Pregenerated sensors for GLRX (Homo sapiens)
Ensembl gene IDs: ENSG00000173221Ensembl transcript IDs: ENST00000237858.11, ENST00000379979.8, ENST00000507412.1, ENST00000507605.1, ENST00000508780.5, ENST00000512469.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TACACAGTGTTCAGGATTATCTGGATAGCCATCTTAAATAACAGAGTGTTCCGCACAGAGTGTTCCGCATaGCCACAGCCTCTGCACTTG | + |
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Preference number: 2 (lower is better) Translates to: YTVFRIIWIAILNNRVFRTECSA*PQPLHL Trigger: CAAGTGCAGAGGCTGTGGTCATGCGGAACACTCTGT...GCGGAACACTCTGTTATTTAAGATGGCTATCCAGATAATCCTGAACACTGTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000237858.11 ENST00000379979.8 |
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| 3UTR CCA 72 bp | GCTTTCTCGAGTATTCAAGAGAGTAGCTGCGTGGGATaGCATGCACTTATAATCCCAGTGACTTGGAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: AFSSIQESSCVG*HALIIPVTWKA Trigger: AGCCTTCCAAGTCACTGGGATTATAAGTGCATGCCATCCCACGCAGCTACTCTCTTGAATACTCGAGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508780.5 |
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| CDS-3UTR CCA 90 bp | AACAAACCACGACAGAAGAATTCCACGGTCTCCCATGTTCCTGGCCCAGCACCTCCTGCCACTCACCTGTaGTTACTGCAGAGCTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: NKPRQKNSTVSHVPGPAPPATHL*LLQSSN Trigger: ATTGGAGCTCTGCAGTAACCACAGGTGAGTGGCAGG...AGGTGCTGGGCCAGGAACATGGGAGACCGTGGAATTCTTCTGTCGTGGTTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512469.2 |
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| CDS-3UTR CCA 90 bp | CCCAACCAGAATGCTGTCATACAGTATAACAAACCACGACAGAAGAATTCCACGGGTCTCCCATGTTCCTaGCCCAGCACCTCACCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PNQNAVIQYNKPRQKNSTGLPCS*PSTSPA Trigger: GGCAGGTGAGGTGCTGGGCCAGGAACATGGGAGACC...CGTGGAATTCTTCTGTCGTGGTTTGTTATACTGTATGACAGCATTCTGGTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512469.2 |
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| CDS-3UTR CCA 90 bp | GGATGGCATGCACTTATAATCCCAGTGACTTGGAAGGCTGAGGCGGGAGGATCCGATACTCCATTTCTGTaGTTACTGCAGAGCTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: GWHALIIPVTWKAEAGGSDTPFL*LLQSSN Trigger: ATTGGAGCTCTGCAGTAACCACAGAAATGGAGTATC...GGATCCTCCCGCCTCAGCCTTCCAAGTCACTGGGATTATAAGTGCATGCCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508780.5 |
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| CDS-3UTR TCA 90 bp | ACAGCAGCACGTGTCTTTATTTATAATGGCAGGGCCAAATATAAACACAGTTTTACAGAGTGTTCCGCATaGCCACAGCCTCTGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: TAARVFIYNGRAKYKHSFTECSA*PQPLHL Trigger: CAAGTGCAGAGGCTGTGGTCATGCGGAACACTCTGT...AAAACTGTGTTTATATTTGGCCCTGCCATTATAAATAAAGACACGTGCTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237858.11 |
