Pregenerated sensors for GLTP (Homo sapiens)
Ensembl gene IDs: ENSG00000139433Ensembl transcript IDs: ENST00000318348.9, ENST00000537066.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAGGTCACACAGTTGGTACAGAGTTCATGTTCTCCAGCCACTACTaGCACTGCCTCAGACACCAAGTATCTGAAGTTTTGCTTTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QGHTVGTEFMFSSHY*HCLRHQVSEVLLWW Trigger: CCACCAAAGCAAAACTTCAGATACTTGGTGTCTGAGGCAGTGTCAGTAGTGGCTGGAGAACATGAACTCTGTACCAACTGTGTGACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| 3UTR GCA 90 bp | CCAGCCACTACTGACACTGCCTCAGACACCAAGTATCTGAAGTTTTaGTTTGGTGGACAAGTGGAAATAGGTTCCGAGGATTCCAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PATTDTASDTKYLKF*FGGQVEIGSEDSKK Trigger: CTTCTTGGAATCCTCGGAACCTATTTCCACTTGTCCACCAAAGCAAAACTTCAGATACTTGGTGTCTGAGGCAGTGTCAGTAGTGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTCCTGCCTCAGCCTCCTaGGTAGCTGGAACTACAGGC | + |
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Preference number: 2 (lower is better) Translates to: RLECSGAISATVTSTSQFPASAS*VAGTTG Trigger: GCCTGTAGTTCCAGCTACTCAGGAGGCTGAGGCAGG...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTAGGCGTGAGCCACGGTaGCCAGCCATCATGTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: RLECSGAISATVTSTSQFRREPR*PAIMCL Trigger: TAAGCACATGATGGCTGGGCACCGTGGCTCACGCCT...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTAGCCTCCTGAGTAGCTaGAACTACAGGCGTGCGCCA | + |
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Preference number: 2 (lower is better) Translates to: RLECSGAISATVTSTSQFSLLSS*NYRRAP Trigger: TGGCGCACGCCTGTAGTTCCAGCTACTCAGGAGGCT...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTAGCCTCCCAAGAAGATaGGATTACAGGCGTGCGCTA | + |
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Preference number: 2 (lower is better) Translates to: RLECSGAISATVTSTSQFSLPRR*DYRRAL Trigger: TAGCGCACGCCTGTAATCCCATCTTCTTGGGAGGCT...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTAGGCGTGCGCTACCATaGCTGGCTAATTCTATATTT | + |
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Preference number: 2 (lower is better) Translates to: RLECSGAISATVTSTSQFRRALP*LANSIF Trigger: AAATATAGAATTAGCCAGGCATGGTAGCGCACGCCT...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| 3UTR-3UTR CCA 90 bp | CGGACTTGCCCAAGGTCACACAGTTGGTACAGAGTTCATGTTCTCCAGCCACTAGAAGTTTTGCTTTGGTaGACAAGTGGAAATAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: RTCPRSHSWYRVHVLQPLEVLLW*TSGNRF Trigger: GAACCTATTTCCACTTGTCCACCAAAGCAAAACTTC...TAGTGGCTGGAGAACATGAACTCTGTACCAACTGTGTGACCTTGGGCAAGTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| 3UTR-3UTR CAA 90 bp | ACGGACTTGCCCAAGGTCACACAGTTGGTACAGAGTTCATGTTCTCCAGCCACTCAAGTATCTGAAGTTTaGCTTTGGTGGACAAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: TDLPKVTQLVQSSCSPATQVSEV*LWWTSG Trigger: TCCACTTGTCCACCAAAGCAAAACTTCAGATACTTG...AGTGGCTGGAGAACATGAACTCTGTACCAACTGTGTGACCTTGGGCAAGTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| 3UTR GCA 72 bp | ACTGACACTGCCTCAGACACCAAGTATCTGAAGTTTTaGTTTGGTGGACAAGTGGAAATAGGTTCCGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: TDTASDTKYLKF*FGGQVEIGSED Trigger: ATCCTCGGAACCTATTTCCACTTGTCCACCAAAGCAAAACTTCAGATACTTGGTGTCTGAGGCAGTGTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| 3UTR CCA 72 bp | TGCCTCAGACACCAAGTATCTGAAGTTTTGCTTTGGTaGACAAGTGGAAATAGGTTCCGAGGATTCCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: CLRHQVSEVLLW*TSGNRFRGFQE Trigger: TTCTTGGAATCCTCGGAACCTATTTCCACTTGTCCACCAAAGCAAAACTTCAGATACTTGGTGTCTGAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTCAGGCTGGAATGCAGTaGCGCGATCTCGGCTACTGT | + |
