RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GMPPA (Homo sapiens)

Ensembl gene IDs: ENSG00000144591

Ensembl transcript IDs: ENST00000313597.10, ENST00000341142.7, ENST00000341142.8, ENST00000358215.8, ENST00000373908.5, ENST00000373917.7, ENST00000435316.6, ENST00000443704.5, ENST00000455657.6, ENST00000480034.1, ENST00000480506.6, ENST00000481170.1, ENST00000496536.2, ENST00000622191.1, ENST00000622191.2, ENST00000635609.2, ENST00000682058.1, ENST00000682102.1, ENST00000682340.1, ENST00000682435.1, ENST00000682443.1, ENST00000682481.1, ENST00000682488.1, ENST00000682576.1, ENST00000683106.1, ENST00000683131.1, ENST00000683203.1, ENST00000683241.1, ENST00000683382.1, ENST00000683386.1, ENST00000683402.1, ENST00000683591.1, ENST00000683598.1, ENST00000683617.1, ENST00000683626.1, ENST00000683691.1, ENST00000683746.1, ENST00000683752.1, ENST00000683864.1, ENST00000683946.1, ENST00000683964.1, ENST00000684227.1, ENST00000684242.1, ENST00000684274.1, ENST00000684334.1, ENST00000684412.1, ENST00000684562.1, ENST00000684669.1, ENST00000684706.1, ENST00000684729.1

Found 502 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCACTGCCAGCAGGGAGGGAGCCCTCCTGCCCATCTGTGCCCCTaGTCTCATGCCCCCGGTGACTCACACAGGGCCTGGCACACAGCA +
Preference number: 1 (lower is better)
Translates to: GHCQQGGSPPAHLCP*SHAPGDSHRAWHTA
Trigger: TGCTGTGTGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGACCAGGGGCACAGATGGGCAGGAGGGCTCCCTCCCTGCTGGCAGTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480034.1
3UTR GCA 90 bp CCTCCACGCGGGCCCAGCGTCCCACGGTGCTCCCCCAGCCCACGATaGTATGCAGAACACACGTGTGCTCCTGCAAAGTGGCTCCATGGA +
Preference number: 1 (lower is better)
Translates to: PPRGPSVPRCSPSPR*YAEHTCAPAKWLHG
Trigger: TCCATGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGGCCCGCGTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR CCA 90 bp GGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTaGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGAACAATC +
Preference number: 1 (lower is better)
Translates to: GRSWGPSGSPTQRMI*LVKLRLSSLCGRTI
Trigger: GATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443704.5
ENST00000622191.1
3UTR CCA 90 bp TCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTaGCAGAACAATCGAGTTCAGGATGAGCACCTCGGCAGGGATCCG +
Preference number: 1 (lower is better)
Translates to: SEDDLVGEASAQLLV*QNNRVQDEHLGRDP
Trigger: CGGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR-3UTR CCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGGGAGTGGGTAGGAGCTaGGGGCCTTCTGGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: QESPGHPHCSPACDDPAWGVGRS*GPSGSP
Trigger: AGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCC...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000341142.7
ENST00000358215.8
ENST00000373908.5
ENST00000622191.1
3UTR-3UTR CCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGAGTGGGTAGGAGCTaGGGGCCTTCTGGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPGVGRS*GPSGSP
Trigger: AGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCC...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000341142.7
ENST00000358215.8
ENST00000373908.5
ENST00000622191.1
3UTR-3UTR GCA 90 bp AGGCTCTCACTGTCCATGCGGGCTCGGGGATCGTTGGGGTTAGGGTCACTGGGGCTCCATGGAGGACGATaGTCTCCCGGAGCCGCACAC +
Preference number: 2 (lower is better)
Translates to: RLSLSMRARGSLGLGSLGLHGGR*SPGAAH
Trigger: GTGTGCGGCTCCGGGAGAGCATCGTCCTCCATGGAG...CCCCAGTGACCCTAACCCCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR-3UTR CCA 90 bp CTTCCCGTCCTTGAAGAGGCTCTCACTGTCCATGCGGGCTCGGGGATCGTTGGGTCCCGATGGAGACGTTaGGGCCCAGCACAGCCGAGG +
Preference number: 2 (lower is better)
Translates to: LPVLEEALTVHAGSGIVGSRWRR*GPAQPR
Trigger: CCTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGA...CCCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCCTCTTCAAGGACGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR CAA 90 bp ACTCGGCAGCCCAGGATGGTGATAGCAGGCAGCAGCTTCCCGTCCTaGAAGAGGCTCTCACTGTCCATGCGGGCTCGGGGATCGTTGGGG +
Preference number: 2 (lower is better)
Translates to: TRQPRMVIAGSSFPS*KRLSLSMRARGSLG
Trigger: CCCCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGGCTGCCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGGAGTGGGTAGGAGCTaGGGGCCTTCTGGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVGVGRS*GPSGSP
Trigger: AGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313597.10
ENST00000341142.7
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
ENST00000622191.1
3UTR-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGGAGTGGGTAGGAGCTaGGGGCCTTCTGGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLGVGRS*GPSGSP
Trigger: AGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCC...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313597.10
ENST00000341142.7
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000622191.1
3UTR-3UTR CCA 90 bp AGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCCGAGGGGGCCACCTTaGCGGTCGGGTGGATGTACA +
Preference number: 2 (lower is better)
Translates to: RSWGPSGSPTQRMIWLVKPRGPP*RSGGCT
Trigger: TGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGG...CTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR-3UTR CCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCGGAGTGGGTAGGAGCTaGGGGCCTTCTGGCAGCCCT +
Preference number: 2 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPGVGRS*GPSGSP
Trigger: AGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCC...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000622191.1
3UTR-3UTR TCA 90 bp GTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGCAGCTTCCCGTCCTTaGAGAGGCTCTCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: VGRSWGPSGSPTQRMIWLAASRP*RGSHCP
Trigger: TGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGC...CAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTGCAAAGTGGCTCCATaGAGGACGATGCTCTCCCGG +
Preference number: 2 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSCKVAP*RTMLSR
Trigger: CCGGGAGAGCATCGTCCTCCATGGAGCCACTTTGCA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR-3UTR TCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCTTGCTCCCCGGCATGTaGCGATCCAGCCTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPLLPGM*RSSLAF
Trigger: GAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAA...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000622191.1
3UTR CAA 90 bp AGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTaGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGAACAATCGAG +
Preference number: 2 (lower is better)
Translates to: RSWGPSGSPTQRMIW*VKLRLSSLCGRTIE
Trigger: CTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443704.5
ENST00000622191.1
3UTR-3UTR GCA 90 bp TGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGTGCAGAACACACGTGTaGTCCTGCAAAGTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: WGPSGSPTQRMIWLVKLRCRTHV*SCKVAP
Trigger: TGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCA...CCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR CAA 90 bp CCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTaGTGTGGCAGAACAATCGAGTTCAGGATGAGCACCTCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: PTQRMIWLVKLRLSS*CGRTIEFRMSTSAG
Trigger: CCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR GCA 72 bp TGGGGGTACCCTCCACGCGGGCCCAGCGTCCCACGGTaGTCCCCCAGCCCACGATGCTATGCAGAACACACG +
Preference number: 3 (lower is better)
Translates to: WGYPPRGPSVPR*SPSPRCYAEHT
Trigger: CGTGTGTTCTGCATAGCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGGCCCGCGTGGAGGGTACCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR-3UTR CAA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGCCGAGGGGGCCACCTaGGCGGTCGGGTGGATGTAC +
Preference number: 3 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVAEGAT*AVGWMY
Trigger: GTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR GCA 72 bp GGGCCCAGCGTCCCACGGTGCTCCCCCAGCCCACGATaGTATGCAGAACACACGTGTGCTCCTGCAAAGTGG +
Preference number: 3 (lower is better)
Translates to: GPSVPRCSPSPR*YAEHTCAPAKW
Trigger: CCACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR GCA 72 bp ACGTGTGCTCCTGCAAAGTGGCTCCATGGAGGACGATaGTCTCCCGGAGCCGCACACCCTCACCCACGGTCA +
Preference number: 3 (lower is better)
Translates to: TCAPAKWLHGGR*SPGAAHPHPRS
Trigger: TGACCGTGGGTGAGGGTGTGCGGCTCCGGGAGAGCATCGTCCTCCATGGAGCCACTTTGCAGGAGCACACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR-3UTR CAA 90 bp CAGCCCACGATGCTATGCAGAACACACGTGTGCTCCTGCAAAGTGGCTCCATGGTTCCCGATGGAGACGTaGGGGCCCAGCACAGCCGAG +
Preference number: 3 (lower is better)
Translates to: QPTMLCRTHVCSCKVAPWFPMET*GPSTAE
Trigger: CTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGAA...CCATGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR TCA 72 bp TCAGCTCCTTGTGTGGCAGAACAATCGAGTTCAGGATaGGCACCTCGGCAGGGATCCGGACTCGGCAGCCCA +
Preference number: 3 (lower is better)
Translates to: SAPCVAEQSSSG*APRQGSGLGSP
Trigger: TGGGCTGCCGAGTCCGGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR CCA 72 bp GATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTaGCAGAACAATCGAGTTCAGGATGAGCACCTCGGC +
Preference number: 3 (lower is better)
Translates to: DLVGEASAQLLV*QNNRVQDEHLG
Trigger: GCCGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp CTGGGGGTACCCTCCACGCGGGCCCAGCGTCCCACGGTGCTCCCCCAGCCCACGAGATGCACGTATATCTaGCCCTGCCCTGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGVPSTRAQRPTVLPQPTRCTYI*PCPARA
Trigger: AGCCCTGGCAGGGCAGGGCCAGATATACGTGCATCT...CGTGGGCTGGGGGAGCACCGTGGGACGCTGGGCCCGCGTGGAGGGTACCCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp CCCACGGTCACCCCCTTCCCGATGGAGACGTTGGGGCCCAGCACAGCCGAGGGGAGGAGTAAGAAAGGGTaGCGCTGGCGTCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PTVTPFPMETLGPSTAEGRSKKG*RWRRWA
Trigger: AGCCCACCGACGCCAGCGTCACCCTTTCTTACTCCT...CCCCTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp CCCATCTGTGCCCCTGGTCTCATGCCCCCGGTGACTCACACAGGGCCTGGCACACCACTGGCCATCAGCTaGGGGGTTCCCCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PICAPGLMPPVTHTGPGTPLAIS*GVPPAL
Trigger: CAGGGCTGGGGGAACCCCTCAGCTGATGGCCAGTGG...TGTGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGACCAGGGGCACAGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR GCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGGCCCCCTGGGGTGTaGTTGGCCAGCCGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPGPPGV*LASRSG
Trigger: CCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCC...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCCCAGCGTCCCACGGTaGTCCCCCAGCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGPSVPR*SPSPRC
Trigger: GCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CCCATCTGTGCCCCTGGTCTCATGCCCCCGGTGACTCACACAGGGCCTGGCACAGGGAGGGAGCCCTCCTaGCCATCTGTGCCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PICAPGLMPPVTHTGPGTGREPS*PSVPLV
Trigger: GACCAGGGGCACAGATGGGCAGGAGGGCTCCCTCCC...TGTGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGACCAGGGGCACAGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CCA 90 bp CCCATCTGTGCCCCTGGTCTCATGCCCCCGGTGACTCACACAGGGCCTGGCACAGGGTTCCCCCAGCCCTaGCCCCCAGGAAGCCATACC +
Preference number: 4 (lower is better)
Translates to: PICAPGLMPPVTHTGPGTGFPQP*PPGSHT
Trigger: GGTATGGCTTCCTGGGGGCCAGGGCTGGGGGAACCC...TGTGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGACCAGGGGCACAGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR GCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTGGGCCCCCTGGGGTGTaGTTGGCCAGCCGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLGPPGV*LASRSG
Trigger: CCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCC...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGATCCATGGGCCCCCTaGGGTGTGCTTGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPDPWAP*GVLGQP
Trigger: CGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATC...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CCCTCACCCACGGTCACCCCCTTCCCGATGGAGACGTTGGGGCCCAGCACAGCCCAATCGAGTTCAGGATaGGCACCTCGGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: PSPTVTPFPMETLGPSTAQSSSG*APRQGS
Trigger: GGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTG...GGCTGTGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGGTGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CCCACGGTCACCCCCTTCCCGATGGAGACGTTGGGGCCCAGCACAGCCGAGGGGACGTATATCTGGCCCTaGCCTGCCAGGGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: PTVTPFPMETLGPSTAEGTYIWP*PARAEN
Trigger: GTTTTCAGCCCTGGCAGGGCAGGGCCAGATATACGT...CCCCTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGGGCCCCCTGGGGTGTaGTTGGCCAGCCGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLGPPGV*LASRSG
Trigger: CCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCC...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGGGCCCCCTGGGGTGTaGTTGGCCAGCCGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVGPPGV*LASRSG
Trigger: CCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp CCCATCTGTGCCCCTGGTCTCATGCCCCCGGTGACTCACACAGGGCCTGGCACACTCCATGGAGGACGATaGTCTCCCGGAGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: PICAPGLMPPVTHTGPGTLHGGR*SPGAAH
Trigger: GTGTGCGGCTCCGGGAGAGCATCGTCCTCCATGGAG...TGTGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGACCAGGGGCACAGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCCCAGCGTCCCACGGTaGTCCCCCAGCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSPSVPR*SPSPRC
Trigger: GCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCCCAGCGTCCCACGGTaGTCCCCCAGCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLPSVPR*SPSPRC
Trigger: GCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR GCA 90 bp GTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGCCCAGCGTCCCACGGTaGTCCCCCAGCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: VGRSWGPSGSPTQRMIWLPSVPR*SPSPRC
Trigger: GCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGG...CAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CCCATCTGTGCCCCTGGTCTCATGCCCCCGGTGACTCACACAGGGCCTGGCACAACACAGAGGAACGAATaGTCCCCGGGGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: PICAPGLMPPVTHTGPGTTQRNE*SPGPLA
Trigger: GGCCAGTGGCCCCGGGGAGCATTCGTTCCTCTGTGT...TGTGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGACCAGGGGCACAGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPPLGCA*PAVLGE
Trigger: CTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGG...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGPLGCA*PAVLGE
Trigger: CTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTCCGAGGGGGCCACCTTaGCGGTCGGGTGGATGTACA +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPPRGPP*RSGGCT
Trigger: TGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGG...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCGAGGGGGCCACCTTaGCGGTCGGGTGGATGTACA +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWPRGPP*RSGGCT
Trigger: TGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGG...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTTCCCGATGGAGACGTTaGGGCCCAGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPSRWRR*GPAQPR
Trigger: CCTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGA...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGGCCAGCCGTTCTGGGTaGGTGTCCTGGTATCGGCTC +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWASRSG*VSWYRL
Trigger: GAGCCGATACCAGGACACTCACCCAGAACGGCTGGC...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp TGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGGGGCCCCCTGGGGTGTaGTTGGCCAGCCGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WGPSGSPTQRMIWLVKLRGPPGV*LASRSG
Trigger: CCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCC...CCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCCTCCATGGAGGACGATaGTCTCCCGGAGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPALHGGR*SPGAAH
Trigger: GTGTGCGGCTCCGGGAGAGCATCGTCCTCCATGGAG...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCTCCATGGAGGACGATaGTCTCCCGGAGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGLHGGR*SPGAAH
Trigger: GTGTGCGGCTCCGGGAGAGCATCGTCCTCCATGGAG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CCCTCACCCACGGTCACCCCCTTCCCGATGGAGACGTTGGGGCCCAGCACAGCCCAGCCCACGATGCTATaGAGAACACACGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSPTVTPFPMETLGPSTAQPTML*RTHVCS
Trigger: GGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTG...GGCTGTGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGGTGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGGGCTCTCACTGTCCATaGGGGCTCGGGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWGSHCP*GLGDRW
Trigger: CCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCC...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCGGCTCTCACTGTCCATaGGGGCTCGGGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPAGSHCP*GLGDRW
Trigger: CCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCC...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCCCTGCTCTAGGCGGATaGTACCTGCCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPAPALGG*YLPLAT
Trigger: TGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGG...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCCTGCTCTAGGCGGATaGTACCTGCCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGPALGG*YLPLAT
Trigger: TGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGGCTCTCACTGTCCATGCGGGCTCGGGGATCGTTGGGGTTAGGGTCACTGGGGCCTGCTCTAGGCGGATaGTACCTGCCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: RLSLSMRARGSLGLGSLGPALGG*YLPLAT
Trigger: TGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGG...CCCCAGTGACCCTAACCCCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp AGGGGAGTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RGVGRSWGPSGSPTQRMIPLGCA*PAVLGE
Trigger: CTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGG...GATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGATCCATGGGCCCCCTaGGGTGTGCTTGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLDPWAP*GVLGQP
Trigger: CGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATC...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGATCCATGGGCCCCCTaGGGTGTGCTTGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSDPWAP*GVLGQP
Trigger: CGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp AGGGGAGTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTCCCGATGGAGACGTTaGGGCCCAGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: RGVGRSWGPSGSPTQRMISRWRR*GPAQPR
Trigger: CCTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGA...GATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTCACCCCCTTCCCGATaGAGACGTTGGGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPASPPSR*RRWGPA
Trigger: TGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGA...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTTCACCCCCTTCCCGATaGAGACGTTGGGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPSPPSR*RRWGPA