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| CDS-3UTR TCA 90 bp | TACACAGTGTTCAGGATTATCTGGATAGCCATCTTAAATAACAGAGTGTTCCGCGTTGAACATTTCCTATaGGATCTGTGGTTACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: YTVFRIIWIAILNNRVFRVEHFL*DLWLLQ Trigger: CTGCAGTAACCACAGATCTCATAGGAAATGTTCAAC...GCGGAACACTCTGTTATTTAAGATGGCTATCCAGATAATCCTGAACACTGTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237858.11 |
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| CDS GCA 90 bp | CGAGGCACCCTGCCGCACAGCAGACATCAGCTGTACTCCCTCTTCTaGCCCGTGAAGACCTTTGGCTGCAGTGCCGCCGCTCATTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: RGTLPHSRHQLYSLF*PVKTFGCSAAAHSS Trigger: ACTTGAATGAGCGGCGGCACTGCAGCCAAAGGTCTTCACGGGGCAGAAGAGGGAGTACAGCTGATGTCTGCTGTGCGGCAGGGTGCCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS TCA 90 bp | TCCCCTCCTGTCCCTTCCCGTCCCAGCCTCCTCTTTAGAGGAACTTaGGAGTCCGCTACTGTCAAGGAGAGGAAAGAACTGCCACCCCAA | + |
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Preference number: 5 (lower is better) Translates to: SPPVPSRPSLLFRGT*ESATVKERKELPPQ Trigger: TTGGGGTGGCAGTTCTTTCCTCTCCTTGACAGTAGCGGACTCTCAAGTTCCTCTAAAGAGGAGGCTGGGACGGGAAGGGACAGGAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS TCA 90 bp | GATGAGGGTGCGTCACCCACGCCAAGCCACAGTCATGACACCTGCTaGATAGGCTCCTCTCTAGTTACACACTTCCTCCCTGCTGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: DEGASPTPSHSHDTC*IGSSLVTHFLPAAR Trigger: CCTAGCAGCAGGGAGGAAGTGTGTAACTAGAGAGGAGCCTATTCAGCAGGTGTCATGACTGTGGCTTGGCGTGGGTGACGCACCCTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS TCA 90 bp | GGGCTTTTAGAATCGCGAGGGAGGAGGAAATACCCTCAACGTGGCTaGATTTATAGGCCAGGAGTGTTCCACCAAGGCTGCCTGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: GLLESRGRRKYPQRG*IYRPGVFHQGCLAV Trigger: CACTGCCAGGCAGCCTTGGTGGAACACTCCTGGCCTATAAATTCAGCCACGTTGAGGGTATTTCCTCCTCCCTCGCGATTCTAAAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 90 bp | AACTACTATAGCCTCCCAATGTCTCCCAGCTTCAACCTTCACCTTTaGCCTACTGTCTCTTCTCCCCACAGCTGCCAGAGTGGCCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: NYYSLPMSPSFNLHL*PTVSSPHSCQSGPF Trigger: GAAAGGGCCACTCTGGCAGCTGTGGGGAGAAGAGACAGTAGGGCAAAGGTGAAGGTTGAAGCTGGGAGACATTGGGAGGCTATAGTAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 90 bp | CCCCTAACGGGAGCTGAATGGCAGGCTGTACAGACGGCACGGGGGTaGTGTGGCAGTGAAACCAAAGCAAGAAGTACTGTTGATAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: PLTGAEWQAVQTARG*CGSETKARSTVDKV Trigger: AACTTTATCAACAGTACTTCTTGCTTTGGTTTCACTGCCACAGCACCCCCGTGCCGTCTGTACAGCCTGCCATTCAGCTCCCGTTAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 90 bp | CTCTCAGACCTCACCTCCACTAACTCTCCTACTGGCTCACAGTGCTaGAACTATACTGGCTTCCTTACTATTCCACAAACCTGCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LSDLTSTNSPTGSQC*NYTGFLTIPQTCQA Trigger: TGCCTGGCAGGTTTGTGGAATAGTAAGGAAGCCAGTATAGTTGCAGCACTGTGAGCCAGTAGGAGAGTTAGTGGAGGTGAGGTCTGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS TCA 90 bp | ACTCCTCGGCTACCTCCCTGGTATAAGCCACCTTCATCTGTCACCTaGATAACTACTATAGCCTCCCAATGTCTCCCAGCTTCAACCTTC | + |
