Pregenerated sensors for GLTPD2 (Homo sapiens)
Ensembl gene IDs: ENSG00000182327Ensembl transcript IDs: ENST00000331264.8
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGTCTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTaGCGGGGGCGGCCCTCGCCGCGGCGACGTCACGGAAGAGGCGGG | + |
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Preference number: 1 (lower is better) Translates to: PSFRDCGQRELNAIP*RGRPSPRRRHGRGG Trigger: CCCGCCTCTTCCGTGACGTCGCCGCGGCGAGGGCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAGACGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| 3UTR GCA 72 bp | CGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTaGCGGGGGCGGCCCTCGCCGCGGCGACGTCACGGA | + |
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Preference number: 3 (lower is better) Translates to: RDCGQRELNAIP*RGRPSPRRRHG Trigger: TCCGTGACGTCGCCGCGGCGAGGGCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| 3UTR GCA 72 bp | TTTTATTCCTCACAGCTCCTCCCGTCTTTCCGAGACTaGGGACAGAGGGAGCTCAACGCCATTCCCTGCCGG | + |
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Preference number: 3 (lower is better) Translates to: FYSSQLLPSFRD*GQRELNAIPCR Trigger: CCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAGACGGGAGGAGCTGTGAGGAATAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | GGGCGGCCCTCGCCGCGGCGACGTCACGGAAGAGGCGGGATACGGAGGCGGCCGCGCCACTCCCATGCCTaGTGCTGGGACCGCCGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GRPSPRRRHGRGGIRRRPRHSHA*CWDRRP Trigger: GGGGCGGCGGTCCCAGCAGCAGGCATGGGAGTGGCG...CGGCCGCCTCCGTATCCCGCCTCTTCCGTGACGTCGCCGCGGCGAGGGCCGCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | CCTCGCCGCGGCGACGTCACGGAAGAGGCGGGATACGGAGGCGGCCGCGGCGCGGCGCCGCCACTCCCATaGCTGCTGCTGGGACCGCCG | + |
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Preference number: 4 (lower is better) Translates to: PRRGDVTEEAGYGGGRGAAPPLP*LLLGPP Trigger: CGGCGGTCCCAGCAGCAGGCATGGGAGTGGCGGCGC...CGCGCCGCGGCCGCCTCCGTATCCCGCCTCTTCCGTGACGTCGCCGCGGCGAGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | GGGGCGGCCCTCGCCGCGGCGACGTCACGGAAGAGGCGGGATACGGAGGCGGCCGCAGCAGGAGCAGCGTaGGAGAGCCCGAGCTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GAALAAATSRKRRDTEAAAAGAA*ESPSSG Trigger: CCCGGAGCTCGGGCTCTCGCACGCTGCTCCTGCTGC...GGCCGCCTCCGTATCCCGCCTCTTCCGTGACGTCGCCGCGGCGAGGGCCGCCCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTGCCGGGGGCGGCCCTCGCCGCGGCGACGTCACGGAAGAGGCGGGATACGGGCGCCGTTTCCCCTaGAACGCAGGGCTGCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: FPAGGGPRRGDVTEEAGYGRRFP*NAGLRP Trigger: AGGGCGCAGCCCTGCGTTCCAGGGGAAACGGCGCCC...GTATCCCGCCTCTTCCGTGACGTCGCCGCGGCGAGGGCCGCCCCCGGCAGGGAA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CCA 90 bp | GAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCCCTCGCTCCCATGCCTGCTGCTaGGACCGCCGCCCCCTCACC | + |
