCTCTCGCAGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS TCA 90 bp GTCATCTTCCTCTCTCTTCTCAGAAGCATTTCTCGAATATTCTGCTaGCAAGAGGTTAGCAGGACTTCACAAGACACCCCAACACACACA +
Preference number: 5 (lower is better)
Translates to: VIFLSLLRSISRIFC*QEVSRTSQDTPTHT
Trigger: TGTGTGTGTTGGGGTGTCTTGTGAAGTCCTGCTAACCTCTTGTCAGCAGAATATTCGAGAAATGCTTCTGAGAAGAGAGAGGAAGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491117.5
ENST00000496740.6
CDS-3UTR CAA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTTCCGGGAAGTGCTTCTaGATGCTCACGGTCTTCACC +
Preference number: 5 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVSGKCF*MLTVFT
Trigger: GGTGAAGACCGTGAGCATCAAGAAGCACTTCCCGGA...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACACTGGTTTCTGTGTCTTaGCCGTTGGGTTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTLVSVS*PLGWAV
Trigger: CACTGCCCAACCCAACGGCAAAGACACAGAAACCAG...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAAATCGGCACGGGAGTTaGAAAAGGCAACGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKNRHGS*KRQRAP
Trigger: GGGAGCACGTTGCCTTTTCAAACTCCCGTGCCGATT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp AGTGTTTACTCTTCTGCAAGCACAGTCATAGAAGCGAGGGGCCTCGATGAGAATTCTCATGCTTCTGGTTaGAAAGTGACGAGTAAATAT +
Preference number: 5 (lower is better)
Translates to: SVYSSASTVIEARGLDENSHASG*KVTSKY
Trigger: ATATTTACTCGTCACTTTCAAACCAGAAGCATGAGA...ATTCTCATCGAGGCCCCTCGCTTCTATGACTGTGCTTGCAGAAGAGTAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp TCAGGGAAGACTTGTGAGTTAGAAAAGCCGTCTGCAAGGCCAGCTGGTTTTTGTAATGTGTTACAGAATTaGGAAGGGGGTGTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: SGKTCELEKPSARPAGFCNVLQN*EGGVFK
Trigger: TTTAAAGACACCCCCTTCCAAATTCTGTAACACATT...ACAAAAACCAGCTGGCCTTGCAGACGGCTTTTCTAACTCACAAGTCTTCCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAATGGTGGAGCGGCAGTTaGGAGAAACTCAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKWWSGS*EKLKIP
Trigger: AGGAATCTTGAGTTTCTCCAAACTGCCGCTCCACCA...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTGAAAACAAGCACTCATaGACAAGGCCGGACTACTCA +
Preference number: 5 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVENKHS*TRPDYS
Trigger: TGAGTAGTCCGGCCTTGTCAATGAGTGCTTGTTTTC...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp TTTGTGTTTCTGTCATTAAAGACAGAGCGTGTGTACACACATACACACACAACAGAAAACAAGCACTCATaGACAAGGCCGGACTACTCA +
Preference number: 5 (lower is better)
Translates to: FVFLSLKTERVYTHTHTTENKHS*TRPDYS
Trigger: TGAGTAGTCCGGCCTTGTCAATGAGTGCTTGTTTTC...TGTTGTGTGTGTATGTGTGTACACACGCTCTGTCTTTAATGACAGAAACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp GTGAATGACAGTTTAGCCTTGCAGAGTTTCCTTCTTCTCCAATTACAATGTGTTAATGACAGTTTAGCCTaGCAGAGTTTCCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VNDSLALQSFLLLQLQCVNDSLA*QSFLLL
