RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLYAT (Homo sapiens)

Ensembl gene IDs: ENSG00000149124

Ensembl transcript IDs: ENST00000278400.3, ENST00000344743.8, ENST00000529732.5, ENST00000531084.1, ENST00000586098.1, ENST00000611865.4

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAACTCTCTGAGGATGTTTTGTTTTCAGCCCTGGGCAGCATTTGCTaGGCTGGGAGATTAGGAGGCATCATTTGGTGCCCAGTACTCACA +
Preference number: 1 (lower is better)
Translates to: KLSEDVLFSALGSIC*AGRLGGIIWCPVLT
Trigger: TGTGAGTACTGGGCACCAAATGATGCCTCCTAATCTCCCAGCTCAGCAAATGCTGCCCAGGGCTGAAAACAAAACATCCTCAGAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586098.1
3UTR CCA 90 bp GATGAGCTTGTGATGAAAGAGGAACAGAGTGAAGGTCAGAGCTGTTaGAGGAAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCC +
Preference number: 1 (lower is better)
Translates to: DELVMKEEQSEGQSC*RKKAGRAIKVQVVA
Trigger: GGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTTCCTCCAACAGCTCTGACCTTCACTCTGTTCCTCTTTCATCACAAGCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
3UTR TCA 90 bp AAATTGCTTATGTCAAATGTAAGAGGACCTGGGCCTGCTTCCCACTaGGAAACCTGTGAATGCAGGGACCATGGCGATGCTGTTGAACAT +
Preference number: 1 (lower is better)
Translates to: KLLMSNVRGPGPASH*ETCECRDHGDAVEH
Trigger: ATGTTCAACAGCATCGCCATGGTCCCTGCATTCACAGGTTTCTCAGTGGGAAGCAGGCCCAGGTCCTCTTACATTTGACATAAGCAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR TCA 90 bp TCACCTCTTCCTAGCTCCCAGAAAAACTGGCAAGGGTCTTGCAACTaGGGAACCAGGGATTCCAGGAGAAGTAATTTGGAGCAATATGTA +
Preference number: 1 (lower is better)
Translates to: SPLPSSQKNWQGSCN*GTRDSRRSNLEQYV
Trigger: TACATATTGCTCCAAATTACTTCTCCTGGAATCCCTGGTTCCTCAGTTGCAAGACCCTTGCCAGTTTTTCTGGGAGCTAGGAAGAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR TCA 90 bp GCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATTCTAGATaGGAAGGGAGATGGTGGAGTCTTTTAAGCAGGAGAGAAACATGT +
Preference number: 1 (lower is better)
Translates to: AIKVQVVARGLVYSR*EGRWWSLLSRRETC
Trigger: ACATGTTTCTCTCCTGCTTAAAAGACTCCACCATCTCCCTTCTCATCTAGAATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
3UTR GCA 90 bp AACTCCTATCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTaGTCCCACCTTCACCTTTTCATACACTCATTCCTTTCATGCTGT +
Preference number: 1 (lower is better)
Translates to: NSYLSSINHHIPGSR*SHLHLFIHSFLSCC
Trigger: ACAGCATGAAAGGAATGAGTGTATGAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR CCA 90 bp AAGGGTCTTGCAACTGAGGAACCAGGGATTCCAGGAGAAGTAATTTaGAGCAATATGTATCTGATGAAGTGTCATAGAGGTCCTGGAAAT +
Preference number: 1 (lower is better)
Translates to: KGLATEEPGIPGEVI*SNMYLMKCHRGPGN
Trigger: ATTTCCAGGACCTCTATGACACTTCATCAGATACATATTGCTCCAAATTACTTCTCCTGGAATCCCTGGTTCCTCAGTTGCAAGACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR CAA 90 bp AGCCCTGGGCAGCATTTGCTGAGCTGGGAGATTAGGAGGCATCATTaGGTGCCCAGTACTCACATCCCCCAATTGTTCAGAGGCAGTGTA +
Preference number: 2 (lower is better)
Translates to: SPGQHLLSWEIRRHH*VPSTHIPQLFRGSV
Trigger: TACACTGCCTCTGAACAATTGGGGGATGTGAGTACTGGGCACCAAATGATGCCTCCTAATCTCCCAGCTCAGCAAATGCTGCCCAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
3UTR-3UTR TCA 90 bp TGTGCTGAGGCTAATTGGACAAGCAGGTGTTCATGCTGTCTCCTCTCCCTTCAAGGGCCTGCTTCCCACTaGGAAACCTGTGAATGCAGG +
Preference number: 2 (lower is better)
Translates to: CAEANWTSRCSCCLLSLQGPASH*ETCECR
Trigger: CCTGCATTCACAGGTTTCTCAGTGGGAAGCAGGCCC...TTGAAGGGAGAGGAGACAGCATGAACACCTGCTTGTCCAATTAGCCTCAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR-3UTR TCA 90 bp TCCTATCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCCACCTTCCACTGAGAAACCTGTaGATGCAGGGACCATGGCGA +
Preference number: 2 (lower is better)
Translates to: SYLSSINHHIPGSRCSHLPLRNL*MQGPWR
Trigger: TCGCCATGGTCCCTGCATTCACAGGTTTCTCAGTGG...AAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR-3UTR TCA 90 bp CTAATTGGACAAGCAGGTGTTCATGCTGTCTCCTCTCCCTTCAACTCCTATCTCCCACTGAGAAACCTGTaGATGCAGGGACCATGGCGA +
Preference number: 2 (lower is better)
Translates to: LIGQAGVHAVSSPFNSYLPLRNL*MQGPWR
Trigger: TCGCCATGGTCCCTGCATTCACAGGTTTCTCAGTGG...GAGATAGGAGTTGAAGGGAGAGGAGACAGCATGAACACCTGCTTGTCCAATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR CAA 90 bp GAGATTAGGAGGCATCATTTGGTGCCCAGTACTCACATCCCCCAATaGTTCAGAGGCAGTGTAAGGACGATGCAGGCAAGACAGTCTTCA +
Preference number: 2 (lower is better)
Translates to: EIRRHHLVPSTHIPQ*FRGSVRTMQARQSS
Trigger: TGAAGACTGTCTTGCCTGCATCGTCCTTACACTGCCTCTGAACAATTGGGGGATGTGAGTACTGGGCACCAAATGATGCCTCCTAATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
3UTR-3UTR TCA 90 bp GAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATTCGTAGGAAAGCCAGAGTaGATGCAGGGAGAGAAGTTG +
Preference number: 2 (lower is better)
Translates to: ESRKGNKGPSGSQRPGLFVGKPE*MQGEKL
Trigger: CAACTTCTCTCCCTGCATTCACTCTGGCTTTCCTAC...GAATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
3UTR-3UTR GCA 90 bp AAGGACAAGATACCAACAGGAGGAGGGCAAGGAAAACTCTCTGAGGATGTTTTGGGAGGCATCATTTGGTaGCCAGTACTCACATCCCCC +
Preference number: 2 (lower is better)
Translates to: KDKIPTGGGQGKLSEDVLGGIIW*PVLTSP
Trigger: GGGGGATGTGAGTACTGGGCACCAAATGATGCCTCC...CAAAACATCCTCAGAGAGTTTTCCTTGCCCTCCTCCTGTTGGTATCTTGTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586098.1
3UTR-3UTR GCA 90 bp TGTGCTGAGGCTAATTGGACAAGCAGGTGTTCATGCTGTCTCCTCTCCCTTCAATTATACGCCCAGACCTaGCCAACACTGTCTTATGTT +
Preference number: 2 (lower is better)
Translates to: CAEANWTSRCSCCLLSLQLYAQT*PTLSYV
Trigger: AACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAA...TTGAAGGGAGAGGAGACAGCATGAACACCTGCTTGTCCAATTAGCCTCAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR-3UTR TCA 90 bp TTTGTATTTGCTGTGACCTCTATTGTCTTGAGAGACAGAGTAGACAGAAGAAATGTCCTGGAATATAGATaGGCTTGTGATGAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: FVFAVTSIVLRDRVDRRNVLEYR*ACDERG
Trigger: TCCTCTTTCATCACAAGCTCATCTATATTCCAGGAC...ATTTCTTCTGTCTACTCTGTCTCTCAAGACAATAGAGGTCACAGCAAATACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
3UTR CAA 90 bp AATAAGTTCAGACTGTTATTTATGAATTACCCAGTCTCAGGTATTTaGTTACAGCAGGAACAAACTGAGATTAGTAATGTGCTGAGGCTA +
Preference number: 2 (lower is better)
Translates to: NKFRLLFMNYPVSGI*LQQEQTEISNVLRL
Trigger: TAGCCTCAGCACATTACTAATCTCAGTTTGTTCCTGCTGTAACAAAATACCTGAGACTGGGTAATTCATAAATAACAGTCTGAACTTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR-3UTR CAA 90 bp CTAATTGGACAAGCAGGTGTTCATGCTGTCTCCTCTCCCTTCAACTCCTATCTCAAACTGGCAAGGGTCTaGCAACTGAGGAACCAGGGA +
Preference number: 3 (lower is better)
Translates to: LIGQAGVHAVSSPFNSYLKLARV*QLRNQG
Trigger: TCCCTGGTTCCTCAGTTGCAAGACCCTTGCCAGTTT...GAGATAGGAGTTGAAGGGAGAGGAGACAGCATGAACACCTGCTTGTCCAATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR TCA 72 bp CCTAGCTCCCAGAAAAACTGGCAAGGGTCTTGCAACTaGGGAACCAGGGATTCCAGGAGAAGTAATTTGGAG +
Preference number: 3 (lower is better)
Translates to: PSSQKNWQGSCN*GTRDSRRSNLE
Trigger: CTCCAAATTACTTCTCCTGGAATCCCTGGTTCCTCAGTTGCAAGACCCTTGCCAGTTTTTCTGGGAGCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR-3UTR CAA 90 bp AAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATATGCAGGGAGAGAAGTaGGGAGGTTACTTGAGAGGT +
Preference number: 3 (lower is better)
Translates to: KKAGRAIKVQVVARGLVYMQGEK*GGYLRG
Trigger: ACCTCTCAAGTAACCTCCCAACTTCTCTCCCTGCAT...ATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
3UTR TCA 72 bp GTCCAAGTGGTAGCCAGAGGCCTGGTTTATTCTAGATaGGAAGGGAGATGGTGGAGTCTTTTAAGCAGGAGA +
Preference number: 3 (lower is better)
Translates to: VQVVARGLVYSR*EGRWWSLLSRR
Trigger: TCTCCTGCTTAAAAGACTCCACCATCTCCCTTCTCATCTAGAATAAACCAGGCCTCTGGCTACCACTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
3UTR GCA 72 bp CTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTaGTCCCACCTTCACCTTTTCATACACTCATTCCTT +
Preference number: 3 (lower is better)
Translates to: LSSINHHIPGSR*SHLHLFIHSFL
Trigger: AAGGAATGAGTGTATGAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR CCA 72 bp CAACTCCTATCTCTCCTCAATAAACCATCACATCCCTaGGTCAAGGTGCTCCCACCTTCACCTTTTCATACA +
Preference number: 3 (lower is better)
Translates to: QLLSLLNKPSHP*VKVLPPSPFHT
Trigger: TGTATGAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAGGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR CCA 72 bp GCAACTGAGGAACCAGGGATTCCAGGAGAAGTAATTTaGAGCAATATGTATCTGATGAAGTGTCATAGAGGT +
Preference number: 3 (lower is better)
Translates to: ATEEPGIPGEVI*SNMYLMKCHRG
Trigger: ACCTCTATGACACTTCATCAGATACATATTGCTCCAAATTACTTCTCCTGGAATCCCTGGTTCCTCAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR-3UTR CAA 90 bp ATTCTGATTTCTTTGTACAACATTGATTGTAGGAAAGCCAGAGTGAATGCAGGGAAGTTGGGAGGTTACTaGAGAGGTGTGAGTGGTATA +
Preference number: 3 (lower is better)
Translates to: ILISLYNIDCRKARVNAGKLGGY*RGVSGI
Trigger: TATACCACTCACACCTCTCAAGTAACCTCCCAACTT...CCCTGCATTCACTCTGGCTTTCCTACAATCAATGTTGTACAAAGAAATCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
3UTR-3UTR CAA 90 bp AATTTAATTCACCTCTTCCTAGCTCCCAGAAAAACTGGCAAGGGTCTTGCAACTATGTGGGGAGGTAAATaGCTTATGTCAAATGTAAGA +
Preference number: 3 (lower is better)
Translates to: NLIHLFLAPRKTGKGLATMWGGK*LMSNVR
Trigger: TCTTACATTTGACATAAGCAATTTACCTCCCCACAT...AGTTGCAAGACCCTTGCCAGTTTTTCTGGGAGCTAGGAAGAGGTGAATTAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
3UTR-3UTR CAA 90 bp GTCTCAGGTATTTTGTTACAGCAGGAACAAACTGAGATTAGTAATGTGCTGAGGTCCAGGAGAAGTAATTaGGAGCAATATGTATCTGAT +
Preference number: 3 (lower is better)
Translates to: VSGILLQQEQTEISNVLRSRRSN*EQYVSD
Trigger: ATCAGATACATATTGCTCCAAATTACTTCTCCTGGA...CCTCAGCACATTACTAATCTCAGTTTGTTCCTGCTGTAACAAAATACCTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp GTAAGGACGATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCAAGTCCTCATGTCTGGGCAGCATTTGCTaGGCTGGGAGATTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VRTMQARQSSESDAKSSCLGSIC*AGRLGG