Trigger: TGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGA...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCGGACTCGGCAGCCCAGGATGGTGATAGCAGGCAGCAGCTTCCCGTCCTTGAAGGAGTGGGTAGGAGCTaGGGGCCTTCTGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PDSAAQDGDSRQQLPVLEGVGRS*GPSGSP
Trigger: AGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCC...TTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGGCTGCCGAGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCAGGAGTAAGAAAGGGTaGCGCTGGCGTCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPARSKKG*RWRRWA
Trigger: AGCCCACCGACGCCAGCGTCACCCTTTCTTACTCCT...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGAGGAGTAAGAAAGGGTaGCGCTGGCGTCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWRSKKG*RWRRWA
Trigger: AGCCCACCGACGCCAGCGTCACCCTTTCTTACTCCT...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTGCTCCCCGGCATGTaGCGATCCAGCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGLLPGM*RSSLAF
Trigger: GAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAA...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CCGGACTCGGCAGCCCAGGATGGTGATAGCAGGCAGCAGCTTCCCGTCCTTGAACTCCATGGAGGACGATaGTCTCCCGGAGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: PDSAAQDGDSRQQLPVLELHGGR*SPGAAH
Trigger: GTGTGCGGCTCCGGGAGAGCATCGTCCTCCATGGAG...TTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGGCTGCCGAGTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCCCCAGCGTCCCACGGTaGTCCCCCAGCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPPSVPR*SPSPRC
Trigger: GCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGG...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCGCACACCCTCACCCACGGTCACCCCCTTCCCGATGGAGACGTTGGGGCCCAGAGGTTAAACTCCTGCTaGGCGGCTTCTAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: PHTLTHGHPLPDGDVGAQRLNSC*AASRNW
Trigger: CCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCT...CTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGGTGAGGGTGTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVPLGCA*PAVLGE
Trigger: CTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGG...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCGAGGGGGCCACCTTaGCGGTCGGGTGGATGTACA +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVPRGPP*RSGGCT
Trigger: TGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGG...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCCGAGGGGGCCACCTTaGCGGTCGGGTGGATGTACA +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLPRGPP*RSGGCT
Trigger: TGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCCGAGGGGGCCACCTTaGCGGTCGGGTGGATGTACA +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSPRGPP*RSGGCT
Trigger: TGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCTCCCGATGGAGACGTTaGGGCCCAGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVSRWRR*GPAQPR
Trigger: CCTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGA...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTCCCGATGGAGACGTTaGGGCCCAGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLSRWRR*GPAQPR
Trigger: CCTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCGAGCTGGGGGCCTTCTaGCAGCCCTACTCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGELGAF*QPYSED
Trigger: ATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTC...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGGAGCTGGGGGCCTTCTaGCAGCCCTACTCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWELGAF*QPYSED
Trigger: ATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTC...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGGAGTGGGTAGGAGCTaGGGGCCTTCTGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSGVGRS*GPSGSP
Trigger: AGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp AAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCCCCGGGGCCACTGGCCGCCCATCTGTGCCCCTaGTCTCATGCCCCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: KKKHACTQRNECSPGPLAAHLCP*SHAPGD
Trigger: GTCACCGGGGGCATGAGACCAGGGGCACAGATGGGC...GGCCAGTGGCCCCGGGGAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR TCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTGGCCACAAGCCTGGTaGGTCCTCCAATTGCCCATC +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGWPQAW*VLQLPI
Trigger: GATGGGCAATTGGAGGACTCACCAGGCTTGTGGCCA...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGTGGCCACAAGCCTGGTaGGTCCTCCAATTGCCCATC +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWWPQAW*VLQLPI
Trigger: GATGGGCAATTGGAGGACTCACCAGGCTTGTGGCCA...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGCCAGCCGTTCTGGGTaGGTGTCCTGGTATCGGCTC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSASRSG*VSWYRL
Trigger: GAGCCGATACCAGGACACTCACCCAGAACGGCTGGC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGCCAGCCGTTCTGGGTaGGTGTCCTGGTATCGGCTC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVASRSG*VSWYRL
Trigger: GAGCCGATACCAGGACACTCACCCAGAACGGCTGGC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp GTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGCCAGCCGTTCTGGGTaGGTGTCCTGGTATCGGCTC +
Preference number: 4 (lower is better)
Translates to: VGRSWGPSGSPTQRMIWLASRSG*VSWYRL
Trigger: GAGCCGATACCAGGACACTCACCCAGAACGGCTGGC...CAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCGCAGCTTCCCGTCCTTaGAGAGGCTCTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPAAASRP*RGSHCP
Trigger: TGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGC...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGCAGCTTCCCGTCCTTaGAGAGGCTCTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPAASRP*RGSHCP
Trigger: TGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGC...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTCAATCGAGTTCAGGATaGGCACCTCGGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPQSSSG*APRQGS
Trigger: GGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTG...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCAATCGAGTTCAGGATaGGCACCTCGGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWQSSSG*APRQGS
Trigger: GGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTG...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTATTGAGCACGAAGAATaGCTCGGGGCTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPIEHEE*LGAPSQ
Trigger: CTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCAAT...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCTCCATGGAGGACGATaGTCTCCCGGAGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSLHGGR*SPGAAH
Trigger: GTGTGCGGCTCCGGGAGAGCATCGTCCTCCATGGAG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGGCTCTCACTGTCCATaGGGGCTCGGGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSGSHCP*GLGDRW
Trigger: CCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGGCTCTCACTGTCCATaGGGGCTCGGGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVGSHCP*GLGDRW
Trigger: CCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp GCTCCCCCAGCCCACGATGCTATGCAGAACACACGTGTGCTCCTGCAAAGTGGCGGCTCTCACTGTCCATaGGGGCTCGGGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: APPAHDAMQNTRVLLQSGGSHCP*GLGDRW
Trigger: CCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCC...GCCACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCCAGGCCATCCACATTaGTCCCCGGCATGTGACGAT +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGPGHPH*SPACDD
Trigger: ATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCGCGGCTTCTAGGAACTaGGTGAGGGGCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPAAASRN*VRGSSG
Trigger: ACCTGATGAGCCCCTCACCCAGTTCCTAGAAGCCGC...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCCTGCTCTAGGCGGATaGTACCTGCCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLPALGG*YLPLAT
Trigger: TGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCTTGGCCAGCCGTTCTaGGTGAGTGTCCTGGTATCG +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGLGQPF*VSVLVS
Trigger: CGATACCAGGACACTCACCCAGAACGGCTGGCCAAG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCGATCCATGGGCCCCCTaGGGTGTGCTTGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPDPWAP*GVLGQP
Trigger: CGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATC...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTATTCCCTCGGATCCATaGGCCCCCTGGGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLIPSDP*APWGVL
Trigger: AAGCACACCCCAGGGGGCCCATGGATCCGAGGGAAT...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTCACCCCCTTCCCGATaGAGACGTTGGGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLSPPSR*RRWGPA
Trigger: TGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTCACCCCCTTCCCGATaGAGACGTTGGGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSSPPSR*RRWGPA
Trigger: TGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp TTCAGGATGAGCACCTCGGCAGGGATCCGGACTCGGCAGCCCAGGATGGTGATATCACCCCCTTCCCGATaGAGACGTTGGGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: FRMSTSAGIRTRQPRMVISPPSR*RRWGPA
Trigger: TGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGA...TATCACCATCCTGGGCTGCCGAGTCCGGATCCCTGCCGAGGTGCTCATCCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGCAAAGTGGCTCCATaGAGGACGATGCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPACKVAP*RTMLSR
Trigger: CCGGGAGAGCATCGTCCTCCATGGAGCCACTTTGCA...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTGCAAAGTGGCTCCATaGAGGACGATGCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGCKVAP*RTMLSR
Trigger: CCGGGAGAGCATCGTCCTCCATGGAGCCACTTTGCA...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CTTCCCGTCCTTGAAGAGGCTCTCACTGTCCATGCGGGCTCGGGGATCGTTGGGGAGCTGGGGGCCTTCTaGCAGCCCTACTCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LPVLEEALTVHAGSGIVGELGAF*QPYSED
Trigger: ATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTC...CCCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCCTCTTCAAGGACGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGGTACCTCGGATCCATaGGCCCCCTGGGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLGTSDP*APWGVL
Trigger: AAGCACACCCCAGGGGGCCCATGGATCCGAGGTACC...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373917.7
3UTR CAA 72 bp CCCAGGATGGTGATAGCAGGCAGCAGCTTCCCGTCCTaGAAGAGGCTCTCACTGTCCATGCGGGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PRMVIAGSSFPS*KRLSLSMRARG
Trigger: TCCCCGAGCCCGCATGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCCTTCTAGGAACTGGGTaGGGGGCTCATCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPALLGTG*GAHQVG
Trigger: ACCAACCTGATGAGCCCCTCACCCAGTTCCTAGAAG...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTCTAGGAACTGGGTaGGGGGCTCATCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWLLGTG*GAHQVG
Trigger: ACCAACCTGATGAGCCCCTCACCCAGTTCCTAGAAG...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCAGGAGTAAGAAAGGGTaGCGCTGGCGTCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSRSKKG*RWRRWA
Trigger: AGCCCACCGACGCCAGCGTCACCCTTTCTTACTCCT...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTGCAGCTTCCCGTCCTTaGAGAGGCTCTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLAASRP*RGSHCP
Trigger: TGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGC...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTCAATCGAGTTCAGGATaGGCACCTCGGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLQSSSG*APRQGS
Trigger: GGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTG...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTTGCTCCCCGGCATGTaGCGATCCAGCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLLLPGM*RSSLAF
Trigger: GAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTTGCTCCCCGGCATGTaGCGATCCAGCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSLLPGM*RSSLAF
Trigger: GAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp CAGAACAATCGAGTTCAGGATGAGCACCTCGGCAGGGATCCGGACTCGGCAGCCTTGCTCCCCGGCATGTaGCGATCCAGCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QNNRVQDEHLGRDPDSAALLPGM*RSSLAF
Trigger: GAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAA...GGCTGCCGAGTCCGGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCCTTCACTCCAGCTCTaGCGCCCGCTACTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSPSLQL*RPLLQA
Trigger: AGCTTGCAGTAGCGGGCGGCAGAGCTGGAGTGAAGG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313597.10
ENST00000373917.7
CDS-3UTR GCA 90 bp AGGGGAGTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCATTGAGCACGAAGAATaGCTCGGGGCTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGVGRSWGPSGSPTQRMIIEHEE*LGAPSQ
Trigger: CTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCAAT...GATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTACGTATATCTGGCCCTaGCCTGCCAGGGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPTYIWP*PARAEN
Trigger: GTTTTCAGCCCTGGCAGGGCAGGGCCAGATATACGT...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCACGTATATCTGGCCCTaGCCTGCCAGGGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPATYIWP*PARAEN
Trigger: GTTTTCAGCCCTGGCAGGGCAGGGCCAGATATACGT...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CCCATCTGTGCCCCTGGTCTCATGCCCCCGGTGACTCACACAGGGCCTGGCACATGCAGAACACACGTGTaGTCCTGCAAAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PICAPGLMPPVTHTGPGTCRTHV*SCKVAP
Trigger: TGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCA...TGTGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGACCAGGGGCACAGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR GCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCAGCCCACGATGCTATaGAGAACACACGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGQPTML*RTHVCS
Trigger: GGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGTCCCCCAGCCCACGATaGTATGCAGAACACACGTGT +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWSPSPR*YAEHTC
Trigger: ACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGA...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPPLGCA*PAVLGE
Trigger: CTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGG...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCATTCCCTCGGATCCATaGGCCCCCTGGGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVIPSDP*APWGVL
Trigger: AAGCACACCCCAGGGGGCCCATGGATCCGAGGGAAT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCTCCCGATGGAGACGTTaGGGCCCAGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPSRWRR*GPAQPR
Trigger: CCTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGA...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTGAGCTGGGGGCCTTCTaGCAGCCCTACTCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFELGAF*QPYSED
Trigger: ATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTC...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGAGCTGGGGGCCTTCTaGCAGCCCTACTCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSELGAF*QPYSED
Trigger: ATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCATTGCCAGGGATTGTaGGACCAACACAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFHCQGL*DQHRGG
Trigger: CCCGCCCCTGTGTTGGTCCCACAATCCCTGGCAATG...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358215.8
CDS-3UTR CCA 90 bp GTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGCATTGCCAGGGATTGTaGGACCAACACAGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VGRSWGPSGSPTQRMIWLHCQGL*DQHRGG
Trigger: CCCGCCCCTGTGTTGGTCCCACAATCCCTGGCAATG...CAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGGAATTGGGGCAGGCTaGGTACCTCGGATCCATGGG +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSGIGAG*VPRIHG
Trigger: CCCATGGATCCGAGGTACCCAGCCTGCCCCAATTCC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373917.7
CDS-3UTR TCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCAAGCGAGTTCCCTTTTaGGGGCCTCCAATCAGGATC +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPAKRVPF*GPPIRI
Trigger: GATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTT...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTAAGCGAGTTCCCTTTTaGGGGCCTCCAATCAGGATC +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPKRVPF*GPPIRI
Trigger: GATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTT...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTGGCCACAAGCCTGGTaGGTCCTCCAATTGCCCATC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSWPQAW*VLQLPI
Trigger: GATGGGCAATTGGAGGACTCACCAGGCTTGTGGCCA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp GTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGTGGCCACAAGCCTGGTaGGTCCTCCAATTGCCCATC +
Preference number: 4 (lower is better)
Translates to: VGRSWGPSGSPTQRMIWLWPQAW*VLQLPI
Trigger: GATGGGCAATTGGAGGACTCACCAGGCTTGTGGCCA...CAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCGCCAGCCGTTCTGGGTaGGTGTCCTGGTATCGGCTC +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPASRSG*VSWYRL
Trigger: GAGCCGATACCAGGACACTCACCCAGAACGGCTGGC...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGCAGCTTCCCGTCCTTaGAGAGGCTCTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLAASRP*RGSHCP
Trigger: TGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGC...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR TCA 90 bp AAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCCCCGGGGCCACTGGCCGCAGCTTCCCGTCCTTaGAGAGGCTCTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: KKKHACTQRNECSPGPLAAASRP*RGSHCP
Trigger: TGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGC...GGCCAGTGGCCCCGGGGAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCAATCGAGTTCAGGATaGGCACCTCGGCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSQSSSG*APRQGS
Trigger: GGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGATTGAGCACGAAGAATaGCTCGGGGCTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLIEHEE*LGAPSQ
Trigger: CTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCAAT...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCATTGAGCACGAAGAATaGCTCGGGGCTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVIEHEE*LGAPSQ
Trigger: CTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCAAT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGTGCAGAACACACGTGTaGTCCTGCAAAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWCRTHV*SCKVAP
Trigger: TGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCA...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp AGGCTCTCACTGTCCATGCGGGCTCGGGGATCGTTGGGGTTAGGGTCACTGGGGTGCAGAACACACGTGTaGTCCTGCAAAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLSLSMRARGSLGLGSLGCRTHV*SCKVAP
Trigger: TGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCA...CCCCAGTGACCCTAACCCCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCAGGCCATCCACATTaGTCCCCGGCATGTGACGAT +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVPGHPH*SPACDD
Trigger: ATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCCAGGCCATCCACATTaGTCCCCGGCATGTGACGAT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSPGHPH*SPACDD