Trigger: GAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATT...AACACATTGTAATTGGAGAAGAAGGAAACTCTGCAAGGCTAAACTGTCATTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAAAGCCAGCAGGATATCTaGCTTACTAGGAAAGTAATT +
Preference number: 5 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKSQQDI*LTRKVI
Trigger: AATTACTTTCCTAGTAAGCAAGATATCCTGCTGGCT...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS-3UTR CAA 90 bp TCCTCTCATGCTTCTGGTTTGAAAGTGACGAGTAAATATGTCAGACTGTTTAAATCTCATGCTTCTGGTTaGAAAGTGACGAGTAAATAT +
Preference number: 5 (lower is better)
Translates to: SSHASGLKVTSKYVRLFKSHASG*KVTSKY
Trigger: ATATTTACTCGTCACTTTCAAACCAGAAGCATGAGA...TTTAAACAGTCTGACATATTTACTCGTCACTTTCAAACCAGAAGCATGAGAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
CDS GCA 72 bp GCCAGCTCCGAGCCCTGCTCGTGGAGCCATTGGTGCTaGGGCGGGGAGAAGAGGCCACAGGCGGGGACGCCC +
Preference number: 6 (lower is better)
Translates to: ASSEPCSWSHWC*GGEKRPQAGTP
Trigger: GGGCGTCCCCGCCTGTGGCCTCTTCTCCCCGCCGCAGCACCAATGGCTCCACGAGCAGGGCTCGGAGCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 72 bp CAACAGCCCCGCCGGCCACTGGCCCAGGACTCAGCGTaGCGTTCCTCCAGGACGCAGACCGGGGCTCCCTAC +
Preference number: 6 (lower is better)
Translates to: QQPRRPLAQDSA*RSSRTQTGAPY
Trigger: GTAGGGAGCCCCGGTCTGCGTCCTGGAGGAACGGCACGCTGAGTCCTGGGCCAGTGGCCGGCGGGGCTGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 72 bp AGGGCCAGCTCCGAGCCCTGCTCGTGGAGCCATTGGTaGTGCGGCGGGGAGAAGAGGCCACAGGCGGGGACG +
Preference number: 6 (lower is better)
Translates to: RASSEPCSWSHW*CGGEKRPQAGT
Trigger: CGTCCCCGCCTGTGGCCTCTTCTCCCCGCCGCAGCACCAATGGCTCCACGAGCAGGGCTCGGAGCTGGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 72 bp CGGGGCCGGCGTGCACCCACCACTCACGCCAGGCGCTaGGCGACTGCTGCTGGACACACACGATCCCACCGA +
Preference number: 6 (lower is better)
Translates to: RGRRAPTTHARR*ATAAGHTRSHR
Trigger: TCGGTGGGATCGTGTGTGTCCAGCAGCAGTCGCGCAGCGCCTGGCGTGAGTGGTGGGTGCACGCCGGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS GCA 72 bp GGGTCGTCACAGAAGGTGCACATGGCGGGGCCGGCGTaGACCCACCACTCACGCCAGGCGCTGCGCGACTGC +
Preference number: 6 (lower is better)
Translates to: GSSQKVHMAGPA*THHSRQALRDC
Trigger: GCAGTCGCGCAGCGCCTGGCGTGAGTGGTGGGTGCACGCCGGCCCCGCCATGTGCACCTTCTGTGACGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS CAA 72 bp GGAGAGGGCCAGCTCCGAGCCCTGCTCGTGGAGCCATaGGTGCTGCGGCGGGGAGAAGAGGCCACAGGCGGG +
Preference number: 6 (lower is better)
Translates to: GEGQLRALLVEP*VLRRGEEATGG
