RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLOD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000167699

Ensembl transcript IDs: ENST00000301328.9, ENST00000301329.10, ENST00000536578.5, ENST00000571073.5, ENST00000572220.1, ENST00000573137.1, ENST00000574354.5, ENST00000574554.5, ENST00000574581.5, ENST00000575528.5, ENST00000575790.5, ENST00000575800.1, ENST00000575851.5, ENST00000576239.5, ENST00000576419.1, ENST00000576670.1, ENST00000576750.1

Found 446 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCGTCAGGGTCGGCCAGAATGACCACCTGTACTGTTGCTTTCCCTaGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCTGGTTCTC +
Preference number: 1 (lower is better)
Translates to: SVRVGQNDHLYCCFP*GVQAHQGSQNLLVL
Trigger: GAGAACCAGAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR TCA 90 bp GCTCCACAAGGGCGGGGCTCAATAAACGTTTACGAGTGGCTTAAATaGAAGGACGTGCGTGGGCACACCGCGGGGACTAATCGTGTTAGG +
Preference number: 1 (lower is better)
Translates to: APQGRGSINVYEWLK*KDVRGHTAGTNRVR
Trigger: CCTAACACGATTAGTCCCCGCGGTGTGCCCACGCACGTCCTTTCATTTAAGCCACTCGTAAACGTTTATTGAGCCCCGCCCTTGTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576670.1
3UTR GCA 90 bp AATTTCATGTCCGTCAGGGTCGGCCAGAATGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTT +
Preference number: 1 (lower is better)
Translates to: NFMSVRVGQNDHLYC*FPWGVQAHQGSQNL
Trigger: AAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGACATGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR TCA 90 bp AGAAGGCAATTCTTCCAAAAGCTGCTGCATGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCTTACACTGGTTATCAGCATAGCCCA +
Preference number: 1 (lower is better)
Translates to: RRQFFQKLLHGPPHP*RPVAPAYTGYQHSP
Trigger: TGGGCTATGCTGATAACCAGTGTAAGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATTGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
3UTR CCA 90 bp CGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTaGATTCACTTGCACAGCTGCTCTCATAAAAGCTACACGATTCAG +
Preference number: 1 (lower is better)
Translates to: RIVRRWEWHHDKALM*IHLHSCSHKSYTIQ
Trigger: CTGAATCGTGTAGCTTTTATGAGAGCAGCTGTGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR CCA 90 bp TGCCAGAATAAGACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATaGCACCACGACAAGGCATTAATGTGGATTCACTTGCACAGCTGC +
Preference number: 1 (lower is better)
Translates to: CQNKTIEERIVRRWE*HHDKALMWIHLHSC
Trigger: GCAGCTGTGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGTCTTATTCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR GCA 90 bp AGAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATaGCGCTGTCCTAGTCTGGACAATCATCTGTCACTCATCCAACAC +
Preference number: 1 (lower is better)
Translates to: RGNPNYPQSQPKSCS*RCPSLDNHLSLIQH
Trigger: GTGTTGGATGAGTGACAGATGATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR CCA 90 bp AAAACCTGCCAGAATAAGACAATAGAAGAGCGTATCGTCAGGCGCTaGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTTGCAC +
Preference number: 1 (lower is better)
Translates to: KTCQNKTIEERIVRR*EWHHDKALMWIHLH
Trigger: GTGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGTCTTATTCTGGCAGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR GCA 90 bp CAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAAATaGTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGTCGGC +
Preference number: 1 (lower is better)
Translates to: QQFASLWIHLRKFSK*FIPDKANFMSVRVG
Trigger: GCCGACCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR TCA 90 bp GCAGGAATCACAGAGGCTTGCTCTGCATCATGTCTTCCGTTAACCTaGAGCTTTGGGTTTATTGTGTTTGGCAAACCACTCGTCACTTTT +
Preference number: 1 (lower is better)
Translates to: AGITEACSASCLPLT*SFGFIVFGKPLVTF
Trigger: AAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAGGTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR GCA 90 bp AAAACAAAATATATACACAGAAAGAAGCTCGCACAGAGTCAGGCGTaGAGCAACGTCACACACTCATTCCTTTCTGTTTCCTCTGGACAC +
Preference number: 1 (lower is better)
Translates to: KTKYIHRKKLAQSQA*SNVTHSFLSVSSGH
Trigger: GTGTCCAGAGGAAACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTCTGTGTATATATTTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR GCA 90 bp ATTGCCAAGCTTGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTaGGACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTT +
Preference number: 1 (lower is better)
Translates to: IAKLVVSDAIIVSQF*DKMIILRPKSHHCF
Trigger: AAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACAAGCTTGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
3UTR CCA 90 bp GCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTTCTCTACCTaGACTCATGATTGGATTTCATTTCTAAATTACATCAGAGCTTTC +
Preference number: 1 (lower is better)
Translates to: AQSQQQCRLQQAFST*THDWISFLNYIRAF
Trigger: GAAAGCTCTGATGTAATTTAGAAATGAAATCCAATCATGAGTCCAGGTAGAGAACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR CCA 90 bp ATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTaGACAATCATCTGTCACTCATCCAACACAGTTATATACAGAATG +
Preference number: 1 (lower is better)
Translates to: IRNPNQSHVHAAVLV*TIICHSSNTVIYRM
Trigger: CATTCTGTATATAACTGTGTTGGATGAGTGACAGATGATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR CCA 90 bp TGCATCATGTCTTCCGTTAACCTGAAGCTTTGGGTTTATTGTGTTTaGCAAACCACTCGTCACTTTTATCTGCTGCCATTGCATCATCCA +
Preference number: 1 (lower is better)
Translates to: CIMSSVNLKLWVYCV*QTTRHFYLLPLHHP
Trigger: TGGATGATGCAATGGCAGCAGATAAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAGGTTAACGGAAGACATGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR CCA 90 bp GGAAAGCAGAGGTTACGATTTACAAGTAATTCTCTATGTGTTCTTTaGGAACCAGGATCCTCTGAGTCAATCCCTTCCAATCTCCTAAGT +
Preference number: 1 (lower is better)
Translates to: GKQRLRFTSNSLCVL*EPGSSESIPSNLLS
Trigger: ACTTAGGAGATTGGAAGGGATTGACTCAGAGGATCCTGGTTCCCAAAGAACACATAGAGAATTACTTGTAAATCGTAACCTCTGCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301329.10
3UTR CCA 90 bp ACTTTTATCTGCTGCCATTGCATCATCCAACAATTTGCTTCCCTCTaGATCCATCTTAGAAAGTTCTCGAAATGCTTCATCCCCGACAAA +
Preference number: 1 (lower is better)
Translates to: TFICCHCIIQQFASL*IHLRKFSKCFIPDK
Trigger: TTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGCAGCAGATAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR TCA 90 bp CATGATTGGATTTCATTTCTAAATTACATCAGAGCTTTCAAAGATTaGAATACACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGG +
Preference number: 1 (lower is better)
Translates to: HDWISFLNYIRAFKD*NTQICTTQASLPVR
Trigger: CCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGTGTATTTCAATCTTTGAAAGCTCTGATGTAATTTAGAAATGAAATCCAATCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR CAA 90 bp ACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGCGTaGCTGACAGCCTGGCTAGAAGCGAGCGTGATTCCCATAAAGTCA +