Trigger: ATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR GCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCCAGGCCATCCACATTaGTCCCCGGCATGTGACGAT +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLPGHPH*SPACDD
Trigger: ATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR GCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTACCCTGGCCTCTCATTaGCAGGGATTGTGGGACCAA +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLTLASH*QGLWDQ
Trigger: TTGGTCCCACAATCCCTGGCAATGAGAGGCCAGGGT...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358215.8
CDS-3UTR CCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGCATTCCAGGGACCTaGGCACAGGCTTCAATATGG +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPACIPGT*AQASIW
Trigger: CCATATTGAAGCCTGTGCCCAGGTCCCTGGAATGCA...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGCGGCTTCTAGGAACTaGGTGAGGGGCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLAASRN*VRGSSG
Trigger: ACCTGATGAGCCCCTCACCCAGTTCCTAGAAGCCGC...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTAGGTTAAACTCCTGCTaGGCGGCTTCTAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPRLNSC*AASRNW
Trigger: CCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCT...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCAGATGCACGTATATCTaGCCCTGCCCTGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVRCTYI*PCPARA
Trigger: AGCCCTGGCAGGGCAGGGCCAGATATACGTGCATCT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCAGATGCACGTATATCTaGCCCTGCCCTGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSRCTYI*PCPARA
Trigger: AGCCCTGGCAGGGCAGGGCCAGATATACGTGCATCT...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTTGGCCAGCCGTTCTaGGTGAGTGTCCTGGTATCG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVLGQPF*VSVLVS
Trigger: CGATACCAGGACACTCACCCAGAACGGCTGGCCAAG...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCTTGGCCAGCCGTTCTaGGTGAGTGTCCTGGTATCG +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSLGQPF*VSVLVS
Trigger: CGATACCAGGACACTCACCCAGAACGGCTGGCCAAG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp TGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGAACAATCGAGTTCAGGGATCCATGGGCCCCCTaGGGTGTGCTTGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: WLVKLRLSSLCGRTIEFRDPWAP*GVLGQP
Trigger: CGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATC...CCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGACCTTGGCGGTCGGGTaGATGTACACATTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLTLAVG*MYTFPR
Trigger: CCGAGGGAATGTGTACATCCACCCGACCGCCAAGGT...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTACCTTGGCGGTCGGGTaGATGTACACATTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFTLAVG*MYTFPR
Trigger: CCGAGGGAATGTGTACATCCACCCGACCGCCAAGGT...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCACCTTGGCGGTCGGGTaGATGTACACATTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVTLAVG*MYTFPR
Trigger: CCGAGGGAATGTGTACATCCACCCGACCGCCAAGGT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTGCAAAGTGGCTCCATaGAGGACGATGCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLCKVAP*RTMLSR
Trigger: CCGGGAGAGCATCGTCCTCCATGGAGCCACTTTGCA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp GTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGTGCAAAGTGGCTCCATaGAGGACGATGCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VGRSWGPSGSPTQRMIWLCKVAP*RTMLSR
Trigger: CCGGGAGAGCATCGTCCTCCATGGAGCCACTTTGCA...CAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp AAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCCCCGGGGCCACTGGCCTGCAAAGTGGCTCCATaGAGGACGATGCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KKKHACTQRNECSPGPLACKVAP*RTMLSR
Trigger: CCGGGAGAGCATCGTCCTCCATGGAGCCACTTTGCA...GGCCAGTGGCCCCGGGGAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTGTGCTCCTGCAAAGTaGCTCCATGGAGGACGATGC +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLCAPAK*LHGGRC
Trigger: GCATCGTCCTCCATGGAGCCACTTTGCAGGAGCACA...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCGAGGTCAAGAATCCTaGTTCAGAGGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLRGQES*FRGLGW
Trigger: CCACCCCAGCCCTCTGAACCAGGATTCTTGACCTCG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373917.7
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCTTCTAGGAACTGGGTaGGGGGCTCATCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSLLGTG*GAHQVG
Trigger: ACCAACCTGATGAGCCCCTCACCCAGTTCCTAGAAG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCAGGAGTAAGAAAGGGTaGCGCTGGCGTCGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPRSKKG*RWRRWA
Trigger: AGCCCACCGACGCCAGCGTCACCCTTTCTTACTCCT...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTAATTGCCCATCCTGCTaGTTACGCTGGAAGACATCC +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPNCPSC*LRWKTS
Trigger: GGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATT...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTCCTGCGGACTTGATCTaGCTCCAGATACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLPADLI*LQIPSV
Trigger: CACTGATGGTATCTGGAGTCAGATCAAGTCCGCAGG...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTGAACCTGCGGACTTaGTCTGACTCCAGATACCAT +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWLNLRT*SDSRYH
Trigger: ATGGTATCTGGAGTCAGATCAAGTCCGCAGGTTCAG...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCTGAACCTGCGGACTTaGTCTGACTCCAGATACCAT +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGLNLRT*SDSRYH
Trigger: ATGGTATCTGGAGTCAGATCAAGTCCGCAGGTTCAG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTCTGGATTCGGAGGATTaGTTGATTGCTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPLDSED*LIADPL
Trigger: CAGAGGGTCAGCAATCAATCAATCCTCCGAATCCAG...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358215.8
CDS-3UTR GCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCCCTTCACTCCAGCTCTaGCGCCCGCTACTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPPSLQL*RPLLQA
Trigger: AGCTTGCAGTAGCGGGCGGCAGAGCTGGAGTGAAGG...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000313597.10
CDS-3UTR GCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTGGAAGGTTAAACTCCTaGTGGGCGGCTTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLGRLNS*WAASRN
Trigger: GTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCC...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCACGTATATCTGGCCCTaGCCTGCCAGGGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSTYIWP*PARAEN
Trigger: GTTTTCAGCCCTGGCAGGGCAGGGCCAGATATACGT...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCAGCCCACGATGCTATaGAGAACACACGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVQPTML*RTHVCS
Trigger: GGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTG...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCTCCCCCAGCCCACGATaGTATGCAGAACACACGTGT +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVSPSPR*YAEHTC
Trigger: ACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGA...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTTCCCCCAGCCCACGATaGTATGCAGAACACACGTGT +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFSPSPR*YAEHTC
Trigger: ACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGA...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTCCCCCAGCCCACGATaGTATGCAGAACACACGTGT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSSPSPR*YAEHTC
Trigger: ACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp TGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGGCGGCTTCTAGGAACTaGGTGAGGGGCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: WGPSGSPTQRMIWLVKLRAASRN*VRGSSG
Trigger: ACCTGATGAGCCCCTCACCCAGTTCCTAGAAGCCGC...CCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCCTGCAGGTACCTGACTaGAAGGTTAAACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPALQVPD*KVKLLL
Trigger: CAGCAGGAGTTTAACCTTCCAGTCAGGTACCTGCAG...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCTGCAGGTACCTGACTaGAAGGTTAAACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGLQVPD*KVKLLL
Trigger: CAGCAGGAGTTTAACCTTCCAGTCAGGTACCTGCAG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCTGTGCTCCTGCAAAGTaGCTCCATGGAGGACGATGC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVCAPAK*LHGGRC
Trigger: GCATCGTCCTCCATGGAGCCACTTTGCAGGAGCACA...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTGTGCTCCTGCAAAGTaGCTCCATGGAGGACGATGC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSCAPAK*LHGGRC
Trigger: GCATCGTCCTCCATGGAGCCACTTTGCAGGAGCACA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGGCTCAGCTCCTTGTGTaGCAGAACAATCGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWAQLLV*QNNRVQ
Trigger: CTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGC...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCGCTCAGCTCCTTGTGTaGCAGAACAATCGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGAQLLV*QNNRVQ
Trigger: CTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGC...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCACTCAGAGGATGATCTaGTTGGTGAAGCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGTQRMI*LVKLRL
Trigger: GAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGT...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCACTCAGAGGATGATCTaGTTGGTGAAGCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: TQESPGHPHCSPACDDPATQRMI*LVKLRL
Trigger: GAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGT...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCCAAAGGTTAGGAATTaGGGCAGGCTGGGTACCTCG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLPKVRN*GRLGTS
Trigger: CGAGGTACCCAGCCTGCCCCAATTCCTAACCTTTGG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373917.7
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCCTGGTTCAGAGGGCTaGGGTGGAAGCCAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSPGSEG*GGSQRL
Trigger: TAACCTTTGGCTTCCACCCCAGCCCTCTGAACCAGG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373917.7
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGCAGAAGAGAGGCCCTaGGGGCAAATATCCCAAACC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSAEERP*GQISQT
Trigger: GGTTTGGGATATTTGCCCCCAGGGCCTCTCTTCTGC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373917.7
CDS-3UTR CCA 90 bp AGGGGAGTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCACCTTGGCGGTCGGGTaGATGTACACATTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: RGVGRSWGPSGSPTQRMITLAVG*MYTFPR
Trigger: TCTAGGGAATGTGTACATCCACCCGACCGCCAAGGT...GATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp GTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGAACAATCGAGTTCAGGATGAGCAGGCCCTCGGATCCATaGGCCCCCTGGGGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VKLRLSSLCGRTIEFRMSRPSDP*APWGVL
Trigger: AAGCACACCCCAGGGGGCCCATGGATCCGAGGGCCT...GCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCAAGCGAGTTCCCTTTTaGGGGCCTCCAATCAGGATC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSKRVPF*GPPIRI
Trigger: GATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTT...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCAAGCGAGTTCCCTTTTaGGGGCCTCCAATCAGGATC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVKRVPF*GPPIRI
Trigger: GATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp GTGCTCCCCCAGCCCACGATGCTATGCAGAACACACGTGTGCTCCTGCAAAGTGCTTCTAGGAACTGGGTaGGGGGCTCATCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: VLPQPTMLCRTHVCSCKVLLGTG*GAHQVG
Trigger: ACCAACCTGATGAGCCCCTCACCCAGTTCCTAGAAG...CACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp CCGGACTCGGCAGCCCAGGATGGTGATAGCAGGCAGCAGCTTCCCGTCCTTGAAAATTGCCCATCCTGCTaGTTACGCTGGAAGACATCC +
Preference number: 4 (lower is better)
Translates to: PDSAAQDGDSRQQLPVLENCPSC*LRWKTS
Trigger: GGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATT...TTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGGCTGCCGAGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCCTGCGGACTTGATCTaGCTCCAGATACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFPADLI*LQIPSV
Trigger: CACTGATGGTATCTGGAGTCAGATCAAGTCCGCAGG...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCCTGCGGACTTGATCTaGCTCCAGATACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSPADLI*LQIPSV
Trigger: CACTGATGGTATCTGGAGTCAGATCAAGTCCGCAGG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGGAAGGTTAAACTCCTaGTGGGCGGCTTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVGRLNS*WAASRN
Trigger: GTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTGGAAGGTTAAACTCCTaGTGGGCGGCTTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFGRLNS*WAASRN
Trigger: GTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCC...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCATTGAGCACGAAGAATaGCTCGGGGCTCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPIEHEE*LGAPSQ
Trigger: CTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCAAT...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTGCTGAAAACACATCCTaGTCTAGGCGGATGGTACCT +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLAENTS*SRRMVP
Trigger: AGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGC...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTGCAGAACACACGTGTaGTCCTGCAAAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSCRTHV*SCKVAP
Trigger: TGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTGCATTCCAGGGACCTaGGCACAGGCTTCAATATGG +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSCIPGT*AQASIW
Trigger: CCATATTGAAGCCTGTGCCCAGGTCCCTGGAATGCA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCTGCATTCCAGGGACCTaGGCACAGGCTTCAATATGG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVCIPGT*AQASIW
Trigger: CCATATTGAAGCCTGTGCCCAGGTCCCTGGAATGCA...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GCTCCCCCAGCCCACGATGCTATGCAGAACACACGTGTGCTCCTGCAAAGTGGCTGCATTCCAGGGACCTaGGCACAGGCTTCAATATGG +
Preference number: 4 (lower is better)
Translates to: APPAHDAMQNTRVLLQSGCIPGT*AQASIW
Trigger: CCATATTGAAGCCTGTGCCCAGGTCCCTGGAATGCA...GCCACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCGCGGCTTCTAGGAACTaGGTGAGGGGCTCATCAGGT +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPAASRN*VRGSSG
Trigger: ACCTGATGAGCCCCTCACCCAGTTCCTAGAAGCCGC...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTAGGTTAAACTCCTGCTaGGCGGCTTCTAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFRLNSC*AASRNW
Trigger: CCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCT...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCAGGTTAAACTCCTGCTaGGCGGCTTCTAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVRLNSC*AASRNW
Trigger: CCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp AGGGGAGTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTACCTCGTGTGTCTGTaGATTCTCAACGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: RGVGRSWGPSGSPTQRMIYLVCL*ILNDAA
Trigger: GGCTGCATCGTTGAGAATCCACAGACACACGAGGTA...GATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCAGATGCACGTATATCTaGCCCTGCCCTGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPRCTYI*PCPARA
Trigger: AGCCCTGGCAGGGCAGGGCCAGATATACGTGCATCT...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCAGATGCACGTATATCTaGCCCTGCCCTGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPRCTYI*PCPARA
Trigger: AGCCCTGGCAGGGCAGGGCCAGATATACGTGCATCT...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCTGCAAAGTGGCTCCATaGAGGACGATGCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPCKVAP*RTMLSR
Trigger: CCGGGAGAGCATCGTCCTCCATGGAGCCACTTTGCA...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGGGGAGTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCGCTCAGCTCCTTGTGTaGCAGAACAATCGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: RGVGRSWGPSGSPTQRMIAQLLV*QNNRVQ
Trigger: CTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGC...GATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCACTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTACTCAGAGGATGATCTaGTTGGTGAAGCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLTQRMI*LVKLRL
Trigger: GAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGT...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGACCTTGGCGGTCGGGTaGATGTACACATTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLTLAVG*MYTFPR
Trigger: TCTAGGGAATGTGTACATCCACCCGACCGCCAAGGT...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373917.7
3UTR CAA 72 bp GGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTaGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GPSGSPTQRMIW*VKLRLSSLCGR
Trigger: TCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443704.5
ENST00000622191.1
CDS-3UTR TCA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCAAAAGACAAAGGTCTaGAGCGAGTTCCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: QESPGHPHCSPACDDPAWQKTKV*SEFPFE
Trigger: CTCAAAAGGGAACTCGCTTCAGACCTTTGTCTTTTG...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCAATTGCCCATCCTGCTaGTTACGCTGGAAGACATCC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVNCPSC*LRWKTS
Trigger: GGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCAATTGCCCATCCTGCTaGTTACGCTGGAAGACATCC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSNCPSC*LRWKTS
Trigger: GGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATT...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp AGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCCTGCGGACTTGATCTaGCTCCAGATACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: RSWGPSGSPTQRMIWLVKPADLI*LQIPSV
Trigger: CACTGATGGTATCTGGAGTCAGATCAAGTCCGCAGG...CTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTGAACCTGCGGACTTaGTCTGACTCCAGATACCAT +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFLNLRT*SDSRYH
Trigger: ATGGTATCTGGAGTCAGATCAAGTCCGCAGGTTCAG...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCTGAACCTGCGGACTTaGTCTGACTCCAGATACCAT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSLNLRT*SDSRYH
Trigger: ATGGTATCTGGAGTCAGATCAAGTCCGCAGGTTCAG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp TGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGCAGCTTCCCGTCCTTaGAGAGGCTCTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: WQPYSEDDLVGEASAQLLAASRP*RGSHCP
Trigger: TGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGC...AAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTGAACCCCACAACTaGCTCTGTCCAATAAACCCT +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLSEPHN*LCPINP
Trigger: AGGGTTTATTGGACAGAGTCAGTTGTGGGGTTCAGA...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358215.8
CDS-3UTR TCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGGATTGATTGATTGCTaGCCCTCTGAACCCCACAAC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVGLIDC*PSEPHN
Trigger: GTTGTGGGGTTCAGAGGGTCAGCAATCAATCAATCC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358215.8
ENST00000443704.5
CDS-3UTR TCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGATCCCAAACCGAATTTaGTCAGGAAGGGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLIPNRI*SGRGRD