Trigger: CCCGCCTGTGGCCTCTTCTCCCCGCCGCAGCACCAATGGCTCCACGAGCAGGGCTCGGAGCTGGCCCTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 72 bp GCGGCTCCGAAGCAGGAGAGGGCCAGCTCCGAGCCCTaGTCGTGGAGCCATTGGTGCTGCGGCGGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: AAPKQERASSEP*SWSHWCCGGEK
Trigger: CTTCTCCCCGCCGCAGCACCAATGGCTCCACGAGCAGGGCTCGGAGCTGGCCCTCTCCTGCTTCGGAGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS CCA 72 bp TCCCTCCAGAGTGCGCTCAGGGCCGGGACGTACAGCTaGAAGGTGGCCGGCTCCACAGGCAGCCCCGCCTTG +
Preference number: 6 (lower is better)
Translates to: SLQSALRAGTYS*KVAGSTGSPAL
Trigger: CAAGGCGGGGCTGCCTGTGGAGCCGGCCACCTTCCAGCTGTACGTCCCGGCCCTGAGCGCACTCTGGAGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275364.8
ENST00000407904.7
ENST00000447791.1
ENST00000471281.5
CDS CAA 90 bp CCCGTGGGGCCCGTGCCAGGGTCTCCTGCTCCTCAGAAAGAGCCCTaGTGTGCTACTGTGGTCGCCAACAGCCCCGCCGGCCACTGGCCC +
Preference number: 6 (lower is better)
Translates to: PVGPVPGSPAPQKEP*CATVVANSPAGHWP
Trigger: GGGCCAGTGGCCGGCGGGGCTGTTGGCGACCACAGTAGCACACAAGGGCTCTTTCTGAGGAGCAGGAGACCCTGGCACGGGCCCCACGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS CCA 72 bp TGTGCTACTGTGGTCGCCAACAGCCCCGCCGGCCACTaGCCCAGGACTCAGCGTGCCGTTCCTCCAGGACGC +
Preference number: 6 (lower is better)
Translates to: CATVVANSPAGH*PRTQRAVPPGR
Trigger: GCGTCCTGGAGGAACGGCACGCTGAGTCCTGGGCCAGTGGCCGGCGGGGCTGTTGGCGACCACAGTAGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS CAA 72 bp CCCGTGCCAGGGTCTCCTGCTCCTCAGAAAGAGCCCTaGTGTGCTACTGTGGTCGCCAACAGCCCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: PVPGSPAPQKEP*CATVVANSPAG
Trigger: GCCGGCGGGGCTGTTGGCGACCACAGTAGCACACAAGGGCTCTTTCTGAGGAGCAGGAGACCCTGGCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 72 bp GCCAGGGTCTCCTGCTCCTCAGAAAGAGCCCTTGTGTaGTACTGTGGTCGCCAACAGCCCCGCCGGCCACTG +
Preference number: 6 (lower is better)
Translates to: ARVSCSSERALV*YCGRQQPRRPL
Trigger: CAGTGGCCGGCGGGGCTGTTGGCGACCACAGTAGCACACAAGGGCTCTTTCTGAGGAGCAGGAGACCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS CCA 72 bp CTCCTGCTCCTCAGAAAGAGCCCTTGTGTGCTACTGTaGTCGCCAACAGCCCCGCCGGCCACTGGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: LLLLRKSPCVLL*SPTAPPATGPG
Trigger: TCCTGGGCCAGTGGCCGGCGGGGCTGTTGGCGACCACAGTAGCACACAAGGGCTCTTTCTGAGGAGCAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS TCA 72 bp CAGGAACATCGGCGAGGTGCCTGCGGTCCGGCACTGTaGGTGTGCTCTCAAGGAGGAAGCCAGTCAGCGGAC +
Preference number: 6 (lower is better)
Translates to: QEHRRGACGPAL*VCSQGGSQSAD
Trigger: GTCCGCTGACTGGCTTCCTCCTTGAGAGCACACTCACAGTGCCGGACCGCAGGCACCTCGCCGATGTTCCTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS GCA 72 bp CCCAGACACTCCCGTGGGGCCCGTGCCAGGGTCTCCTaGTCCTCAGAAAGAGCCCTTGTGTGCTACTGTGGT +