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Preference number: 4 (lower is better) Translates to: RLECSGAISATVTSTSQFQAGMQ*RDLGYC Trigger: ACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCTG...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR TCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTAGCCATGGTACTTCTTaGGGGCCATCTCGTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RLECSGAISATVTSTSQFSHGTS*GPSRRP Trigger: AGGCCTACGAGATGGCCCTCAAGAAGTACCATGGCT...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR GCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTGGGTGCTGCGTACAGTaGTGCCTGGAAGATCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RLECSGAISATVTSTSQFGCCVQ*CLEDLL Trigger: CAGAAGATCTTCCAGGCAGCACTGTACGCAGCACCC...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR TCA 90 bp | AGGATTCCAAGAAGTCCAGGAACGAAGGCCTCTGAGATGGAGCCAGGTAGGCCTAGCCATGGTACTTCTTaGGGGCCATCTCGTAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RIPRSPGTKASEMEPGRPSHGTS*GPSRRP Trigger: AGGCCTACGAGATGGCCCTCAAGAAGTACCATGGCT...AGGCCTACCTGGCTCCATCTCAGAGGCCTTCGTTCCTGGACTTCTTGGAATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR GCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTTGCTGCGTACAGTGCTaGCTGGAAGATCTTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RLECSGAISATVTSTSQFCCVQC*LEDLLH Trigger: GTGCAGAAGATCTTCCAGGCAGCACTGTACGCAGCA...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTGCGTACAGTGCTGCCTaGAAGATCTTCTGCACGATC | + |
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Preference number: 4 (lower is better) Translates to: RLECSGAISATVTSTSQFAYSAA*KIFCTI Trigger: GATCGTGCAGAAGATCTTCCAGGCAGCACTGTACGC...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR GCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTGAGTTTCGCTTTTGTTaGCCAGGCTGGAATGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RLECSGAISATVTSTSQFEFRFC*PGWNAV Trigger: CACTGCATTCCAGCCTGGGCAACAAAAGCGAAACTC...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTGAAAGAAACGCCTCTTaGTCATCAAGGGCTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RLECSGAISATVTSTSQFERNAS*SSRACW Trigger: CCAGCAAGCCCTTGATGACCAAGAGGCGTTTCTTTC...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR GCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTTGGTCATCAAGGGCTTaGTGGTTGGTTTCAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: RLECSGAISATVTSTSQFWSSRA*WLVSAV Trigger: TACAGCTGAAACCAACCAGCAAGCCCTTGATGACCA...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR GCA 90 bp | CGGACTTGCCCAAGGTCACACAGTTGGTACAGAGTTCATGTTCTCCAGCCACTAAGAGGAGCACGGACTTaGCCAAGGTCACACAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: RTCPRSHSWYRVHVLQPLRGART*PRSHSW Trigger: CCAACTGTGTGACCTTGGGCAAGTCCGTGCTCCTCT...TAGTGGCTGGAGAACATGAACTCTGTACCAACTGTGTGACCTTGGGCAAGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR TCA 90 bp | ACGGACTTGCCCAAGGTCACACAGTTGGTACAGAGTTCATGTTCTCCAGCCACTTTCTCCAGCCACTACTaGCACTGCCTCAGACACCAA | + |