Trigger: ATCCCTGCCCCTTCCTGATCAAATTCGGTTTGGGAT...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373917.7
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGCTGAAAACACATCCTaGTCTAGGCGGATGGTACCT +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSAENTS*SRRMVP
Trigger: AGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGCTGAAAACACATCCTaGTCTAGGCGGATGGTACCT +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVAENTS*SRRMVP
Trigger: AGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCACGTATATCTGGCCCTaGCCTGCCAGGGCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPTYIWP*PARAEN
Trigger: GTTTTCAGCCCTGGCAGGGCAGGGCCAGATATACGT...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CCGGACTCGGCAGCCCAGGATGGTGATAGCAGGCAGCAGCTTCCCGTCCTTGAAATACCATCAGTGAGATaGACGTATATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PDSAAQDGDSRQQLPVLEIPSVR*TYIWPC
Trigger: GCAGGGCCAGATATACGTGCATCTCACTGATGGTAT...TTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGGCTGCCGAGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCCAGCCCACGATGCTATaGAGAACACACGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPQPTML*RTHVCS
Trigger: GGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTG...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp GGTAACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCCCCAGCGTCCCACGGTaGTCCCCCAGCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: GNCLLKEETRVHTEERMLPSVPR*SPSPRC
Trigger: GCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGG...GAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTGCTTCAATATGGTGTTaGATCATAGGGACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFASIWC*IIGTPA
Trigger: GGCAGGGGTCCCTATGATCCAACACCATATTGAAGC...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGCTTCAATATGGTGTTaGATCATAGGGACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLASIWC*IIGTPA
Trigger: GGCAGGGGTCCCTATGATCCAACACCATATTGAAGC...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTGCAGGTACCTGACTaGAAGGTTAAACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFLQVPD*KVKLLL
Trigger: CAGCAGGAGTTTAACCTTCCAGTCAGGTACCTGCAG...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCTGCAGGTACCTGACTaGAAGGTTAAACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSLQVPD*KVKLLL
Trigger: CAGCAGGAGTTTAACCTTCCAGTCAGGTACCTGCAG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTACCTCGTGTGTCTGTaGATTCTCAACGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLYLVCL*ILNDAA
Trigger: GGCTGCATCGTTGAGAATCCACAGACACACGAGGTA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTACCTCGTGTGTCTGTaGATTCTCAACGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSYLVCL*ILNDAA
Trigger: GGCTGCATCGTTGAGAATCCACAGACACACGAGGTA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGCTCAGCTCCTTGTGTaGCAGAACAATCGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVAQLLV*QNNRVQ
Trigger: CTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGACTCAGAGGATGATCTaGTTGGTGAAGCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLTQRMI*LVKLRL
Trigger: GAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGT...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCTGTCCAATAAACCCTaGCCTCTCATTGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLLSNKP*PLIARD
Trigger: ATCCCTGGCAATGAGAGGCCAGGGTTTATTGGACAG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358215.8
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCTTCAGAGGGCTGGGGTaGAAGCCAAAGGTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVFRGLG*KPKVRN
Trigger: ATTCCTAACCTTTGGCTTCCACCCCAGCCCTCTGAA...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373917.7
CDS-3UTR TCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCAAGCGAGTTCCCTTTTaGGGGCCTCCAATCAGGATC +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPKRVPF*GPPIRI
Trigger: GATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTT...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTCAAAAGACAAAGGTCTaGAGCGAGTTCCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLQKTKV*SEFPFE
Trigger: CTCAAAAGGGAACTCGCTTCAGACCTTTGTCTTTTG...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTCCAGATACCATCAGTaGGATGCACGTATATCTGGC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSSRYHQ*DARISG
Trigger: GCCAGATATACGTGCATCTCACTGATGGTATCTGGA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCTCCAGATACCATCAGTaGGATGCACGTATATCTGGC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVSRYHQ*DARISG
Trigger: GCCAGATATACGTGCATCTCACTGATGGTATCTGGA...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR TCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTCCAGATACCATCAGTaGGATGCACGTATATCTGGC +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLSRYHQ*DARISG
Trigger: GCCAGATATACGTGCATCTCACTGATGGTATCTGGA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR TCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCCCTGCGGACTTGATCTaGCTCCAGATACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPPADLI*LQIPSV
Trigger: CACTGATGGTATCTGGAGTCAGATCAAGTCCGCAGG...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp TGTGGCAGAACAATCGAGTTCAGGATGAGCACCTCGGCAGGGATCCGGACTCGGCTGGATTCGGAGGATTaGTTGATTGCTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: CGRTIEFRMSTSAGIRTRLDSED*LIADPL
Trigger: CAGAGGGTCAGCAATCAATCAATCCTCCGAATCCAG...CCGAGTCCGGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCGCTACCTCTGTATGTTaGACCCCAAATCAAAAGACA +
Preference number: 4 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGATSVC*TPNQKT
Trigger: TGTCTTTTGATTTGGGGTTCAACATACAGAGGTAGC...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358215.8
CDS-3UTR GCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTGAGCATAATGGTGACTaGTACCTAAACACTAGCTCC +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLEHNGD*YLNTSS
Trigger: GGAGCTAGTGTTTAGGTAGCAGTCACCATTATGCTC...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313597.10
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGATCATAGGGACCCCTaGCACAGGAAACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVDHRDP*HRKQWF
Trigger: AAACCATTGTTTCCTGTGGCAGGGGTCCCTATGATC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGATACCATCAGTGAGATaGACGTATATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLIPSVR*TYIWPC
Trigger: GCAGGGCCAGATATACGTGCATCTCACTGATGGTAT...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCATACCATCAGTGAGATaGACGTATATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVIPSVR*TYIWPC
Trigger: GCAGGGCCAGATATACGTGCATCTCACTGATGGTAT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCATACCATCAGTGAGATaGACGTATATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSIPSVR*TYIWPC
Trigger: GCAGGGCCAGATATACGTGCATCTCACTGATGGTAT...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR GCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCTGCAGAACACACGTGTaGTCCTGCAAAGTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPCRTHV*SCKVAP
Trigger: TGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCA...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCACCCTGGCCTCTCATTaGCAGGGATTGTGGGACCAA +
Preference number: 4 (lower is better)
Translates to: PTQRMIWLVKLRLSSLCGTLASH*QGLWDQ
Trigger: TTGGTCCCACAATCCCTGGCAATGAGAGGCCAGGGT...GCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp AAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCCCCGGGGCCACTGGCCAAGAAGAAACACGCGTaGACACAGAGGAACGAATGC +
Preference number: 4 (lower is better)
Translates to: KKKHACTQRNECSPGPLAKKKHA*TQRNEC
Trigger: GCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTT...GGCCAGTGGCCCCGGGGAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR GCA 90 bp AACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCCCCCCTCCTGCCCATCTGTaGCCCTGGTCTCATGCCCCC +
Preference number: 4 (lower is better)
Translates to: NCLLKEETRVHTEERMLPPPAHL*PWSHAP
Trigger: GGGGGCATGAGACCAGGGGCACAGATGGGCAGGAGG...GGGGAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CCA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTGCCACAGGAAACAATaGTTTGGGCACCTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLCHRKQ*FGHLKR
Trigger: TCTTTTGAGGTGCCCAAACCATTGTTTCCTGTGGCA...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCTGCATTCCAGGGACCTaGGCACAGGCTTCAATATGG +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPCIPGT*AQASIW
Trigger: CCATATTGAAGCCTGTGCCCAGGTCCCTGGAATGCA...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGAACACTTGGCCAGCCGTTCTaGGTGAGTGTCCTGGTATCG +
Preference number: 4 (lower is better)
Translates to: QRMIWLVKLRLSSLCGRTLGQPF*VSVLVS
Trigger: CGATACCAGGACACTCACCCAGAACGGCTGGCCAAG...TGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp AACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCCCCTCCCGATGGAGACGTTaGGGCCCAGCACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: NCLLKEETRVHTEERMLPSRWRR*GPAQPR
Trigger: CCTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGA...GGGGAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR TCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCAAAAGACAAAGGTCTaGAGCGAGTTCCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFQKTKV*SEFPFE
Trigger: CTCAAAAGGGAACTCGCTTCAGACCTTTGTCTTTTG...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCAAAAGACAAAGGTCTaGAGCGAGTTCCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLQKTKV*SEFPFE
Trigger: CTCAAAAGGGAACTCGCTTCAGACCTTTGTCTTTTG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR TCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCAATTGCCCATCCTGCTaGTTACGCTGGAAGACATCC +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPNCPSC*LRWKTS
Trigger: GGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATT...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp AGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGTCCAGATACCATCAGTaGGATGCACGTATATCTGGC +
Preference number: 4 (lower is better)
Translates to: RSWGPSGSPTQRMIWLVKSRYHQ*DARISG
Trigger: GCCAGATATACGTGCATCTCACTGATGGTATCTGGA...CTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp GTGCTCCCCCAGCCCACGATGCTATGCAGAACACACGTGTGCTCCTGCAAAGTGTCTGAACCCCACAACTaGCTCTGTCCAATAAACCCT +
Preference number: 4 (lower is better)
Translates to: VLPQPTMLCRTHVCSCKVSEPHN*LCPINP
Trigger: AGGGTTTATTGGACAGAGTCAGTTGTGGGGTTCAGA...CACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp GGTAACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCGTCTCATGCCCCCGGTaGCTCACACAGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GNCLLKEETRVHTEERMLVSCPR*LTQGLA
Trigger: TGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGAC...GAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR GCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGAGCATAATGGTGACTaGTACCTAAACACTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVEHNGD*YLNTSS
Trigger: GGAGCTAGTGTTTAGGTAGCAGTCACCATTATGCTC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313597.10
ENST00000373917.7
CDS-3UTR GCA 90 bp TGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGGAAGGTTAAACTCCTaGTGGGCGGCTTCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: WQPYSEDDLVGEASAQLLGRLNS*WAASRN
Trigger: GTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCC...AAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCGCTGAAAACACATCCTaGTCTAGGCGGATGGTACCT +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPAENTS*SRRMVP
Trigger: AGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGC...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp CAGCCCACGATGCTATGCAGAACACACGTGTGCTCCTGCAAAGTGGCTCCATGGGCTGAAAACACATCCTaGTCTAGGCGGATGGTACCT +
Preference number: 4 (lower is better)
Translates to: QPTMLCRTHVCSCKVAPWAENTS*SRRMVP
Trigger: AGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGC...CCATGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGAACATCCCCCAGCCCACGATaGTATGCAGAACACACGTGT +
Preference number: 4 (lower is better)
Translates to: QRMIWLVKLRLSSLCGRTSPSPR*YAEHTC
Trigger: ACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGA...TGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp CCGGACTCGGCAGCCCAGGATGGTGATAGCAGGCAGCAGCTTCCCGTCCTTGAACAGGAAACAATGGTTTaGGCACCTCAAAAGACAAAG +
Preference number: 4 (lower is better)
Translates to: PDSAAQDGDSRQQLPVLEQETMV*APQKTK
Trigger: CTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTG...TTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGGCTGCCGAGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTGCCACAGGAAACAATaGTTTGGGCACCTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSCHRKQ*FGHLKR
Trigger: TCTTTTGAGGTGCCCAAACCATTGTTTCCTGTGGCA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTTGCCACAGGAAACAATaGTTTGGGCACCTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFCHRKQ*FGHLKR
Trigger: TCTTTTGAGGTGCCCAAACCATTGTTTCCTGTGGCA...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTGCCACAGGAAACAATaGTTTGGGCACCTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLCHRKQ*FGHLKR
Trigger: TCTTTTGAGGTGCCCAAACCATTGTTTCCTGTGGCA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp GTGGGTAGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGTGCCACAGGAAACAATaGTTTGGGCACCTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: VGRSWGPSGSPTQRMIWLCHRKQ*FGHLKR
Trigger: TCTTTTGAGGTGCCCAAACCATTGTTTCCTGTGGCA...CAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCTACCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCGCTTCAATATGGTGTTaGATCATAGGGACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPASIWC*IIGTPA
Trigger: GGCAGGGGTCCCTATGATCCAACACCATATTGAAGC...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp AGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCTGCAGGTACCTGACTaGAAGGTTAAACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SWGPSGSPTQRMIWLVKLLQVPD*KVKLLL
Trigger: CAGCAGGAGTTTAACCTTCCAGTCAGGTACCTGCAG...AAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCTACCTCGTGTGTCTGTaGATTCTCAACGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPYLVCL*ILNDAA
Trigger: GGCTGCATCGTTGAGAATCCACAGACACACGAGGTA...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCTACCTCGTGTGTCTGTaGATTCTCAACGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPYLVCL*ILNDAA
Trigger: GGCTGCATCGTTGAGAATCCACAGACACACGAGGTA...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR TCA 90 bp AGGAGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCAAAAGACAAAGGTCTaGAGCGAGTTCCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RSWGPSGSPTQRMIWLVKQKTKV*SEFPFE
Trigger: CTCAAAAGGGAACTCGCTTCAGACCTTTGTCTTTTG...CTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp CCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCCTGAACCTGCGGACTTaGTCTGACTCCAGATACCAT +
Preference number: 4 (lower is better)
Translates to: PTQRMIWLVKLRLSSLCGLNLRT*SDSRYH
Trigger: ATGGTATCTGGAGTCAGATCAAGTCCGCAGGTTCAG...GCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR TCA 90 bp CAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGGGATTGATTGATTGCTaGCCCTCTGAACCCCACAAC +
Preference number: 4 (lower is better)
Translates to: QPYSEDDLVGEASAQLLVGLIDC*PSEPHN
Trigger: GTTGTGGGGTTCAGAGGGTCAGCAATCAATCAATCC...CACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCATACCATCAGTGAGATaGACGTATATCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QGSRGLLGSREGENPGVPIPSVR*TYIWPC
Trigger: GCAGGGCCAGATATACGTGCATCTCACTGATGGTAT...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CCA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCAGGAAACAATGGTTTaGGCACCTCAAAAGACAAAG +
Preference number: 4 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLQETMV*APQKTK
Trigger: CTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CCA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCAGGAAACAATGGTTTaGGCACCTCAAAAGACAAAG +
Preference number: 4 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVQETMV*APQKTK
Trigger: CTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTG...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCAGGAAACAATGGTTTaGGCACCTCAAAAGACAAAG +
Preference number: 4 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSQETMV*APQKTK
Trigger: CTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CCA 90 bp TGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGCTTCAATATGGTGTTaGATCATAGGGACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: WQPYSEDDLVGEASAQLLASIWC*IIGTPA
Trigger: GGCAGGGGTCCCTATGATCCAACACCATATTGAAGC...AAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp GGTAACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCTCACCCCCTTCCCGATaGAGACGTTGGGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GNCLLKEETRVHTEERMLSPPSR*RRWGPA
Trigger: TGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGA...GAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CCA 90 bp CCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCACTCAGAGGATGATCTaGTTGGTGAAGCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: PTQRMIWLVKLRLSSLCGTQRMI*LVKLRL
Trigger: GAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGT...GCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CCA 90 bp TGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTCTGTCCAATAAACCCTaGCCTCTCATTGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: WQPYSEDDLVGEASAQLLLSNKP*PLIARD
Trigger: ATCCCTGGCAATGAGAGGCCAGGGTTTATTGGACAG...AAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
3UTR CAA 72 bp AGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTaGTGTGGCAGAACAATCGAGTTCAGGATGAGCACC +
Preference number: 4 (lower is better)
Translates to: RMIWLVKLRLSS*CGRTIEFRMST
Trigger: GGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp CTTGGTAACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGGGCTCTCACTGTCCATaGGGGCTCGGGGATCGTTGG +
Preference number: 4 (lower is better)
Translates to: LGNCLLKEETRVHTEERMGSHCP*GLGDRW
Trigger: CCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCC...CATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTTACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR TCA 90 bp AGCTGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTGCTACCTCTGTATGTTaGACCCCAAATCAAAAGACA +
Preference number: 4 (lower is better)
Translates to: SWGPSGSPTQRMIWLVKLATSVC*TPNQKT
Trigger: TGTCTTTTGATTTGGGGTTCAACATACAGAGGTAGC...AAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR GCA 90 bp AACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCCCCTCCCCCAGCCCACGATaGTATGCAGAACACACGTGT +
Preference number: 4 (lower is better)
Translates to: NCLLKEETRVHTEERMLPSPSPR*YAEHTC
Trigger: ACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGA...GGGGAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CCA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCAGGAAACAATGGTTTaGGCACCTCAAAAGACAAAG +
Preference number: 4 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPQETMV*APQKTK