Preference number: 6 (lower is better)
Translates to: PRHSRGARARVS*SSERALVCYCG
Trigger: ACCACAGTAGCACACAAGGGCTCTTTCTGAGGAGCAGGAGACCCTGGCACGGGCCCCACGGGAGTGTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS CCA 72 bp CCAGTCCCCTGTCAAAGCCACCAAGCGCCGCCACTGTaGCAGGCTCCGAGGACACAACAGAGAACCAGACAG +
Preference number: 6 (lower is better)
Translates to: PVPCQSHQAPPL*QAPRTQQRTRQ
Trigger: CTGTCTGGTTCTCTGTTGTGTCCTCGGAGCCTGCCACAGTGGCGGCGCTTGGTGGCTTTGACAGGGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS GCA 72 bp GAAAACACATTTGCCTTCCCAGGCCCGTGGGAGGAGTaGTGTGAGGCTGAGACACAGCCCGGCTTGCTGACG +
Preference number: 6 (lower is better)
Translates to: ENTFAFPGPWEE*CEAETQPGLLT
Trigger: CGTCAGCAAGCCGGGCTGTGTCTCAGCCTCACAGCACTCCTCCCACGGGCCTGGGAAGGCAAATGTGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS CCA 72 bp ACCAGCCGGTTGGTGCGCCTGTCCTCCATGAGGACCTaGTCGTACTCGCTGGAGGAGACCATGAACAGGATG +
Preference number: 6 (lower is better)
Translates to: TSRLVRLSSMRT*SYSLEETMNRM
Trigger: CATCCTGTTCATGGTCTCCTCCAGCGAGTACGACCAGGTCCTCATGGAGGACAGGCGCACCAACCGGCTGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
ENST00000471281.5
ENST00000485329.1
ENST00000491117.5
ENST00000496740.6
CDS CAA 90 bp TCCTCCAGCCTGTGCGGGTCGCCCCTGAAGTCCGGGAAGTGCTTCTaGATGCTCACGGTCTTCACCTTCTCCACCAGGAGGTCCATCTTG +
Preference number: 6 (lower is better)
Translates to: SSSLCGSPLKSGKCF*MLTVFTFSTRRSIL
Trigger: CAAGATGGACCTCCTGGTGGAGAAGGTGAAGACCGTGAGCATCAAGAAGCACTTCCCGGACTTCAGGGGCGACCCGCACAGGCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
ENST00000471281.5
ENST00000491117.5
ENST00000496740.6
CDS CAA 90 bp AGCGTGCCGTTCCTCCAGGACGCAGACCGGGGCTCCCTACCAGCCTaGAGTGAGAGACCACAAGCAGCCTCTGAAGTCATCTTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: SVPFLQDADRGSLPA*SERPQAASEVIFLS
Trigger: AGAGAGGAAGATGACTTCAGAGGCTGCTTGTGGTCTCTCACTCAAGGCTGGTAGGGAGCCCCGGTCTGCGTCCTGGAGGAACGGCACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS CCA 72 bp AAGCGGACGTTCTCGGTGTCGATGGCGGTGGTGAAGTaGTGGAAGAGTGGCTTGCTGCGGTTCCGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: KRTFSVSMAVVK*WKSGLLRFRLF
Trigger: GAAGAGACGGAACCGCAGCAAGCCACTCTTCCACCACTTCACCACCGCCATCGACACCGAGAACGTCCGCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
ENST00000471281.5
ENST00000491117.5
ENST00000496740.6
CDS CCA 72 bp CACAGTTCAGAAAACACATTTGCCTTCCCAGGCCCGTaGGAGGAGTGCTGTGAGGCTGAGACACAGCCCGGC +
Preference number: 6 (lower is better)
Translates to: HSSENTFAFPGP*EECCEAETQPG
Trigger: GCCGGGCTGTGTCTCAGCCTCACAGCACTCCTCCCACGGGCCTGGGAAGGCAAATGTGTTTTCTGAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS CAA 72 bp GTGTCGATGGCGGTGGTGAAGTGGTGGAAGAGTGGCTaGCTGCGGTTCCGTCTCTTCCTGTCGAAGCACTGG +