Preference number: 2 (lower is better)
Translates to: TPSATSVSGHSSFLA*LTAWLEASVIPIKS
Trigger: TGACTTTATGGGAATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
3UTR-3UTR TCA 90 bp GTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCTGGTTCGCATTTATTGGGAACTaGCACGTCAGGCCTCACAGG +
Preference number: 2 (lower is better)
Translates to: VAFPGVSRLTRGVRIFWFAFIGN*HVRPHR
Trigger: CCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGC...GAACCAGAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575528.5
3UTR-3UTR CCA 90 bp GAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: EARTESGVQQRHTLIPFCRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...ACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CCA 90 bp GCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCAAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: AYRQALGMAPRQGINVDSRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...TGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CCA 90 bp TGCCAGAATAAGACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: CQNKTIEERIVRRWEWHHRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...GTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGTCTTATTCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR TCA 90 bp TTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: LPVRETNQKSIYWELTRQGPPHP*RPVAPA
Trigger: AGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACC...CTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574554.5
3UTR-3UTR CCA 90 bp AAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTGTCAGGCGCTGGGAATaGCACCACGACAAGGCATTA +
Preference number: 2 (lower is better)
Translates to: KLAQSQACSNVTHSFLSVVRRWE*HHDKAL
Trigger: TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGAC...AACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CCA 90 bp ACTCTTTCTGGGGGCAAGAGAAGGCAATTCTTCCAAAAGCTGCTGCATGGTCCATGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: TLSGGKRRQFFQKLLHGPCNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...TGGACCATGCAGCAGCTTTTGGAAGAATTGCCTTCTCTTGCCCCCAGAAAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000575851.5
3UTR-3UTR GCA 90 bp GCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTACCCAAGCCTCCTTaGCTGTACGGGAAACAAATC +
Preference number: 2 (lower is better)
Translates to: AYRQALGMAPRQGINVDSLPKPP*LYGKQI
Trigger: GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAG...TGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR GCA 90 bp GCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTTGCACAGCTGCTACCCAAGCCTCCTTaGCTGTACGGGAAACAAATC +
Preference number: 2 (lower is better)
Translates to: ALGMAPRQGINVDSLAQLLPKPP*LYGKQI
Trigger: GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAG...CAGCTGTGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CCA 90 bp GTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: VSDAIIVSQFCDKMIILRRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...CCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
3UTR-3UTR CCA 90 bp GCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTTGCACAGCTGCAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: ALGMAPRQGINVDSLAQLQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...CAGCTGTGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CCA 90 bp AAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCGCCGCTGTCCTAGTCTaGACAATCATCTGTCACTCA +
Preference number: 2 (lower is better)
Translates to: KEARTESGVQQRHTLIPFAAVLV*TIICHS
Trigger: TGAGTGACAGATGATTGTCCAGACTAGGACAGCGGC...GAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR GCA 90 bp AAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 2 (lower is better)
Translates to: KSEEHLLGTDTSGLTGAGGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...CCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
3UTR-3UTR GCA 90 bp CGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTTGCACAGTTATATACAGAATaGGCAGTCCCAGCAACAGTG +
Preference number: 2 (lower is better)
Translates to: RQALGMAPRQGINVDSLAQLYTE*AVPATV
Trigger: CACTGTTGCTGGGACTGCGCATTCTGTATATAACTG...TGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR GCA 90 bp ACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 2 (lower is better)
Translates to: TNLHYPSLLACTGNKSEEGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...CTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
3UTR-3UTR GCA 90 bp TGCCAGAATAAGACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACCAGTTATATACAGAATaGGCAGTCCCAGCAACAGTG +
Preference number: 2 (lower is better)
Translates to: CQNKTIEERIVRRWEWHHQLYTE*AVPATV
Trigger: CACTGTTGCTGGGACTGCGCATTCTGTATATAACTG...GTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGTCTTATTCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CCA 90 bp CTTAGAAAGTTCTCGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 2 (lower is better)
Translates to: LRKFSKCFIPDKANFMSVRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...GACGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR-3UTR TCA 90 bp TGTCACTCATCCAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGCATTTATTGGGAACTaGCACGTCAGGCCTCACAGG +
Preference number: 2 (lower is better)
Translates to: CHSSNTVIYRMRSPSNSVAFIGN*HVRPHR
Trigger: CCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGC...TACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR GCA 90 bp CAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 2 (lower is better)
Translates to: QASLPVRETNQKSIYWELGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...CAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
3UTR-3UTR GCA 90 bp TCAAGTCTTCTAAGTCTGGCAACTCTTTCTGGGGGCAAGAGAAGGCAATTCTTCGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 2 (lower is better)
Translates to: SSLLSLATLSGGKRRQFFGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...GAAGAATTGCCTTCTCTTGCCCCCAGAAAGAGTTGCCAGACTTAGAAGACTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
3UTR-3UTR GCA 90 bp ATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACAATCCAGTTATATACAGAATaGGCAGTCCCAGCAACAGTG +
Preference number: 2 (lower is better)
Translates to: IRNPNQSHVHAAVLVWTIQLYTE*AVPATV
Trigger: CACTGTTGCTGGGACTGCGCATTCTGTATATAACTG...GATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR GCA 90 bp TGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTTTAAATGAAAGGACGTaGGTGGGCACACCGCGGGGA +