Trigger: CTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTG...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR GCA 90 bp GGTAACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCCAGCCCACGATGCTATaGAGAACACACGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GNCLLKEETRVHTEERMLQPTML*RTHVCS
Trigger: GGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTG...GAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CCA 90 bp CTTGGTAACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGTGTGCTCCTGCAAAGTaGCTCCATGGAGGACGATGC +
Preference number: 4 (lower is better)
Translates to: LGNCLLKEETRVHTEERMCAPAK*LHGGRC
Trigger: GCATCGTCCTCCATGGAGCCACTTTGCAGGAGCACA...CATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTTACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS CCA 90 bp GGGCACCCTCCATCCATCCGACCACCACCCTTCCCTCCCTGGGGCTaGGACCAGTGCTCACCACAGCCGAGGGGGCCACCTTGGCGGTCG +
Preference number: 5 (lower is better)
Translates to: GHPPSIRPPPFPPWG*DQCSPQPRGPPWRS
Trigger: CGACCGCCAAGGTGGCCCCCTCGGCTGTGGTGAGCACTGGTCCCAGCCCCAGGGAGGGAAGGGTGGTGGTCGGATGGATGGAGGGTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 90 bp CAGCGTGGGCACCCTCCATCCATCCGACCACCACCCTTCCCTCCCTaGGGCTGGGACCAGTGCTCACCACAGCCGAGGGGGCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: QRGHPPSIRPPPFPP*GWDQCSPQPRGPPW
Trigger: CCAAGGTGGCCCCCTCGGCTGTGGTGAGCACTGGTCCCAGCCCCAGGGAGGGAAGGGTGGTGGTCGGATGGATGGAGGGTGCCCACGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS-3UTR CAA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCGCCGAGGGGGCCACCTaGGCGGTCGGGTGGATGTAC +
Preference number: 5 (lower is better)
Translates to: TQESPGHPHCSPACDDPAAEGAT*AVGWMY
Trigger: GTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGC...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CCCATCTGTGCCCCTGGTCTCATGCCCCCGGTGACTCACACAGGGCCTGGCACACGGGCTCGGGGATCGTaGGGGTTAGGGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: PICAPGLMPPVTHTGPGTRARGS*GLGSLG
Trigger: CCCCAGTGACCCTAACCCCAACGATCCCCGAGCCCG...TGTGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGACCAGGGGCACAGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CAA 90 bp CCCATCTGTGCCCCTGGTCTCATGCCCCCGGTGACTCACACAGGGCCTGGCACATTCCCGATGGAGACGTaGGGGCCCAGCACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: PICAPGLMPPVTHTGPGTFPMET*GPSTAE
Trigger: CTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGAA...TGTGCCAGGCCCTGTGTGAGTCACCGGGGGCATGAGACCAGGGGCACAGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS-3UTR CAA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTCGGGCTCGGGGATCGTaGGGGTTAGGGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPRARGS*GLGSLG
Trigger: CCCCAGTGACCCTAACCCCAACGATCCCCGAGCCCG...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS GCA 90 bp CGAGTTCAGGATGAGCACCTCGGCAGGGATCCGGACTCGGCAGCCTaGAGCATGGATGAGGGCACCAGGGGAGGTCATGGGAGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: RVQDEHLGRDPDSAA*SMDEGTRGGHGRGD
Trigger: GTCTCCCCTCCCATGACCTCCCCTGGTGCCCTCATCCATGCTGCAGGCTGCCGAGTCCGGATCCCTGCCGAGGTGCTCATCCTGAACTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481170.1
CDS CCA 90 bp GGGCAGGCTGGGTACCTCGGATCCATGGGCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAGTGTCCTGGTATCGGCTCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: GQAGYLGSMGPLGCA*PAVLGECPGIGSGR
Trigger: TCTACCTGAGCCGATACCAGGACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGTACCCAGCCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373917.7
ENST00000481170.1
ENST00000682340.1
ENST00000683106.1
ENST00000683382.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 90 bp GGCCCTGCCCTGCCAGGGCTGAAAACACATCCTGCTCTAGGCGGATaGTACCTGCCCCTGGCCACAAGCCTGGTGAGTCCTCCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GPALPGLKTHPALGG*YLPLATSLVSPPWQ
Trigger: CTGCCAGGGAGGACTCACCAGGCTTGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGCCCTGGCAGGGCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000481170.1
ENST00000682340.1
ENST00000683382.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684242.1
ENST00000684334.1
CDS CCA 90 bp GCCGCACACCCTCACCCACGGTCACCCCCTTCCCGATGGAGACGTTaGGGCCCAGCTGTGGAGAGAAGCACACACCATAAGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: AAHPHPRSPPSRWRR*GPAVERSTHHKPWR
Trigger: CCTCCAGGGCTTATGGTGTGTGCTTCTCTCCACAGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGGTGAGGGTGTGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
CDS-3UTR CAA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTGCCGAGGGGGCCACCTaGGCGGTCGGGTGGATGTAC +
Preference number: 5 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFAEGAT*AVGWMY
Trigger: GTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGC...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGCCGAGGGGGCCACCTaGGCGGTCGGGTGGATGTAC +
Preference number: 5 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSAEGAT*AVGWMY
Trigger: GTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTCCCGATGGAGACGTaGGGGCCCAGCACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGFPMET*GPSTAE
Trigger: CTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGAA...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS CCA 90 bp ACGTTGGGGCCCAGCACAGCCGAGGGGGCCACCTTGGCGGTCGGGTaGATGTACACATTCCCTAGAAGCAGAAGAGAGGCCCTCGGATCC +
Preference number: 5 (lower is better)
Translates to: TLGPSTAEGATLAVG*MYTFPRSRREALGS
Trigger: GGATCCGAGGGCCTCTCTTCTGCTTCTAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGCTGGGCCCCAACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000443704.5
ENST00000682435.1
ENST00000683241.1
ENST00000683691.1
ENST00000684227.1
ENST00000684562.1
ENST00000684729.1
CDS CCA 90 bp GGACCAGTGCTCACCACAGCCGAGGGGGCCACCTTGGCGGTCGGGTaGATGTACACATTCCCTAGAAGCAGAAGAGAGGCCCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: GPVLTTAEGATLAVG*MYTFPRSRREALGA
Trigger: TGCCCCCAGGGCCTCTCTTCTGCTTCTAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGGTGAGCACTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 90 bp CCCTGGGGCTGGGACCAGTGCTCACCACAGCCGAGGGGGCCACCTTaGCGGTCGGGTGGATGTACACATTCCCTAGAAGCAGAAGAGAGG +
Preference number: 5 (lower is better)
Translates to: PWGWDQCSPQPRGPP*RSGGCTHSLEAEER
Trigger: CCTCTCTTCTGCTTCTAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGGTGAGCACTGGTCCCAGCCCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 90 bp TCTCCCGGAGCCGCACACCCTCACCCACGGTCACCCCCTTCCCGATaGAGACGTTGGGGCCCAGCTGTGGAGAGAAGCACACACCATAAG +
Preference number: 5 (lower is better)
Translates to: SPGAAHPHPRSPPSR*RRWGPAVERSTHHK
Trigger: CTTATGGTGTGTGCTTCTCTCCACAGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGGTGAGGGTGTGCGGCTCCGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
CDS-3UTR CAA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCGGGCTCGGGGATCGTaGGGGTTAGGGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLRARGS*GLGSLG
Trigger: CCCCAGTGACCCTAACCCCAACGATCCCCGAGCCCG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CAA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCGGGCTCGGGGATCGTaGGGGTTAGGGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSRARGS*GLGSLG
Trigger: CCCCAGTGACCCTAACCCCAACGATCCCCGAGCCCG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS CCA 90 bp GGCCCTGCCCTGCCAGGGCTGAAAACACATCCTGCTCTAGGCGGATaGTACCTGCCCCTGGCCACAAGCCTGGTGAGTCCTCCAATTGCC +
Preference number: 5 (lower is better)
Translates to: GPALPGLKTHPALGG*YLPLATSLVSPPIA
Trigger: GGCAATTGGAGGACTCACCAGGCTTGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGCCCTGGCAGGGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000622191.2
ENST00000682102.1
ENST00000683241.1
ENST00000683386.1
ENST00000683691.1
ENST00000683752.1
ENST00000683946.1
ENST00000684412.1
ENST00000684706.1
CDS CCA 90 bp GTTAGGAATTGGGGCAGGCTGGGTACCTCGGATCCATGGGCCCCCTaGGGTGTGCTTGGCCAGCCGTTCTGGGTGAGTGTCCTGGTATCG +
Preference number: 5 (lower is better)
Translates to: VRNWGRLGTSDPWAP*GVLGQPFWVSVLVS
Trigger: CGATACCAGGACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGTACCCAGCCTGCCCCAATTCCTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373917.7
ENST00000481170.1
ENST00000682340.1
ENST00000683106.1
ENST00000683382.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 90 bp AGCAGAAGAGAGGCCCTCGGATCCATGGGCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAGTGTCCTGGTATCGGCTCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: SRREALGSMGPLGCA*PAVLGECPGIGSGR
Trigger: TCTACCTGAGCCGATACCAGGACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGGCCTCTCTTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000443704.5
ENST00000682435.1
ENST00000683241.1
ENST00000683691.1
ENST00000684227.1
ENST00000684562.1
ENST00000684729.1
CDS CCA 90 bp GGCGGATGGTACCTGCCCCTGGCCACAAGCCTGGTGAGTCCTCCCTaGCAGAGAGGAAGAATGCTGACATTAGTCCCCCAGCTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: GGWYLPLATSLVSPP*QRGRMLTLVPQLSP
Trigger: GGGGCTCAGCTGGGGGACTAATGTCAGCATTCTTCCTCTCTGCCAGGGAGGACTCACCAGGCTTGTGGCCAGGGGCAGGTACCATCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000481170.1
ENST00000682340.1
ENST00000683382.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684242.1
ENST00000684334.1
CDS CCA 90 bp GGCCCTGCCCTGCCAGGGCTGAAAACACATCCTGCTCTAGGCGGATaGTACCTGCCCCTGGCCACAAGCCTGGTGAGTCCTCCCTCACAA +
Preference number: 5 (lower is better)
Translates to: GPALPGLKTHPALGG*YLPLATSLVSPPSQ
Trigger: TTGTGAGGGAGGACTCACCAGGCTTGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGCCCTGGCAGGGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000496536.2
ENST00000683402.1
ENST00000684274.1
CDS-3UTR CAA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCGCCGAGGGGGCCACCTaGGCGGTCGGGTGGATGTAC +
Preference number: 5 (lower is better)
Translates to: QGSRGLLGSREGENPGVPAEGAT*AVGWMY
Trigger: GTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGC...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCTTCCCGATGGAGACGTaGGGGCCCAGCACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSFPMET*GPSTAE
Trigger: CTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGAA...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTTCCCGATGGAGACGTaGGGGCCCAGCACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLFPMET*GPSTAE
Trigger: CTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGAA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CAA 90 bp TGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCGGGCTCGGGGATCGTaGGGGTTAGGGTCACTGGGG +
Preference number: 5 (lower is better)
Translates to: WGPSGSPTQRMIWLVKLRRARGS*GLGSLG
Trigger: CCCCAGTGACCCTAACCCCAACGATCCCCGAGCCCG...CCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS CCA 90 bp ACCCACGGTCACCCCCTTCCCGATGGAGACGTTGGGGCCCAGCTGTaGAGAGAAGCACACACCATAAGCCCTGGAGGGACTTGGAGGATC +
Preference number: 5 (lower is better)
Translates to: THGHPLPDGDVGAQL*REAHTISPGGTWRI
Trigger: GATCCTCCAAGTCCCTCCAGGGCTTATGGTGTGTGCTTCTCTCCACAGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
CDS CCA 90 bp GACAGGGCATGCAATGGAGGGAGAGGAAGAGCCCCAGTGGGGGCGTaGAAGGGAGCAGGAAGATGTGCTGGGCGTCAATGGGAGCGAATG +
Preference number: 5 (lower is better)
Translates to: DRACNGGRGRAPVGA*KGAGRCAGRQWERM
Trigger: CATTCGCTCCCATTGACGCCCAGCACATCTTCCTGCTCCCTTCCACGCCCCCACTGGGGCTCTTCCTCTCCCTCCATTGCATGCCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS GCA 90 bp TGCACGTATATCTGGCCCTGCCCTGCCAGGGCTGAAAACACATCCTaGTCTAGGCGGATGGTACCTGCCCCTGGCCACAAGCCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: CTYIWPCPARAENTS*SRRMVPAPGHKPGE
Trigger: CTCACCAGGCTTGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGCCCTGGCAGGGCAGGGCCAGATATACGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 40 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000481170.1
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682102.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683241.1
ENST00000683382.1
ENST00000683386.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683691.1
ENST00000683746.1
ENST00000683752.1
ENST00000683864.1
ENST00000683946.1
ENST00000684227.1
ENST00000684242.1
ENST00000684274.1
ENST00000684334.1
ENST00000684412.1
ENST00000684562.1
ENST00000684706.1
ENST00000684729.1
CDS CCA 90 bp GGATGTACACATTCCCTCGGATCCATGGGCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAGTGTCCTGGTATCGGCTCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: GCTHSLGSMGPLGCA*PAVLGECPGIGSGR
Trigger: TCTACCTGAGCCGATACCAGGACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGGAATGTGTACATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000455657.6
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682443.1
ENST00000682481.1
ENST00000683131.1
ENST00000683386.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683626.1
ENST00000683746.1
ENST00000683752.1
ENST00000683864.1
ENST00000683946.1
ENST00000684274.1
ENST00000684706.1
CDS-3UTR CAA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGAGGGGCTCATCAGGTaGGTAGAAGCCAATGAGCAG +
Preference number: 5 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPEGLIR*VEANEQ
Trigger: CTGCTCATTGGCTTCTACCAACCTGATGAGCCCCTC...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCGAGGGGCTCATCAGGTaGGTAGAAGCCAATGAGCAG +
Preference number: 5 (lower is better)
Translates to: TQESPGHPHCSPACDDPAEGLIR*VEANEQ
Trigger: CTGCTCATTGGCTTCTACCAACCTGATGAGCCCCTC...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGGAGGGGCTCATCAGGTaGGTAGAAGCCAATGAGCAG +
Preference number: 5 (lower is better)
Translates to: QESPGHPHCSPACDDPAWEGLIR*VEANEQ
Trigger: CTGCTCATTGGCTTCTACCAACCTGATGAGCCCCTC...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGCCGTAGTTGAGGGATaGCGTCCTGTTAGCCGTAGT +
Preference number: 5 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPAVVEG*RPVSRS
Trigger: ACTACGGCTAACAGGACGCAATCCCTCAACTACGGC...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGAACAGCCGAGGGGGCCACCTaGGCGGTCGGGTGGATGTAC +
Preference number: 5 (lower is better)
Translates to: QRMIWLVKLRLSSLCGRTAEGAT*AVGWMY
Trigger: GTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGC...TGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp CAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTCGGCTCAGCTCCTaGTGTGGCAGAACAATCGAG +
Preference number: 5 (lower is better)
Translates to: QESPGHPHCSPACDDPAWLRLSS*CGRTIE
Trigger: CTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAG...CCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTCAGAGGATGATCTGGTaGGTGAAGCTTCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPQRMIW*VKLRLS
Trigger: GCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTG...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCCAGAGGATGATCTGGTaGGTGAAGCTTCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGQRMIW*VKLRLS
Trigger: GCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTG...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS TCA 90 bp AGGGACCCGAGAGCCAGCTCAGTGGATCTTAGGAAACAGATACCATaGGCCAGGGCACCTGACCGCCACCGCTTGCTCCCAGGACTACTC +
Preference number: 5 (lower is better)
Translates to: RDPRASSVDLRKQIP*ARAPDRHRLLPGLL
Trigger: GAGTAGTCCTGGGAGCAAGCGGTGGCGGTCAGGTGCCCTGGCTCATGGTATCTGTTTCCTAAGATCCACTGAGCTGGCTCTCGGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000682340.1
ENST00000682443.1
ENST00000683106.1
ENST00000683241.1
ENST00000684274.1
ENST00000684412.1
ENST00000684562.1
CDS TCA 90 bp AGCTTCGGCTCAGCTCCTTGTGTGGCAGAACAATCGAGTTCAGGATaGGCACCTCGGCAGGGATCCGGACTCGGCAGCCTGCAGCATGGA +
Preference number: 5 (lower is better)
Translates to: SFGSAPCVAEQSSSG*APRQGSGLGSLQHG
Trigger: TCCATGCTGCAGGCTGCCGAGTCCGGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481170.1
CDS-3UTR CAA 90 bp AGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCGAGCAGACATCAGCATaGAGCACGAAGAATGCCTCG +
Preference number: 5 (lower is better)
Translates to: RSPQAIHIAPRHVTIQPGEQTSA*STKNAS
Trigger: CGAGGCATTCTTCGTGCTCAATGCTGATGTCTGCTC...GCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTGCCGTAGTTGAGGGATaGCGTCCTGTTAGCCGTAGT +
Preference number: 5 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLAVVEG*RPVSRS
Trigger: ACTACGGCTAACAGGACGCAATCCCTCAACTACGGC...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCTTCCCGATGGAGACGTaGGGGCCCAGCACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: PTQRMIWLVKLRLSSLCGFPMET*GPSTAE
Trigger: CTCGGCTGTGCTGGGCCCCAACGTCTCCATCGGGAA...GCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCAGCAGCTTCCCGTCCTaGAAGAGGCTCTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVSSFPS*KRLSLS
Trigger: GGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGCT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTCTTCGGCTCAGCTCCTaGTGTGGCAGAACAATCGAG +
Preference number: 5 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLLRLSS*CGRTIE
Trigger: CTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAG...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCAACCCTGGCCTCTCATaGCCAGGGATTGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSNPGLS*PGIVGP
Trigger: TGGTCCCACAATCCCTGGCAATGAGAGGCCAGGGTT...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358215.8
ENST00000443704.5
CDS CCA 90 bp AATTCCTGCAGGTACCTGTCCCCAGGGACCCGAGAGCCAGCTCAGTaGATCTTAGGAAACAGATACCATGAGCCAGGGCACCTGACCGCC +
Preference number: 5 (lower is better)
Translates to: NSCRYLSPGTREPAQ*ILGNRYHEPGHLTA
Trigger: GGCGGTCAGGTGCCCTGGCTCATGGTATCTGTTTCCTAAGATCCACTGAGCTGGCTCTCGGGTCCCTGGGGACAGGTACCTGCAGGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000682340.1
ENST00000682443.1
ENST00000683106.1
ENST00000683241.1
ENST00000684274.1
ENST00000684412.1
ENST00000684562.1
CDS-3UTR CAA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTGAAGCGAGTTCCCTTTaGAGGGCCTCCAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLEASSL*RASNQD
Trigger: ATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTTC...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGAGGGGCTCATCAGGTaGGTAGAAGCCAATGAGCAG +
Preference number: 5 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVEGLIR*VEANEQ
Trigger: CTGCTCATTGGCTTCTACCAACCTGATGAGCCCCTC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp CAGAACAATCGAGTTCAGGATGAGCACCTCGGCAGGGATCCGGACTCGGCAGCCGAGGGGCTCATCAGGTaGGTAGAAGCCAATGAGCAG +
Preference number: 5 (lower is better)
Translates to: QNNRVQDEHLGRDPDSAAEGLIR*VEANEQ
Trigger: CTGCTCATTGGCTTCTACCAACCTGATGAGCCCCTC...GGCTGCCGAGTCCGGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCGCCGTAGTTGAGGGATaGCGTCCTGTTAGCCGTAGT +
Preference number: 5 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSAVVEG*RPVSRS
Trigger: ACTACGGCTAACAGGACGCAATCCCTCAACTACGGC...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGCCGTAGTTGAGGGATaGCGTCCTGTTAGCCGTAGT +
Preference number: 5 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVAVVEG*RPVSRS
Trigger: ACTACGGCTAACAGGACGCAATCCCTCAACTACGGC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp GCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCCCTTCGGCTCAGCTCCTaGTGTGGCAGAACAATCGAG +