Preference number: 6 (lower is better)
Translates to: VSMAVVKWWKSG*LRFRLFLSKHW
Trigger: CCAGTGCTTCGACAGGAAGAGACGGAACCGCAGCAAGCCACTCTTCCACCACTTCACCACCGCCATCGACAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
ENST00000471281.5
ENST00000491117.5
ENST00000496740.6
CDS CAA 72 bp TTCCTCCAGGACGCAGACCGGGGCTCCCTACCAGCCTaGAGTGAGAGACCACAAGCAGCCTCTGAAGTCATC +
Preference number: 6 (lower is better)
Translates to: FLQDADRGSLPA*SERPQAASEVI
Trigger: GATGACTTCAGAGGCTGCTTGTGGTCTCTCACTCAAGGCTGGTAGGGAGCCCCGGTCTGCGTCCTGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS TCA 72 bp CAGGTGCCCAGCAAGAAGGCCTACTCACTCACCAGCTaGAACTCGCTTCTCCGGCTGAAAGCCTCCCTGATG +
Preference number: 6 (lower is better)
Translates to: QVPSKKAYSLTS*NSLLRLKASLM
Trigger: CATCAGGGAGGCTTTCAGCCGGAGAAGCGAGTTTCAGCTGGTGAGTGAGTAGGCCTTCTTGCTGGGCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471281.5
CDS CAA 72 bp CTGGTGTGCTTCCCGAACCACGACTGCCAGGCATCCTaGCTAGGCACGGCCTGGGAAACATTCTCCGTTTCA +
Preference number: 6 (lower is better)
Translates to: LVCFPNHDCQAS*LGTAWETFSVS
Trigger: TGAAACGGAGAATGTTTCCCAGGCCGTGCCTAGCAAGGATGCCTGGCAGTCGTGGTTCGGGAAGCACACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS GCA 72 bp CCGAGGACACAACAGAGAACCAGACAGACAAGGCCTTaGCCGCATGAGGCTTCCAAGCTCACTGGAGAAGGA +
Preference number: 6 (lower is better)
Translates to: PRTQQRTRQTRP*PHEASKLTGEG
Trigger: TCCTTCTCCAGTGAGCTTGGAAGCCTCATGCGGGCAAGGCCTTGTCTGTCTGGTTCTCTGTTGTGTCCTCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS CAA 72 bp AGCACAGAGCGGCAGGACGATGAGAGGATAAATCATTaGGAAAGAAACCACGCTGCCCGGGTGGAGGAGCGC +
Preference number: 6 (lower is better)
Translates to: STERQDDERINH*ERNHAARVEER
Trigger: GCGCTCCTCCACCCGGGCAGCGTGGTTTCTTTCCAAATGATTTATCCTCTCATCGTCCTGCCGCTCTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS TCA 72 bp CCCCAGTACACCAGGGGGACACCAAGTCAGAGGATCTaGACTGGCTCACTGCCAATCACCCAGGAGATCAAA +
Preference number: 6 (lower is better)
Translates to: PQYTRGTPSQRI*TGSLPITQEIK
Trigger: TTTGATCTCCTGGGTGATTGGCAGTGAGCCAGTTCAGATCCTCTGACTTGGTGTCCCCCTGGTGTACTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485329.1
CDS GCA 72 bp AATACAAAAAGCAAGTGGACAGGAACATCGGCGAGGTaGCTGCGGTCCGGCACTGTGAGTGTGCTCTCAAGG +
Preference number: 6 (lower is better)
Translates to: NTKSKWTGTSAR*LRSGTVSVLSR
Trigger: CCTTGAGAGCACACTCACAGTGCCGGACCGCAGGCACCTCGCCGATGTTCCTGTCCACTTGCTTTTTGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS GCA 72 bp GCTCAAAACGGCAGCACTTTCGGTTTCCATCTGGTGTaGTTCCCGAACCACGACTGCCAGGCATCCTTGCTA +
Preference number: 6 (lower is better)
Translates to: AQNGSTFGFHLV*FPNHDCQASLL