Trigger: GCCTCCTAATCTCCCAGCTCAGCAAATGCTGCCCAG...ACATGAGGACTTGGCATCTGACTCTGAAGACTGTCTTGCCTGCATCGTCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR TCA 90 bp GAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATTCTCCGGGAAGAAACGATaGGCAACACCCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ESRKGNKGPSGSQRPGLFSGKKR*ATPFWE
Trigger: CTCCCAGAAGGGTGTTGCTCATCGTTTCTTCCCGGA...GAATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp TTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACGGGCCTGCTTCCCACTaGGAAACCTGTGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: FFSSTIHSSNYTPRPAQHGPASH*ETCECR
Trigger: CCTGCATTCACAGGTTTCTCAGTGGGAAGCAGGCCC...GTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp TCATTTGGTGCCCAGTACTCACATCCCCCAATTGTTCAGAGGCAGTGTAAGGACGGAGGCATCATTTGGTaGCCAGTACTCACATCCCCC +
Preference number: 4 (lower is better)
Translates to: SFGAQYSHPPIVQRQCKDGGIIW*PVLTSP
Trigger: GGGGGATGTGAGTACTGGGCACCAAATGATGCCTCC...GTCCTTACACTGCCTCTGAACAATTGGGGGATGTGAGTACTGGGCACCAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CCA 90 bp TTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTACGTCACAAGGCCATaGAGCCGGTATTCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: FIHHPLLKLYAQTCPTLSYVTRP*SRYSGK
Trigger: CTTGCCGGAATACCGGCTCCATGGCCTTGTGACGTA...AGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp ACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCCCATGGCGATGCTGTTaGACATCACACTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TIHSSNYTPRPAQHCLMFPWRCC*TSHCFP
Trigger: GGGGAAGCAGTGTGATGTTCAACAGCATCGCCATGG...GAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp ATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGCCACTGAGAAACCTGTaGATGCAGGGACCATGGCGA +
Preference number: 4 (lower is better)
Translates to: IHSSNYTPRPAQHCLMFRPLRNL*MQGPWR
Trigger: TCGCCATGGTCCCTGCATTCACAGGTTTCTCAGTGG...CCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp TTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACAGGGCCTGCTTCCCACTaGGAAACCTGTGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: FLFIHHPLLKLYAQTCPTGPASH*ETCECR
Trigger: CCTGCATTCACAGGTTTCTCAGTGGGAAGCAGGCCC...TGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp ATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATCAAGGGTCTTGCAACTaGGGAACCAGGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: IHHPLLKLYAQTCPTLSYQGSCN*GTRDSR
Trigger: CCTGGAATCCCTGGTTCCTCAGTTGCAAGACCCTTG...ATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp GGCAGTGTAAGGACGATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCAAGTCCGATCATGGCAAACTCTaGGACAAAAACCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GSVRTMQARQSSESDAKSDHGKL*DKNLQW
Trigger: CCACTGCAGGTTTTTGTCTCAGAGTTTGCCATGATC...GGACTTGGCATCTGACTCTGAAGACTGTCTTGCCTGCATCGTCCTTACACTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR GCA 90 bp AGCTGTTGGAGGAAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGATTTCTCCAGCATCTaGAGCATCTGGGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: SCWRKKAGRAIKVQVVARDFSSI*SIWAPC
Trigger: GCAAGGTGCCCAGATGCTGCAGATGCTGGAGAAATC...TCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTTCCTCCAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR GCA 90 bp TTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCGATTTCTCCAGCATCTaGAGCATCTGGGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: FHPPSTPQIIRPDLPNTVDFSSI*SIWAPC
Trigger: GCAAGGTGCCCAGATGCTGCAGATGCTGGAGAAATC...GACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp TCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTGATTTCTCCAGCATCTaGAGCATCTGGGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: SSTIHSSNYTPRPAQHCLDFSSI*SIWAPC
Trigger: GCAAGGTGCCCAGATGCTGCAGATGCTGGAGAAATC...AAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp TCCTATCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCCACCTTGGTATTCCGGCAAGGTaGCTGCCATTCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SYLSSINHHIPGSRCSHLGIPAR*LPFSSL
Trigger: GAGAGATGAGAATGGCAGGCACCTTGCCGGAATACC...AAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp CCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTCAGGAAACCCAAGTTTaGCCAATTTCTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PPSTPQIIRPDLPNTVLCQETQV*PISGRG
Trigger: CCCACGCCCAGAAATTGGGCAAACTTGGGTTTCCTG...ACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp CATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTACAGGAAACCCAAGTTTaGCCAATTTCTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: HPPSTPQIIRPDLPNTVLQETQV*PISGRG
Trigger: CCCACGCCCAGAAATTGGGCAAACTTGGGTTTCCTG...TAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp TTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTAAGAGGACCTGGGCCTaGTTCCCACTGAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: FSSTIHSSNYTPRPAQHCKRTWA*FPLRNL
Trigger: CAGGTTTCTCAGTGGGAAGCAGGCCCAGGTCCTCTT...ACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp CTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGAAGAGGACCTGGGCCTaGTTCCCACTGAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: LLKLYAQTCPTLSYVQDWKRTWA*FPLRNL
Trigger: CAGGTTTCTCAGTGGGAAGCAGGCCCAGGTCCTCTT...CCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp CCCTGGGTCAAGGTGCTCCCACCTTCACCTTTTCATACACTCATTCCTTTCATGATCCCTGGGTCAAGGTaGTCCCACCTTCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: PWVKVLPPSPFHTLIPFMIPGSR*SHLHLF
Trigger: GAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGGAT...CATGAAAGGAATGAGTGTATGAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp ACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCTACGTCACAAGGCCATaGAGCCGGTATTCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: TIHSSNYTPRPAQHCLMFYVTRP*SRYSGK
Trigger: CTTGCCGGAATACCGGCTCCATGGCCTTGTGACGTA...GAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
3UTR CAA 72 bp AGGCATCATTTGGTGCCCAGTACTCACATCCCCCAATaGTTCAGAGGCAGTGTAAGGACGATGCAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RHHLVPSTHIPQ*FRGSVRTMQAR
Trigger: TCTTGCCTGCATCGTCCTTACACTGCCTCTGAACAATTGGGGGATGTGAGTACTGGGCACCAAATGATGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR TCA 90 bp AGCTGTTGGAGGAAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGACACCCTTCTGGGAGATaGAATTTCTCCCTGATGCAG +
Preference number: 4 (lower is better)
Translates to: SCWRKKAGRAIKVQVVARHPSGR*NFSLMQ
Trigger: CTGCATCAGGGAGAAATTTCATCTCCCAGAAGGGTG...TCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTTCCTCCAACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp TCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTCAGGTGGGAAAGGTCTaGATGCAGCGCTCAATGAAT +
Preference number: 4 (lower is better)
Translates to: SSTIHSSNYTPRPAQHCLQVGKV*MQRSMN
Trigger: ATTCATTGAGCGCTGCATTCAGACCTTTCCCACCTG...AAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp TTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACCATGGCGATGCTGTTaGACATCACACTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FLFIHHPLLKLYAQTCPTPWRCC*TSHCFP
Trigger: GGGGAAGCAGTGTGATGTTCAACAGCATCGCCATGG...TGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp CATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTTCTCCAGCATCTaGAGCATCTGGGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: HPLLKLYAQTCPTLSYVQDFSSI*SIWAPC
Trigger: GCAAGGTGCCCAGATGCTGCAGATGCTGGAGAAATC...CTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp TTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTTTCCGGCAAGGTGCCTaGCATTCTCATCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FSSTIHSSNYTPRPAQHCFRQGA*HSHLSS
Trigger: ACTGGAGAGATGAGAATGGCAGGCACCTTGCCGGAA...ACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp ATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGGTATTCCGGCAAGGTaGCTGCCATTCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: IHHPLLKLYAQTCPTLSYGIPAR*LPFSSL
Trigger: GAGAGATGAGAATGGCAGGCACCTTGCCGGAATACC...ATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp CTAATTGGACAAGCAGGTGTTCATGCTGTCTCCTCTCCCTTCAACTCCTATCTCGGTATTCCGGCAAGGTaGCTGCCATTCTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: LIGQAGVHAVSSPFNSYLGIPAR*LPFSSL
Trigger: GAGAGATGAGAATGGCAGGCACCTTGCCGGAATACC...GAGATAGGAGTTGAAGGGAGAGGAGACAGCATGAACACCTGCTTGTCCAATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp CTAATTGGACAAGCAGGTGTTCATGCTGTCTCCTCTCCCTTCAACTCCTATCTCATCCCTGGGTCAAGGTaGTCCCACCTTCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: LIGQAGVHAVSSPFNSYLIPGSR*SHLHLF
Trigger: GAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGGAT...GAGATAGGAGTTGAAGGGAGAGGAGACAGCATGAACACCTGCTTGTCCAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp GAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATTCAGCATCTGCAGCATCTaGGCACCTTGCAATGGTAAC +
Preference number: 4 (lower is better)
Translates to: ESRKGNKGPSGSQRPGLFSICSI*APCNGN
Trigger: GTTACCATTGCAAGGTGCCCAGATGCTGCAGATGCT...GAATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CCA 90 bp TCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCCACCTTCACCTTCCAGCTTCTGGGAATaGGAACATGTTGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SLLNKPSHPWVKVLPPSPSSFWE*EHVAVC
Trigger: ACACACTGCAACATGTTCCCATTCCCAGAAGCTGGA...AGGTGAAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp TTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTGGTACACAGTTCCACTaGTTCCAGCTTCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: FIHHPLLKLYAQTCPTLSGTQFH*FQLLGM
Trigger: CATTCCCAGAAGCTGGAACCAGTGGAACTGTGTACC...AGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp CTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGAAATGTAAGAGGACCTaGGCCTGCTTCCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: LFIHHPLLKLYAQTCPTLKCKRT*ACFPLR
Trigger: TCTCAGTGGGAAGCAGGCCCAGGTCCTCTTACATTT...CAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp CCCCAATTGTTCAGAGGCAGTGTAAGGACGATGCAGGCAAGACAGTCTTCAGAGTTAGGAGGCATCATTTaGTGCCCAGTACTCACATCC +
Preference number: 4 (lower is better)