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Preference number: 5 (lower is better) Translates to: TPRLPPWYKPPSSVT*ITTIASQCLPASTF Trigger: GAAGGTTGAAGCTGGGAGACATTGGGAGGCTATAGTAGTTATTCAGGTGACAGATGAAGGTGGCTTATACCAGGGAGGTAGCCGAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 90 bp | TACTATTCCACAAACCTGCCAGGCAAACGTCTACCCCAGGACCTTTaGATTCACTCTACCTGTAAATTGTGTACACCCATCTCCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: YYSTNLPGKRLPQDL*IHSTCKLCTPISLS Trigger: GCTGAGGGAGATGGGTGTACACAATTTACAGGTAGAGTGAATGCAAAGGTCCTGGGGTAGACGTTTGCCTGGCAGGTTTGTGGAATAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS TCA 90 bp | GTGGTGGTGATGACTGCACAGCAGTGTGAATGTACTTCATGCCAATaGATCATATACTTAAAAGTGGTTAAAATGGGCCGGATGTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VVVMTAQQCECTSCQ*IIYLKVVKMGRMWR Trigger: CCGCCACATCCGGCCCATTTTAACCACTTTTAAGTATATGATTCATTGGCATGAAGTACATTCACACTGCTGTGCAGTCATCACCACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS CCA 90 bp | GGGTCACAGCAATCAGGAAGGAAGGAGTTCGTTTCTAAATACAGCTaGAAAAGTATTTGCATTACGTCTCTGATTTTTCAGGTCCATGGT | + |
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Preference number: 5 (lower is better) Translates to: GSQQSGRKEFVSKYS*KSICITSLIFQVHG Trigger: ACCATGGACCTGAAAAATCAGAGACGTAATGCAAATACTTTTCCAGCTGTATTTAGAAACGAACTCCTTCCTTCCTGATTGCTGTGACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 90 bp | TCAGGAAGGAAGGAGTTCGTTTCTAAATACAGCTGGAAAAGTATTTaGATTACGTCTCTGATTTTTCAGGTCCATGGTTTATTAAGTACA | + |
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Preference number: 5 (lower is better) Translates to: SGRKEFVSKYSWKSI*ITSLIFQVHGLLST Trigger: TGTACTTAATAAACCATGGACCTGAAAAATCAGAGACGTAATGCAAATACTTTTCCAGCTGTATTTAGAAACGAACTCCTTCCTTCCTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 72 bp | CTGCCGCACAGCAGACATCAGCTGTACTCCCTCTTCTaGCCCGTGAAGACCTTTGGCTGCAGTGCCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: LPHSRHQLYSLF*PVKTFGCSAAA Trigger: AGCGGCGGCACTGCAGCCAAAGGTCTTCACGGGGCAGAAGAGGGAGTACAGCTGATGTCTGCTGTGCGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS TCA 72 bp | ACAGCAGACATCAGCTGTACTCCCTCTTCTGCCCCGTaGAGACCTTTGGCTGCAGTGCCGCCGCTCATTCAA | + |
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Preference number: 6 (lower is better) Translates to: TADISCTPSSAP*RPLAAVPPLIQ Trigger: TTGAATGAGCGGCGGCACTGCAGCCAAAGGTCTTCACGGGGCAGAAGAGGGAGTACAGCTGATGTCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS TCA 72 bp | GCGTCACCCACGCCAAGCCACAGTCATGACACCTGCTaGATAGGCTCCTCTCTAGTTACACACTTCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: ASPTPSHSHDTC*IGSSLVTHFLP Trigger: AGGGAGGAAGTGTGTAACTAGAGAGGAGCCTATTCAGCAGGTGTCATGACTGTGGCTTGGCGTGGGTGACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 72 bp | GGAGCTGAATGGCAGGCTGTACAGACGGCACGGGGGTaGTGTGGCAGTGAAACCAAAGCAAGAAGTACTGTT | + |
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Preference number: 6 (lower is better) Translates to: GAEWQAVQTARG*CGSETKARSTV Trigger: AACAGTACTTCTTGCTTTGGTTTCACTGCCACAGCACCCCCGTGCCGTCTGTACAGCCTGCCATTCAGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CCA 72 bp | AGGCTGCTCCCAGCGTGGAGTTTTGTGCTCAGTGTCTaGCAAAGAAGCGAAAGGCTCCTTTACCCTCACACC | + |