Trigger: TAGCAAGGATGCCTGGCAGTCGTGGTTCGGGAAGCACACCAGATGGAAACCGAAAGTGCTGCCGTTTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS GCA 72 bp CTTGAGCCCCTGGACCCAGGGTGTGCAATGAGTAGGTaGTCAAAACGGCAGCACTTTCGGTTTCCATCTGGT +
Preference number: 6 (lower is better)
Translates to: LEPLDPGCAMSR*SKRQHFRFPSG
Trigger: ACCAGATGGAAACCGAAAGTGCTGCCGTTTTGAGCACCTACTCATTGCACACCCTGGGTCCAGGGGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS CAA 72 bp CAACAAGAACCCTTGAGCCACGACTGCCAGGCATCCTaGCTAGGCACGGCCTGGGAAACATTCTCCGTTTCA +
Preference number: 6 (lower is better)
Translates to: QQEPLSHDCQAS*LGTAWETFSVS
Trigger: TGAAACGGAGAATGTTTCCCAGGCCGTGCCTAGCAAGGATGCCTGGCAGTCGTGGCTCAAGGGTTCTTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447791.1
CDS CAA 72 bp CACACACACGGTCTCAACACAGTTCAGAAAACACATTaGCCTTCCCAGGCCCGTGGGAGGAGTGCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: HTHGLNTVQKTH*PSQARGRSAVR
Trigger: CCTCACAGCACTCCTCCCACGGGCCTGGGAAGGCAAATGTGTTTTCTGAACTGTGTTGAGACCGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS CAA 90 bp ACACACACACACACACACGGTCTCAACACAGTTCAGAAAACACATTaGCCTTCCCAGGCCCGTGGGAGGAGTGCTGTGAGGCTGAGACAC +
Preference number: 6 (lower is better)
Translates to: THTHTHGLNTVQKTH*PSQARGRSAVRLRH
Trigger: GTGTCTCAGCCTCACAGCACTCCTCCCACGGGCCTGGGAAGGCAAATGTGTTTTCTGAACTGTGTTGAGACCGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS CCA 72 bp AGCCACGACTGCCAGGCATCCTTGCTAGGCACGGCCTaGGAAACATTCTCCGTTTCATTTCAAATGCCTACA +
Preference number: 6 (lower is better)
Translates to: SHDCQASLLGTA*ETFSVSFQMPT
Trigger: TGTAGGCATTTGAAATGAAACGGAGAATGTTTCCCAGGCCGTGCCTAGCAAGGATGCCTGGCAGTCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447791.1
CDS CCA 72 bp GTACACCAGGGGGACACCAAGTCAGAGGATCTGAACTaGCTCACTGCCAATCACCCAGGAGATCAAAGCAAT +
Preference number: 6 (lower is better)
Translates to: VHQGDTKSEDLN*LTANHPGDQSN
Trigger: ATTGCTTTGATCTCCTGGGTGATTGGCAGTGAGCCAGTTCAGATCCTCTGACTTGGTGTCCCCCTGGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485329.1
CDS TCA 72 bp GACCCCAATGCCATGAAGCACAGAGCGGCAGGACGATaGGAGGATAAATCATTTGGAAAGAAACCACGCTGC +
Preference number: 6 (lower is better)
Translates to: DPNAMKHRAAGR*EDKSFGKKPRC
Trigger: GCAGCGTGGTTTCTTTCCAAATGATTTATCCTCTCATCGTCCTGCCGCTCTGTGCTTCATGGCATTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407653.1
CDS GCA 72 bp GCACGGCCTGGGAAACATTCTCCGTTTCATTTCAAATaGCTACAATACAGTAGGCGCTCTGCACTCGGCATG +
Preference number: 6 (lower is better)
Translates to: ARPGKHSPFHFK*LQYSRRSALGM
Trigger: CATGCCGAGTGCAGAGCGCCTACTGTATTGTAGGCATTTGAAATGAAACGGAGAATGTTTCCCAGGCCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS GCA 72 bp GGGGGACACCAAGTCAGAGGATCTGAACTGGCTCACTaGCAATCACCCAGGAGATCAAAGCAATCAATGTCA +