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Preference number: 4 (lower is better) Translates to: TDLPKVTQLVQSSCSPATFSSHY*HCLRHQ Trigger: TTGGTGTCTGAGGCAGTGTCAGTAGTGGCTGGAGAA...AGTGGCTGGAGAACATGAACTCTGTACCAACTGTGTGACCTTGGGCAAGTCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTTCATCAAGGGCTTGCTaGTTGGTTTCAGCTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: RLECSGAISATVTSTSQFSSRAC*LVSAVK Trigger: TTTTACAGCTGAAACCAACCAGCAAGCCCTTGATGA...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR TCA 90 bp | ACGGACTTGCCCAAGGTCACACAGTTGGTACAGAGTTCATGTTCTCCAGCCACTCAGACACCAAGTATCTaGAGTTTTGCTTTGGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: TDLPKVTQLVQSSCSPATQTPSI*SFALVD Trigger: GTCCACCAAAGCAAAACTTCAGATACTTGGTGTCTG...AGTGGCTGGAGAACATGAACTCTGTACCAACTGTGTGACCTTGGGCAAGTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR GCA 90 bp | CACTGCCTCAGACACCAAGTATCTGAAGTTTTGCTTTGGTGGACAAGTGGAAATGGGTGCTGCGTACAGTaGTGCCTGGAAGATCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HCLRHQVSEVLLWWTSGNGCCVQ*CLEDLL Trigger: CAGAAGATCTTCCAGGCAGCACTGTACGCAGCACCC...ATTTCCACTTGTCCACCAAAGCAAAACTTCAGATACTTGGTGTCTGAGGCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR GCA 90 bp | TGCCTCAGACACCAAGTATCTGAAGTTTTGCTTTGGTGGACAAGTGGAAATAGGTGCTGCGTACAGTGCTaGCTGGAAGATCTTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CLRHQVSEVLLWWTSGNRCCVQC*LEDLLH Trigger: GTGCAGAAGATCTTCCAGGCAGCACTGTACGCAGCA...CCTATTTCCACTTGTCCACCAAAGCAAAACTTCAGATACTTGGTGTCTGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CCA 90 bp | CTGAAGTTTTGCTTTGGTGGACAAGTGGAAATAGGTTCCGAGGATTCCAAGAAGGCGTACAGTGCTGCCTaGAAGATCTTCTGCACGATC | + |
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Preference number: 4 (lower is better) Translates to: LKFCFGGQVEIGSEDSKKAYSAA*KIFCTI Trigger: GATCGTGCAGAAGATCTTCCAGGCAGCACTGTACGC...CTTCTTGGAATCCTCGGAACCTATTTCCACTTGTCCACCAAAGCAAAACTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CCA 90 bp | GGAGCACGGACTTGCCCAAGGTCACACAGTTGGTACAGAGTTCATGTTCTCCAGTCTGAAGTTTTGCTTTaGTGGACAAGTGGAAATAGG | + |
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Preference number: 4 (lower is better) Translates to: GARTCPRSHSWYRVHVLQSEVLL*WTSGNR Trigger: CCTATTTCCACTTGTCCACCAAAGCAAAACTTCAGA...CTGGAGAACATGAACTCTGTACCAACTGTGTGACCTTGGGCAAGTCCGTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CCA 90 bp | TGCTTTGGTGGACAAGTGGAAATAGGTTCCGAGGATTCCAAGAAGTCCAGGAACCCAAGGTCACACAGTTaGTACAGAGTTCATGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CFGGQVEIGSEDSKKSRNPRSHS*YRVHVL Trigger: GAGAACATGAACTCTGTACCAACTGTGTGACCTTGG...GTTCCTGGACTTCTTGGAATCCTCGGAACCTATTTCCACTTGTCCACCAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CCA 90 bp | CAAGTATCTGAAGTTTTGCTTTGGTGGACAAGTGGAAATAGGTTCCGAGGATTCGAAGTTTTGCTTTGGTaGACAAGTGGAAATAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: QVSEVLLWWTSGNRFRGFEVLLW*TSGNRF Trigger: GAACCTATTTCCACTTGTCCACCAAAGCAAAACTTC...GAATCCTCGGAACCTATTTCCACTTGTCCACCAAAGCAAAACTTCAGATACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR GCA 90 bp | CAAGTATCTGAAGTTTTGCTTTGGTGGACAAGTGGAAATAGGTTCCGAGGATTCAAGTATCTGAAGTTTTaGTTTGGTGGACAAGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: QVSEVLLWWTSGNRFRGFKYLKF*FGGQVE Trigger: TTCCACTTGTCCACCAAAGCAAAACTTCAGATACTT...GAATCCTCGGAACCTATTTCCACTTGTCCACCAAAGCAAAACTTCAGATACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CAA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTGTGTCGTACACAGCTTaGATTTTCGTGATGTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: RLECSGAISATVTSTSQFVSYTA*IFVMLP Trigger: CGGCAACATCACGAAAATCAAAGCTGTGTACGACAC...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR CAA 90 bp | AGGCTGGAATGCAGTGGCGCGATCTCGGCTACTGTAACCTCCACCTCCCAGTTTTCAAGGGCTTGCTGGTaGGTTTCAGCTGTAAAACAA | + |
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Preference number: 5 (lower is better) Translates to: RLECSGAISATVTSTSQFSRACW*VSAVKQ Trigger: TTGTTTTACAGCTGAAACCAACCAGCAAGCCCTTGA...AAACTGGGAGGTGGAGGTTACAGTAGCCGAGATCGCGCCACTGCATTCCAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318348.9 |
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| CDS-3UTR CAA 90 bp | ACGGACTTGCCCAAGGTCACACAGTTGGTACAGAGTTCATGTTCTCCAGCCACTCCCAAGGTCACACAGTaGGTACAGAGTTCATGTTCT | + |
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Preference number: 5 (lower is better) Translates to: TDLPKVTQLVQSSCSPATPKVTQ*VQSSCS Trigger: AGAACATGAACTCTGTACCAACTGTGTGACCTTGGG...AGTGGCTGGAGAACATGAACTCTGTACCAACTGTGTGACCTTGGGCAAGTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CAA 90 bp | ACGGACTTGCCCAAGGTCACACAGTTGGTACAGAGTTCATGTTCTCCAGCCACTGTGGCAAACCTGATGTaGCTGTCATTATCCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: TDLPKVTQLVQSSCSPATVANLM*LSLSHF Trigger: AAAATGGGATAATGACAGCAACATCAGGTTTGCCAC...AGTGGCTGGAGAACATGAACTCTGTACCAACTGTGTGACCTTGGGCAAGTCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCAGACACCAAGTATCTGAAGTTTTGCTTTGGTGGACAAGTGGAAATAGGCAAGTATCTGAAGTTTaGCTTTGGTGGACAAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: CLRHQVSEVLLWWTSGNRQVSEV*LWWTSG Trigger: TCCACTTGTCCACCAAAGCAAAACTTCAGATACTTG...CCTATTTCCACTTGTCCACCAAAGCAAAACTTCAGATACTTGGTGTCTGAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS-3UTR CAA 90 bp | CTGAAGTTTTGCTTTGGTGGACAAGTGGAAATAGGTTCCGAGGATTCCAAGAAGGTGTCGTACACAGCTTaGATTTTCTTATATGATCCT | + |
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Preference number: 5 (lower is better) Translates to: LKFCFGGQVEIGSEDSKKVSYTA*IFLYDP Trigger: AGGATCATATAAGAAAATCAAAGCTGTGTACGACAC...CTTCTTGGAATCCTCGGAACCTATTTCCACTTGTCCACCAAAGCAAAACTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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| CDS CAA 72 bp | GTAGGCCTGGGTCTGAATCCCAGCTTTGCCACGTACTaGCTTGTGACCTTAAGCGAGTCCTTCAACCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VGLGLNPSFATY*LVTLSESFNPS Trigger: AGAGGGGTTGAAGGACTCGCTTAAGGTCACAAGCAAGTACGTGGCAAAGCTGGGATTCAGACCCAGGCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537066.2 |
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