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Preference number: 4 (lower is better) Translates to: ETADRGSSTPFPAGGGPRSHACC*DRRPLT Trigger: GGTGAGGGGGCGGCGGTCCCAGCAGCAGGCATGGGA...GCGAGGGCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CCA 90 bp | CTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCCGGTGGAGGCAGAGCTaGGACCAGCGCAGCGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: LSETADRGSSTPFPAGGGRWRQS*DQRSAR Trigger: CCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACCG...GCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | CTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCCACTCCCATGCCTGCTaGTGGGACCGCCGCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LSETADRGSSTPFPAGGGHSHAC*WDRRPL Trigger: GAGGGGGCGGCGGTCCCAGCAGCAGGCATGGGAGTG...GCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | CTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCGAGTGGCTGAACCAGTaGCGCAGGGCTGGGGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LSETADRGSSTPFPAGGGEWLNQ*RRAGGR Trigger: GCGGCCCCCAGCCCTGCGGCACTGGTTCAGCCACTC...GCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | CCGTCTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCTCAACGCCATTCCCTaGCGGGGGCGGCCCTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: PSFRDCGQRELNAIPCRGLNAIP*RGRPSP Trigger: CGGCGAGGGCCGCCCCCGGCAGGGAATGGCGTTGAG...CCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAGACGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CCA 90 bp | CCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCCCTCGACTCCTGCCGGACCTaGAAGGGCGCCGTTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PRLRTEGAQRHSLPGAALDSCRT*KGAVSP Trigger: AGGGGAAACGGCGCCCTTCCAGGTCCGGCAGGAGTC...GAGGGCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | TCTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCACGGTAGGCGTCGCTaGACTGCACGCCCGCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: SFRDCGQRELNAIPCRGRHGRRR*TARPRP Trigger: CGGACGCGGGCGTGCAGTGCAGCGACGCCTACCGTG...CCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | TCTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGAGACATCCTCCAAGGTaGCGGCGGCCCGGACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: SFRDCGQRELNAIPCRGRRHPPR*RRPGPA Trigger: CGCTGGTCCGGGCCGCCGGCACCTTGGAGGATGTCT...CCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CCA 90 bp | GAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCCCTCGCGCGAGAGGAATTGAGTaGCTGAACCAGTGCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ETADRGSSTPFPAGGGPRARGIE*LNQCRR Trigger: CCTGCGGCACTGGTTCAGCCACTCAATTCCTCTCGC...GCGAGGGCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR TCA 90 bp | CTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCGATAGCGAGAGGAATTaGGTGGCTGAACCAGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: LSETADRGSSTPFPAGGGDSERN*VAEPVP Trigger: CGGCACTGGTTCAGCCACTCAATTCCTCTCGCTATC...GCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | TCTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCCGTCTTTCCGAGACTaGGGACAGAGGGAGCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: SFRDCGQRELNAIPCRGRPSFRD*GQRELN Trigger: GTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAGACGG...CCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR TCA 90 bp | GCGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCCAAATATTGCTTCGGACCAGCCAGGGGTaGTGCGGACCCAGGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: APVVITQNALRRRCQILLRTSQG*CGPRAA Trigger: TGCGGCCCTGGGTCCGCATCACCCCTGGCTGGTCCG...AAGCAATATTTGGCAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | AGCGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCCAAATATTGCTCCTGGAACGCAGGGCTaGGCCCTGGGTCCGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SACRHHTKRPTSTLPNIAPGTQG*ALGPQP Trigger: GGGCTGCGGACCCAGGGCGCAGCCCTGCGTTCCAGG...AGCAATATTTGGCAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | TATTCCTCACAGCTCCTCCCGTCTTTCCGAGACTGCGGACAGAGGGAGCTCAACGGAACCGCCTCATCATaGGGCCCAGCATCCCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: YSSQLLPSFRDCGQRELNGTASS*GPASPE Trigger: CTCGGGGGATGCTGGGCCGCATGATGAGGCGGTTCC...GTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAGACGGGAGGAGCTGTGAGGAATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | GCGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCCAAATATTGCTTTCCGCGTCCGGGCCGTaGACCCGAGCCTCCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: APVVITQNALRRRCQILLSASGP*TRASRS Trigger: AGACCTGGAGGCTCGGGTGCACGGCCCGGACGCGGA...AAGCAATATTTGGCAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CCA 90 bp | CTCACAGCTCCTCCCGTCTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATGGTTTCAGACTGGCGTaGAACCGCCTCATCATGCGG | + |
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Preference number: 4 (lower is better) Translates to: LTAPPVFPRLRTEGAQRHGFRLA*NRLIMR Trigger: CCGCATGATGAGGCGGTTCCACGCCAGTCTGAAACC...ATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAGACGGGAGGAGCTGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CCA 90 bp | AGCGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCCAAATATTGCTGCTCCCACGCCGCCATaGCCACCAGCGACCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SACRHHTKRPTSTLPNIAAPTPP*PPATSS Trigger: ACTACTGGTCGCTGGTGGCCATGGCGGCGTGGGAGC...AGCAATATTTGGCAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CCA 90 bp | TTAAGCGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCCAAATATTCCGGTCGCCACCCGGTaGAGGCAGAGCTGGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: LSACRHHTKRPTSTLPNIPVATR*RQSWDQ Trigger: CTGGTCCCAGCTCTGCCTCCACCGGGTGGCGACCGG...AATATTTGGCAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCGCTTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR TCA 90 bp | GCGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCCAAATATTGCTTGAGGAATTGAGTGGCTaGACCAGTGCCGCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: APVVITQNALRRRCQILLEELSG*TSAAGL Trigger: CAGCCCTGCGGCACTGGTTCAGCCACTCAATTCCTC...AAGCAATATTTGGCAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | CGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCCAAATATTGCTTTCAGGAACTCGACGAGTaGCCTCCATCCCGCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: RLSSSHKTPYVDAAKYCFQELDE*PPSRQV Trigger: TACCTGGCGGGATGGAGGGCACTCGTCGAGTTCCTG...AAAGCAATATTTGGCAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR TCA 90 bp | TTATTTCCCTTAAGCGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCTAGGCTCCGAACACTaGGATAAAGCAGCAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LFPLSACRHHTKRPTSTLLGSEH*DKAAAA Trigger: CGCTGCTGCTGCTTTATCTCAGTGTTCGGAGCCTAG...CAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCGCTTAAGGGAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR GCA 90 bp | TTAAGCGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCCAAATATTCCAGCAGGCTCTGGGTaGGGTTGTAGACATCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LSACRHHTKRPTSTLPNIPAGSG*GCRHPP Trigger: TGGAGGATGTCTACAACCGCACCCAGAGCCTGCTGG...AATATTTGGCAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCGCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CCA 90 bp | CGCCTGTCGTCATCACACAAAACGCCCTACGTCGACGCTGCCAAATATTGCTTTCTTCGGGTTTCAGACTaGCGTGGAACCGCCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: RLSSSHKTPYVDAAKYCFLRVSD*RGTASS Trigger: TGATGAGGCGGTTCCACGCCAGTCTGAAACCCGAAG...AAAGCAATATTTGGCAGCGTCGACGTAGGGCGTTTTGTGTGATGACGACAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CCA 90 bp | CCCCCGGCTGCTCCAGCAGTCCCGCCCTCCGCTCCCACGCCGCCATaGCCACCAGCGACCAGTAGTGCTCCGCGTCCGGGCCGTGCACCC | + |