Preference number: 6 (lower is better)
Translates to: GGHQVRGSELAH*QSPRRSKQSMS
Trigger: TGACATTGATTGCTTTGATCTCCTGGGTGATTGGCAGTGAGCCAGTTCAGATCCTCTGACTTGGTGTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485329.1
CDS CCA 72 bp AATGCCTACAATACAGTAGGCGCTCTGCACTCGGCATaGCTGACAAGGACGTCACTGTATCCAGGTCTAATC +
Preference number: 6 (lower is better)
Translates to: NAYNTVGALHSA*LTRTSLYPGLI
Trigger: GATTAGACCTGGATACAGTGACGTCCTTGTCAGCCATGCCGAGTGCAGAGCGCCTACTGTATTGTAGGCATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407904.7
ENST00000447791.1
CDS CCA 72 bp AACCACGACTGCCAGGCATCCTTGCTAGGCACGGCCTaGGAAACATTCTCCGTTTCATTTCAAATGCCTACA +
Preference number: 6 (lower is better)
Translates to: NHDCQASLLGTA*ETFSVSFQMPT
Trigger: TGTAGGCATTTGAAATGAAACGGAGAATGTTTCCCAGGCCGTGCCTAGCAAGGATGCCTGGCAGTCGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407904.7
CDS GCA 72 bp CCCGCCTTGTTCTCGAAGGCCATCAGGAACATCCCATaGTTCTCATTTTCAGAATACTGCCAAGGAATGCCA +
Preference number: 6 (lower is better)
Translates to: PALFSKAIRNIP*FSFSEYCQGMP
Trigger: TGGCATTCCTTGGCAGTATTCTGAAAATGAGAAGCATGGGATGTTCCTGATGGCCTTCGAGAACAAGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275364.8
ENST00000407904.7
ENST00000447791.1
ENST00000471281.5
CDS GCA 72 bp TTCGTTTCTAGGAGAAGTTGTAAGGGCTTCGTGTTCTaGACTGCTAGGAAACACCACCCTGACTTAGGGTCG +
Preference number: 6 (lower is better)
Translates to: FVSRRSCKGFVF*TARKHHPDLGS
Trigger: CGACCCTAAGTCAGGGTGGTGTTTCCTAGCAGTGCAGAACACGAAGCCCTTACAACTTCTCCTAGAAACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496740.6
CDS CAA 90 bp ATGCTCCACAATTCCCTTGGTGGCTTTCCTAGCCAGCAGGATATCTaGCTTACTAGGAAAGTAATTCAGCTGGCCGATCCGGTCCAAGTT +
Preference number: 6 (lower is better)
Translates to: MLHNSLGGFPSQQDI*LTRKVIQLADPVQV
Trigger: AACTTGGACCGGATCGGCCAGCTGAATTACTTTCCTAGTAAGCAAGATATCCTGCTGGCTAGGAAAGCCACCAAGGGAATTGTGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
ENST00000471281.5
ENST00000485329.1
ENST00000491117.5
ENST00000496740.6
CDS GCA 72 bp ACCATCTTAAAGGGGATCTTCTTAATAACGAAGTCATaGTCCACAATTCCCTTGGTGGCTTTCCTAGCCAGC +
Preference number: 6 (lower is better)
Translates to: TILKGIFLITKS*STIPLVAFLAS
Trigger: GCTGGCTAGGAAAGCCACCAAGGGAATTGTGGAGCATGACTTCGTTATTAAGAAGATCCCCTTTAAGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
ENST00000471281.5
ENST00000485329.1
ENST00000491117.5
ENST00000496740.6
CDS CAA 90 bp TTAAAGGGGATCTTCTTAATAACGAAGTCATGCTCCACAATTCCCTaGGTGGCTTTCCTAGCCAGCAGGATATCTTGCTTACTAGGAAAG +
Preference number: 6 (lower is better)
Translates to: LKGIFLITKSCSTIP*VAFLASRISCLLGK