Preference number: 2 (lower is better)
Translates to: CSLRRHNCKSVLRQNDHPLNERT*VGTPRG
Trigger: TCCCCGCGGTGTGCCCACGCACGTCCTTTCATTTAA...AGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576670.1
3UTR-3UTR TCA 90 bp GCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTCTACCTGGACTCATaGTTGGATTTCATTTCTAAA +
Preference number: 2 (lower is better)
Translates to: AYRQALGMAPRQGINVDSLYLDS*LDFISK
Trigger: TTTAGAAATGAAATCCAATCATGAGTCCAGGTAGAG...TGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR GCA 90 bp TTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGCTACCCAAGCCTCCTTaGCTGTACGGGAAACAAATC +
Preference number: 2 (lower is better)
Translates to: LPVRETNQKSIYWELTRQLPKPP*LYGKQI
Trigger: GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAG...CTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
3UTR-3UTR CCA 90 bp CGATTCAGAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: RFRGNPNYPQSQPKSCSCQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...GCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTCTGAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CCA 90 bp AACGTCAAAACCTGCCAGAATAAGACAATAGAAGAGCGTATCGTCAGGCGCTGGCAGGCGTTCTCTACCTaGACTCATGATTGGATTTCA +
Preference number: 2 (lower is better)
Translates to: NVKTCQNKTIEERIVRRWQAFST*THDWIS
Trigger: TGAAATCCAATCATGAGTCCAGGTAGAGAACGCCTG...CCAGCGCCTGACGATACGCTCTTCTATTGTCTTATTCTGGCAGGTTTTGACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CCA 90 bp TTAATACAGGATCTGACTGAGGCAGACTGCGATTCTGCAAATAGAACTTATATCTGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: LIQDLTEADCDSANRTYICNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...GATATAAGTTCTATTTGCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
3UTR CAA 90 bp TCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCATaGTTTTACTCCATTTCCCATCATAAGGCCCATTACAGGCAGCTT +
Preference number: 2 (lower is better)
Translates to: SVLRQNDHPQAQIPP*FYSISHHKAHYRQL
Trigger: AAGCTGCCTGTAATGGGCCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574581.5
ENST00000575851.5
3UTR-3UTR TCA 90 bp CCAGCTTACACTGGTTATCAGCATAGCCCAGCAAAGCCCTTTGCTTTTCTTCATAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: PAYTGYQHSPAKPFAFLHSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...ATGAAGAAAAGCAAAGGGCTTTGCTGGGCTATGCTGATAACCAGTGTAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
3UTR-3UTR GCA 90 bp CTTTGGGTTTATTGTGTTTGGCAAACCACTCGTCACTTTTATCTGCTGCCATTGGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 2 (lower is better)
Translates to: LWVYCVWQTTRHFYLLPLGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...CAATGGCAGCAGATAAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR-3UTR CCA 90 bp ATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCATAAGGCTTCAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: ILRPKSHHCFTPFPIIRLQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...AAGCCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574554.5
3UTR-3UTR TCA 90 bp TCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTCCCATCATAAGGCTTTaGGAAACTGTCTTCTGTTAT +
Preference number: 2 (lower is better)
Translates to: SALPKPPCLYGKQIRRAFPIIRL*ETVFCY
Trigger: ATAACAGAAGACAGTTTCTCAAAGCCTTATGATGGG...AAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574554.5
3UTR-3UTR TCA 90 bp GACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: DKMIILRPKSHHCFTPFPSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...GGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
ENST00000576670.1
3UTR-3UTR GCA 90 bp AGAATCTTCTGGTTCTCCCTTTTCATCAAGTCTTCTAAGTCTGGCAACTCTTTCAATTCTTCCAAAAGCTaGTGCATGGTCCACCCCACC +
Preference number: 2 (lower is better)
Translates to: RIFWFSLFIKSSKSGNSFNSSKS*CMVHPT
Trigger: GGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATT...GAAAGAGTTGCCAGACTTAGAAGACTTGATGAAAAGGGAGAACCAGAAGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000575851.5
3UTR-3UTR GCA 90 bp CACAGAGGCTTGCTCTGCATCATGTCTTCCGTTAACCTGAAGCTTTGGGTTTATCATCATCCAACAATTTaGTTCCCTCTGGATCCATCT +
Preference number: 2 (lower is better)
Translates to: HRGLLCIMSSVNLKLWVYHHPTI*FPLDPS
Trigger: AGATGGATCCAGAGGGAAGCAAATTGTTGGATGATG...ATAAACCCAAAGCTTCAGGTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR-3UTR GCA 90 bp GCTTTGGGTTTATTGTGTTTGGCAAACCACTCGTCACTTTTATCTGCTGCCATTTCTTCAAATTCCTCATaGCGCAGAACCGTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: ALGLLCLANHSSLLSAAISSNSS*RRTVFS
Trigger: GGAAAAGACGGTTCTGCGGCATGAGGAATTTGAAGA...AATGGCAGCAGATAAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574554.5
3UTR-3UTR CCA 90 bp ATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAAATGCTTCCAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: IQQFASLWIHLRKFSKCFQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...GAAGCATTTCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575528.5
3UTR-3UTR CCA 90 bp TCTGGACAATCATCTGTCACTCATCCAACACAGTTATATACAGAATGCGCAGTCCAGGCGTTCTCTACCTaGACTCATGATTGGATTTCA +
Preference number: 2 (lower is better)
Translates to: SGQSSVTHPTQLYTECAVQAFST*THDWIS
Trigger: TGAAATCCAATCATGAGTCCAGGTAGAGAACGCCTG...GACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGACAGATGATTGTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR CAA 90 bp TCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCATaGTTTTACTCCATTTCCCATCATAAGGCTTTGAGAAACTGTCTT +
Preference number: 2 (lower is better)
Translates to: SVLRQNDHPQAQIPP*FYSISHHKALRNCL
Trigger: AAGACAGTTTCTCAAAGCCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
3UTR-3UTR TCA 90 bp ATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: IASSNNLLPSGSILESSRSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...TCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
3UTR-3UTR TCA 90 bp CAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGCTCTACCTGGACTCATaGTTGGATTTCATTTCTAAA +
Preference number: 2 (lower is better)
Translates to: QHSYIQNAQSQQQCRLQQLYLDS*LDFISK
Trigger: TTTAGAAATGAAATCCAATCATGAGTCCAGGTAGAG...CTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR GCA 72 bp TCCGTCAGGGTCGGCCAGAATGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGT +
Preference number: 3 (lower is better)
Translates to: SVRVGQNDHLYC*FPWGVQAHQGS
Trigger: ACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR CCA 72 bp GTCGGCCAGAATGACCACCTGTACTGTTGCTTTCCCTaGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTT +
Preference number: 3 (lower is better)
Translates to: VGQNDHLYCCFP*GVQAHQGSQNL