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Preference number: 5 (lower is better) Translates to: PPAAPAVPPSAPTPP*PPATSSAPRPGRAP Trigger: GGGTGCACGGCCCGGACGCGGAGCACTACTGGTCGCTGGTGGCCATGGCGGCGTGGGAGCGGAGGGCGGGACTGCTGGAGCAGCCGGGGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CCA 90 bp | TCCGGGCCTCCCAGCGCGCCGGTCGCCACCCGGTGGAGGCAGAGCTaGGACCAGCGCAGCGCGCGGTGCAGCAGGAGCAGCGTGCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: SGPPSAPVATRWRQS*DQRSARCSRSSVRE Trigger: CTCTCGCACGCTGCTCCTGCTGCACCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACCGGGTGGCGACCGGCGCGCTGGGAGGCCCGGA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS GCA 90 bp | GTCGCCACCCGGTGGAGGCAGAGCTGGGACCAGCGCAGCGCGCGGTaGAGCAGGAGCAGCGTGCGAGAGCCCGAGCTCCGGGTCGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: VATRWRQSWDQRSAR*SRSSVREPELRVGS Trigger: GGACCCGACCCGGAGCTCGGGCTCTCGCACGCTGCTCCTGCTGCACCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACCGGGTGGCGAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS GCA 90 bp | TCCTGCCGGACCTGGAAGGGCGCCGTTTCCCCTGGAACGCAGGGCTaGGCCCTGGGTCCGCAGCCCGAGCGGGCGCCTAGGCTCCGAACA | + |
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Preference number: 5 (lower is better) Translates to: SCRTWKGAVSPGTQG*ALGPQPERAPRLRT Trigger: TGTTCGGAGCCTAGGCGCCCGCTCGGGCTGCGGACCCAGGGCGCAGCCCTGCGTTCCAGGGGAAACGGCGCCCTTCCAGGTCCGGCAGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS GCA 90 bp | AGCAGCAGCGCGAAGATAGCGAGAGGAATTGAGTGGCTGAACCAGTaGCGCAGGGCTGGGGGCCGCGCCGCCACTCCCATGCCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SSSAKIARGIEWLNQ*RRAGGRAATPMPAA Trigger: AGCAGCAGGCATGGGAGTGGCGGCGCGGCCCCCAGCCCTGCGGCACTGGTTCAGCCACTCAATTCCTCTCGCTATCTTCGCGCTGCTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS GCA 90 bp | CCACATCCCCTTCGGGTTTCAGACTGGCGTGGAACCGCCTCATCATaGGGCCCAGCATCCCCCGAGGGCCCAGACACGGAGGCTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: PHPLRVSDWRGTASS*GPASPEGPDTEAVS Trigger: GGAAACAGCCTCCGTGTCTGGGCCCTCGGGGGATGCTGGGCCGCATGATGAGGCGGTTCCACGCCAGTCTGAAACCCGAAGGGGATGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS-3UTR CAA 90 bp | CTTTCCGAGACTGCGGACAGAGGGAGCTCAACGCCATTCCCTGCCGGGGGCGGCTCCAGGTCTGTCACCTaGGTGAAGGCCTCCCTAGTG | + |
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Preference number: 5 (lower is better) Translates to: LSETADRGSSTPFPAGGGSRSVT*VKASLV Trigger: CACTAGGGAGGCCTTCACCAAGGTGACAGACCTGGA...GCCGCCCCCGGCAGGGAATGGCGTTGAGCTCCCTCTGTCCGCAGTCTCGGAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS TCA 90 bp | AACACTGAGATAAAGCAGCAGCAGCGCGAAGATAGCGAGAGGAATTaGGTGGCTGAACCAGTGCCGCAGGGCTGGGGGCCGCGCCGCCAC | + |