Preference number: 5 (lower is better)
Translates to: AIHIAPRHVTIQPGFLWSLRLSS*CGRTIE
Trigger: CTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAG...GGACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCTTCGGCTCAGCTCCTaGTGTGGCAGAACAATCGAG +
Preference number: 5 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLLRLSS*CGRTIE
Trigger: CTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CAA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGCAGAGGATGATCTGGTaGGTGAAGCTTCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLQRMIW*VKLRLS
Trigger: GCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTG...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CAA 90 bp CCCTCACCCACGGTCACCCCCTTCCCGATGGAGACGTTGGGGCCCAGCACAGCCTGCTACCTCTGTATGTaGAACCCCAAATCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: PSPTVTPFPMETLGPSTACYLCM*NPKSKD
Trigger: GTCTTTTGATTTGGGGTTCAACATACAGAGGTAGCA...GGCTGTGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGGTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS TCA 90 bp GGGGTCACAGGGCTATGGGGCCTGCCTCACAATTGCCCATCCTGCTaGTTACGCTGGAAGACATCCCGAAGAGGCTTCAAGGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GVTGLWGLPHNCPSC*LRWKTSRRGFKASG
Trigger: TCCTGAAGCCTTGAAGCCTCTTCGGGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATTGTGAGGCAGGCCCCATAGCCCTGTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000682058.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683382.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684227.1
ENST00000684242.1
ENST00000684334.1
ENST00000684562.1
ENST00000684729.1
CDS CCA 90 bp CTTGGTGCTGGCCCAAAGTCCAGAAACCAGTTTCAGTCTCAGCTGTaGGGCCCCAGGGCACTCACCACTCTGGGCTATTTTCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: LGAGPKSRNQFQSQL*GPRALTTLGYFLLW
Trigger: CCAGAGGAGAAAATAGCCCAGAGTGGTGAGTGCCCTGGGGCCCCACAGCTGAGACTGAAACTGGTTTCTGGACTTTGGGCCAGCACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683106.1
CDS-3UTR CAA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCATCAGGATCACCGCTTaGAGCATAATGGTGACTGCT +
Preference number: 5 (lower is better)
Translates to: TQESPGHPHCSPACDDPAIRITA*SIMVTA
Trigger: AGCAGTCACCATTATGCTCAAAGCGGTGATCCTGAT...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGAAGCGAGTTCCCTTTaGAGGGCCTCCAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVEASSL*RASNQD
Trigger: ATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTTC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp AGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTGAAGCGAGTTCCCTTTaGAGGGCCTCCAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: SPQAIHIAPRHVTIQPGFEASSL*RASNQD
Trigger: ATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTTC...AAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGAAGCGAGTTCCCTTTaGAGGGCCTCCAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLEASSL*RASNQD
Trigger: ATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTTC...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CAA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGGCTTCAATATGGTGTaGGATCATAGGGACCCCTGC +
Preference number: 5 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLGFNMV*DHRDPC
Trigger: GCAGGGGTCCCTATGATCCAACACCATATTGAAGCC...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CAA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCGAGCAGACATCAGCATaGAGCACGAAGAATGCCTCG +
Preference number: 5 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVEQTSA*STKNAS
Trigger: CGAGGCATTCTTCGTGCTCAATGCTGATGTCTGCTC...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp TGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGGCCGTAGTTGAGGGATaGCGTCCTGTTAGCCGTAGT +
Preference number: 5 (lower is better)
Translates to: WGPSGSPTQRMIWLVKLRAVVEG*RPVSRS
Trigger: ACTACGGCTAACAGGACGCAATCCCTCAACTACGGC...CCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCAGCAGCTTCCCGTCCTaGAAGAGGCTCTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: QGSRGLLGSREGENPGVPSSFPS*KRLSLS
Trigger: GGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGCT...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CAGCCCACGATGCTATGCAGAACACACGTGTGCTCCTGCAAAGTGGCTCCATGGAACCCTGGCCTCTCATaGCCAGGGATTGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: QPTMLCRTHVCSCKVAPWNPGLS*PGIVGP
Trigger: TGGTCCCACAATCCCTGGCAATGAGAGGCCAGGGTT...CCATGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS TCA 90 bp AGGGATTGCGTCCTGTTAGCCGTAGTGCCAAGGAGTAAGAAAGGGTaGCGCTGGCGTCGGTGGGCTTCCAACATAGCACTCAAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RDCVLLAVVPRSKKG*RWRRWASNIALKGK
Trigger: CTTCCCCTTGAGTGCTATGTTGGAAGCCCACCGACGCCAGCGTCACCCTTTCTTACTCCTTGGCACTACGGCTAACAGGACGCAATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 42 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000455657.6
ENST00000480506.6
ENST00000481170.1
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682102.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683241.1
ENST00000683382.1
ENST00000683386.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683691.1
ENST00000683746.1
ENST00000683864.1
ENST00000683946.1
ENST00000684227.1
ENST00000684242.1
ENST00000684274.1
ENST00000684334.1
ENST00000684412.1
ENST00000684562.1
ENST00000684669.1
ENST00000684706.1
ENST00000684729.1
CDS GCA 90 bp GAGCCAGGGCACCTGACCGCCACCGCTTGCTCCCAGGACTACTCCTaGCCAAGGCCCACAGAGAAACTCTATATACTCAGAGATTCATTG +
Preference number: 5 (lower is better)
Translates to: EPGHLTATACSQDYS*PRPTEKLYILRDSL
Trigger: CAATGAATCTCTGAGTATATAGAGTTTCTCTGTGGGCCTTGGGCAGGAGTAGTCCTGGGAGCAAGCGGTGGCGGTCAGGTGCCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000682340.1
ENST00000682443.1
ENST00000683106.1
ENST00000683241.1
ENST00000684274.1
ENST00000684412.1
ENST00000684562.1
CDS GCA 90 bp TTAGGAAACAGATACCATGAGCCAGGGCACCTGACCGCCACCGCTTaGTCCCAGGACTACTCCTGCCCAAGGCCCACAGAGAAACTCTAT +
Preference number: 5 (lower is better)
Translates to: LGNRYHEPGHLTATA*SQDYSCPRPTEKLY
Trigger: ATAGAGTTTCTCTGTGGGCCTTGGGCAGGAGTAGTCCTGGGAGCAAGCGGTGGCGGTCAGGTGCCCTGGCTCATGGTATCTGTTTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000682340.1
ENST00000682443.1
ENST00000683106.1
ENST00000683241.1
ENST00000684274.1
ENST00000684412.1
ENST00000684562.1
CDS CCA 90 bp AGACGTTGGGGCCCAGCTGTGGAGAGAAGCACACACCATAAGCCCTaGAGGGACTTGGAGGATCCCCAAACCCAACTCCCTTCTAGAACA +
Preference number: 5 (lower is better)
Translates to: RRWGPAVERSTHHKP*RDLEDPQTQLPSRT
Trigger: TGTTCTAGAAGGGAGTTGGGTTTGGGGATCCTCCAAGTCCCTCCAGGGCTTATGGTGTGTGCTTCTCTCCACAGCTGGGCCCCAACGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
CDS-3UTR CAA 90 bp GAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTATCAGGATCACCGCTTaGAGCATAATGGTGACTGCT +
Preference number: 5 (lower is better)
Translates to: ESPGHPHCSPACDDPAWLIRITA*SIMVTA
Trigger: AGCAGTCACCATTATGCTCAAAGCGGTGATCCTGAT...AAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp TGTGGCAGAACAATCGAGTTCAGGATGAGCACCTCGGCAGGGATCCGGACTCGGGGCTTCAATATGGTGTaGGATCATAGGGACCCCTGC +
Preference number: 5 (lower is better)
Translates to: CGRTIEFRMSTSAGIRTRGFNMV*DHRDPC
Trigger: GCAGGGGTCCCTATGATCCAACACCATATTGAAGCC...CCGAGTCCGGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp TGGGGGCCTTCTGGCAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGGAGCAGACATCAGCATaGAGCACGAAGAATGCCTCG +
Preference number: 5 (lower is better)
Translates to: WGPSGSPTQRMIWLVKLREQTSA*STKNAS
Trigger: CGAGGCATTCTTCGTGCTCAATGCTGATGTCTGCTC...CCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTGCCAGAAGGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp CCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGCAGCTTCCCGTCCTaGAAGAGGCTCTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: PTQRMIWLVKLRLSSLCGSSFPS*KRLSLS
Trigger: GGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGCT...GCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp CAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCCCAGAGGATGATCTGGTaGGTGAAGCTTCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: QGSRGLLGSREGENPGVPQRMIW*VKLRLS
Trigger: GCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTG...GGGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CAGCCCACGATGCTATGCAGAACACACGTGTGCTCCTGCAAAGTGGCTCCATGGCAGAGGATGATCTGGTaGGTGAAGCTTCGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: QPTMLCRTHVCSCKVAPWQRMIW*VKLRLS
Trigger: GCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTG...CCATGGAGCCACTTTGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp CCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTAAAAGACAGGTTCCCTaGGCATCTCAAACACTGAAC +
Preference number: 5 (lower is better)
Translates to: PRSPQAIHIAPRHVTIQPKRQVP*ASQTLN
Trigger: GTTCAGTGTTTGAGATGCCAAGGGAACCTGTCTTTT...AGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358215.8
CDS-3UTR CAA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTATCCCAAACCGAATTaGATCAGGAAGGGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLYPKPN*IRKGQG
Trigger: TCCCTGCCCCTTCCTGATCAAATTCGGTTTGGGATA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373917.7
CDS TCA 90 bp TCAATCCCCAGGGGACCCAGCCTTCCATACCCTGCGGACTTGATCTaGCTCCAGATACCATCAGTGAGATGCACGTATATCTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SIPRGPSLPYPADLI*LQIPSVRCTYIWPC
Trigger: GCAGGGCCAGATATACGTGCATCTCACTGATGGTATCTGGAGTCAGATCAAGTCCGCAGGGTATGGAAGGCTGGGTCCCCTGGGGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000682340.1
CDS GCA 90 bp ACTCAAGGGGAAGTCGGAGCAGACATCAGCATTGAGCACGAAGAATaGCTCGGGGCTCCCAGCCAGGATCTGACTGGAAGGTTAAACTCC +
Preference number: 5 (lower is better)
Translates to: TQGEVGADISIEHEE*LGAPSQDLTGRLNS
Trigger: GGAGTTTAACCTTCCAGTCAGATCCTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCAATGCTGATGTCTGCTCCGACTTCCCCTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000682481.1
ENST00000683131.1
ENST00000683386.1
ENST00000683626.1
ENST00000684242.1
CDS CCA 90 bp GGCTTTAACTCTGGACTCGAGGTCAAGAATCCTGGTTCAGAGGGCTaGGGTGGAAGCCAAAGGTTAGGAATTGGGGCAGGCTGGGTACCT +
Preference number: 5 (lower is better)
Translates to: GFNSGLEVKNPGSEG*GGSQRLGIGAGWVP
Trigger: AGGTACCCAGCCTGCCCCAATTCCTAACCTTTGGCTTCCACCCCAGCCCTCTGAACCAGGATTCTTGACCTCGAGTCCAGAGTTAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373917.7
ENST00000481170.1
ENST00000682340.1
ENST00000683106.1
ENST00000683382.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 90 bp CGGTCGGGTGGATGTACACATTCCCTAGAAGCAGAAGAGAGGCCCTaGGGGCAAATATCCCAAACCGAATTTGATCAGGAAGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RSGGCTHSLEAEERP*GQISQTEFDQEGAG
Trigger: CCCTGCCCCTTCCTGATCAAATTCGGTTTGGGATATTTGCCCCCAGGGCCTCTCTTCTGCTTCTAGGGAATGTGTACATCCACCCGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000373917.7
ENST00000481170.1
ENST00000682102.1
ENST00000682340.1
ENST00000682576.1
ENST00000683106.1
ENST00000683382.1
ENST00000683617.1
ENST00000684242.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 90 bp GTGTGCGCCCAACTGTGTGTTGCTGTCTGTTCTGAAAGACGTCTCTaGGACACTCAGGGCTTAGGAGAAATGGACCAGAAGGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: VCAQLCVAVCSERRL*DTQGLGEMDQKGSG
Trigger: CCCACTCCCCTTCTGGTCCATTTCTCCTAAGCCCTGAGTGTCCCAGAGACGTCTTTCAGAACAGACAGCAACACACAGTTGGGCGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 21 transcripts:
ENST00000481170.1
ENST00000682058.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683382.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684227.1
ENST00000684242.1
ENST00000684334.1
ENST00000684562.1
ENST00000684729.1
CDS-3UTR CAA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCATCAGGATCACCGCTTaGAGCATAATGGTGACTGCT +
Preference number: 5 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVIRITA*SIMVTA
Trigger: AGCAGTCACCATTATGCTCAAAGCGGTGATCCTGAT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp ACCCAGGAGTCCCCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCACAGGAAACAATGGTTaGGGCACCTCAAAAGACAAA +
Preference number: 5 (lower is better)
Translates to: TQESPGHPHCSPACDDPATGNNG*GTSKDK
Trigger: TTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTGT...GGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGGGGACTCCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCGGCTTCAATATGGTGTaGGATCATAGGGACCCCTGC +
Preference number: 5 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPGFNMV*DHRDPC
Trigger: GCAGGGGTCCCTATGATCCAACACCATATTGAAGCC...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCGAGCAGACATCAGCATaGAGCACGAAGAATGCCTCG +
Preference number: 5 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPEQTSA*STKNAS
Trigger: CGAGGCATTCTTCGTGCTCAATGCTGATGTCTGCTC...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp CAGCCCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGCTTCGGCTCAGCTCCTaGTGTGGCAGAACAATCGAG +
Preference number: 5 (lower is better)
Translates to: QPYSEDDLVGEASAQLLVLRLSS*CGRTIE
Trigger: CTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAG...CACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS TCA 90 bp TGCACCCGAGCATGTGTGCGCCCAACTGTGTGTTGCTGTCTGTTCTaGAAGACGTCTCTGGGACACTCAGGGCTTAGGAGAAATGGACCA +
Preference number: 5 (lower is better)
Translates to: CTRACVRPTVCCCLF*KTSLGHSGLRRNGP
Trigger: TGGTCCATTTCTCCTAAGCCCTGAGTGTCCCAGAGACGTCTTTCAGAACAGACAGCAACACACAGTTGGGCGCACACATGCTCGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000481170.1
ENST00000682058.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683382.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684227.1
ENST00000684242.1
ENST00000684334.1
ENST00000684562.1
ENST00000684729.1
CDS-3UTR CAA 90 bp CCGGACTCGGCAGCCCAGGATGGTGATAGCAGGCAGCAGCTTCCCGTCCTTGAAACAGGAAACAATGGTTaGGGCACCTCAAAAGACAAA +
Preference number: 5 (lower is better)
Translates to: PDSAAQDGDSRQQLPVLETGNNG*GTSKDK
Trigger: TTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTGT...TTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGGCTGCCGAGTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS GCA 90 bp ATATACGAGTGTGTGCACAAACACCTGACTGGAAGGTTAAACTCCTaGTGGGCGGCTTCTAGGAACTGGGTGAGGGGCTCATCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: IYECVHKHLTGRLNS*WAASRNWVRGSSGW
Trigger: CCAACCTGATGAGCCCCTCACCCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCCAGTCAGGTGTTTGTGCACACACTCGTATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000635609.2
ENST00000682340.1
ENST00000682443.1
ENST00000683106.1
ENST00000683241.1
ENST00000683864.1
ENST00000684274.1
ENST00000684412.1
ENST00000684562.1
CDS-3UTR CAA 90 bp CCAAGGTTCACGGGGTTTATTAGGGAGTCGGGAGGGAGAAAACCCAGGAGTCCCATCAGGATCACCGCTTaGAGCATAATGGTGACTGCT +
Preference number: 5 (lower is better)
Translates to: PRFTGFIRESGGRKPRSPIRITA*SIMVTA
Trigger: AGCAGTCACCATTATGCTCAAAGCGGTGATCCTGAT...GGGACTCCTGGGTTTTCTCCCTCCCGACTCCCTAATAAACCCCGTGAACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
CDS-3UTR CAA 90 bp GTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGAACAATCGAGTTCAGGATGAGCGAAGCGAGTTCCCTTTaGAGGGCCTCCAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: VKLRLSSLCGRTIEFRMSEASSL*RASNQD
Trigger: ATCCTGATTGGAGGCCCTCAAAAGGGAACTCGCTTC...GCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGACAGGAAACAATGGTTaGGGCACCTCAAAAGACAAA +
Preference number: 5 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLTGNNG*GTSKDK
Trigger: TTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTGT...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
CDS-3UTR CAA 90 bp GGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGGTCACAGGAAACAATGGTTaGGGCACCTCAAAAGACAAA +
Preference number: 5 (lower is better)
Translates to: GHPHCSPACDDPAWLSLVTGNNG*GTSKDK
Trigger: TTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTGT...GACCAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313597.10
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
CDS-3UTR CAA 90 bp CCAGGCCATCCACATTGCTCCCCGGCATGTGACGATCCAGCCTGGCTTTCTCTGTGCTACCTCTGTATGTaGAACCCCAAATCAAAAGAC +
Preference number: 5 (lower is better)
Translates to: PGHPHCSPACDDPAWLSLCYLCM*NPKSKD
Trigger: GTCTTTTGATTTGGGGTTCAACATACAGAGGTAGCA...CAGAGAAAGCCAGGCTGGATCGTCACATGCCGGGGAGCAATGTGGATGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358215.8
CDS CCA 90 bp CTTGAGGGGGCGCCATTCACATTGTCATCTGTGAATGATGGTCCTTaGAGTTATGCCTGGTGGGAAGAGTTCATGGTTGGGAAAGGGGGA +
Preference number: 5 (lower is better)
Translates to: LEGAPFTLSSVNDGP*SYAWWEEFMVGKGG
Trigger: TCCCCCTTTCCCAACCATGAACTCTTCCCACCAGGCATAACTCCAAGGACCATCATTCACAGATGACAATGTGAATGGCGCCCCCTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683203.1
ENST00000683964.1
CDS GCA 90 bp GACCTGGGCACAGGCTTCAATATGGTGTTGGATCATAGGGACCCCTaGCACAGGAAACAATGGTTTGGGCACCTCAAAAGACAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: DLGTGFNMVLDHRDP*HRKQWFGHLKRQRS
Trigger: AGACCTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTGTGGCAGGGGTCCCTATGATCCAACACCATATTGAAGCCTGTGCCCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 37 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000443704.5
ENST00000455657.6
ENST00000480506.6
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682102.1
ENST00000682340.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683131.1
ENST00000683241.1
ENST00000683382.1
ENST00000683386.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683691.1
ENST00000683864.1
ENST00000683946.1
ENST00000684227.1
ENST00000684242.1
ENST00000684274.1
ENST00000684334.1
ENST00000684412.1
ENST00000684562.1
ENST00000684669.1
ENST00000684706.1
ENST00000684729.1
CDS GCA 90 bp AGGCTGGGCACAGGCTTCAATATGGTGTTGGATCATAGGGACCCCTaGCACAGGAAACAATGGTTTGGGCACCTCAAAAGACAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: RLGTGFNMVLDHRDP*HRKQWFGHLKRQRS
Trigger: AGACCTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTGTGGCAGGGGTCCCTATGATCCAACACCATATTGAAGCCTGTGCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635609.2
CDS-3UTR CAA 90 bp CCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAAAAGACAGGTTCCCTaGGCATCTCAAACACTGAAC +
Preference number: 5 (lower is better)
Translates to: PTQRMIWLVKLRLSSLCGKRQVP*ASQTLN
Trigger: GTTCAGTGTTTGAGATGCCAAGGGAACCTGTCTTTT...GCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS GCA 90 bp TACCTGGGCACAGGCTTCAATATGGTGTTGGATCATAGGGACCCCTaGCACAGGAAACAATGGTTTGGGCACCTCAAAAGACAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: YLGTGFNMVLDHRDP*HRKQWFGHLKRQRS
Trigger: AGACCTTTGTCTTTTGAGGTGCCCAAACCATTGTTTCCTGTGGCAGGGGTCCCTATGATCCAACACCATATTGAAGCCTGTGCCCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683203.1
ENST00000683752.1
ENST00000683964.1
CDS CCA 90 bp GCAGAATCTCCTGCATTCCAGGGACCTGAGGACAAGGGAAGAGGCTaGGATGAAGAATATCTAATAGGAGGGGATGTTGGGGAAATCCTT +
Preference number: 5 (lower is better)
Translates to: AESPAFQGPEDKGRG*DEEYLIGGDVGEIL