Translates to: PQLFRGSVRTMQARQSSELGGII*CPVLTS
Trigger: GGATGTGAGTACTGGGCACCAAATGATGCCTCCTAA...CTCTGAAGACTGTCTTGCCTGCATCGTCCTTACACTGCCTCTGAACAATTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CCA 90 bp GTTCAGAGGCAGTGTAAGGACGATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCAGCATTTGCTGAGCTaGGAGATTAGGAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: VQRQCKDDAGKTVFRVRCQHLLS*EIRRHH
Trigger: ATGATGCCTCCTAATCTCCCAGCTCAGCAAATGCTG...GCATCTGACTCTGAAGACTGTCTTGCCTGCATCGTCCTTACACTGCCTCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586098.1
3UTR CAA 72 bp CAGCATTTGCTGAGCTGGGAGATTAGGAGGCATCATTaGGTGCCCAGTACTCACATCCCCCAATTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: QHLLSWEIRRHH*VPSTHIPQLFR
Trigger: TCTGAACAATTGGGGGATGTGAGTACTGGGCACCAAATGATGCCTCCTAATCTCCCAGCTCAGCAAATGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR TCA 90 bp TTCAGAGGCAGTGTAAGGACGATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCGATCCAAGGAATTCCTaGCAGTTTTGGGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: FRGSVRTMQARQSSESDADPRNS*QFWGSL
Trigger: CAAAGATCCCCAAAACTGTCAGGAATTCCTTGGATC...GGCATCTGACTCTGAAGACTGTCTTGCCTGCATCGTCCTTACACTGCCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR TCA 90 bp CCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGCACAGGTGGGAAAGGTCTaGATGCAGCGCTCAATGAAT +
Preference number: 4 (lower is better)
Translates to: PQIIRPDLPNTVLCSGLAQVGKV*MQRSMN
Trigger: ATTCATTGAGCGCTGCATTCAGACCTTTCCCACCTG...TGCCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp ATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCAAGTCCTCATGTGACCTTAGAAGTATTCCCATCTCCTaGAGGACAGCTGGGATCATG +
Preference number: 4 (lower is better)
Translates to: MQARQSSESDAKSSCDLRSIPIS*RTAGIM
Trigger: CATGATCCCAGCTGTCCTTCAGGAGATGGGAATACT...TCTAAGGTCACATGAGGACTTGGCATCTGACTCTGAAGACTGTCTTGCCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR GCA 90 bp ATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACCAGGAAACCCAAGTTTaGCCAATTTCTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: ISFHPPSTPQIIRPDLPNQETQV*PISGRG
Trigger: CCCACGCCCAGAAATTGGGCAAACTTGGGTTTCCTG...GTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp ACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGCATCTGCAGCATCTaGGCACCTTGCAATGGTAAC +
Preference number: 4 (lower is better)
Translates to: TIHSSNYTPRPAQHCLMFSICSI*APCNGN
Trigger: GTTACCATTGCAAGGTGCCCAGATGCTGCAGATGCT...GAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp CTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGACTGGTTCCAGCTTCTaGGAATGGGAACATGTTGCA +
Preference number: 4 (lower is better)
Translates to: LFIHHPLLKLYAQTCPTLTGSSF*EWEHVA
Trigger: TGCAACATGTTCCCATTCCCAGAAGCTGGAACCAGT...CAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp TCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTTGTGCTGAGGCTAATTaGACAAGCAGGTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SSTIHSSNYTPRPAQHCLCAEAN*TSRCSC
Trigger: GCATGAACACCTGCTTGTCCAATTAGCCTCAGCACA...AAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp CATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTGCTGAGGCTAATTaGACAAGCAGGTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: HPPSTPQIIRPDLPNTVLCAEAN*TSRCSC
Trigger: GCATGAACACCTGCTTGTCCAATTAGCCTCAGCACA...TAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp ACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGCACCCTTCTGGGAGATaGAATTTCTCCCTGATGCAG +
Preference number: 4 (lower is better)
Translates to: TPQIIRPDLPNTVLCSGLHPSGR*NFSLMQ
Trigger: CTGCATCAGGGAGAAATTTCATCTCCCAGAAGGGTG...CAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344743.8
CDS-3UTR TCA 90 bp TATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAAGTCATATCCTGCTCCTaGGGGCAGACAACCACTGTA +
Preference number: 4 (lower is better)
Translates to: YFFSSTIHSSNYTPRPAQVISCS*GQTTTV
Trigger: TACAGTGGTTGTCTGCCCTCAGGAGCAGGATATGAC...TTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp TTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAGTCATATCCTGCTCCTaGGGGCAGACAACCACTGTA +
Preference number: 4 (lower is better)
Translates to: LFLFIHHPLLKLYAQTCPVISCS*GQTTTV
Trigger: TACAGTGGTTGTCTGCCCTCAGGAGCAGGATATGAC...TGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp CTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGGTTGATGAGTTCTGGTaGTCCAAGGAATTCCTGACA +
Preference number: 4 (lower is better)
Translates to: LFIHHPLLKLYAQTCPTLVDEFW*SKEFLT
Trigger: TGTCAGGAATTCCTTGGATCACCAGAACTCATCAAC...CAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp TCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTGTTGATGAGTTCTGGTaGTCCAAGGAATTCCTGACA +
Preference number: 4 (lower is better)
Translates to: SSTIHSSNYTPRPAQHCLVDEFW*SKEFLT
Trigger: TGTCAGGAATTCCTTGGATCACCAGAACTCATCAAC...AAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp CCCTGGGTCAAGGTGCTCCCACCTTCACCTTTTCATACACTCATTCCTTTCATGAAGGAGTCAGTTCCTTaGCTGTTTCAGCTGCCATAT +
Preference number: 4 (lower is better)
Translates to: PWVKVLPPSPFHTLIPFMKESVP*LFQLPY
Trigger: ATATGGCAGCTGAAACAGCCAAGGAACTGACTCCTT...CATGAAAGGAATGAGTGTATGAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp CTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGAAGGAGTCAGTTCCTTaGCTGTTTCAGCTGCCATAT +
Preference number: 4 (lower is better)
Translates to: LFIHHPLLKLYAQTCPTLKESVP*LFQLPY
Trigger: ATATGGCAGCTGAAACAGCCAAGGAACTGACTCCTT...CAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp CCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTCCAGCTTCTGGGAATaGGAACATGTTGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PLLKLYAQTCPTLSYVQDSSFWE*EHVAVC
Trigger: ACACACTGCAACATGTTCCCATTCCCAGAAGCTGGA...ATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp ACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGAAATGTAAGAGGACCTaGGCCTGCTTCCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: TPQIIRPDLPNTVLCSGLKCKRT*ACFPLR
Trigger: TCTCAGTGGGAAGCAGGCCCAGGTCCTCTTACATTT...CAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp TCCTATCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCCACCTTCCACAGCCTTCAGATTaGATGGATTTCCATGGTTTA +
Preference number: 4 (lower is better)
Translates to: SYLSSINHHIPGSRCSHLPQPSD*MDFHGL
Trigger: TAAACCATGGAAATCCATTCAATCTGAAGGCTGTGG...AAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp CCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGCAGATCCAAGGAATTCCTaGCAGTTTTGGGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: PQIIRPDLPNTVLCSGLADPRNS*QFWGSL
Trigger: CAAAGATCCCCAAAACTGTCAGGAATTCCTTGGATC...TGCCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp ACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCGTTGATGAGTTCTGGTaGTCCAAGGAATTCCTGACA +
Preference number: 4 (lower is better)
Translates to: TIHSSNYTPRPAQHCLMFVDEFW*SKEFLT
Trigger: TGTCAGGAATTCCTTGGATCACCAGAACTCATCAAC...GAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp TCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCCACCTTCACCTCTAGGCTGTGAACTTTaGATCTGTAAATGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLLNKPSHPWVKVLPPSPLGCEL*ICKCCF
Trigger: GAAACAGCATTTACAGATTCAAAGTTCACAGCCTAG...AGGTGAAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp GTCTCAGGTATTTTGTTACAGCAGGAACAAACTGAGATTAGTAATGTGCTGAGGCCACTGAGAAACCTGTaGATGCAGGGACCATGGCGA +
Preference number: 4 (lower is better)
Translates to: VSGILLQQEQTEISNVLRPLRNL*MQGPWR
Trigger: TCGCCATGGTCCCTGCATTCACAGGTTTCTCAGTGG...CCTCAGCACATTACTAATCTCAGTTTGTTCCTGCTGTAACAAAATACCTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp TTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTTTATACGCCCAGACCTaGCCAACACTGTCTTATGTT +
Preference number: 4 (lower is better)
Translates to: FSSTIHSSNYTPRPAQHCLYAQT*PTLSYV
Trigger: AACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAA...ACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp AATGCAGGGAGAGAAGTTGGGAGGTTACTTGAGAGGTGTGAGTGGTATAGACTGAAGGAGTCAGTTCCTTaGCTGTTTCAGCTGCCATAT +
Preference number: 4 (lower is better)
Translates to: NAGREVGRLLERCEWYRLKESVP*LFQLPY
Trigger: ATATGGCAGCTGAAACAGCCAAGGAACTGACTCCTT...CAGTCTATACCACTCACACCTCTCAAGTAACCTCCCAACTTCTCTCCCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CCA 90 bp GAAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTAATCTCTTGGTTGCTATaGAGGGTCCAAGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: EESRKGNKGPSGSQRPGLISWLL*RVQEEN
Trigger: GTTTTCTTCTTGGACCCTCCATAGCAACCAAGAGAT...TAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CCA 90 bp ATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCGGTACACAGTTCCACTaGTTCCAGCTTCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: IISFHPPSTPQIIRPDLPGTQFH*FQLLGM
Trigger: CATTCCCAGAAGCTGGAACCAGTGGAACTGTGTACC...GGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
3UTR CAA 72 bp AGTGTCATAGAGGTCCTGGAAATGTGGGGAGGTAAATaGCTTATGTCAAATGTAAGAGGACCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SVIEVLEMWGGK*LMSNVRGPGPA
Trigger: AGCAGGCCCAGGTCCTCTTACATTTGACATAAGCAATTTACCTCCCCACATTTCCAGGACCTCTATGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp AAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATCCACAGCCTTCAGATTaGATGGATTTCCATGGTTTA +
Preference number: 4 (lower is better)
Translates to: KKAGRAIKVQVVARGLVYPQPSD*MDFHGL
Trigger: TAAACCATGGAAATCCATTCAATCTGAAGGCTGTGG...ATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp TCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTCCACAGCCTTCAGATTaGATGGATTTCCATGGTTTA +
Preference number: 4 (lower is better)
Translates to: SFHPPSTPQIIRPDLPNTPQPSD*MDFHGL
Trigger: TAAACCATGGAAATCCATTCAATCTGAAGGCTGTGG...AGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp GGAGAAGTAATTTGGAGCAATATGTATCTGATGAAGTGTCATAGAGGTCCTGGAGTCATATCCTGCTCCTaGGGGCAGACAACCACTGTA +
Preference number: 4 (lower is better)