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Preference number: 6 (lower is better) Translates to: RLLPAWSFVLSV*QRSERLLYPHT Trigger: GGTGTGAGGGTAAAGGAGCCTTTCGCTTCTTTGCCAGACACTGAGCACAAAACTCCACGCTGGGAGCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS TCA 72 bp | GTCCCTTCCCGTCCCAGCCTCCTCTTTAGAGGAACTTaGGAGTCCGCTACTGTCAAGGAGAGGAAAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: VPSRPSLLFRGT*ESATVKERKEL Trigger: CAGTTCTTTCCTCTCCTTGACAGTAGCGGACTCTCAAGTTCCTCTAAAGAGGAGGCTGGGACGGGAAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS TCA 72 bp | GAATCGCGAGGGAGGAGGAAATACCCTCAACGTGGCTaGATTTATAGGCCAGGAGTGTTCCACCAAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ESRGRRKYPQRG*IYRPGVFHQGC Trigger: GCAGCCTTGGTGGAACACTCCTGGCCTATAAATTCAGCCACGTTGAGGGTATTTCCTCCTCCCTCGCGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CAA 90 bp | CGGCACGGGGGTGCTGTGGCAGTGAAACCAAAGCAAGAAGTACTGTaGATAAAGTTGAGCAAAGAAGAGGAAATACCCTGTGCTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RHGGAVAVKPKQEVL*IKLSKEEEIPCAAS Trigger: GGAAGCAGCACAGGGTATTTCCTCTTCTTTGCTCAACTTTATCAACAGTACTTCTTGCTTTGGTTTCACTGCCACAGCACCCCCGTGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 72 bp | TGTGTACACCCATCTCCCTCAGCTCCTATAGATATCTaGTCGAATGTTCCCTTCTCAGTGAGACCCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: CVHPSPSAPIDI*SNVPFSVRPNG Trigger: GCCATTGGGTCTCACTGAGAAGGGAACATTCGAGCAGATATCTATAGGAGCTGAGGGAGATGGGTGTACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 72 bp | CTTGAGAGTCCGCTACTGTCAAGGAGAGGAAAGAACTaGCACCCCAAAACGAGTTTGGTAATCCTGTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LESPLLSRRGKN*HPKTSLVILWF Trigger: GAACCACAGGATTACCAAACTCGTTTTGGGGTGGCAGTTCTTTCCTCTCCTTGACAGTAGCGGACTCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS TCA 72 bp | CTACCTCCCTGGTATAAGCCACCTTCATCTGTCACCTaGATAACTACTATAGCCTCCCAATGTCTCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LPPWYKPPSSVT*ITTIASQCLPA Trigger: AGCTGGGAGACATTGGGAGGCTATAGTAGTTATTCAGGTGACAGATGAAGGTGGCTTATACCAGGGAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS TCA 72 bp | TCTGGACAACTGCAAAACTGCCATAAATCGTATCAGTaGATGGTACCCCTAACGGGAGCTGAATGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SGQLQNCHKSYQ*MVPLTGAEWQA Trigger: AGCCTGCCATTCAGCTCCCGTTAGGGGTACCATTCACTGATACGATTTATGGCAGTTTTGCAGTTGTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 72 bp | ACAAACCTGCCAGGCAAACGTCTACCCCAGGACCTTTaGATTCACTCTACCTGTAAATTGTGTACACCCATC | + |