Trigger: AAGGATTTCCCCAACATCCCCTCCTATTAGATATTCTTCATCCCAGCCTCTTCCCTTGTCCTCAGGTCCCTGGAATGCAGGAGATTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683106.1
CDS CCA 90 bp TCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTaGCAGAACAATCGAGTTCAGGATGAGCACCTCAAAAGACAAAGG +
Preference number: 5 (lower is better)
Translates to: SEDDLVGEASAQLLV*QNNRVQDEHLKRQR
Trigger: CCTTTGTCTTTTGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682488.1
CDS-3UTR CAA 90 bp ATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGAACAATCGAGATCAGGATCACCGCTTaGAGCATAATGGTGACTGCT +
Preference number: 5 (lower is better)
Translates to: MIWLVKLRLSSLCGRTIEIRITA*SIMVTA
Trigger: AGCAGTCACCATTATGCTCAAAGCGGTGATCCTGAT...CTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443704.5
CDS-3UTR CAA 90 bp CTTGGTAACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGAGCAGCTTCCCGTCCTaGAAGAGGCTCTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: LGNCLLKEETRVHTEERMSSFPS*KRLSLS
Trigger: GGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGCT...CATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTTACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS TCA 90 bp GTCCTAATACGGACGACTGGGTCTAAATCTCTGGATTCGGAGGATTaGTTGATTGCTGACCCTCTGAACCCCACAACTGACTCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: VLIRTTGSKSLDSED*LIADPLNPTTDSVQ
Trigger: TTGGACAGAGTCAGTTGTGGGGTTCAGAGGGTCAGCAATCAATCAATCCTCCGAATCCAGAGATTTAGACCCAGTCGTCCGTATTAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000358215.8
ENST00000443704.5
ENST00000455657.6
ENST00000622191.2
ENST00000682102.1
ENST00000682443.1
ENST00000682576.1
ENST00000683131.1
ENST00000683402.1
ENST00000683598.1
ENST00000683691.1
ENST00000683752.1
ENST00000683946.1
CDS TCA 90 bp AGGATCCCCAAACCCAACTCCCTTCTAGAACAGATAAGGCATAAGTaGCCTGCTCGAGGACACACAATAGGCTGTGACAAAGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: RIPKPNSLLEQIRHK*PARGHTIGCDKVKK
Trigger: TTTCTTCACTTTGTCACAGCCTATTGTGTGTCCTCGAGCAGGTCACTTATGCCTTATCTGTTCTAGAAGGGAGTTGGGTTTGGGGATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS TCA 90 bp TCTCAAATCCCAACCCAGATTCCAGTCGGCCTTCAAACCTCACAGTaGTTCCTCCCAAATTCTGAAATTCACACCCCACAATTTGATCTC +
Preference number: 5 (lower is better)
Translates to: SQIPTQIPVGLQTSQ*FLPNSEIHTPQFDL
Trigger: GAGATCAAATTGTGGGGTGTGAATTTCAGAATTTGGGAGGAATCACTGTGAGGTTTGAAGGCCGACTGGAATCTGGGTTGGGATTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683402.1
CDS-3UTR CAA 90 bp GGTAACTGTTTGCTAAAAGAAGAAACACGCGTGCACACAGAGGAACGAATGCTCGCCCTTGGTAACTGTTaGCTAAAAGAAGAAACACGC +
Preference number: 5 (lower is better)
Translates to: GNCLLKEETRVHTEERMLALGNC*LKEETR
Trigger: GCGTGTTTCTTCTTTTAGCAAACAGTTACCAAGGGC...GAGCATTCGTTCCTCTGTGTGCACGCGTGTTTCTTCTTTTAGCAAACAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480034.1
CDS TCA 90 bp AGAGAGGGTGTGTTATTTGTTGCAGACCTCACAGCAGGCAGAGACTaGATTCAAACCAAAACCTTGCCTGGCTCAATACGAAAAGCAATA +
Preference number: 5 (lower is better)
Translates to: REGVLFVADLTAGRD*IQTKTLPGSIRKAI
Trigger: TATTGCTTTTCGTATTGAGCCAGGCAAGGTTTTGGTTTGAATTCAGTCTCTGCCTGCTGTGAGGTCTGCAACAAATAACACACCCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1
CDS TCA 90 bp CTCAAATTCCCAAAGTGTTGCGTCTTCATTCTAGATATTAAGCCCTaGACCCCAATAGTGAACCCTGAATATTGGACAGCAAACCCTGAG +
Preference number: 5 (lower is better)
Translates to: LKFPKCCVFILDIKP*TPIVNPEYWTANPE
Trigger: CTCAGGGTTTGCTGTCCAATATTCAGGGTTCACTATTGGGGTTCAGGGCTTAATATCTAGAATGAAGACGCAACACTTTGGGAATTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683402.1
CDS GCA 90 bp TTTACACATAAGGAAACTGAGTGTCAGAGAGGGTGTGTTATTTGTTaGAGACCTCACAGCAGGCAGAGACTGAATTCAAACCAAAACCTT +
Preference number: 5 (lower is better)
Translates to: FTHKETECQRGCVIC*RPHSRQRLNSNQNL
Trigger: AAGGTTTTGGTTTGAATTCAGTCTCTGCCTGCTGTGAGGTCTGCAACAAATAACACACCCTCTCTGACACTCAGTTTCCTTATGTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1
CDS CCA 90 bp AGACCTCACAGCAGGCAGAGACTGAATTCAAACCAAAACCTTGCCTaGCTCAATACGAAAAGCAATAAAGAAATGAGCAACAATGTGATC +
Preference number: 5 (lower is better)
Translates to: RPHSRQRLNSNQNLA*LNTKSNKEMSNNVI
Trigger: GATCACATTGTTGCTCATTTCTTTATTGCTTTTCGTATTGAGCCAGGCAAGGTTTTGGTTTGAATTCAGTCTCTGCCTGCTGTGAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1
CDS GCA 90 bp AGCAATAAAGAAATGAGCAACAATGTGATCAAGGATATGAATTTGTaGTTGGTTATCATTAAGAGTCTCCATGCTACGGCTTTACATTGT +
Preference number: 5 (lower is better)
Translates to: SNKEMSNNVIKDMNL*LVIIKSLHATALHC
Trigger: ACAATGTAAAGCCGTAGCATGGAGACTCTTAATGATAACCAAGCACAAATTCATATCCTTGATCACATTGTTGCTCATTTCTTTATTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1
CDS CCA 72 bp CCATCCATCCGACCACCACCCTTCCCTCCCTGGGGCTaGGACCAGTGCTCACCACAGCCGAGGGGGCCACCT +
Preference number: 6 (lower is better)
Translates to: PSIRPPPFPPWG*DQCSPQPRGPP
Trigger: AGGTGGCCCCCTCGGCTGTGGTGAGCACTGGTCCCAGCCCCAGGGAGGGAAGGGTGGTGGTCGGATGGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 72 bp CACCCTCCATCCATCCGACCACCACCCTTCCCTCCCTaGGGCTGGGACCAGTGCTCACCACAGCCGAGGGGG +
Preference number: 6 (lower is better)
Translates to: HPPSIRPPPFPP*GWDQCSPQPRG
Trigger: CCCCCTCGGCTGTGGTGAGCACTGGTCCCAGCCCCAGGGAGGGAAGGGTGGTGGTCGGATGGATGGAGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 72 bp CCCAGCACAGCCGAGGGGGCCACCTTGGCGGTCGGGTaGATGTACACATTCCCTCGGATCCATGGGCCCCCT +
Preference number: 6 (lower is better)
Translates to: PSTAEGATLAVG*MYTFPRIHGPP
Trigger: AGGGGGCCCATGGATCCGAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 22 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000455657.6
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682443.1
ENST00000682481.1
ENST00000683131.1
ENST00000683386.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683626.1
ENST00000683746.1
ENST00000683752.1
ENST00000683864.1
ENST00000683946.1
ENST00000684274.1
ENST00000684706.1
CDS CCA 72 bp TGGGGCAGGCTGGGTACCTCGGATCCATGGGCCCCCTaGGGTGTGCTTGGCCAGCCGTTCTGGGTGAGTGTC +
Preference number: 6 (lower is better)
Translates to: WGRLGTSDPWAP*GVLGQPFWVSV
Trigger: GACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGTACCCAGCCTGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373917.7
ENST00000481170.1
ENST00000682340.1
ENST00000683106.1
ENST00000683382.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 72 bp GAGGCCCTCGGATCCATGGGCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAGTGTCCTGGTATCGGC +
Preference number: 6 (lower is better)
Translates to: EALGSMGPLGCA*PAVLGECPGIG
Trigger: GCCGATACCAGGACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000443704.5
ENST00000682435.1
ENST00000683241.1
ENST00000683691.1
ENST00000684227.1
ENST00000684562.1
ENST00000684729.1
CDS CCA 72 bp ACCTCGGCAGGGATCCGGACTCGGCAGCCTGCAGCATaGATGAGGGCACCAGGGGAGGTCATGGGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: TSAGIRTRQPAA*MRAPGEVMGGE
Trigger: CTCCCCTCCCATGACCTCCCCTGGTGCCCTCATCCATGCTGCAGGCTGCCGAGTCCGGATCCCTGCCGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481170.1
CDS GCA 72 bp GATGAGCACCTCGGCAGGGATCCGGACTCGGCAGCCTaGAGCATGGATGAGGGCACCAGGGGAGGTCATGGG +
Preference number: 6 (lower is better)
Translates to: DEHLGRDPDSAA*SMDEGTRGGHG
Trigger: CCCATGACCTCCCCTGGTGCCCTCATCCATGCTGCAGGCTGCCGAGTCCGGATCCCTGCCGAGGTGCTCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481170.1
CDS CCA 72 bp GGGTACCTCGGATCCATGGGCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAGTGTCCTGGTATCGGC +
Preference number: 6 (lower is better)
Translates to: GYLGSMGPLGCA*PAVLGECPGIG
Trigger: GCCGATACCAGGACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGTACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000373917.7
ENST00000481170.1
ENST00000682340.1
ENST00000683106.1
ENST00000683382.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 72 bp CCAGGGTGGGGGTGGCAAGAATCAGTGCTTGTGCTCTaGGGCCCCATCCGACAGCATGTGCCCTCACGGGGG +
Preference number: 6 (lower is better)
Translates to: PGWGWQESVLVL*GPIRQHVPSRG
Trigger: CCCCCGTGAGGGCACATGCTGTCGGATGGGGCCCCAGAGCACAAGCACTGATTCTTGCCACCCCCACCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS CCA 72 bp CATTCCCTCGGATCCATGGGCCCCCTGGGGTGTGCTTaGCCAGCCGTTCTGGGTGAGTGTCCTGGTATCGGC +
Preference number: 6 (lower is better)
Translates to: HSLGSMGPLGCA*PAVLGECPGIG
Trigger: GCCGATACCAGGACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGGAATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000455657.6
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682443.1
ENST00000682481.1
ENST00000683131.1
ENST00000683386.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683626.1
ENST00000683746.1
ENST00000683752.1
ENST00000683864.1
ENST00000683946.1
ENST00000684274.1
ENST00000684706.1
CDS CCA 72 bp GAAGCAGAAGAGAGGCCCTCGGATCCATGGGCCCCCTaGGGTGTGCTTGGCCAGCCGTTCTGGGTGAGTGTC +
Preference number: 6 (lower is better)
Translates to: EAEERPSDPWAP*GVLGQPFWVSV
Trigger: GACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGGCCTCTCTTCTGCTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000443704.5
ENST00000682435.1
ENST00000683241.1
ENST00000683691.1
ENST00000684227.1
ENST00000684562.1
ENST00000684729.1
CDS GCA 72 bp AGATACCATGAGCCAGGGCACCTGACCGCCACCGCTTaGTCCCAGGACTACTCCTGCCCAAGGCCCACAGAG +
Preference number: 6 (lower is better)
Translates to: RYHEPGHLTATA*SQDYSCPRPTE
Trigger: CTCTGTGGGCCTTGGGCAGGAGTAGTCCTGGGAGCAAGCGGTGGCGGTCAGGTGCCCTGGCTCATGGTATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000682340.1
ENST00000682443.1
ENST00000683106.1
ENST00000683241.1
ENST00000684274.1
ENST00000684412.1
ENST00000684562.1
CDS CCA 72 bp CCCAGCACAGCCGAGGGGGCCACCTTGGCGGTCGGGTaGATGTACACATTCCCTAGAAGCAGAAGAGAGGCC +
Preference number: 6 (lower is better)
Translates to: PSTAEGATLAVG*MYTFPRSRREA
Trigger: GGCCTCTCTTCTGCTTCTAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000373917.7
ENST00000443704.5
ENST00000682102.1
ENST00000682340.1
ENST00000682435.1
ENST00000682576.1
ENST00000683241.1
ENST00000683382.1
ENST00000683617.1
ENST00000683691.1
ENST00000684227.1
ENST00000684242.1
ENST00000684562.1
ENST00000684729.1
CDS CCA 72 bp CCTCTCTCCAGGTCTGGTTCGGCCCTCTCTGGGATGTaGCTGCTCACATCCCAGGAACCTCTCCCACCCAGC +
Preference number: 6 (lower is better)
Translates to: PLSRSGSALSGM*LLTSQEPLPPS
Trigger: GCTGGGTGGGAGAGGTTCCTGGGATGTGAGCAGCCACATCCCAGAGAGGGCCGAACCAGACCTGGAGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000481170.1
ENST00000682340.1
ENST00000683382.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684242.1
ENST00000684334.1
CDS CAA 72 bp CTGGGACCAGTGCTCACCACAGCCGAGGGGGCCACCTaGGCGGTCGGGTGGATGTACACATTCCCTAGAAGC +
Preference number: 6 (lower is better)
Translates to: LGPVLTTAEGAT*AVGWMYTFPRS
Trigger: GCTTCTAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGGTGAGCACTGGTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS CAA 90 bp TCCCTGGGGCTGGGACCAGTGCTCACCACAGCCGAGGGGGCCACCTaGGCGGTCGGGTGGATGTACACATTCCCTAGAAGCAGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: SLGLGPVLTTAEGAT*AVGWMYTFPRSRRE
Trigger: CTCTCTTCTGCTTCTAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGGTGAGCACTGGTCCCAGCCCCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS GCA 72 bp ATCTGGCCCTGCCCTGCCAGGGCTGAAAACACATCCTaGTCTAGGCGGATGGTACCTGCCCCTGGCCACAAG +
Preference number: 6 (lower is better)
Translates to: IWPCPARAENTS*SRRMVPAPGHK
Trigger: CTTGTGGCCAGGGGCAGGTACCATCCGCCTAGAGCAGGATGTGTTTTCAGCCCTGGCAGGGCAGGGCCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 40 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000481170.1
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682102.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683241.1
ENST00000683382.1
ENST00000683386.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683691.1
ENST00000683746.1
ENST00000683752.1
ENST00000683864.1
ENST00000683946.1
ENST00000684227.1
ENST00000684242.1
ENST00000684274.1
ENST00000684334.1
ENST00000684412.1
ENST00000684562.1
ENST00000684706.1
ENST00000684729.1
CDS CCA 72 bp GTGGATGTACACATTCCCTCGGATCCATGGGCCCCCTaGGGTGTGCTTGGCCAGCCGTTCTGGGTGAGTGTC +
Preference number: 6 (lower is better)
Translates to: VDVHIPSDPWAP*GVLGQPFWVSV
Trigger: GACACTCACCCAGAACGGCTGGCCAAGCACACCCCAGGGGGCCCATGGATCCGAGGGAATGTGTACATCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000455657.6
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682443.1
ENST00000682481.1
ENST00000683131.1
ENST00000683386.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683626.1
ENST00000683746.1
ENST00000683752.1
ENST00000683864.1
ENST00000683946.1
ENST00000684274.1
ENST00000684706.1
CDS CCA 72 bp CTAAGCCCCTCTCTCCAGGTCTGGTTCGGCCCTCTCTaGGATGTGGCTGCTCACATCCCAGGAACCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LSPSLQVWFGPL*DVAAHIPGTSP
Trigger: GGGAGAGGTTCCTGGGATGTGAGCAGCCACATCCCAGAGAGGGCCGAACCAGACCTGGAGAGAGGGGCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000481170.1
ENST00000682340.1
ENST00000683382.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684242.1
ENST00000684334.1
CDS CCA 72 bp CTCACCACAGCCGAGGGGGCCACCTTGGCGGTCGGGTaGATGTACACATTCCCTAGAAGCAGAAGAGAGGCC +
Preference number: 6 (lower is better)
Translates to: LTTAEGATLAVG*MYTFPRSRREA
Trigger: GGCCTCTCTTCTGCTTCTAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGGTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 72 bp TGGGACCAGTGCTCACCACAGCCGAGGGGGCCACCTTaGCGGTCGGGTGGATGTACACATTCCCTAGAAGCA +
Preference number: 6 (lower is better)
Translates to: WDQCSPQPRGPP*RSGGCTHSLEA
Trigger: TGCTTCTAGGGAATGTGTACATCCACCCGACCGCCAAGGTGGCCCCCTCGGCTGTGGTGAGCACTGGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 72 bp CACCCCCTTCCCGATGGAGACGTTGGGGCCCAGCTGTaGAGAGAAGCACACACCATAAGCCCTGGAGGGACT +
Preference number: 6 (lower is better)
Translates to: HPLPDGDVGAQL*REAHTISPGGT
Trigger: AGTCCCTCCAGGGCTTATGGTGTGTGCTTCTCTCCACAGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
CDS CCA 72 bp CCTCACCCACGGTCACCCCCTTCCCGATGGAGACGTTaGGGCCCAGCTGTGGAGAGAAGCACACACCATAAG +
Preference number: 6 (lower is better)
Translates to: PHPRSPPSRWRR*GPAVERSTHHK
Trigger: CTTATGGTGTGTGCTTCTCTCCACAGCTGGGCCCCAACGTCTCCATCGGGAAGGGGGTGACCGTGGGTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
CDS CAA 90 bp GAAGCCATACCCAGGATGGTGATAGCAGGCAGCAGCTTCCCGTCCTaGAAGAGGCTCTCACTGTCCATGCGGGCTCGGGGATCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: EAIPRMVIAGSSFPS*KRLSLSMRARGSLG
Trigger: CCCCAACGATCCCCGAGCCCGCATGGACAGTGAGAGCCTCTTCAAGGACGGGAAGCTGCTGCCTGCTATCACCATCCTGGGTATGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480034.1
ENST00000481170.1
CDS GCA 72 bp ACTAGCTCCCTTCACTCCAGCTCTGCCGCCCGCTACTaGAAGCTCCTTCCGCGCACGTGTCTTCTCGCAAGT +
Preference number: 6 (lower is better)
Translates to: TSSLHSSSAARY*KLLPRTCLLAS
Trigger: ACTTGCGAGAAGACACGTGCGCGGAAGGAGCTTGCAGTAGCGGGCGGCAGAGCTGGAGTGAAGGGAGCTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000682058.1
ENST00000682340.1
ENST00000683241.1
ENST00000683382.1
ENST00000683591.1
ENST00000683746.1
ENST00000684227.1
ENST00000684274.1
ENST00000684562.1
ENST00000684669.1
CDS CCA 72 bp AAAGTGAAGAAACCGGCACCCAGAACTCAGGCAGCGTaGGCACCCTCCATCCATCCGACCACCACCCTTCCC +
Preference number: 6 (lower is better)
Translates to: KVKKPAPRTQAA*APSIHPTTTLP
Trigger: GGGAAGGGTGGTGGTCGGATGGATGGAGGGTGCCCACGCTGCCTGAGTTCTGGGTGCCGGTTTCTTCACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 72 bp GCACCAGCTCAGGCCCACCCAGCTCAGAGGATGATCTaGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGC +
Preference number: 6 (lower is better)
Translates to: APAQAHPAQRMI*LVKLRLSSLCG
Trigger: GCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGCTGGGTGGGCCTGAGCTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS CCA 72 bp GGGAACAGGCATGTGGGCCATCATCATAGGTGGGGGTaGGAGCCTCAGTTGACTGGCCAGGAGGGGATGCAT +
Preference number: 6 (lower is better)
Translates to: GNRHVGHHHRWG*EPQLTGQEGMH
Trigger: ATGCATCCCCTCCTGGCCAGTCAACTGAGGCTCCCACCCCCACCTATGATGATGGCCCACATGCCTGTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS CCA 72 bp GGGTCTGCTGTGTTCTCGTGGAGGGGAACAGGCATGTaGGCCATCATCATAGGTGGGGGTGGGAGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: GSAVFSWRGTGM*AIIIGGGGSLS
Trigger: ACTGAGGCTCCCACCCCCACCTATGATGATGGCCCACATGCCTGTTCCCCTCCACGAGAACACAGCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS TCA 72 bp TCAGCTCCTTGTGTGGCAGAACAATCGAGTTCAGGATaGGCACCTCGGCAGGGATCCGGACTCGGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: SAPCVAEQSSSG*APRQGSGLGSL
Trigger: CAGGCTGCCGAGTCCGGATCCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481170.1
CDS GCA 72 bp GCTCCCAGCCAGGATCTGACTGGAAGGTTAAACTCCTaGTGGGCGGCTTCTAGGAACTGGGTGAGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: APSQDLTGRLNS*WAASRNWVRGS
Trigger: TGAGCCCCTCACCCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCCAGTCAGATCCTGGCTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000682481.1
ENST00000683131.1
ENST00000683386.1
ENST00000683626.1
ENST00000684242.1
CDS CCA 72 bp ATTCCCACCACCTCTCTAAGCCCCTCTCTCCAGGTCTaGTTCGGCCCTCTCTGGGATGTGGCTGCTCACATC +
Preference number: 6 (lower is better)
Translates to: IPTTSLSPSLQV*FGPLWDVAAHI
Trigger: GATGTGAGCAGCCACATCCCAGAGAGGGCCGAACCAGACCTGGAGAGAGGGGCTTAGAGAGGTGGTGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000481170.1
ENST00000682340.1
ENST00000683382.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684242.1
ENST00000684334.1
CDS CCA 72 bp GGCCCAGCTGTGGAGAGAAGCACACACCATAAGCCCTaGAGGGACTTGGAGGATCCCCAAACCCAACTCCCT +
Preference number: 6 (lower is better)
Translates to: GPAVERSTHHKP*RDLEDPQTQLP
Trigger: AGGGAGTTGGGTTTGGGGATCCTCCAAGTCCCTCCAGGGCTTATGGTGTGTGCTTCTCTCCACAGCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
CDS CCA 72 bp GGGCAGGAGAGCCCTAAGGGGTCTGCTGTGTTCTCGTaGAGGGGAACAGGCATGTGGGCCATCATCATAGGT +
Preference number: 6 (lower is better)
Translates to: GQESPKGSAVFS*RGTGMWAIIIG
Trigger: ACCTATGATGATGGCCCACATGCCTGTTCCCCTCCACGAGAACACAGCAGACCCCTTAGGGCTCTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS CAA 72 bp CCAGCTCAGGCCCACCCAGCTCAGAGGATGATCTGGTaGGTGAAGCTTCGGCTCAGCTCCTTGTGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: PAQAHPAQRMIW*VKLRLSSLCGR
Trigger: TCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGCTGGGTGGGCCTGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS CCA 72 bp CCCAGCCAGGATCTGACTGGAAGGTTAAACTCCTGCTaGGCGGCTTCTAGGAACTGGGTGAGGGGCTCATCA +
Preference number: 6 (lower is better)
Translates to: PSQDLTGRLNSC*AASRNWVRGSS
Trigger: TGATGAGCCCCTCACCCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCCAGTCAGATCCTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000682481.1
ENST00000683131.1
ENST00000683386.1
ENST00000683626.1
ENST00000684242.1
CDS CCA 72 bp CCCAGTGGGGGCGTGGAAGGGAGCAGGAAGATGTGCTaGGCGTCAATGGGAGCGAATGCTCTCCTAAAGAAA +
Preference number: 6 (lower is better)
Translates to: PSGGVEGSRKMC*ASMGANALLKK
Trigger: TTTCTTTAGGAGAGCATTCGCTCCCATTGACGCCCAGCACATCTTCCTGCTCCCTTCCACGCCCCCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS CAA 72 bp ACTTGGGGTCACAGGGCTATGGGGCCTGCCTCACAATaGCCCATCCTGCTGATTACGCTGGAAGACATCCCG +