Translates to: GEVIWSNMYLMKCHRGPGVISCS*GQTTTV
Trigger: TACAGTGGTTGTCTGCCCTCAGGAGCAGGATATGAC...TCCAGGACCTCTATGACACTTCATCAGATACATATTGCTCCAAATTACTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp GAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATTCGGTAACATCCATGGATaGGAGTTTAAACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: ESRKGNKGPSGSQRPGLFGNIHG*EFKHLL
Trigger: CAAGAGATGTTTAAACTCTCATCCATGGATGTTACC...GAATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp TGTGCTGAGGCTAATTGGACAAGCAGGTGTTCATGCTGTCTCCTCTCCCTTCAAGGTAACATCCATGGATaGGAGTTTAAACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: CAEANWTSRCSCCLLSLQGNIHG*EFKHLL
Trigger: CAAGAGATGTTTAAACTCTCATCCATGGATGTTACC...TTGAAGGGAGAGGAGACAGCATGAACACCTGCTTGTCCAATTAGCCTCAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp TCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGAATTTATTCACCAAGTaGGCATGGGTAACATCCATG +
Preference number: 4 (lower is better)
Translates to: STIHSSNYTPRPAQHCLMNLFTK*AWVTSM
Trigger: CATGGATGTTACCCATGCTCACTTGGTGAATAAATT...CATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp GAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATTCGAAGGACTTAATGGCTaGAAGATTTTGTATAGCCTC +
Preference number: 4 (lower is better)
Translates to: ESRKGNKGPSGSQRPGLFEGLNG*KILYSL
Trigger: GAGGCTATACAAAATCTTGCAGCCATTAAGTCCTTC...GAATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR GCA 90 bp CACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTCTTGGCTGTTTCAGCTaGCATATAGAGAATGCGTTG +
Preference number: 4 (lower is better)
Translates to: HSSNYTPRPAQHCLMFRILGCFS*HIENAL
Trigger: CAACGCATTCTCTATATGGCAGCTGAAACAGCCAAG...AATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp GGAGAAGTAATTTGGAGCAATATGTATCTGATGAAGTGTCATAGAGGTCCTGGATTCCGGCAAGGTGCCTaGCATTCTCATCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GEVIWSNMYLMKCHRGPGFRQGA*HSHLSS
Trigger: ACTGGAGAGATGAGAATGGCAGGCACCTTGCCGGAA...TCCAGGACCTCTATGACACTTCATCAGATACATATTGCTCCAAATTACTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp GGCAGTGTAAGGACGATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCAAGTCCTCTCTAGGTAATTTCTaGAACCTTCCAACAAGTATT +
Preference number: 4 (lower is better)
Translates to: GSVRTMQARQSSESDAKSSLGNF*NLPTSI
Trigger: AATACTTGTTGGAAGGTTGCAGAAATTACCTAGAGA...GGACTTGGCATCTGACTCTGAAGACTGTCTTGCCTGCATCGTCCTTACACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CCA 90 bp CCTGCTGAGGAGAGTCCACTTGTTGATCATAAGGGAAAGGCTTTAGAAAGAAAGTCCAGCTTCTGGGAATaGGAACATGTTGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PAEESPLVDHKGKALERKSSFWE*EHVAVC
Trigger: ACACACTGCAACATGTTCCCATTCCCAGAAGCTGGA...CTTTCTTTCTAAAGCCTTTCCCTTATGATCAACAAGTGGACTCTCCTCAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp TCATTTGGTGCCCAGTACTCACATCCCCCAATTGTTCAGAGGCAGTGTAAGGACGACAAAAACCTGCAGTaGCTCGTTGTTTATAGCATT +
Preference number: 4 (lower is better)
Translates to: SFGAQYSHPPIVQRQCKDDKNLQ*LVVYSI
Trigger: AATGCTATAAACAACGAGCCACTGCAGGTTTTTGTC...GTCCTTACACTGCCTCTGAACAATTGGGGGATGTGAGTACTGGGCACCAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR TCA 90 bp CAGAGTCCAAACAGTGCCCACTCCTTTACTGCTGATTACAATTTATTATTTCTTTCCGGGAAGAAACGATaGGCAACACCCTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QSPNSAHSFTADYNLLFLSGKKR*ATPFWE
Trigger: CTCCCAGAAGGGTGTTGCTCATCGTTTCTTCCCGGA...AAGAAATAATAAATTGTAATCAGCAGTAAAGGAGTGGGCACTGTTTGGACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344743.8
CDS-3UTR TCA 90 bp TATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAAGATCCAAGGAATTCCTaGCAGTTTTGGGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: YFFSSTIHSSNYTPRPAQDPRNS*QFWGSL
Trigger: CAAAGATCCCCAAAACTGTCAGGAATTCCTTGGATC...TTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp ATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGCTAGGCTGTGAACTTTaGATCTGTAAATGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IHSSNYTPRPAQHCLMFRLGCEL*ICKCCF
Trigger: GAAACAGCATTTACAGATTCAAAGTTCACAGCCTAG...CCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp TCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGCCTAGGCTGTGAACTTTaGATCTGTAAATGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSNYTPRPAQHCLMFRIGLGCEL*ICKCCF
Trigger: GAAACAGCATTTACAGATTCAAAGTTCACAGCCTAG...GCCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp ATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGGTAACATCCATGGATaGGAGTTTAAACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: IHHPLLKLYAQTCPTLSYGNIHG*EFKHLL
Trigger: CAAGAGATGTTTAAACTCTCATCCATGGATGTTACC...ATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp TCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGCGGTAACATCCATGGATaGGAGTTTAAACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSNYTPRPAQHCLMFRIGGNIHG*EFKHLL
Trigger: CAAGAGATGTTTAAACTCTCATCCATGGATGTTACC...GCCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp AAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATAATTTATTCACCAAGTaGGCATGGGTAACATCCATG +
Preference number: 4 (lower is better)
Translates to: KKAGRAIKVQVVARGLVYNLFTK*AWVTSM
Trigger: CATGGATGTTACCCATGCTCACTTGGTGAATAAATT...ATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp CCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAAATTTATTCACCAAGTaGGCATGGGTAACATCCATG +
Preference number: 4 (lower is better)
Translates to: PSTPQIIRPDLPNTVLCSNLFTK*AWVTSM
Trigger: CATGGATGTTACCCATGCTCACTTGGTGAATAAATT...TGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp GGAGAAGTAATTTGGAGCAATATGTATCTGATGAAGTGTCATAGAGGTCCTGGACAGGTGGGAAAGGTCTaGATGCAGCGCTCAATGAAT +
Preference number: 4 (lower is better)
Translates to: GEVIWSNMYLMKCHRGPGQVGKV*MQRSMN
Trigger: ATTCATTGAGCGCTGCATTCAGACCTTTCCCACCTG...TCCAGGACCTCTATGACACTTCATCAGATACATATTGCTCCAAATTACTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp ATTTATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTCAAGGGTCTTGCAACTaGGGAACCAGGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: IYYFFSSTIHSSNYTPRPQGSCN*GTRDSR
Trigger: CCTGGAATCCCTGGTTCCTCAGTTGCAAGACCCTTG...AGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp ATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCCTTGGCTGTTTCAGCTaGCATATAGAGAATGCGTTG +
Preference number: 4 (lower is better)
Translates to: IISFHPPSTPQIIRPDLPLGCFS*HIENAL
Trigger: CAACGCATTCTCTATATGGCAGCTGAAACAGCCAAG...GGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR GCA 90 bp CCTGCTGAGGAGAGTCCACTTGTTGATCATAAGGGAAAGGCTTTAGAAAGAAAGTTATACGCCCAGACCTaGCCAACACTGTCTTATGTT +
Preference number: 4 (lower is better)
Translates to: PAEESPLVDHKGKALERKLYAQT*PTLSYV
Trigger: AACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAA...CTTTCTTTCTAAAGCCTTTCCCTTATGATCAACAAGTGGACTCTCCTCAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp ATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCAAGTCCTCATGTGACCTTAGATCTGAGACAAAAACCTaGAGTGGCTCGTTGTTTATA +
Preference number: 4 (lower is better)
Translates to: MQARQSSESDAKSSCDLRSETKT*SGSLFI
Trigger: TATAAACAACGAGCCACTGCAGGTTTTTGTCTCAGA...TCTAAGGTCACATGAGGACTTGGCATCTGACTCTGAAGACTGTCTTGCCTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CCA 90 bp TTACAGCAGGAACAAACTGAGATTAGTAATGTGCTGAGGCTAATTGGACAAGCAAGCATCTGCAGCATCTaGGCACCTTGCAATGGTAAC +
Preference number: 4 (lower is better)
Translates to: LQQEQTEISNVLRLIGQASICSI*APCNGN
Trigger: GTTACCATTGCAAGGTGCCCAGATGCTGCAGATGCT...TGCTTGTCCAATTAGCCTCAGCACATTACTAATCTCAGTTTGTTCCTGCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp GAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATTCAGCCTTCAGATTGAATaGATTTCCATGGTTTATGTG +
Preference number: 4 (lower is better)
Translates to: ESRKGNKGPSGSQRPGLFSLQIE*ISMVYV
Trigger: CACATAAACCATGGAAATCCATTCAATCTGAAGGCT...GAATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CCA 90 bp TCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTTGGGTTTGCCACCATTaGGAGATAAAATCTTTGATT +
Preference number: 4 (lower is better)
Translates to: SSTIHSSNYTPRPAQHCLWVCHH*EIKSLI
Trigger: AATCAAAGATTTTATCTCCCAATGGTGGCAAACCCA...AAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp CCCTGGGTCAAGGTGCTCCCACCTTCACCTTTTCATACACTCATTCCTTTCATGTGGGTTTGCCACCATTaGGAGATAAAATCTTTGATT +
Preference number: 4 (lower is better)
Translates to: PWVKVLPPSPFHTLIPFMWVCHH*EIKSLI
Trigger: AATCAAAGATTTTATCTCCCAATGGTGGCAAACCCA...CATGAAAGGAATGAGTGTATGAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp TCCTATCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCCACCTTCCAGGAGAAGTAATTTaGAGCAATATGTATCTGATG +
Preference number: 4 (lower is better)
Translates to: SYLSSINHHIPGSRCSHLPGEVI*SNMYLM
Trigger: CATCAGATACATATTGCTCCAAATTACTTCTCCTGG...AAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp CCCTGGGTCAAGGTGCTCCCACCTTCACCTTTTCATACACTCATTCCTTTCATGAGGAGTTGTGGGTTTTaGAAGCTCATCTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PWVKVLPPSPFHTLIPFMRSCGF*KLIFRK
Trigger: TTTTCTAAAGATGAGCTTCCAAAACCCACAACTCCT...CATGAAAGGAATGAGTGTATGAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp TTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCACCACAGCCTTCAGATTaGATGGATTTCCATGGTTTA +
Preference number: 4 (lower is better)
Translates to: LFLFIHHPLLKLYAQTCPPQPSD*MDFHGL
Trigger: TAAACCATGGAAATCCATTCAATCTGAAGGCTGTGG...TGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR TCA 90 bp TTTGTATTTGCTGTGACCTCTATTGTCTTGAGAGACAGAGTAGACAGAAGAAATGTCATATCCTGCTCCTaGGGGCAGACAACCACTGTA +
Preference number: 4 (lower is better)
Translates to: FVFAVTSIVLRDRVDRRNVISCS*GQTTTV
Trigger: TACAGTGGTTGTCTGCCCTCAGGAGCAGGATATGAC...ATTTCTTCTGTCTACTCTGTCTCTCAAGACAATAGAGGTCACAGCAAATACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp TTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTTCAGACTGTTATTTATaGATTACCCAGTCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: FSSTIHSSNYTPRPAQHCSDCYL*ITQSQV