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Preference number: 6 (lower is better) Translates to: TNLPGKRLPQDL*IHSTCKLCTPI Trigger: GATGGGTGTACACAATTTACAGGTAGAGTGAATGCAAAGGTCCTGGGGTAGACGTTTGCCTGGCAGGTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 72 bp | TGCAACTATACTGGCTTCCTTACTATTCCACAAACCTaGCAGGCAAACGTCTACCCCAGGACCTTTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: CNYTGFLTIPQT*QANVYPRTFAF Trigger: GAATGCAAAGGTCCTGGGGTAGACGTTTGCCTGGCAGGTTTGTGGAATAGTAAGGAAGCCAGTATAGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CCA 72 bp | TATCTGCTCGAATGTTCCCTTCTCAGTGAGACCCAATaGCTCCATTTAAAACTGGACCCTGATGCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: YLLECSLLSETQ*LHLKLDPDASS Trigger: GGAGGAAGCATCAGGGTCCAGTTTTAAATGGAGCCATTGGGTCTCACTGAGAAGGGAACATTCGAGCAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CAA 90 bp | GGTGCTGTGGCAGTGAAACCAAAGCAAGAAGTACTGTTGATAAAGTaGAGCAAAGAAGAGGAAATACCCTGTGCTGCTTCCCCTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GAVAVKPKQEVLLIK*SKEEEIPCAASPPV Trigger: GACAGGAGGGGAAGCAGCACAGGGTATTTCCTCTTCTTTGCTCAACTTTATCAACAGTACTTCTTGCTTTGGTTTCACTGCCACAGCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CAA 72 bp | TCAAGGAGAGGAAAGAACTGCCACCCCAAAACGAGTTaGGTAATCCTGTGGTTCTTATTCTCCTGCACTAGG | + |
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Preference number: 6 (lower is better) Translates to: SRRGKNCHPKTS*VILWFLFSCTR Trigger: CCTAGTGCAGGAGAATAAGAACCACAGGATTACCAAACTCGTTTTGGGGTGGCAGTTCTTTCCTCTCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS GCA 72 bp | CCTTTACCCTCACACCCATCCTCTAGTCTGGACAACTaGAAAACTGCCATAAATCGTATCAGTGAATGGTAC | + |
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Preference number: 6 (lower is better) Translates to: PLPSHPSSSLDN*KTAINRISEWY Trigger: GTACCATTCACTGATACGATTTATGGCAGTTTTGCAGTTGTCCAGACTAGAGGATGGGTGTGAGGGTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CCA 72 bp | GCTGGGGAAAGGGGGAAACAGGGAGTTAGTGTTTATTaGGTACAGAGTTTCAGTTTGGGAAGAAGAAACATG | + |
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Preference number: 6 (lower is better) Translates to: AGERGKQGVSVY*VQSFSLGRRNM Trigger: CATGTTTCTTCTTCCCAAACTGAAACTCTGTACCCAATAAACACTAACTCCCTGTTTCCCCCTTTCCCCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS CAA 72 bp | CTACCCCAGGACCTTTGCATTCACTCTACCTGTAAATaGTGTACACCCATCTCCCTCAGCTCCTATAGATAT | + |
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Preference number: 6 (lower is better) Translates to: LPQDLCIHSTCK*CTPISLSSYRY Trigger: ATATCTATAGGAGCTGAGGGAGATGGGTGTACACAATTTACAGGTAGAGTGAATGCAAAGGTCCTGGGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CAA 90 bp | ATTAATTCTGGGCTTGCAGCTTTCTGTAGAGTATTTTGGAGCCAGTaGCAGTTGTTTCTGTCAGTGTTAAAGACTGACTTACGGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: INSGLAAFCRVFWSQ*QLFLSVLKTDLRPG Trigger: ACCTGGCCGTAAGTCAGTCTTTAACACTGACAGAAACAACTGCAACTGGCTCCAAAATACTCTACAGAAAGCTGCAAGCCCAGAATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS GCA 72 bp | AAAACAAATCTTGCACATTTCCATGGCTATTCCCTGTaGTCTCACAGGATAACTGAGGCTTTGAAAACCCAC | + |