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Preference number: 5 (lower is better) Translates to: NTEIKQQQREDSERN*VAEPVPQGWGPRRH Trigger: GTGGCGGCGCGGCCCCCAGCCCTGCGGCACTGGTTCAGCCACTCAATTCCTCTCGCTATCTTCGCGCTGCTGCTGCTTTATCTCAGTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CCA 72 bp | CCCAGCGCGCCGGTCGCCACCCGGTGGAGGCAGAGCTaGGACCAGCGCAGCGCGCGGTGCAGCAGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PSAPVATRWRQS*DQRSARCSRSS Trigger: GCTGCTCCTGCTGCACCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACCGGGTGGCGACCGGCGCGCTGGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS GCA 72 bp | ACCTGGAAGGGCGCCGTTTCCCCTGGAACGCAGGGCTaGGCCCTGGGTCCGCAGCCCGAGCGGGCGCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: TWKGAVSPGTQG*ALGPQPERAPR Trigger: CCTAGGCGCCCGCTCGGGCTGCGGACCCAGGGCGCAGCCCTGCGTTCCAGGGGAAACGGCGCCCTTCCAGGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CCA 72 bp | AGGGCGCCGTTTCCCCTGGAACGCAGGGCTGCGCCCTaGGTCCGCAGCCCGAGCGGGCGCCTAGGCTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: RAPFPLERRAAP*VRSPSGRLGSE Trigger: TTCGGAGCCTAGGCGCCCGCTCGGGCTGCGGACCCAGGGCGCAGCCCTGCGTTCCAGGGGAAACGGCGCCCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CCA 72 bp | GCTCCAGCAGTCCCGCCCTCCGCTCCCACGCCGCCATaGCCACCAGCGACCAGTAGTGCTCCGCGTCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: APAVPPSAPTPP*PPATSSAPRPG Trigger: GCCCGGACGCGGAGCACTACTGGTCGCTGGTGGCCATGGCGGCGTGGGAGCGGAGGGCGGGACTGCTGGAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CCA 72 bp | CGACTCCTGCCGGACCTGGAAGGGCGCCGTTTCCCCTaGAACGCAGGGCTGCGCCCTGGGTCCGCAGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: RLLPDLEGRRFP*NAGLRPGSAAR Trigger: TCGGGCTGCGGACCCAGGGCGCAGCCCTGCGTTCCAGGGGAAACGGCGCCCTTCCAGGTCCGGCAGGAGTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CAA 90 bp | TGCTCCGCGTCCGGGCCGTGCACCCGAGCCTCCAGGTCTGTCACCTaGGTGAAGGCCTCCCTAGTGGCGAAGGCGAAGACGGAGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: CSASGPCTRASRSVT*VKASLVAKAKTEPR Trigger: CCTCGGCTCCGTCTTCGCCTTCGCCACTAGGGAGGCCTTCACCAAGGTGACAGACCTGGAGGCTCGGGTGCACGGCCCGGACGCGGAGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS GCA 72 bp | CTTCGGGTTTCAGACTGGCGTGGAACCGCCTCATCATaGGGCCCAGCATCCCCCGAGGGCCCAGACACGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRVSDWRGTASS*GPASPEGPDTE Trigger: CTCCGTGTCTGGGCCCTCGGGGGATGCTGGGCCGCATGATGAGGCGGTTCCACGCCAGTCTGAAACCCGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CCA 72 bp | AGCAGCAGCAGCGCGAAGATAGCGAGAGGAATTGAGTaGCTGAACCAGTGCCGCAGGGCTGGGGGCCGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSAKIARGIE*LNQCRRAGGRA Trigger: GGCGCGGCCCCCAGCCCTGCGGCACTGGTTCAGCCACTCAATTCCTCTCGCTATCTTCGCGCTGCTGCTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CAA 72 bp | TCCGGGCCGTGCACCCGAGCCTCCAGGTCTGTCACCTaGGTGAAGGCCTCCCTAGTGGCGAAGGCGAAGACG | + |
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Preference number: 6 (lower is better) Translates to: SGPCTRASRSVT*VKASLVAKAKT Trigger: CGTCTTCGCCTTCGCCACTAGGGAGGCCTTCACCAAGGTGACAGACCTGGAGGCTCGGGTGCACGGCCCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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| CDS CCA 72 bp | ACGGCGACAGCCCCACATCCCCTTCGGGTTTCAGACTaGCGTGGAACCGCCTCATCATGCGGCCCAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: TATAPHPLRVSD*RGTASSCGPAS Trigger: GGATGCTGGGCCGCATGATGAGGCGGTTCCACGCCAGTCTGAAACCCGAAGGGGATGTGGGGCTGTCGCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331264.8 |
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