Trigger: TACCTGAGACTGGGTAATTCATAAATAACAGTCTGA...ACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp TTTATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGAGCATCTGCAGCATCTaGGCACCTTGCAATGGTAAC +
Preference number: 4 (lower is better)
Translates to: FIISFHPPSTPQIIRPDLSICSI*APCNGN
Trigger: GTTACCATTGCAAGGTGCCCAGATGCTGCAGATGCT...CAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp ATTCTGATTTCTTTGTACAACATTGATTGTAGGAAAGCCAGAGTGAATGCAGGGAAACTCACATGGCCTTaGGTTTGCCACCATTGGGAG +
Preference number: 4 (lower is better)
Translates to: ILISLYNIDCRKARVNAGKLTWP*VCHHWE
Trigger: CTCCCAATGGTGGCAAACCCAAGGCCATGTGAGTTT...CCCTGCATTCACTCTGGCTTTCCTACAATCAATGTTGTACAAAGAAATCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CCA 90 bp AATGCAGGGAGAGAAGTTGGGAGGTTACTTGAGAGGTGTGAGTGGTATAGACTGACAAATGTGAAGTCCTaGAATATAGATGAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: NAGREVGRLLERCEWYRLTNVKS*NIDELV
Trigger: CACAAGCTCATCTATATTCCAGGACTTCACATTTGT...CAGTCTATACCACTCACACCTCTCAAGTAACCTCCCAACTTCTCTCCCTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CCA 90 bp GTCTCAGGTATTTTGTTACAGCAGGAACAAACTGAGATTAGTAATGTGCTGAGGACTGGTTCCAGCTTCTaGGAATGGGAACATGTTGCA +
Preference number: 4 (lower is better)
Translates to: VSGILLQQEQTEISNVLRTGSSF*EWEHVA
Trigger: TGCAACATGTTCCCATTCCCAGAAGCTGGAACCAGT...CCTCAGCACATTACTAATCTCAGTTTGTTCCTGCTGTAACAAAATACCTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp CCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATCCAGGAGAAGTAATTTaGAGCAATATGTATCTGATG +
Preference number: 4 (lower is better)
Translates to: PLLKLYAQTCPTLSYVQDPGEVI*SNMYLM
Trigger: CATCAGATACATATTGCTCCAAATTACTTCTCCTGG...ATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp GGAGAAGTAATTTGGAGCAATATGTATCTGATGAAGTGTCATAGAGGTCCTGGAGATCCAAGGAATTCCTaGCAGTTTTGGGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: GEVIWSNMYLMKCHRGPGDPRNS*QFWGSL
Trigger: CAAAGATCCCCAAAACTGTCAGGAATTCCTTGGATC...TCCAGGACCTCTATGACACTTCATCAGATACATATTGCTCCAAATTACTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp ATGCCAAGTCCTCATGTGACCTTAGAAAAGAAGTGTGACTTCCATCGTTATATGGTTGATGAGTTCTGGTaGTCCAAGGAATTCCTGACA +
Preference number: 4 (lower is better)
Translates to: MPSPHVTLEKKCDFHRYMVDEFW*SKEFLT
Trigger: TGTCAGGAATTCCTTGGATCACCAGAACTCATCAAC...CATATAACGATGGAAGTCACACTTCTTTTCTAAGGTCACATGAGGACTTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR TCA 90 bp TTTGTATTTGCTGTGACCTCTATTGTCTTGAGAGACAGAGTAGACAGAAGAAATGTAGGAAAGCCAGAGTaGATGCAGGGAGAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: FVFAVTSIVLRDRVDRRNVGKPE*MQGEKL
Trigger: CAACTTCTCTCCCTGCATTCACTCTGGCTTTCCTAC...ATTTCTTCTGTCTACTCTGTCTCTCAAGACAATAGAGGTCACAGCAAATACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp TTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACATCAGACTGTTATTTATaGATTACCCAGTCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: FLFIHHPLLKLYAQTCPTSDCYL*ITQSQV
Trigger: TACCTGAGACTGGGTAATTCATAAATAACAGTCTGA...TGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp GTCTCAGGTATTTTGTTACAGCAGGAACAAACTGAGATTAGTAATGTGCTGAGGCTTGGCTGTTTCAGCTaGCATATAGAGAATGCGTTG +
Preference number: 4 (lower is better)
Translates to: VSGILLQQEQTEISNVLRLGCFS*HIENAL
Trigger: CAACGCATTCTCTATATGGCAGCTGAAACAGCCAAG...CCTCAGCACATTACTAATCTCAGTTTGTTCCTGCTGTAACAAAATACCTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp TTTGTATTTGCTGTGACCTCTATTGTCTTGAGAGACAGAGTAGACAGAAGAAATGAAGGTCAGAGCTGTTaGAGGAAGAAAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FVFAVTSIVLRDRVDRRNEGQSC*RKKAGR
Trigger: CCTTCCTGCTTTCTTCCTCCAACAGCTCTGACCTTC...ATTTCTTCTGTCTACTCTGTCTCTCAAGACAATAGAGGTCACAGCAAATACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CCA 90 bp TTTATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGACTGGTTCCAGCTTCTaGGAATGGGAACATGTTGCA +
Preference number: 4 (lower is better)
Translates to: FIISFHPPSTPQIIRPDLTGSSF*EWEHVA
Trigger: TGCAACATGTTCCCATTCCCAGAAGCTGGAACCAGT...CAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp CAGAGTCCAAACAGTGCCCACTCCTTTACTGCTGATTACAATTTATTATTTCTTGGTACACAGTTCCACTaGTTCCAGCTTCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: QSPNSAHSFTADYNLLFLGTQFH*FQLLGM
Trigger: CATTCCCAGAAGCTGGAACCAGTGGAACTGTGTACC...AAGAAATAATAAATTGTAATCAGCAGTAAAGGAGTGGGCACTGTTTGGACTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp TTTATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGTTATACGCCCAGACCTaGCCAACACTGTCTTATGTT +
Preference number: 4 (lower is better)
Translates to: FIISFHPPSTPQIIRPDLLYAQT*PTLSYV
Trigger: AACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAA...CAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp CCTGCTGAGGAGAGTCCACTTGTTGATCATAAGGGAAAGGCTTTAGAAAGAAAGTGGGTTTGCCACCATTaGGAGATAAAATCTTTGATT +
Preference number: 4 (lower is better)
Translates to: PAEESPLVDHKGKALERKWVCHH*EIKSLI
Trigger: AATCAAAGATTTTATCTCCCAATGGTGGCAAACCCA...CTTTCTTTCTAAAGCCTTTCCCTTATGATCAACAAGTGGACTCTCCTCAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CCA 90 bp CCTGCTGAGGAGAGTCCACTTGTTGATCATAAGGGAAAGGCTTTAGAAAGAAAGAGGAGTTGTGGGTTTTaGAAGCTCATCTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PAEESPLVDHKGKALERKRSCGF*KLIFRK
Trigger: TTTTCTAAAGATGAGCTTCCAAAACCCACAACTCCT...CTTTCTTTCTAAAGCCTTTCCCTTATGATCAACAAGTGGACTCTCCTCAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR TCA 90 bp TTTGTATTTGCTGTGACCTCTATTGTCTTGAGAGACAGAGTAGACAGAAGAAATGATCCAAGGAATTCCTaGCAGTTTTGGGGATCTTTG +
Preference number: 4 (lower is better)
Translates to: FVFAVTSIVLRDRVDRRNDPRNS*QFWGSL
Trigger: CAAAGATCCCCAAAACTGTCAGGAATTCCTTGGATC...ATTTCTTCTGTCTACTCTGTCTCTCAAGACAATAGAGGTCACAGCAAATACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp GTCTCAGGTATTTTGTTACAGCAGGAACAAACTGAGATTAGTAATGTGCTGAGGAATTTATTCACCAAGTaGGCATGGGTAACATCCATG +
Preference number: 4 (lower is better)
Translates to: VSGILLQQEQTEISNVLRNLFTK*AWVTSM
Trigger: CATGGATGTTACCCATGCTCACTTGGTGAATAAATT...CCTCAGCACATTACTAATCTCAGTTTGTTCCTGCTGTAACAAAATACCTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR GCA 90 bp TTTGTATTTGCTGTGACCTCTATTGTCTTGAGAGACAGAGTAGACAGAAGAAATACATGGCCTTGGGTTTaGCACCATTGGGAGATAAAA +
Preference number: 4 (lower is better)
Translates to: FVFAVTSIVLRDRVDRRNTWPWV*HHWEIK
Trigger: TTTTATCTCCCAATGGTGGCAAACCCAAGGCCATGT...ATTTCTTCTGTCTACTCTGTCTCTCAAGACAATAGAGGTCACAGCAAATACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CCA 90 bp ATTTATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTAAGGAGTCAGTTCCTTaGCTGTTTCAGCTGCCATAT +
Preference number: 4 (lower is better)
Translates to: IYYFFSSTIHSSNYTPRPKESVP*LFQLPY
Trigger: ATATGGCAGCTGAAACAGCCAAGGAACTGACTCCTT...AGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CCA 90 bp ATTCTGATTTCTTTGTACAACATTGATTGTAGGAAAGCCAGAGTGAATGCAGGGTTTATCAAACTCACATaGCCTTGGGTTTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: ILISLYNIDCRKARVNAGFIKLT*PWVCHH
Trigger: ATGGTGGCAAACCCAAGGCCATGTGAGTTTGATAAA...CCCTGCATTCACTCTGGCTTTCCTACAATCAATGTTGTACAAAGAAATCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp GAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGGAAGTTGATGAGTTCTGGTaGTCCAAGGAATTCCTGACA +
Preference number: 4 (lower is better)
Translates to: EITNVKSWNIDELVMKEEVDEFW*SKEFLT
Trigger: TGTCAGGAATTCCTTGGATCACCAGAACTCATCAAC...TTCCTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp ATGCCAAGTCCTCATGTGACCTTAGAAAAGAAGTGTGACTTCCATCGTTATATGCTCCCAATTAAGCTTTaGATCTGTAAATGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: MPSPHVTLEKKCDFHRYMLPIKL*ICKCCF
Trigger: GAAACAGCATTTACAGATTCAAAGCTTAATTGGGAG...CATATAACGATGGAAGTCACACTTCTTTTCTAAGGTCACATGAGGACTTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR GCA 90 bp GAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGGAACTTGGCTGTTTCAGCTaGCATATAGAGAATGCGTTG +
Preference number: 4 (lower is better)
Translates to: EITNVKSWNIDELVMKEELGCFS*HIENAL
Trigger: CAACGCATTCTCTATATGGCAGCTGAAACAGCCAAG...TTCCTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp GAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGGAATCGCAGAGTAAATTTTaGTACACCACCTCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: EITNVKSWNIDELVMKEESQSKF*YTTSRN
Trigger: ATTTCTGGAGGTGGTGTATCAAAATTTACTCTGCGA...TTCCTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR TCA 90 bp GAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGGAACTAGGCTGTGAACTTTaGATCTGTAAATGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: EITNVKSWNIDELVMKEELGCEL*ICKCCF
Trigger: GAAACAGCATTTACAGATTCAAAGTTCACAGCCTAG...TTCCTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CCA 90 bp GAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGGAATGGGTTTGCCACCATTaGGAGATAAAATCTTTGATT +
Preference number: 4 (lower is better)
Translates to: EITNVKSWNIDELVMKEEWVCHH*EIKSLI
Trigger: AATCAAAGATTTTATCTCCCAATGGTGGCAAACCCA...TTCCTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS TCA 90 bp AGACAGGAAACCCAAGTTTGCCCAATTTCTGGGCGTGGGAATAGATaGCATACGTCACAAGGCCATGGAGCCGGTATTCCGGCAAGGTGC +
Preference number: 5 (lower is better)
Translates to: RQETQVCPISGRGNR*HTSQGHGAGIPARC
Trigger: GCACCTTGCCGGAATACCGGCTCCATGGCCTTGTGACGTATGTCATCTATTCCCACGCCCAGAAATTGGGCAAACTTGGGTTTCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp ATTAGGAGGCATCATTTGGTGCCCAGTACTCACATCCCCCAATTGTTCAGAGGCAGCCCTGGGCAGCATTaGCTGAGCTGGGAGATTAGG +
Preference number: 5 (lower is better)
Translates to: IRRHHLVPSTHIPQLFRGSPGQH*LSWEIR
Trigger: CCTAATCTCCCAGCTCAGCAAATGCTGCCCAGGGCT...GCCTCTGAACAATTGGGGGATGTGAGTACTGGGCACCAAATGATGCCTCCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CAA 90 bp GGCAGTGTAAGGACGATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCAAGTCCCTCTCTGAGGATGTTTaGTTTTCAGCCCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GSVRTMQARQSSESDAKSLSEDV*FSALGS