Trigger: AAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575790.5
ENST00000575851.5
3UTR TCA 72 bp GGGCGGGGCTCAATAAACGTTTACGAGTGGCTTAAATaGAAGGACGTGCGTGGGCACACCGCGGGGACTAAT +
Preference number: 3 (lower is better)
Translates to: GRGSINVYEWLK*KDVRGHTAGTN
Trigger: ATTAGTCCCCGCGGTGTGCCCACGCACGTCCTTTCATTTAAGCCACTCGTAAACGTTTATTGAGCCCCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576670.1
3UTR-3UTR CAA 90 bp GCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCTGGTTCTCCTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 3 (lower is better)
Translates to: AFPGVSRLTRGVRIFWFSSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...GGAGAACCAGAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575528.5
3UTR-3UTR CAA 90 bp CTCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTACTACCCAAGCCTCCTaGCCTGTACGGGAAACAAAT +
Preference number: 3 (lower is better)
Translates to: LPGPRFQKHLLQLPSVATTTQAS*PVRETN
Trigger: ATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGT...AGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574554.5
3UTR TCA 72 bp TTCTTCCAAAAGCTGCTGCATGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCTTACACTGGTTATCAG +
Preference number: 3 (lower is better)
Translates to: FFQKLLHGPPHP*RPVAPAYTGYQ
Trigger: CTGATAACCAGTGTAAGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
3UTR TCA 72 bp CAAAGCAAATTTCATGTCCGTCAGGGTCGGCCAGAATaGCCACCTGTACTGTTGCTTTCCCTGGGGTGTCCA +
Preference number: 3 (lower is better)
Translates to: QSKFHVRQGRPE*PPVLLLSLGCP
Trigger: TGGACACCCCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGACATGAAATTTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR-3UTR CAA 90 bp GAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 3 (lower is better)
Translates to: EARTESGVQQRHTLIPFCRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...ACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp GCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCAAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 3 (lower is better)
Translates to: AYRQALGMAPRQGINVDSRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...TGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp TGTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCTGGTTTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 3 (lower is better)
Translates to: CCFPWGVQAHQGSQNLLVSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...AACCAGAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575528.5
3UTR-3UTR CAA 90 bp CCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 3 (lower is better)
Translates to: PGPRFQKHLLQLPSVATPAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...TGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
3UTR-3UTR CAA 90 bp AATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTTCTCTACCTGGACTACTACCCAAGCCTCCTaGCCTGTACGGGAAACAAAT +
Preference number: 3 (lower is better)
Translates to: NAQSQQQCRLQQAFSTWTTTQAS*PVRETN
Trigger: ATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGT...AGTCCAGGTAGAGAACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp AATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 3 (lower is better)
Translates to: NRRAYRQALGMAPRQGINRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...ATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp AAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 3 (lower is better)
Translates to: KSEEHLLGTDTSGLTGAGRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...CCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
3UTR CCA 72 bp AGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTaGATTCACTTGCACAGCTGCTCTCATAAAAGCTAC +
Preference number: 3 (lower is better)
Translates to: RRWEWHHDKALM*IHLHSCSHKSY
Trigger: GTAGCTTTTATGAGAGCAGCTGTGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp TCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 3 (lower is better)
Translates to: SALPKPPCLYGKQIRRAFRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...AAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
3UTR-3UTR CAA 90 bp AATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 3 (lower is better)
Translates to: NRRAYRQALGMAPRQGINSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...ATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp AGGCAGACTGCGATTCTGCAAATAGAACTTATATCCTCCCGGGGCCTCGGTTTCGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 3 (lower is better)
Translates to: RQTAILQIELISSRGLGFAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...GAAACCGAGGCCCCGGGAGGATATAAGTTCTATTTGCAGAATCGCAGTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
3UTR GCA 72 bp CCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATaGCGCTGTCCTAGTCTGGACAATCATCTGTCACTC +
Preference number: 3 (lower is better)
Translates to: PNYPQSQPKSCS*RCPSLDNHLSL
Trigger: GAGTGACAGATGATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR CCA 72 bp AAGACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATaGCACCACGACAAGGCATTAATGTGGATTCACTTG +
Preference number: 3 (lower is better)
Translates to: KTIEERIVRRWE*HHDKALMWIHL
Trigger: CAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp ACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 3 (lower is better)
Translates to: TVIYRMRSPSNSVDYSRRSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...ACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp TGTCACTCATCCAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAACTACCCAAGCCTCCTaGCCTGTACGGGAAACAAAT +
Preference number: 3 (lower is better)
Translates to: CHSSNTVIYRMRSPSNSVTTQAS*PVRETN
Trigger: ATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGT...TACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp AGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGCAGAGCTTTCAAAGATaGAAATACACAAATCTGCAC +
Preference number: 3 (lower is better)
Translates to: RSSHRVRRAATSHTHSFLQSFQR*KYTNLH
Trigger: GTGCAGATTTGTGTATTTCAATCTTTGAAAGCTCTG...CAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR GCA 72 bp TATATACACAGAAAGAAGCTCGCACAGAGTCAGGCGTaGAGCAACGTCACACACTCATTCCTTTCTGTTTCC +
Preference number: 3 (lower is better)
Translates to: YIHRKKLAQSQA*SNVTHSFLSVS
Trigger: GGAAACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTCTGTGTATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR CCA 72 bp CAGAATAAGACAATAGAAGAGCGTATCGTCAGGCGCTaGGAATGGCACCACGACAAGGCATTAATGTGGATT +
Preference number: 3 (lower is better)
Translates to: QNKTIEERIVRR*EWHHDKALMWI