Preference number: 6 (lower is better)
Translates to: TWGHRAMGPASQ*PILLITLEDIP
Trigger: CGGGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATTGTGAGGCAGGCCCCATAGCCCTGTGACCCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000682058.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683382.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684227.1
ENST00000684242.1
ENST00000684334.1
ENST00000684562.1
ENST00000684729.1
CDS CAA 90 bp GCTTCCAACATAGCACTCAAGGGGAAGTCGGAGCAGACATCAGCATaGAGCACGAAGAATGCCTCGGGGCTCCCAGCCAGGATCTGGTCT +
Preference number: 6 (lower is better)
Translates to: ASNIALKGKSEQTSA*STKNASGLPARIWS
Trigger: AGACCAGATCCTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCAATGCTGATGTCTGCTCCGACTTCCCCTTGAGTGCTATGTTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 37 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000455657.6
ENST00000480506.6
ENST00000481170.1
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682102.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682576.1
ENST00000683106.1
ENST00000683241.1
ENST00000683382.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683691.1
ENST00000683746.1
ENST00000683864.1
ENST00000683946.1
ENST00000684227.1
ENST00000684274.1
ENST00000684334.1
ENST00000684412.1
ENST00000684562.1
ENST00000684669.1
ENST00000684706.1
ENST00000684729.1
CDS CAA 90 bp CCAGCTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTaGTGTGGCAGAACAATCGAGTTCAGGATGAGCACCTCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PAQRMIWLVKLRLSS*CGRTIEFRMSTSAG
Trigger: CCCTGCCGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS TCA 72 bp GTCCTGTTAGCCGTAGTGCCAAGGAGTAAGAAAGGGTaGCGCTGGCGTCGGTGGGCTTCCAACATAGCACTC +
Preference number: 6 (lower is better)
Translates to: VLLAVVPRSKKG*RWRRWASNIAL
Trigger: GAGTGCTATGTTGGAAGCCCACCGACGCCAGCGTCACCCTTTCTTACTCCTTGGCACTACGGCTAACAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 42 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000455657.6
ENST00000480506.6
ENST00000481170.1
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682102.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683241.1
ENST00000683382.1
ENST00000683386.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683691.1
ENST00000683746.1
ENST00000683864.1
ENST00000683946.1
ENST00000684227.1
ENST00000684242.1
ENST00000684274.1
ENST00000684334.1
ENST00000684412.1
ENST00000684562.1
ENST00000684669.1
ENST00000684706.1
ENST00000684729.1
CDS TCA 72 bp GGGCTATGGGGCCTGCCTCACAATTGCCCATCCTGCTaGTTACGCTGGAAGACATCCCGAAGAGGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: GLWGLPHNCPSC*LRWKTSRRGFK
Trigger: CTTGAAGCCTCTTCGGGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATTGTGAGGCAGGCCCCATAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000682058.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683382.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684227.1
ENST00000684242.1
ENST00000684334.1
ENST00000684562.1
ENST00000684729.1
CDS GCA 72 bp GAAGTCGGAGCAGACATCAGCATTGAGCACGAAGAATaGCTCGGGGCTCCCAGCCAGGATCTGGTCTCGAAA +
Preference number: 6 (lower is better)
Translates to: EVGADISIEHEE*LGAPSQDLVSK
Trigger: TTTCGAGACCAGATCCTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCAATGCTGATGTCTGCTCCGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 37 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000455657.6
ENST00000480506.6
ENST00000481170.1
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682102.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682576.1
ENST00000683106.1
ENST00000683241.1
ENST00000683382.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683691.1
ENST00000683746.1
ENST00000683864.1
ENST00000683946.1
ENST00000684227.1
ENST00000684274.1
ENST00000684334.1
ENST00000684412.1
ENST00000684562.1
ENST00000684669.1
ENST00000684706.1
ENST00000684729.1
CDS GCA 72 bp GAGCAGGAAGATGTGCTGGGCGTCAATGGGAGCGAATaGTCTCCTAAAGAAAGGGGTTTGAGGGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: EQEDVLGVNGSE*SPKERGLRGAW
Trigger: CCAGGCACCCCTCAAACCCCTTTCTTTAGGAGAGCATTCGCTCCCATTGACGCCCAGCACATCTTCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS CCA 72 bp TCCTGCAGGTACCTGACTGGAAGGTTAAACTCCTGCTaGGCGGCTTCTAGGAACTGGGTGAGGGGCTCATCA +
Preference number: 6 (lower is better)
Translates to: SCRYLTGRLNSC*AASRNWVRGSS
Trigger: TGATGAGCCCCTCACCCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCCAGTCAGGTACCTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 27 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000455657.6
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682102.1
ENST00000682435.1
ENST00000682576.1
ENST00000683382.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683691.1
ENST00000683746.1
ENST00000683946.1
ENST00000684227.1
ENST00000684334.1
ENST00000684669.1
ENST00000684706.1
ENST00000684729.1
CDS CCA 72 bp TCTGGACTCGAGGTCAAGAATCCTGGTTCAGAGGGCTaGGGTGGAAGCCAAAGGTTAGGAATTGGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: SGLEVKNPGSEG*GGSQRLGIGAG
Trigger: GCCTGCCCCAATTCCTAACCTTTGGCTTCCACCCCAGCCCTCTGAACCAGGATTCTTGACCTCGAGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373917.7
ENST00000481170.1
ENST00000682340.1
ENST00000683106.1
ENST00000683382.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 72 bp GGCCCAAAGTCCAGAAACCAGTTTCAGTCTCAGCTGTaGGGCCCCAGGGCACTCACCACTCTGGGCTATTTT +
Preference number: 6 (lower is better)
Translates to: GPKSRNQFQSQL*GPRALTTLGYF
Trigger: AAAATAGCCCAGAGTGGTGAGTGCCCTGGGGCCCCACAGCTGAGACTGAAACTGGTTTCTGGACTTTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683106.1
CDS CAA 72 bp CGTCTGCACCCGAGCATGTGTGCGCCCAACTGTGTGTaGCTGTCTGTTCTGAAAGACGTCTCTGGGACACTC +
Preference number: 6 (lower is better)
Translates to: RLHPSMCAPNCV*LSVLKDVSGTL
Trigger: GAGTGTCCCAGAGACGTCTTTCAGAACAGACAGCAACACACAGTTGGGCGCACACATGCTCGGGTGCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000481170.1
ENST00000682058.1
ENST00000682340.1
ENST00000682435.1
ENST00000682443.1
ENST00000682481.1
ENST00000682576.1
ENST00000683106.1
ENST00000683131.1
ENST00000683382.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683626.1
ENST00000683746.1
ENST00000683864.1
ENST00000684227.1
ENST00000684242.1
ENST00000684334.1
ENST00000684562.1
ENST00000684729.1
CDS GCA 72 bp AATTCCTGCAGGTACCTGACTGGAAGGTTAAACTCCTaGTGGGCGGCTTCTAGGAACTGGGTGAGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: NSCRYLTGRLNS*WAASRNWVRGS
Trigger: TGAGCCCCTCACCCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCCAGTCAGGTACCTGCAGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 27 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000455657.6
ENST00000496536.2
ENST00000622191.2
ENST00000682058.1
ENST00000682102.1
ENST00000682435.1
ENST00000682576.1
ENST00000683382.1
ENST00000683402.1
ENST00000683591.1
ENST00000683598.1
ENST00000683617.1
ENST00000683691.1
ENST00000683746.1
ENST00000683946.1
ENST00000684227.1
ENST00000684334.1
ENST00000684669.1
ENST00000684706.1
ENST00000684729.1
CDS GCA 72 bp TGTGTGCACAAACACCTGACTGGAAGGTTAAACTCCTaGTGGGCGGCTTCTAGGAACTGGGTGAGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: CVHKHLTGRLNS*WAASRNWVRGS
Trigger: TGAGCCCCTCACCCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCCAGTCAGGTGTTTGTGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000635609.2
ENST00000682340.1
ENST00000682443.1
ENST00000683106.1
ENST00000683241.1
ENST00000683864.1
ENST00000684274.1
ENST00000684412.1
ENST00000684562.1
CDS CCA 72 bp GTGCACAAACACCTGACTGGAAGGTTAAACTCCTGCTaGGCGGCTTCTAGGAACTGGGTGAGGGGCTCATCA +
Preference number: 6 (lower is better)
Translates to: VHKHLTGRLNSC*AASRNWVRGSS
Trigger: TGATGAGCCCCTCACCCAGTTCCTAGAAGCCGCCCAGCAGGAGTTTAACCTTCCAGTCAGGTGTTTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000480506.6
ENST00000481170.1
ENST00000635609.2
ENST00000682340.1
ENST00000682443.1
ENST00000683106.1
ENST00000683241.1
ENST00000683864.1
ENST00000684274.1
ENST00000684412.1
ENST00000684562.1
CDS CCA 72 bp CCCAGGGCACTCACCACTCTGGGCTATTTTCTCCTCTaGACAATGAGGAATTTGGAGGAAGTCGGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: PRALTTLGYFLL*TMRNLEEVGGL
Trigger: CAGGCCTCCGACTTCCTCCAAATTCCTCATTGTCCAGAGGAGAAAATAGCCCAGAGTGGTGAGTGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683106.1
CDS CAA 72 bp CATTCCAGGGACCTGGGCACAGGCTTCAATATGGTGTaGGATCATAGGGACCCCACTAGCTCCCTTCACTCC +
Preference number: 6 (lower is better)
Translates to: HSRDLGTGFNMV*DHRDPTSSLHS
Trigger: GGAGTGAAGGGAGCTAGTGGGGTCCCTATGATCCAACACCATATTGAAGCCTGTGCCCAGGTCCCTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435316.6
CDS TCA 72 bp CACAAGCCTGGTGAGTCCTCCAATTGCCCATCCTGCTaGTTACGCTGGAAGACATCCCGAAGAGGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: HKPGESSNCPSC*LRWKTSRRGFK
Trigger: CTTGAAGCCTCTTCGGGATGTCTTCCAGCGTAATCAGCAGGATGGGCAATTGGAGGACTCACCAGGCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000313597.10
ENST00000341142.8
ENST00000358215.8
ENST00000373908.5
ENST00000373917.7
ENST00000435316.6
ENST00000443704.5
ENST00000622191.2
ENST00000682102.1
ENST00000683241.1
ENST00000683386.1
ENST00000683691.1
ENST00000683752.1
ENST00000683946.1
ENST00000684412.1
ENST00000684706.1
CDS CCA 72 bp TGGAGAGAAGCACACACCATAAGCCCTGGAGGGACTTaGAGGATCCCCAAACCCAACTCCCTTCTAGAACAG +
Preference number: 6 (lower is better)
Translates to: WREAHTISPGGT*RIPKPNSLLEQ
Trigger: CTGTTCTAGAAGGGAGTTGGGTTTGGGGATCCTCCAAGTCCCTCCAGGGCTTATGGTGTGTGCTTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683106.1
ENST00000684334.1
CDS CCA 72 bp TCCAAGCCGCAGAACCAGCAGCATCTATTGAGATCTTaGGGTCACACTTCCCCGACAACATACTGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: SKPQNQQHLLRS*GHTSPTTYWPP
Trigger: TGGAGGCCAGTATGTTGTCGGGGAAGTGTGACCCCAAGATCTCAATAGATGCTGCTGGTTCTGCGGCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS CAA 72 bp ATCCAAGCCGCAGAACCAGCAGCATCTATTGAGATCTaGGGGTCACACTTCCCCGACAACATACTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: IQAAEPAASIEI*GSHFPDNILAS
Trigger: GGAGGCCAGTATGTTGTCGGGGAAGTGTGACCCCAAGATCTCAATAGATGCTGCTGGTTCTGCGGCTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS TCA 72 bp AGGGGACCCAGCCTTCCATACCCTGCGGACTTGATCTaGCTCCAGATACCATCAGTGAGATGCACGTATATC +
Preference number: 6 (lower is better)
Translates to: RGPSLPYPADLI*LQIPSVRCTYI
Trigger: GATATACGTGCATCTCACTGATGGTATCTGGAGTCAGATCAAGTCCGCAGGGTATGGAAGGCTGGGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000682340.1
CDS CCA 72 bp CCTGCATTCCAGGGACCTGAGGACAAGGGAAGAGGCTaGGATGAAGAATATCTAATAGGAGGGGATGTTGGG +
Preference number: 6 (lower is better)
Translates to: PAFQGPEDKGRG*DEEYLIGGDVG
Trigger: CCCAACATCCCCTCCTATTAGATATTCTTCATCCCAGCCTCTTCCCTTGTCCTCAGGTCCCTGGAATGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683106.1
CDS CCA 72 bp AAGGGAAGAGGCTGGGCACAGGCTTCAATATGGTGTTaGATCATAGGGACCCCTGCCACAGGAAACAATGGT +
Preference number: 6 (lower is better)
Translates to: KGRGWAQASIWC*IIGTPATGNNG
Trigger: ACCATTGTTTCCTGTGGCAGGGGTCCCTATGATCCAACACCATATTGAAGCCTGTGCCCAGCCTCTTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635609.2
CDS CCA 72 bp TCTCAGTCATTCATATGTCTGGGACAGACAGCACCCTaGCCAGCTTGCATATCTGTGGCCACTTTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: SQSFICLGQTAP*PACISVATLLP
Trigger: GGGAAGCAAAGTGGCCACAGATATGCAAGCTGGCCAGGGTGCTGTCTGTCCCAGACATATGAATGACTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683946.1
CDS CAA 90 bp CCTACTCAGAGGATGATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTaGTGTGGCAGAACAATCGAGTTCAGGATGAGCACCTCAAAAGAC +
Preference number: 6 (lower is better)
Translates to: PTQRMIWLVKLRLSS*CGRTIEFRMSTSKD
Trigger: GTCTTTTGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATCATCCTCTGAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682488.1
CDS TCA 72 bp CGGACGACTGGGTCTAAATCTCTGGATTCGGAGGATTaGTTGATTGCTGACCCTCTGAACCCCACAACTGAC +
Preference number: 6 (lower is better)
Translates to: RTTGSKSLDSED*LIADPLNPTTD
Trigger: GTCAGTTGTGGGGTTCAGAGGGTCAGCAATCAATCAATCCTCCGAATCCAGAGATTTAGACCCAGTCGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000358215.8
ENST00000443704.5
ENST00000455657.6
ENST00000622191.2
ENST00000682102.1
ENST00000682443.1
ENST00000682576.1
ENST00000683131.1
ENST00000683402.1
ENST00000683598.1
ENST00000683691.1
ENST00000683752.1
ENST00000683946.1
CDS CCA 72 bp GATCTGGTTGGTGAAGCTTCGGCTCAGCTCCTTGTGTaGCAGAACAATCGAGTTCAGGATGAGCACCTCAAA +
Preference number: 6 (lower is better)
Translates to: DLVGEASAQLLV*QNNRVQDEHLK
Trigger: TTTGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGGAGCTGAGCCGAAGCTTCACCAACCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682488.1
CDS TCA 72 bp CATAACTTGAGGGGGCGCCATTCACATTGTCATCTGTaGATGATGGTCCTTGGAGTTATGCCTGGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: HNLRGRHSHCHL*MMVLGVMPGGK
Trigger: CTTCCCACCAGGCATAACTCCAAGGACCATCATTCACAGATGACAATGTGAATGGCGCCCCCTCAAGTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683203.1
ENST00000683964.1
CDS TCA 72 bp CAAGAATCCTGGTTCAGAGGGCCTGCGGACTTGATCTaGCTCCAGATACCATCAGTGAGATGCACGTATATC +
Preference number: 6 (lower is better)
Translates to: QESWFRGPADLI*LQIPSVRCTYI
Trigger: GATATACGTGCATCTCACTGATGGTATCTGGAGTCAGATCAAGTCCGCAGGCCCTCTGAACCAGGATTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682102.1
ENST00000682576.1
ENST00000683617.1
ENST00000684242.1
CDS CCA 72 bp TCATCTGTGAATGATGGTCCTTGGAGTTATGCCTGGTaGGAAGAGTTCATGGTTGGGAAAGGGGGAAACAGC +
Preference number: 6 (lower is better)
Translates to: SSVNDGPWSYAW*EEFMVGKGGNS
Trigger: GCTGTTTCCCCCTTTCCCAACCATGAACTCTTCCCACCAGGCATAACTCCAAGGACCATCATTCACAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683203.1
ENST00000683964.1
CDS CCA 72 bp GCGCCATTCACATTGTCATCTGTGAATGATGGTCCTTaGAGTTATGCCTGGTGGGAAGAGTTCATGGTTGGG +
Preference number: 6 (lower is better)
Translates to: APFTLSSVNDGP*SYAWWEEFMVG
Trigger: CCCAACCATGAACTCTTCCCACCAGGCATAACTCCAAGGACCATCATTCACAGATGACAATGTGAATGGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683203.1
ENST00000683964.1
CDS CCA 72 bp TCTAATAGGAGGGGATGTTGGGGAAATCCTTGGTGCTaGCCCAAAGTCCAGAAACCAGTTTCAGTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SNRRGCWGNPWC*PKVQKPVSVSA
Trigger: AGCTGAGACTGAAACTGGTTTCTGGACTTTGGGCCAGCACCAAGGATTTCCCCAACATCCCCTCCTATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683106.1
CDS CCA 72 bp GGATGTACACATTCCCTAGAAGCAGAAGAGAGGCCCTaGGGGCAAATATCCCAAACCGAATTTGATCAGGAA +
Preference number: 6 (lower is better)
Translates to: GCTHSLEAEERP*GQISQTEFDQE
Trigger: TTCCTGATCAAATTCGGTTTGGGATATTTGCCCCCAGGGCCTCTCTTCTGCTTCTAGGGAATGTGTACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000373917.7
ENST00000481170.1
ENST00000682102.1
ENST00000682340.1
ENST00000682576.1
ENST00000683106.1
ENST00000683382.1
ENST00000683617.1
ENST00000684242.1
ENST00000684334.1
ENST00000684412.1
CDS CCA 72 bp TTGTCATCTGTGAATGATGGTCCTTGGAGTTATGCCTaGTGGGAAGAGTTCATGGTTGGGAAAGGGGGAAAC +
Preference number: 6 (lower is better)
Translates to: LSSVNDGPWSYA*WEEFMVGKGGN
Trigger: GTTTCCCCCTTTCCCAACCATGAACTCTTCCCACCAGGCATAACTCCAAGGACCATCATTCACAGATGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683203.1
ENST00000683964.1
CDS GCA 72 bp ATATCTAATAGGAGGGGATGTTGGGGAAATCCTTGGTaGTGGCCCAAAGTCCAGAAACCAGTTTCAGTCTCA +
Preference number: 6 (lower is better)
Translates to: ISNRRGCWGNPW*WPKVQKPVSVS
Trigger: TGAGACTGAAACTGGTTTCTGGACTTTGGGCCAGCACCAAGGATTTCCCCAACATCCCCTCCTATTAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683106.1
CDS CCA 72 bp AGAATATCTAATAGGAGGGGATGTTGGGGAAATCCTTaGTGCTGGCCCAAAGTCCAGAAACCAGTTTCAGTC +
Preference number: 6 (lower is better)
Translates to: RISNRRGCWGNP*CWPKVQKPVSV
Trigger: GACTGAAACTGGTTTCTGGACTTTGGGCCAGCACCAAGGATTTCCCCAACATCCCCTCCTATTAGATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683106.1
CDS TCA 72 bp GTGTTATTTGTTGCAGACCTCACAGCAGGCAGAGACTaGATTCAAACCAAAACCTTGCCTGGCTCAATACGA +
Preference number: 6 (lower is better)
Translates to: VLFVADLTAGRD*IQTKTLPGSIR
Trigger: TCGTATTGAGCCAGGCAAGGTTTTGGTTTGAATTCAGTCTCTGCCTGCTGTGAGGTCTGCAACAAATAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1
CDS GCA 72 bp AAGGAAACTGAGTGTCAGAGAGGGTGTGTTATTTGTTaGAGACCTCACAGCAGGCAGAGACTGAATTCAAAC +
Preference number: 6 (lower is better)
Translates to: KETECQRGCVIC*RPHSRQRLNSN
Trigger: GTTTGAATTCAGTCTCTGCCTGCTGTGAGGTCTGCAACAAATAACACACCCTCTCTGACACTCAGTTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1
CDS CAA 90 bp CCTCACAGTGATTCCTCCCAAATTCTGAAATTCACACCCCACAATTaGATCTCTAAAAGACTTCCCTCTGGCCATGAACAAATTCTGCAA +
Preference number: 6 (lower is better)
Translates to: PHSDSSQILKFTPHN*ISKRLPSGHEQILQ
Trigger: TTGCAGAATTTGTTCATGGCCAGAGGGAAGTCTTTTAGAGATCAAATTGTGGGGTGTGAATTTCAGAATTTGGGAGGAATCACTGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683402.1
CDS TCA 72 bp TTTTTATTATCTGTCAGCCTAAGCTTGAGATCAGCATaGGGTAAGGGTACCATTTATCAAGGGTCTGCGTTG +
Preference number: 6 (lower is better)
Translates to: FLLSVSLSLRSA*GKGTIYQGSAL
Trigger: CAACGCAGACCCTTGATAAATGGTACCCTTACCTCATGCTGATCTCAAGCTTAGGCTGACAGATAATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481170.1
CDS TCA 72 bp ATGCTACGGCTTTACATTGTCTCCAAGATCCTTGCCTaGTCTCACATTCCACACTTTAAAAATAGGAGTGAA +
Preference number: 6 (lower is better)
Translates to: MLRLYIVSKILA*SHIPHFKNRSE
Trigger: TTCACTCCTATTTTTAAAGTGTGGAATGTGAGATCAGGCAAGGATCTTGGAGACAATGTAAAGCCGTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481170.1
ENST00000683203.1
ENST00000683964.1
CDS GCA 72 bp GAAATGAGCAACAATGTGATCAAGGATATGAATTTGTaGTTGGTTATCATTAAGAGTCTCCATGCTACGGCT +
Preference number: 6 (lower is better)
Translates to: EMSNNVIKDMNL*LVIIKSLHATA
Trigger: AGCCGTAGCATGGAGACTCTTAATGATAACCAAGCACAAATTCATATCCTTGATCACATTGTTGCTCATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1
CDS CAA 72 bp ATGAGCAACAATGTGATCAAGGATATGAATTTGTGCTaGGTTATCATTAAGAGTCTCCATGCTACGGCTTTA +
Preference number: 6 (lower is better)
Translates to: MSNNVIKDMNLC*VIIKSLHATAL
Trigger: TAAAGCCGTAGCATGGAGACTCTTAATGATAACCAAGCACAAATTCATATCCTTGATCACATTGTTGCTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1
CDS CAA 90 bp AATAAAGAAATGAGCAACAATGTGATCAAGGATATGAATTTGTGCTaGGTTATCATTAAGAGTCTCCATGCTACGGCTTTACATTGTCTC +
Preference number: 6 (lower is better)
Translates to: NKEMSNNVIKDMNLC*VIIKSLHATALHCL
Trigger: GAGACAATGTAAAGCCGTAGCATGGAGACTCTTAATGATAACCAAGCACAAATTCATATCCTTGATCACATTGTTGCTCATTTCTTTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1
CDS CAA 72 bp AAAGAAATGAGCAACAATGTGATCAAGGATATGAATTaGTGCTTGGTTATCATTAAGAGTCTCCATGCTACG +
Preference number: 6 (lower is better)
Translates to: KEMSNNVIKDMN*CLVIIKSLHAT
Trigger: CGTAGCATGGAGACTCTTAATGATAACCAAGCACAAATTCATATCCTTGATCACATTGTTGCTCATTTCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481170.1
ENST00000683203.1