Trigger: GCTGCCCAGGGCTGAAAACAAAACATCCTCAGAGAG...GGACTTGGCATCTGACTCTGAAGACTGTCTTGCCTGCATCGTCCTTACACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CAA 90 bp GTTCAGAGGCAGTGTAAGGACGATGCAGGCAAGACAGTCTTCAGAGTCAGATGCACCTGCAGTGGCTCGTaGTTTATAGCATTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: VQRQCKDDAGKTVFRVRCTCSGS*FIALAP
Trigger: GGGAGCCAATGCTATAAACAACGAGCCACTGCAGGT...GCATCTGACTCTGAAGACTGTCTTGCCTGCATCGTCCTTACACTGCCTCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS CCA 90 bp GCTGGGAGGCTCTTCCTCAAGGATTTCTCCAGCATCTGCAGCATCTaGGCACCTTGCAATGGTAACATCATGGAGGATACCTTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: AGRLFLKDFSSICSI*APCNGNIMEDTLAD
Trigger: ATCAGCTAAGGTATCCTCCATGATGTTACCATTGCAAGGTGCCCAGATGCTGCAGATGCTGGAGAAATCCTTGAGGAAGAGCCTCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529732.5
CDS-3UTR CAA 90 bp AGCTGTTGGAGGAAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGACAAACTCACATGGCCTaGGGTTTGCCACCATTGGGA +
Preference number: 5 (lower is better)
Translates to: SCWRKKAGRAIKVQVVARQTHMA*GLPPLG
Trigger: TCCCAATGGTGGCAAACCCAAGGCCATGTGAGTTTG...TCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTTCCTCCAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp TTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTACAGGAAACCCAAGTTaGCCCAATTTCTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: FIHHPLLKLYAQTCPTLSTGNPS*PNFWAW
Trigger: CCACGCCCAGAAATTGGGCAAACTTGGGTTTCCTGT...AGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp CCCTGGGTCAAGGTGCTCCCACCTTCACCTTTTCATACACTCATTCCTTTCATGAAACTGGCAAGGGTCTaGCAACTGAGGAACCAGGGA +
Preference number: 5 (lower is better)
Translates to: PWVKVLPPSPFHTLIPFMKLARV*QLRNQG
Trigger: TCCCTGGTTCCTCAGTTGCAAGACCCTTGCCAGTTT...CATGAAAGGAATGAGTGTATGAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp TTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTCTTGGTTGATGGCCTaGGGTTTGCCACCATTGGGA +
Preference number: 5 (lower is better)
Translates to: FFSSTIHSSNYTPRPAQHSWLMA*GLPPLG
Trigger: TCCCAATGGTGGCAAACCCAAGGCCATCAACCAAGA...GTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp CTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGTCTTGGTTGATGGCCTaGGGTTTGCCACCATTGGGA +
Preference number: 5 (lower is better)
Translates to: LLKLYAQTCPTLSYVQDWSWLMA*GLPPLG
Trigger: TCCCAATGGTGGCAAACCCAAGGCCATCAACCAAGA...CCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp CTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGACAGGAAACCCAAGTTaGCCCAATTTCTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: LLKLYAQTCPTLSYVQDWTGNPS*PNFWAW
Trigger: CCACGCCCAGAAATTGGGCAAACTTGGGTTTCCTGT...CCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp ATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATACAGGAAACCCAAGTTaGCCCAATTTCTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: IHHPLLKLYAQTCPTLSYTGNPS*PNFWAW
Trigger: CCACGCCCAGAAATTGGGCAAACTTGGGTTTCCTGT...ATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TTCAGAGGCAGTGTAAGGACGATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCATTAGGAGGCATCATTaGGTGCCCAGTACTCACATC +
Preference number: 5 (lower is better)
Translates to: FRGSVRTMQARQSSESDAIRRHH*VPSTHI
Trigger: GATGTGAGTACTGGGCACCAAATGATGCCTCCTAAT...GGCATCTGACTCTGAAGACTGTCTTGCCTGCATCGTCCTTACACTGCCTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CAA 90 bp TTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTGATGGCCTTGGGTTaGCCACCATTGGGAGATAAA +
Preference number: 5 (lower is better)
Translates to: FHPPSTPQIIRPDLPNTVLMALG*PPLGDK
Trigger: TTTATCTCCCAATGGTGGCAAACCCAAGGCCATCAA...GACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACAAAACTGGCAAGGGTCTaGCAACTGAGGAACCAGGGA +
Preference number: 5 (lower is better)
Translates to: FLFIHHPLLKLYAQTCPTKLARV*QLRNQG
Trigger: TCCCTGGTTCCTCAGTTGCAAGACCCTTGCCAGTTT...TGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp TCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCCACCTTCACCTTCCTGGAATAGGAGCTaGGAGAGGATAGGATATCAT +
Preference number: 5 (lower is better)
Translates to: SLLNKPSHPWVKVLPPSPSWNRS*ERIGYH
Trigger: ATGATATCCTATCCTCTCCAAGCTCCTATTCCAGGA...AGGTGAAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp ATGCAGGCAAGACAGTCTTCAGAGTCAGATGCCAAGTCCTCATGTGACCTTAGAACTCACATCCCCCAATaGTTCAGAGGCAGTGTAAGG +
Preference number: 5 (lower is better)
Translates to: MQARQSSESDAKSSCDLRTHIPQ*FRGSVR
Trigger: CCTTACACTGCCTCTGAACAATTGGGGGATGTGAGT...TCTAAGGTCACATGAGGACTTGGCATCTGACTCTGAAGACTGTCTTGCCTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS TCA 90 bp AAGTATTCCCATCTCCTGAAGGACAGCTGGGATCATGGCAAACTCTaGGACAAAAACCTGCAGTGGCTCGTTGTTTATAGCATTGGCTCC +
Preference number: 5 (lower is better)
Translates to: KYSHLLKDSWDHGKL*DKNLQWLVVYSIGS
Trigger: GGAGCCAATGCTATAAACAACGAGCCACTGCAGGTTTTTGTCTCAGAGTTTGCCATGATCCCAGCTGTCCTTCAGGAGATGGGAATACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CAA 90 bp CACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTAAAGGAGTCAGTTCCTaGGCTGTTTCAGCTGCCATA +
Preference number: 5 (lower is better)
Translates to: HHPLLKLYAQTCPTLSYVKGVSS*AVSAAI
Trigger: TATGGCAGCTGAAACAGCCAAGGAACTGACTCCTTT...AACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTAAAGGAGTCAGTTCCTaGGCTGTTTCAGCTGCCATA +
Preference number: 5 (lower is better)
Translates to: FSSTIHSSNYTPRPAQHCKGVSS*AVSAAI
Trigger: TATGGCAGCTGAAACAGCCAAGGAACTGACTCCTTT...ACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp ATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGAAAGGAGTCAGTTCCTaGGCTGTTTCAGCTGCCATA +
Preference number: 5 (lower is better)
Translates to: IHSSNYTPRPAQHCLMFRKGVSS*AVSAAI
Trigger: TATGGCAGCTGAAACAGCCAAGGAACTGACTCCTTT...CCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TTCAACTCCTATCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCTTGATGGCCTTGGGTTaGCCACCATTGGGAGATAAA +
Preference number: 5 (lower is better)
Translates to: FNSYLSSINHHIPGSRCSLMALG*PPLGDK
Trigger: TTTATCTCCCAATGGTGGCAAACCCAAGGCCATCAA...GGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAGGAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp CCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGCACTGAGGAGAGTCCACTaGTTGATCATAAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: PQIIRPDLPNTVLCSGLALRRVH*LIIRER
Trigger: CCTTTCCCTTATGATCAACAAGTGGACTCTCCTCAG...TGCCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp TTCAACTCCTATCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCCTGAGGAGAGTCCACTaGTTGATCATAAGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: FNSYLSSINHHIPGSRCSLRRVH*LIIRER
Trigger: CCTTTCCCTTATGATCAACAAGTGGACTCTCCTCAG...GGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAGGAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp TTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTCCTGGAATAGGAGCTaGGAGAGGATAGGATATCAT +
Preference number: 5 (lower is better)
Translates to: FIHHPLLKLYAQTCPTLSSWNRS*ERIGYH
Trigger: ATGATATCCTATCCTCTCCAAGCTCCTATTCCAGGA...AGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp ACTCACATCCCCCAATTGTTCAGAGGCAGTGTAAGGACGATGCAGGCAAGACAGATGGTGGTGAATCATTaGCTGACAAGGACAAGATAC +
Preference number: 5 (lower is better)
Translates to: THIPQLFRGSVRTMQARQMVVNH*LTRTRY
Trigger: GTATCTTGTCCTTGTCAGCAAATGATTCACCACCAT...CTGTCTTGCCTGCATCGTCCTTACACTGCCTCTGAACAATTGGGGGATGTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS GCA 90 bp CTCTTCCTCAAGGATTTCTCCAGCATCTGCAGCATCTGGGCACCTTaGAATGGTAACATCATGGAGGATACCTTAGCTGATGGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: LFLKDFSSICSIWAP*NGNIMEDTLADGSF
Trigger: AAAACTTCCATCAGCTAAGGTATCCTCCATGATGTTACCATTGCAAGGTGCCCAGATGCTGCAGATGCTGGAGAAATCCTTGAGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529732.5
CDS CCA 90 bp GTGAATGCAGGGAGAGAAGTTGGGAGGTTACTTGAGAGGTGTGAGTaGTATAGACTGGATTTTATCAAACTCACATGGCCTTGGGTTTGC +
Preference number: 5 (lower is better)
Translates to: VNAGREVGRLLERCE*YRLDFIKLTWPWVC
Trigger: GCAAACCCAAGGCCATGTGAGTTTGATAAAATCCAGTCTATACCACTCACACCTCTCAAGTAACCTCCCAACTTCTCTCCCTGCATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp TCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGACCACAGCCTTCAGATaGAATGGATTTCCATGGTTT +
Preference number: 5 (lower is better)
Translates to: STIHSSNYTPRPAQHCLMTTAFR*NGFPWF
Trigger: AAACCATGGAAATCCATTCAATCTGAAGGCTGTGGT...CATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp GAAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTAAAATGCTGTTTCCAGTaGATGAGTTCTGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: EESRKGNKGPSGSQRPGLKCCFQ*MSSGDP
Trigger: TGGATCACCAGAACTCATCAACTGGAAACAGCATTT...TAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp CCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTAAATGCTGTTTCCAGTaGATGAGTTCTGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: PPSTPQIIRPDLPNTVLCKCCFQ*MSSGDP
Trigger: TGGATCACCAGAACTCATCAACTGGAAACAGCATTT...ACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TCATTTGGTGCCCAGTACTCACATCCCCCAATTGTTCAGAGGCAGTGTAAGGACAAATGCTGTTTCCAGTaGATGAGTTCTGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: SFGAQYSHPPIVQRQCKDKCCFQ*MSSGDP
Trigger: TGGATCACCAGAACTCATCAACTGGAAACAGCATTT...GTCCTTACACTGCCTCTGAACAATTGGGGGATGTGAGTACTGGGCACCAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CAA 90 bp GAAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTAAATGGCTGCAAGATTTaGTATAGCCTCATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: EESRKGNKGPSGSQRPGLNGCKI*YSLIQA
Trigger: AGCCTGAATGAGGCTATACAAAATCTTGCAGCCATT...TAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp AATGCAGGGAGAGAAGTTGGGAGGTTACTTGAGAGGTGTGAGTGGTATAGACTGAAGTTGGGAGGTTACTaGAGAGGTGTGAGTGGTATA +
Preference number: 5 (lower is better)
Translates to: NAGREVGRLLERCEWYRLKLGGY*RGVSGI
Trigger: TATACCACTCACACCTCTCAAGTAACCTCCCAACTT...CAGTCTATACCACTCACACCTCTCAAGTAACCTCCCAACTTCTCTCCCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp ATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACTTGATGGCCTTGGGTTaGCCACCATTGGGAGATAAA +