Trigger: AATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGTCTTATTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp AAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCCAGAGCTTTCAAAGATaGAAATACACAAATCTGCAC +
Preference number: 3 (lower is better)
Translates to: KEARTESGVQQRHTLIPFQSFQR*KYTNLH
Trigger: GTGCAGATTTGTGTATTTCAATCTTTGAAAGCTCTG...GAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR TCA 72 bp ACAGAGGCTTGCTCTGCATCATGTCTTCCGTTAACCTaGAGCTTTGGGTTTATTGTGTTTGGCAAACCACTC +
Preference number: 3 (lower is better)
Translates to: TEACSASCLPLT*SFGFIVFGKPL
Trigger: GAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAGGTTAACGGAAGACATGATGCAGAGCAAGCCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR GCA 72 bp GCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAAATaGTTCATCCCCGACAAAGCAAATTTCATGTCCGTC +
Preference number: 3 (lower is better)
Translates to: ASLWIHLRKFSK*FIPDKANFMSV
Trigger: GACGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAGATGGATCCAGAGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR CCA 72 bp CCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTaGACAATCATCTGTCACTCATCCAACACAGTTATA +
Preference number: 3 (lower is better)
Translates to: PNQSHVHAAVLV*TIICHSSNTVI
Trigger: TATAACTGTGTTGGATGAGTGACAGATGATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR-3UTR CAA 90 bp CAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAAATGCTTCATCTCTAAGTCTGGCAACTaGAGGAAAACAGAGGCAACG +
Preference number: 3 (lower is better)
Translates to: QQFASLWIHLRKFSKCFISKSGN*RKTEAT
Trigger: CGTTGCCTCTGTTTTCCTCAAGTTGCCAGACTTAGA...GATGAAGCATTTCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575528.5
3UTR CCA 72 bp TCTTCCGTTAACCTGAAGCTTTGGGTTTATTGTGTTTaGCAAACCACTCGTCACTTTTATCTGCTGCCATTG +
Preference number: 3 (lower is better)
Translates to: SSVNLKLWVYCV*QTTRHFYLLPL
Trigger: CAATGGCAGCAGATAAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAGGTTAACGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR-3UTR CAA 90 bp AGCAGAGGTTACGATTTACAAGTAATTCTCTATGTGTTCTTTGGGAACCAGGATTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 3 (lower is better)
Translates to: SRGYDLQVILYVFFGNQDSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...ATCCTGGTTCCCAAAGAACACATAGAGAATTACTTGTAAATCGTAACCTCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301329.10
3UTR-3UTR CAA 90 bp AGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGTCCCATCATAAGGCTTaGAGAAACTGTCTTCTGTTA +
Preference number: 3 (lower is better)
Translates to: SLRRHNCKSVLRQNDHPQSHHKA*RNCLLL
Trigger: TAACAGAAGACAGTTTCTCAAAGCCTTATGATGGGA...CTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
3UTR-3UTR CAA 90 bp GATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCATAAGTCCCATCATAAGGCTTaGAGAAACTGTCTTCTGTTA +
Preference number: 3 (lower is better)
Translates to: DHPQAQIPPLFYSISHHKSHHKA*RNCLLL
Trigger: TAACAGAAGACAGTTTCTCAAAGCCTTATGATGGGA...CTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
3UTR CCA 72 bp ACCTGGCCACCACTTTACATGATGAGACTTAGAGACTaGTATCACAGCTTGATTTCAGAAGCTTACTTTCAA +
Preference number: 3 (lower is better)
Translates to: TWPPLYMMRLRD*YHSLISEAYFQ
Trigger: TTGAAAGTAAGCTTCTGAAATCAAGCTGTGATACCAGTCTCTAAGTCTCATCATGTAAAGTGGTGGCCAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301329.10
3UTR-3UTR CAA 90 bp CAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGCAGAGCTTTCAAAGATaGAAATACACAAATCTGCAC +
Preference number: 3 (lower is better)
Translates to: QHSYIQNAQSQQQCRLQQQSFQR*KYTNLH
Trigger: GTGCAGATTTGTGTATTTCAATCTTTGAAAGCTCTG...CTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
3UTR GCA 72 bp ATTGAAATACACAAATCTGCACTACCCAAGCCTCCTTaGCTGTACGGGAAACAAATCAGAAGAGCATTTATT +
Preference number: 3 (lower is better)
Translates to: IEIHKSALPKPP*LYGKQIRRAFI
Trigger: AATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGTGTATTTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
3UTR CCA 72 bp CAGCAACAGTGTAGATTACAGCAGGCGTTCTCTACCTaGACTCATGATTGGATTTCATTTCTAAATTACATC +
Preference number: 3 (lower is better)
Translates to: QQQCRLQQAFST*THDWISFLNYI
Trigger: GATGTAATTTAGAAATGAAATCCAATCATGAGTCCAGGTAGAGAACGCCTGCTGTAATCTACACTGTTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp CCTCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPGASVSKTPSATSVSGHGPPHP*RPVAPA
Trigger: AGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACC...GTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
3UTR CAA 72 bp GCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGCGTaGCTGACAGCCTGGCTAGAAGCGAGCGTGATTCCC +
Preference number: 4 (lower is better)
Translates to: ATSVSGHSSFLA*LTAWLEASVIP
Trigger: GGGAATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp GAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGAACTCTGCGAGCAGCCATaGTTCCCGCCGCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: EEHLLGTDTSGLTGAGQELCEQP*FPPHAA
Trigger: GGCTGCGTGCGGCGGGAATCATGGCTGCTCGCAGAG...TTCCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp TGTACTGTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CTVAFPGVSRLTRGVRIFGPPHP*RPVAPA
Trigger: AGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACC...GAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACAGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp TGCCAGAATAAGACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACGGCGCGCTTTCGTaGCGCAGCCCGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: CQNKTIEERIVRRWEWHHDGALS*RSPGLR
Trigger: CCTGAGACCCGGGCTGCGTCACGAAAGCGCGCCGTC...GTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGTCTTATTCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR GCA 90 bp AGAAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTCCAGGCTTGGGACCTTaGGCGAGGCGCTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: RKKLAQSQACSNVTHSFLPGLGP*ARRWVR
Trigger: CCGGACCCAGCGCCTCGCGCAAGGTCCCAAGCCTGG...AAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR TCA 90 bp AATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCCTCTGCGAGCAGCCATaGTTCCCGCCGCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: NQKSIYWELTRQASQVLGLCEQP*FPPHAA
Trigger: GGCTGCGTGCGGCGGGAATCATGGCTGCTCGCAGAG...GCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp TTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGCGTTCTCTGCGAGCAGCCATaGTTCCCGCCGCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: FKNTFCNFRQWPLQLPGVLCEQP*FPPHAA
Trigger: GGCTGCGTGCGGCGGGAATCATGGCTGCTCGCAGAG...AACGCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572220.1