Trigger: CTTTCCTAGTAAGCAAGATATCCTGCTGGCTAGGAAAGCCACCAAGGGAATTGTGGAGCATGACTTCGTTATTAAGAAGATCCCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
ENST00000471281.5
ENST00000485329.1
ENST00000491117.5
ENST00000496740.6
CDS GCA 72 bp ATCAGGAACATCCCATGCTTCTCATTTTCAGAATACTaGCAAGGAATGCCAAGCTTATCTCGTGCATCAACA +
Preference number: 6 (lower is better)
Translates to: IRNIPCFSFSEY*QGMPSLSRAST
Trigger: TGTTGATGCACGAGATAAGCTTGGCATTCCTTGGCAGTATTCTGAAAATGAGAAGCATGGGATGTTCCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275364.8
ENST00000407904.7
ENST00000447791.1
ENST00000471281.5
CDS CAA 72 bp ATCTTCTTAATAACGAAGTCATGCTCCACAATTCCCTaGGTGGCTTTCCTAGCCAGCAGGATATCTTGCTTA +
Preference number: 6 (lower is better)
Translates to: IFLITKSCSTIP*VAFLASRISCL
Trigger: TAAGCAAGATATCCTGCTGGCTAGGAAAGCCACCAAGGGAATTGTGGAGCATGACTTCGTTATTAAGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275364.8
ENST00000407653.1
ENST00000407904.7
ENST00000471281.5
ENST00000485329.1
ENST00000491117.5
ENST00000496740.6
CDS CAA 90 bp CTCTTGAGCCTTTTATATAGCATCTGCCTCCATCCCGTGTTTTGGTaGTTGATCATTACAACTTACGGTGATTTAGAGCTTGCTTGGACT +
Preference number: 6 (lower is better)
Translates to: LLSLLYSICLHPVFW*LIITTYGDLELAWT
Trigger: AGTCCAAGCAAGCTCTAAATCACCGTAAGTTGTAATGATCAACAACCAAAACACGGGATGGAGGCAGATGCTATATAAAAGGCTCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471281.5
CDS CAA 90 bp TTGAGCCTTTTATATAGCATCTGCCTCCATCCCGTGTTTTGGTTGTaGATCATTACAACTTACGGTGATTTAGAGCTTGCTTGGACTGTT +
Preference number: 6 (lower is better)
Translates to: LSLLYSICLHPVFWL*IITTYGDLELAWTV
Trigger: AACAGTCCAAGCAAGCTCTAAATCACCGTAAGTTGTAATGATCAACAACCAAAACACGGGATGGAGGCAGATGCTATATAAAAGGCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471281.5
CDS CCA 72 bp AGCCTTTTATATAGCATCTGCCTCCATCCCGTGTTTTaGTTGTTGATCATTACAACTTACGGTGATTTAGAG +
Preference number: 6 (lower is better)
Translates to: SLLYSICLHPVF*LLIITTYGDLE
Trigger: CTCTAAATCACCGTAAGTTGTAATGATCAACAACCAAAACACGGGATGGAGGCAGATGCTATATAAAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471281.5
CDS CAA 72 bp TTATATAGCATCTGCCTCCATCCCGTGTTTTGGTTGTaGATCATTACAACTTACGGTGATTTAGAGCTTGCT +
Preference number: 6 (lower is better)
Translates to: LYSICLHPVFWL*IITTYGDLELA
Trigger: AGCAAGCTCTAAATCACCGTAAGTTGTAATGATCAACAACCAAAACACGGGATGGAGGCAGATGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471281.5
CDS CAA 72 bp CTTTTATATAGCATCTGCCTCCATCCCGTGTTTTGGTaGTTGATCATTACAACTTACGGTGATTTAGAGCTT +
Preference number: 6 (lower is better)
Translates to: LLYSICLHPVFW*LIITTYGDLEL
Trigger: AAGCTCTAAATCACCGTAAGTTGTAATGATCAACAACCAAAACACGGGATGGAGGCAGATGCTATATAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471281.5