Preference number: 5 (lower is better)
Translates to: ISFHPPSTPQIIRPDLPNLMALG*PPLGDK
Trigger: TTTATCTCCCAATGGTGGCAAACCCAAGGCCATCAA...GTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp CCCTGGGTCAAGGTGCTCCCACCTTCACCTTTTCATACACTCATTCCTTTCATGGAGTTTAAACATCTCTaGGTTGATGGCCTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: PWVKVLPPSPFHTLIPFMEFKHL*VDGLGF
Trigger: AAACCCAAGGCCATCAACCAAGAGATGTTTAAACTC...CATGAAAGGAATGAGTGTATGAAAAGGTGAAGGTGGGAGCACCTTGACCCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp TGTGCTGAGGCTAATTGGACAAGCAGGTGTTCATGCTGTCTCCTCTCCCTTCAAGGGAATGGGAACATGTaGCAGTGTGTAACTCATTTT +
Preference number: 5 (lower is better)
Translates to: CAEANWTSRCSCCLLSLQGNGNM*QCVTHF
Trigger: AAAATGAGTTACACACTGCAACATGTTCCCATTCCC...TTGAAGGGAGAGGAGACAGCATGAACACCTGCTTGTCCAATTAGCCTCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp ATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGGTCTTATGTTCAGGATaGGCATCACAGAGGTACACA +
Preference number: 5 (lower is better)
Translates to: IHSSNYTPRPAQHCLMFRVLCSG*ASQRYT
Trigger: TGTGTACCTCTGTGATGCCAATCCTGAACATAAGAC...CCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGCGTCTTATGTTCAGGATaGGCATCACAGAGGTACACA +
Preference number: 5 (lower is better)
Translates to: SSNYTPRPAQHCLMFRIGVLCSG*ASQRYT
Trigger: TGTGTACCTCTGTGATGCCAATCCTGAACATAAGAC...GCCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACAGGAGAGTCCACTTGTaGATCATAAGGGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: FFSSTIHSSNYTPRPAQHRRVHL*IIRERL
Trigger: AAGCCTTTCCCTTATGATCAACAAGTGGACTCTCCT...GTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS TCA 90 bp TCTCTAGGTAATTTCTGCAACCTTCCAACAAGTATTCCCATCTCCTaGAGGACAGCTGGGATCATGGCAAACTCTGAGACAAAAACCTGC +
Preference number: 5 (lower is better)
Translates to: SLGNFCNLPTSIPIS*RTAGIMANSETKTC
Trigger: GCAGGTTTTTGTCTCAGAGTTTGCCATGATCCCAGCTGTCCTTCAGGAGATGGGAATACTTGTTGGAAGGTTGCAGAAATTACCTAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS-3UTR CAA 90 bp AATGCAGGGAGAGAAGTTGGGAGGTTACTTGAGAGGTGTGAGTGGTATAGACTGACCACAGCCTTCAGATaGAATGGATTTCCATGGTTT +
Preference number: 5 (lower is better)
Translates to: NAGREVGRLLERCEWYRLTTAFR*NGFPWF
Trigger: AAACCATGGAAATCCATTCAATCTGAAGGCTGTGGT...CAGTCTATACCACTCACACCTCTCAAGTAACCTCCCAACTTCTCTCCCTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp ACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCACCACAGCCTTCAGATaGAATGGATTTCCATGGTTT +
Preference number: 5 (lower is better)
Translates to: TIHSSNYTPRPAQHCLMFTTAFR*NGFPWF
Trigger: AAACCATGGAAATCCATTCAATCTGAAGGCTGTGGT...GAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACAAATGCTGTTTCCAGTaGATGAGTTCTGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: FFSSTIHSSNYTPRPAQHKCCFQ*MSSGDP
Trigger: TGGATCACCAGAACTCATCAACTGGAAACAGCATTT...GTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGCAAATGCTGTTTCCAGTaGATGAGTTCTGGTGATCCA +
Preference number: 5 (lower is better)
Translates to: SSNYTPRPAQHCLMFRIGKCCFQ*MSSGDP
Trigger: TGGATCACCAGAACTCATCAACTGGAAACAGCATTT...GCCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTAATGGCTGCAAGATTTaGTATAGCCTCATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: SFHPPSTPQIIRPDLPNTNGCKI*YSLIQA
Trigger: AGCCTGAATGAGGCTATACAAAATCTTGCAGCCATT...AGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACAATGGCTGCAAGATTTaGTATAGCCTCATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: FFSSTIHSSNYTPRPAQHNGCKI*YSLIQA
Trigger: AGCCTGAATGAGGCTATACAAAATCTTGCAGCCATT...GTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp AGCTGTTGGAGGAAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGATGTGTTTGTTTGACTTaGAAGGACTTAATGGCTGCA +
Preference number: 5 (lower is better)
Translates to: SCWRKKAGRAIKVQVVARCVCLT*KDLMAA
Trigger: TGCAGCCATTAAGTCCTTCAAAGTCAAACAAACACA...TCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTTCCTCCAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp TTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTGTGTTTGTTTGACTTaGAAGGACTTAATGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FHPPSTPQIIRPDLPNTVCVCLT*KDLMAA
Trigger: TGCAGCCATTAAGTCCTTCAAAGTCAAACAAACACA...GACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp GAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATTCGAGAATGCGTTGTGTTaGTTTGACTTTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: ESRKGNKGPSGSQRPGLFENALC*FDFEGL
Trigger: AAGTCCTTCAAAGTCAAACAAACACAACGCATTCTC...GAATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp TTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTGAGAATGCGTTGTGTTaGTTTGACTTTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: FIHHPLLKLYAQTCPTLSENALC*FDFEGL
Trigger: AAGTCCTTCAAAGTCAAACAAACACAACGCATTCTC...AGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCGAGAATGCGTTGTGTTaGTTTGACTTTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: FHPPSTPQIIRPDLPNTVENALC*FDFEGL
Trigger: AAGTCCTTCAAAGTCAAACAAACACAACGCATTCTC...GACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACGAGTTTAAACATCTCTaGGTTGATGGCCTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: FFSSTIHSSNYTPRPAQHEFKHL*VDGLGF
Trigger: AAACCCAAGGCCATCAACCAAGAGATGTTTAAACTC...GTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp ATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACAGGAGAGTCCACTTGTaGATCATAAGGGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: ISFHPPSTPQIIRPDLPNRRVHL*IIRERL
Trigger: AAGCCTTTCCCTTATGATCAACAAGTGGACTCTCCT...GTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp ACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGAATGGCTGCAAGATTTaGTATAGCCTCATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: TPQIIRPDLPNTVLCSGLNGCKI*YSLIQA
Trigger: AGCCTGAATGAGGCTATACAAAATCTTGCAGCCATT...CAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATGTGTTTGTTTGACTTaGAAGGACTTAATGGCTGCA +
Preference number: 5 (lower is better)
Translates to: STPQIIRPDLPNTVLCSGCVCLT*KDLMAA
Trigger: TGCAGCCATTAAGTCCTTCAAAGTCAAACAAACACA...TCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp CATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGTGTGTTTGTTTGACTTaGAAGGACTTAATGGCTGCA +
Preference number: 5 (lower is better)
Translates to: HPLLKLYAQTCPTLSYVQCVCLT*KDLMAA
Trigger: TGCAGCCATTAAGTCCTTCAAAGTCAAACAAACACA...CTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp AAGAAAGCAGGAAGGGCAATAAAGGTCCAAGTGGTAGCCAGAGGCCTGGTTTATTTGGGTTTGCCACCATaGGGAGATAAAATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: KKAGRAIKVQVVARGLVYLGLPP*GDKIFD
Trigger: ATCAAAGATTTTATCTCCCAATGGTGGCAAACCCAA...ATAAACCAGGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp TCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGCTTGGGTTTGCCACCATaGGGAGATAAAATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: SSNYTPRPAQHCLMFRIGLGLPP*GDKIFD
Trigger: ATCAAAGATTTTATCTCCCAATGGTGGCAAACCCAA...GCCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp ATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATTTGGGTTTGCCACCATaGGGAGATAAAATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: IHHPLLKLYAQTCPTLSYLGLPP*GDKIFD
Trigger: ATCAAAGATTTTATCTCCCAATGGTGGCAAACCCAA...ATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp CACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGGAATGGGAACATGTaGCAGTGTGTAACTCATTTT +
Preference number: 5 (lower is better)
Translates to: HSSNYTPRPAQHCLMFRIGNGNM*QCVTHF
Trigger: AAAATGAGTTACACACTGCAACATGTTCCCATTCCC...AATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp CCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCCAGGAGAAGTAATTaGGAGCAATATGTATCTGAT +
Preference number: 5 (lower is better)
Translates to: PPSTPQIIRPDLPNTVLCSRRSN*EQYVSD
Trigger: ATCAGATACATATTGCTCCAAATTACTTCTCCTGGA...ACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp TCCTATCTCTCCTCAATAAACCATCACATCCCTGGGTCAAGGTGCTCCCACCTTTCCAGGAGAAGTAATTaGGAGCAATATGTATCTGAT +
Preference number: 5 (lower is better)
Translates to: SYLSSINHHIPGSRCSHLSRRSN*EQYVSD
Trigger: ATCAGATACATATTGCTCCAAATTACTTCTCCTGGA...AAGGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp CACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTATGGAAGTTTTCAGGTaGAAGTTCAGGGATATGGAA +
Preference number: 5 (lower is better)
Translates to: HHPLLKLYAQTCPTLSYVMEVFR*KFRDME
Trigger: TTCCATATCCCTGAACTTCAACCTGAAAACTTCCAT...AACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529732.5
CDS-3UTR CAA 90 bp TTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACCACAGCCTTCAGATaGAATGGATTTCCATGGTTT +
Preference number: 5 (lower is better)
Translates to: LFLFIHHPLLKLYAQTCPTTAFR*NGFPWF
Trigger: AAACCATGGAAATCCATTCAATCTGAAGGCTGTGGT...TGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp CTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATGTTCAGGATTGGATGCGTTGTGTTTGTTaGACTTTGAAGGACTTAATG +
Preference number: 5 (lower is better)
Translates to: LLKLYAQTCPTLSYVQDWMRCVC*TLKDLM
Trigger: CATTAAGTCCTTCAAAGTCAAACAAACACAACGCAT...CCAATCCTGAACATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp ATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAACACTGTCTTATATGCGTTGTGTTTGTTaGACTTTGAAGGACTTAATG +
Preference number: 5 (lower is better)
Translates to: IHHPLLKLYAQTCPTLSYMRCVC*TLKDLM
Trigger: CATTAAGTCCTTCAAAGTCAAACAAACACAACGCAT...ATAAGACAGTGTTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp CAGAGTCCAAACAGTGCCCACTCCTTTACTGCTGATTACAATTTATTATTTCTTTCTTGGTTGATGGCCTaGGGTTTGCCACCATTGGGA +
Preference number: 5 (lower is better)
Translates to: QSPNSAHSFTADYNLLFLSWLMA*GLPPLG
Trigger: TCCCAATGGTGGCAAACCCAAGGCCATCAACCAAGA...AAGAAATAATAAATTGTAATCAGCAGTAAAGGAGTGGGCACTGTTTGGACTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp ATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCGAGTTTAAACATCTCTaGGTTGATGGCCTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: IISFHPPSTPQIIRPDLPEFKHL*VDGLGF