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp AAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KLAQSQACSNVTHSFLSVGPPHP*RPVAPA
Trigger: AGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACC...AACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp ACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TIEERIVRRWEWHHDKALGPPHP*RPVAPA
Trigger: AGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACC...TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp AATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NQKSIYWELTRQASQVLGGPPHP*RPVAPA
Trigger: AGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACC...GCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR TCA 90 bp AAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTACATGGCGGCGCTGGTaGGACCCGCGAGGTTTGTCG +
Preference number: 4 (lower is better)
Translates to: KLAQSQACSNVTHSFLSVTWRRW*DPRGLS
Trigger: CGACAAACCTCGCGGGTCTCACCAGCGCCGCCATGT...AACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR GCA 90 bp ATGACCACCTGTACTGTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: MTTCTVAFPGVSRLTRGVDHLYC*FPWGVQ
Trigger: CTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTC...GACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CCA 90 bp ACCTGTACTGTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TCTVAFPGVSRLTRGVRICNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...GATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACAGTACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CCA 90 bp AAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTCAGGTGGTCCAGGCTTaGGACCTTGCGCGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KLAQSQACSNVTHSFLSVQVVQA*DLARGA
Trigger: AGCGCCTCGCGCAAGGTCCCAAGCCTGGACCACCTG...AACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR TCA 90 bp ACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACAGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TIRNPNQSHVHAAVLVWTGPPHP*RPVAPA
Trigger: AGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACC...TGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp TCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRGLGFKNTFCNFRQWPLDHLYC*FPWGVQ
Trigger: CTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTC...GAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CCA 90 bp TTCATGTCCGTCAGGGTCGGCCAGAATGACCACCTGTACTGTTGCTTTCCCTGGCCAAAAGCTGCTGCATaGTCCACCCCACCCTTGACG +
Preference number: 4 (lower is better)
Translates to: FMSVRVGQNDHLYCCFPWPKAAA*STPPLT
Trigger: CGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGG...CCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGACATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CCA 90 bp GGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTCCAAAAGCTGCTGCATaGTCCACCCCACCCTTGACG +
Preference number: 4 (lower is better)
Translates to: GPRFQKHLLQLPSVATPAPKAAA*STPPLT
Trigger: CGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGG...AGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp CAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGCTCTGCGAGCAGCCATaGTTCCCGCCGCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: QASLPVRETNQKSIYWELLCEQP*FPPHAA
Trigger: GGCTGCGTGCGGCGGGAATCATGGCTGCTCGCAGAG...CAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp GCCAAGCTTGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGCTCTGCGAGCAGCCATaGTTCCCGCCGCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: AKLVVSDAIIVSQFCDKMLCEQP*FPPHAA
Trigger: GGCTGCGTGCGGCGGGAATCATGGCTGCTCGCAGAG...CATTTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACAAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572220.1
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CCA 90 bp GCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTTGCACAGCTGCCAAAAGCTGCTGCATaGTCCACCCCACCCTTGACG +
Preference number: 4 (lower is better)
Translates to: ALGMAPRQGINVDSLAQLPKAAA*STPPLT
Trigger: CGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGG...CAGCTGTGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp AGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGCCAAAAGCTGCTGCATaGTCCACCCCACCCTTGACG +
Preference number: 4 (lower is better)
Translates to: RSSHRVRRAATSHTHSFLPKAAA*STPPLT
Trigger: CGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGG...CAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp CAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGGTCAGGCGCTGGGAATaGCACCACGACAAGGCATTA +
Preference number: 4 (lower is better)
Translates to: QKSIYWELTRQASQVLGRVRRWE*HHDKAL
Trigger: TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGAC...CCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp AGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGCGTATCGTCAGGCGCTaGGAATGGCACCACGACAAG +
Preference number: 4 (lower is better)
Translates to: RSSHRVRRAATSHTHSFLRIVRR*EWHHDK
Trigger: CTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACG...CAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp TCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCAGCGGTTTCCCACTTTaGATACGAAGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SRGLGFKNTFCNFRQWPLSGFPL*IRSAEL
Trigger: GAGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCT...GAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp GAAAGTTCTCGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ESSRNASSPTKQISCPSGGPPHP*RPVAPA
Trigger: AGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACC...CCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp TCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCAATTCTTCCAAAAGCTaGTGCATGGTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: SRGLGFKNTFCNFRQWPLNSSKS*CMVHPT
Trigger: GGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATT...GAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp GAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EARTESGVQQRHTLIPFCDHLYC*FPWGVQ
Trigger: CTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTC...ACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp TCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SEEHLLGTDTSGLTGAGQDHLYC*FPWGVQ
Trigger: CTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTC...CTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp GCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCAGCACAGAGTCAGGCGTaGAGCAACGTCACACACTCA +
Preference number: 4 (lower is better)
Translates to: AYRQALGMAPRQGINVDSAQSQA*SNVTHS
Trigger: TGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGC...TGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp CGACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCTGTCGGCCCCGGCCTaGACCTTCATCCCCAGGACG +