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Preference number: 6 (lower is better) Translates to: KTNLAHFHGYSL*SHRITEALKTH Trigger: GTGGGTTTTCAAAGCCTCAGTTATCCTGTGAGAGCACAGGGAATAGCCATGGAAATGTGCAAGATTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CAA 72 bp | GGGCTTGCAGCTTTCTGTAGAGTATTTTGGAGCCAGTaGCAGTTGTTTCTGTCAGTGTTAAAGACTGACTTA | + |
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Preference number: 6 (lower is better) Translates to: GLAAFCRVFWSQ*QLFLSVLKTDL Trigger: TAAGTCAGTCTTTAACACTGACAGAAACAACTGCAACTGGCTCCAAAATACTCTACAGAAAGCTGCAAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS TCA 72 bp | TTCACTCTACAGAAACATGTTTCAGAAGGAGAATTCTaGTTGGCTGCAGTCAGACCACCTAGATTGAACTCT | + |
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Preference number: 6 (lower is better) Translates to: FTLQKHVSEGEF*LAAVRPPRLNS Trigger: AGAGTTCAATCTAGGTGGTCTGACTGCAGCCAATCAGAATTCTCCTTCTGAAACATGTTTCTGTAGAGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CCA 72 bp | ATTAATTCTGGGCTTGCAGCTTTCTGTAGAGTATTTTaGAGCCAGTTGCAGTTGTTTCTGTCAGTGTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: INSGLAAFCRVF*SQLQLFLSVLK Trigger: CTTTAACACTGACAGAAACAACTGCAACTGGCTCCAAAATACTCTACAGAAAGCTGCAAGCCCAGAATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS CAA 72 bp | CCAACTCCCAACATACTGTTTTATTACTGTATTTGTTaGTCTCCCCCACTAGAATATAGGTTCAACAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PTPNILFYYCIC*SPPLEYRFNKG Trigger: GCCTTTGTTGAACCTATATTCTAGTGGGGGAGACAAACAAATACAGTAATAAAACAGTATGTTGGGAGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CCA 72 bp | CAATCAGGAAGGAAGGAGTTCGTTTCTAAATACAGCTaGAAAAGTATTTGCATTACGTCTCTGATTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QSGRKEFVSKYS*KSICITSLIFQ Trigger: CTGAAAAATCAGAGACGTAATGCAAATACTTTTCCAGCTGTATTTAGAAACGAACTCCTTCCTTCCTGATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507412.1 |
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| CDS CAA 72 bp | GCAAATGTATTTGTGTTGATTAAATTAATTCTGGGCTaGCAGCTTTCTGTAGAGTATTTTGGAGCCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ANVFVLIKLILG*QLSVEYFGASC Trigger: GCAACTGGCTCCAAAATACTCTACAGAAAGCTGCAAGCCCAGAATTAATTTAATCAACACAAATACATTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS CCA 72 bp | ATCAAAAAGTTAAGCCAGATACTGGAATCTGTGCATTaGGAAGATCACAGAAGACAGGTAATGTTATTATGT | + |
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Preference number: 6 (lower is better) Translates to: IKKLSQILESVH*EDHRRQVMLLC Trigger: ACATAATAACATTACCTGTCTTCTGTGATCTTCCCAATGCACAGATTCCAGTATCTGGCTTAACTTTTTGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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| CDS CAA 72 bp | AATCAAAAAGTTAAGCCAGATACTGGAATCTGTGCATaGGGAAGATCACAGAAGACAGGTAATGTTATTATG | + |
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Preference number: 6 (lower is better) Translates to: NQKVKPDTGICA*GRSQKTGNVIM Trigger: CATAATAACATTACCTGTCTTCTGTGATCTTCCCAATGCACAGATTCCAGTATCTGGCTTAACTTTTTGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000507605.1 |
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