Trigger: AAACCCAAGGCCATCAACCAAGAGATGTTTAAACTC...GGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp ATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCGGGAATGGGAACATGTaGCAGTGTGTAACTCATTTT +
Preference number: 5 (lower is better)
Translates to: IISFHPPSTPQIIRPDLPGNGNM*QCVTHF
Trigger: AAAATGAGTTACACACTGCAACATGTTCCCATTCCC...GGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp TATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGCCCAAGAGAATGCGTTGTGTTaGTTTGACTTTGAAGGACTT +
Preference number: 5 (lower is better)
Translates to: YFFSSTIHSSNYTPRPAQENALC*FDFEGL
Trigger: AAGTCCTTCAAAGTCAAACAAACACAACGCATTCTC...TTGGGCAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp ATTCTGATTTCTTTGTACAACATTGATTGTAGGAAAGCCAGAGTGAATGCAGGGAAAGGAGTCAGTTCCTaGGCTGTTTCAGCTGCCATA +
Preference number: 5 (lower is better)
Translates to: ILISLYNIDCRKARVNAGKGVSS*AVSAAI
Trigger: TATGGCAGCTGAAACAGCCAAGGAACTGACTCCTTT...CCCTGCATTCACTCTGGCTTTCCTACAATCAATGTTGTACAAAGAAATCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp CCTGCTGAGGAGAGTCCACTTGTTGATCATAAGGGAAAGGCTTTAGAAAGAAAGATGCGTTGTGTTTGTTaGACTTTGAAGGACTTAATG +
Preference number: 5 (lower is better)
Translates to: PAEESPLVDHKGKALERKMRCVC*TLKDLM
Trigger: CATTAAGTCCTTCAAAGTCAAACAAACACAACGCAT...CTTTCTTTCTAAAGCCTTTCCCTTATGATCAACAAGTGGACTCTCCTCAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp GAAGAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGCACATGGCCTTGGGTTaGCCACCATTGGGAGATAAA +
Preference number: 5 (lower is better)
Translates to: EEITNVKSWNIDELVMKEHMALG*PPLGDK
Trigger: TTTATCTCCCAATGGTGGCAAACCCAAGGCCATGTG...CTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp GAAGAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGATGCAGGGAGAGAAGTaGGGAGGTTACTTGAGAGGT +
Preference number: 5 (lower is better)
Translates to: EEITNVKSWNIDELVMKEMQGEK*GGYLRG
Trigger: ACCTCTCAAGTAACCTCCCAACTTCTCTCCCTGCAT...CTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp TTACAGCAGGAACAAACTGAGATTAGTAATGTGCTGAGGCTAATTGGACAAGCATTGGGTTTGCCACCATaGGGAGATAAAATCTTTGAT +
Preference number: 5 (lower is better)
Translates to: LQQEQTEISNVLRLIGQALGLPP*GDKIFD
Trigger: ATCAAAGATTTTATCTCCCAATGGTGGCAAACCCAA...TGCTTGTCCAATTAGCCTCAGCACATTACTAATCTCAGTTTGTTCCTGCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp ATTCTGATTTCTTTGTACAACATTGATTGTAGGAAAGCCAGAGTGAATGCAGGGTTAAACATCTCTTGGTaGCTATGGAGGGTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: ILISLYNIDCRKARVNAGLNISW*LWRVQE
Trigger: TTCTTGGACCCTCCATAGCAACCAAGAGATGTTTAA...CCCTGCATTCACTCTGGCTTTCCTACAATCAATGTTGTACAAAGAAATCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp ATTTATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGTCTTATGTTCAGGATaGGCATCACAGAGGTACACA +
Preference number: 5 (lower is better)
Translates to: IYYFFSSTIHSSNYTPRPVLCSG*ASQRYT
Trigger: TGTGTACCTCTGTGATGCCAATCCTGAACATAAGAC...AGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS-3UTR CAA 90 bp GAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGGAAGTGACCTCTATTGTCTaGAGAGACAGAGTAGACAGA +
Preference number: 5 (lower is better)
Translates to: EITNVKSWNIDELVMKEEVTSIV*RDRVDR
Trigger: TCTGTCTACTCTGTCTCTCAAGACAATAGAGGTCAC...TTCCTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp GTCTCAGGTATTTTGTTACAGCAGGAACAAACTGAGATTAGTAATGTGCTGAGGATGTGGGGAGGTAAATaGCTTATGTCAAATGTAAGA +
Preference number: 5 (lower is better)
Translates to: VSGILLQQEQTEISNVLRMWGGK*LMSNVR
Trigger: TCTTACATTTGACATAAGCAATTTACCTCCCCACAT...CCTCAGCACATTACTAATCTCAGTTTGTTCCTGCTGTAACAAAATACCTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp GAAGAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGGAATTCCTGACAGTTTaGGGGATCTTTGGAGTAGAT +
Preference number: 5 (lower is better)
Translates to: EEITNVKSWNIDELVMKEEFLTV*GIFGVD
Trigger: ATCTACTCCAAAGATCCCCAAAACTGTCAGGAATTC...CTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp TTTATTATTTCTTTTCATCCACCATCCACTCCTCAAATTATACGCCCAGACCTGATGTGGGGAGGTAAATaGCTTATGTCAAATGTAAGA +
Preference number: 5 (lower is better)
Translates to: FIISFHPPSTPQIIRPDLMWGGK*LMSNVR
Trigger: TCTTACATTTGACATAAGCAATTTACCTCCCCACAT...CAGGTCTGGGCGTATAATTTGAGGAGTGGATGGTGGATGAAAAGAAATAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344743.8
ENST00000611865.4
CDS-3UTR CAA 90 bp TTTGTATTTGCTGTGACCTCTATTGTCTTGAGAGACAGAGTAGACAGAAGAAATTTTCTTTGTACAACATaGATTGTAGGAAAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: FVFAVTSIVLRDRVDRRNFLCTT*IVGKPE
Trigger: CTCTGGCTTTCCTACAATCAATGTTGTACAAAGAAA...ATTTCTTCTGTCTACTCTGTCTCTCAAGACAATAGAGGTCACAGCAAATACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS-3UTR CAA 90 bp GAAATAACAAATGTGAAGTCCTGGAATATAGATGAGCTTGTGATGAAAGAGGAAATGCGTTGTGTTTGTTaGACTTTGAAGGACTTAATG +
Preference number: 5 (lower is better)
Translates to: EITNVKSWNIDELVMKEEMRCVC*TLKDLM
Trigger: CATTAAGTCCTTCAAAGTCAAACAAACACAACGCAT...TTCCTCTTTCATCACAAGCTCATCTATATTCCAGGACTTCACATTTGTTATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS GCA 72 bp ACGTCACAAGGCCATGGAGCCGGTATTCCGGCAAGGTaGCTGCCATTCTCATCTCTCCAGTCTGGTCCATTA +
Preference number: 6 (lower is better)
Translates to: TSQGHGAGIPAR*LPFSSLQSGPL
Trigger: TAATGGACCAGACTGGAGAGATGAGAATGGCAGGCACCTTGCCGGAATACCGGCTCCATGGCCTTGTGACGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS GCA 72 bp GCTGGGAGGCTCTTCCTCAAGGATTTCTCCAGCATCTaGAGCATCTGGGCACCTTGCAATGGTAACATCATG +
Preference number: 6 (lower is better)
Translates to: AGRLFLKDFSSI*SIWAPCNGNIM
Trigger: CATGATGTTACCATTGCAAGGTGCCCAGATGCTGCAGATGCTGGAGAAATCCTTGAGGAAGAGCCTCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278400.3
ENST00000344743.8
ENST00000529732.5
ENST00000531084.1
CDS CCA 72 bp CTCTTCCTCAAGGATTTCTCCAGCATCTGCAGCATCTaGGCACCTTGCAATGGTAACATCATGGAGGATACC +
Preference number: 6 (lower is better)
Translates to: LFLKDFSSICSI*APCNGNIMEDT
Trigger: GGTATCCTCCATGATGTTACCATTGCAAGGTGCCCAGATGCTGCAGATGCTGGAGAAATCCTTGAGGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000278400.3
ENST00000344743.8
ENST00000529732.5
ENST00000531084.1
CDS CCA 72 bp GTTCAGGATTGGCATCACAGAGGTACACAGTTCCACTaGTTCCAGCTTCTGGGAATGGGAACATGTTGCAGT +
Preference number: 6 (lower is better)
Translates to: VQDWHHRGTQFH*FQLLGMGTCCS
Trigger: ACTGCAACATGTTCCCATTCCCAGAAGCTGGAACCAGTGGAACTGTGTACCTCTGTGATGCCAATCCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS TCA 72 bp CATCTCCTGAAGGACAGCTGGGATCATGGCAAACTCTaGGACAAAAACCTGCAGTGGCTCGTTGTTTATAGC +
Preference number: 6 (lower is better)
Translates to: HLLKDSWDHGKL*DKNLQWLVVYS
Trigger: GCTATAAACAACGAGCCACTGCAGGTTTTTGTCTCAGAGTTTGCCATGATCCCAGCTGTCCTTCAGGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS TCA 72 bp AAGCTAGTCTCTGCAGATGTTTCCGGGAAGAAACGATaGGCAACACCCTTCTGGGAGATGAAATTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: KLVSADVSGKKR*ATPFWEMKFLP
Trigger: AGGGAGAAATTTCATCTCCCAGAAGGGTGTTGCTCATCGTTTCTTCCCGGAAACATCTGCAGAGACTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000278400.3
ENST00000344743.8
ENST00000531084.1
CDS GCA 72 bp AAGGATTTCTCCAGCATCTGCAGCATCTGGGCACCTTaGAATGGTAACATCATGGAGGATACCTTAGCTGAT +
Preference number: 6 (lower is better)
Translates to: KDFSSICSIWAP*NGNIMEDTLAD
Trigger: ATCAGCTAAGGTATCCTCCATGATGTTACCATTGCAAGGTGCCCAGATGCTGCAGATGCTGGAGAAATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529732.5
CDS TCA 72 bp AATTTCTGCAACCTTCCAACAAGTATTCCCATCTCCTaGAGGACAGCTGGGATCATGGCAAACTCTGAGACA +
Preference number: 6 (lower is better)
Translates to: NFCNLPTSIPIS*RTAGIMANSET
Trigger: TGTCTCAGAGTTTGCCATGATCCCAGCTGTCCTTCAGGAGATGGGAATACTTGTTGGAAGGTTGCAGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586098.1
CDS CCA 72 bp ATCACAGAGGTACACAGTTCCACTGGTTCCAGCTTCTaGGAATGGGAACATGTTGCAGTGTGTAACTCATTT +
Preference number: 6 (lower is better)
Translates to: ITEVHSSTGSSF*EWEHVAVCNSF
Trigger: AAATGAGTTACACACTGCAACATGTTCCCATTCCCAGAAGCTGGAACCAGTGGAACTGTGTACCTCTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS CAA 90 bp AGGAGTCAGTTCCTTGGCTGTTTCAGCTGCCATATAGAGAATGCGTaGTGTTTGTTTGACTTTGAAGGACTTAATGGCTGCAAGATTTTG +
Preference number: 6 (lower is better)
Translates to: RSQFLGCFSCHIENA*CLFDFEGLNGCKIL
Trigger: CAAAATCTTGCAGCCATTAAGTCCTTCAAAGTCAAACAAACACAACGCATTCTCTATATGGCAGCTGAAACAGCCAAGGAACTGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000278400.3
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS CCA 72 bp TGTGAGTGGTATAGACTGGATTTTATCAAACTCACATaGCCTTGGGTTTGCCACCATTGGGAGATAAAATCT +
Preference number: 6 (lower is better)
Translates to: CEWYRLDFIKLT*PWVCHHWEIKS
Trigger: AGATTTTATCTCCCAATGGTGGCAAACCCAAGGCCATGTGAGTTTGATAAAATCCAGTCTATACCACTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS CAA 90 bp CCAGCTTCTGGGAATGGGAACATGTTGCAGTGTGTAACTCATTTTTaGCATAGCTTCATTGCTGTAGTCTACATGAGAATAGACAGGAAA +
Preference number: 6 (lower is better)
Translates to: PASGNGNMLQCVTHF*HSFIAVVYMRIDRK
Trigger: TTTCCTGTCTATTCTCATGTAGACTACAGCAATGAAGCTATGCAAAAAATGAGTTACACACTGCAACATGTTCCCATTCCCAGAAGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4
CDS CCA 72 bp TGGTATAGACTGGATTTTATCAAACTCACATGGCCTTaGGTTTGCCACCATTGGGAGATAAAATCTTTGATT +
Preference number: 6 (lower is better)
Translates to: WYRLDFIKLTWP*VCHHWEIKSLI
Trigger: AATCAAAGATTTTATCTCCCAATGGTGGCAAACCCAAGGCCATGTGAGTTTGATAAAATCCAGTCTATACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000278400.3
CDS CAA 72 bp GGGAATGGGAACATGTTGCAGTGTGTAACTCATTTTTaGCATAGCTTCATTGCTGTAGTCTACATGAGAATA +
Preference number: 6 (lower is better)
Translates to: GNGNMLQCVTHF*HSFIAVVYMRI
Trigger: TATTCTCATGTAGACTACAGCAATGAAGCTATGCAAAAAATGAGTTACACACTGCAACATGTTCCCATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344743.8
ENST00000529732.5
ENST00000611865.4