Preference number: 4 (lower is better)
Translates to: RQNDHPQAQIPPLFYSISLSAPA*TFIPRT
Trigger: CGTCCTGGGGATGAAGGTGCAGGCCGGGGCCGACAG...GGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000576670.1
CDS-3UTR CCA 90 bp GCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCAGCGTTGCTGACAGCCTaGCTAGAAGCGAGCGTGATT +
Preference number: 4 (lower is better)
Translates to: AYRQALGMAPRQGINVDSALLTA*LEASVI
Trigger: AATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGC...TGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp TCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGCGTTGCTGACAGCCTaGCTAGAAGCGAGCGTGATT +
Preference number: 4 (lower is better)
Translates to: SEEHLLGTDTSGLTGAGQALLTA*LEASVI
Trigger: AATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGC...CTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR CCA 90 bp GAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGAAGCGTTGCTGACAGCCTaGCTAGAAGCGAGCGTGATT +
Preference number: 4 (lower is better)
Translates to: EEHLLGTDTSGLTGAGQEALLTA*LEASVI
Trigger: AATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGC...TTCCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR CCA 90 bp TGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGTCGGCCAGAATGACTGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CFIPDKANFMSVRVGQNDCNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...GTCATTCTGGCCGACCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CCA 90 bp CCTGTAGCTCCAGCTTACACTGGTTATCAGCATAGCCCAGCAAAGCCCTTTGCTTGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PVAPAYTGYQHSPAKPFACNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...AGCAAAGGGCTTTGCTGGGCTATGCTGATAACCAGTGTAAGCTGGAGCTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp GGCGTTGCTGACAGCCTGGCTAGAAGCGAGCGTGATTCCCATAAAGTCATTGCCAATACAGGATCTGACTaGGGCAGACTGCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: GVADSLARSERDSHKVIANTGSD*GRLRFC
Trigger: GCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATT...GGCAATGACTTTATGGGAATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp ATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCATGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IVSQFCDKMIILRPKSHHGPPHP*RPVAPA
Trigger: AGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACC...ATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp AGAAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTCAGGGTCGGCCAGAATaGCCACCTGTACTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: RKKLAQSQACSNVTHSFLQGRPE*PPVLLL
Trigger: AAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTG...AAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp AGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGGCATTTATTGGGAACTaGCACGTCAGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: RSSHRVRRAATSHTHSFLAFIGN*HVRPHR
Trigger: CCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGC...CAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp TCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGCATTTATTGGGAACTaGCACGTCAGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: SEEHLLGTDTSGLTGAGQAFIGN*HVRPHR
Trigger: CCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGC...CTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR TCA 90 bp GTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCTGGTTCCTAAGTCTGGCAACTTaGGGAAAACAGAGGCAACGT +
Preference number: 4 (lower is better)
Translates to: VAFPGVSRLTRGVRIFWFLSLAT*GKQRQR
Trigger: ACGTTGCCTCTGTTTTCCTCAAGTTGCCAGACTTAG...GAACCAGAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000575528.5
CDS-3UTR GCA 90 bp GAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTCTTCCAAAAGCTGCTaGATGGTCCACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: EARTESGVQQRHTLIPFCSSKSC*MVHPTL
Trigger: AAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGA...ACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp AAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCGCACAGAGTCAGGCGTaGAGCAACGTCACACACTCA +
Preference number: 4 (lower is better)
Translates to: KEARTESGVQQRHTLIPFAQSQA*SNVTHS
Trigger: TGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGC...GAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp GAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCTGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: EVTLTIRNPNQSHVHAAVCNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...GACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp ACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACAAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TIRNPNQSHVHAAVLVWTRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...TGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp AAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KSEEHLLGTDTSGLTGAGRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...CCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
3UTR CAA 72 bp ATTCTTCCAAAAGCTGCTGCATGGTCCACCCCACCCTaGACGCCCTGTAGCTCCAGCTTACACTGGTTATCA +
Preference number: 4 (lower is better)
Translates to: ILPKAAAWSTPP*TPCSSSLHWLS
Trigger: TGATAACCAGTGTAAGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp CGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTTGCAAGCGGTTTCCCACTTTaGATACGAAGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RQALGMAPRQGINVDSLASGFPL*IRSAEL
Trigger: GAGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCT...TGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301328.9
ENST00000301329.10
CDS-3UTR TCA 90 bp GGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GASVSKTPSATSVSGHSSSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...GCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp TCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: SRGLGFKNTFCNFRQWPLSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...GAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp CGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTTCCTCAATACAGGATCTGACTaGGGCAGACTGCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: RTESGVQQRHTLIPFCFLNTGSD*GRLRFC
Trigger: GCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATT...GAGGAAACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp TTCCTGGCGTTGCTGACAGCCTGGCTAGAAGCGAGCGTGATTCCCATAAAGTCAAATACAGGATCTGACTaGGGCAGACTGCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: FLALLTAWLEASVIPIKSNTGSD*GRLRFC
Trigger: GCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATT...TGACTTTATGGGAATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGCCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp ACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACACAGGGTCGGCCAGAATaGCCACCTGTACTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: TIRNPNQSHVHAAVLVWTQGRPE*PPVLLL
Trigger: AAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTG...TGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp AAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGGTCGGCCAGAATaGCCACCTGTACTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: KSEEHLLGTDTSGLTGAGQGRPE*PPVLLL
Trigger: AAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTG...CCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp ATGTCCGTCAGGGTCGGCCAGAATGACCACCTGTACTGTTGCTTTCCCTGGGGTTTCAAAAACACCTTCTaGAACTTCCGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: MSVRVGQNDHLYCCFPWGFKNTF*NFRQWP
Trigger: TGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAA...ACCCCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp AAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGAATTCTTCCAAAAGCTGCTaGATGGTCCACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: KSIYWELTRQASQVLGRNSSKSC*MVHPTL
Trigger: AAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGA...ATTCCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp GAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGAAAATTCTTCCAAAAGCTaGTGCATGGTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: EEHLLGTDTSGLTGAGQENSSKS*CMVHPT
Trigger: GGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATT...TTCCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp CGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGAATTCTTCCAAAAGCTaGTGCATGGTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: RFQKHLLQLPSVATPASWNSSKS*CMVHPT
Trigger: GGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATT...CCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp TGTACTGTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCCACAGAGGCTTGCTCTaGATCATGTCTTCCGTTAAC +
Preference number: 4 (lower is better)
Translates to: CTVAFPGVSRLTRGVRIFHRGLL*IMSSVN
Trigger: GTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTG...GAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp GGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTCACAGAGGCTTGCTCTaGATCATGTCTTCCGTTAAC +
Preference number: 4 (lower is better)
Translates to: GPRFQKHLLQLPSVATPAHRGLL*IMSSVN
Trigger: GTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTG...AGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp CGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTTCCTCGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RTESGVQQRHTLIPFCFLGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...GAGGAAACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp GCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACCAAAGTCATGTTCATaGCGCTGTCCTAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: AYRQALGMAPRQGINVDSPKSCS*RCPSLD
Trigger: GTCCAGACTAGGACAGCGGCATGAACATGACTTTGG...TGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp ACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TNLHYPSLLACTGNKSEERPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...CTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR CCA 90 bp CAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGCAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QKSIYWELTRQASQVLGRQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...CCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR TCA 90 bp TCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTCAGGGTCGGCCAGAATaGCCACCTGTACTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SALPKPPCLYGKQIRRAFQGRPE*PPVLLL
Trigger: AAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTG...AAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR TCA 90 bp CAGGATCTGACTGAGGCAGACTGCGATTCTGCAAATAGAACTTATATCCTCCCGCAGGGTCGGCCAGAATaGCCACCTGTACTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: QDLTEADCDSANRTYILPQGRPE*PPVLLL
Trigger: AAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTG...CGGGAGGATATAAGTTCTATTTGCAGAATCGCAGTCTGCCTCAGTCAGATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR TCA 90 bp GTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCTGGTTCTGTCTTCCGTTAACCTaGAGCTTTGGGTTTATTGTG +
Preference number: 4 (lower is better)
Translates to: VAFPGVSRLTRGVRIFWFCLPLT*SFGFIV
Trigger: CACAATAAACCCAAAGCTTCAGGTTAACGGAAGACA...GAACCAGAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp AAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGCGTTGCTGTTCAAAAACACCTTCTaGAACTTCCGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KTPSATSVSGHSSFLALLFKNTF*NFRQWP
Trigger: TGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAA...CAGCAACGCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp AGAAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTAATTCTTCCAAAAGCTaGTGCATGGTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: RKKLAQSQACSNVTHSFLNSSKS*CMVHPT
Trigger: GGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATT...AAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp CGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGTCGGCCAGAAATTCTTCCAAAAGCTaGTGCATGGTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: RNASSPTKQISCPSGSARNSSKS*CMVHPT
Trigger: GGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATT...TCTGGCCGACCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp TCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGCACAGAGGCTTGCTCTaGATCATGTCTTCCGTTAAC +
Preference number: 4 (lower is better)
Translates to: SEEHLLGTDTSGLTGAGQHRGLL*IMSSVN
Trigger: GTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTG...CTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp AGAAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTCTACCCAAGCCTCCTTaGCTGTACGGGAAACAAATC +
Preference number: 4 (lower is better)
Translates to: RKKLAQSQACSNVTHSFLLPKPP*LYGKQI
Trigger: GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAG...AAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp GAAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTACCCAAGCCTCCTTaGCTGTACGGGAAACAAATC +
Preference number: 4 (lower is better)
Translates to: ERSSHRVRRAATSHTHSFLPKPP*LYGKQI
Trigger: GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAG...AAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp CCTGTAGCTCCAGCTTACACTGGTTATCAGCATAGCCCAGCAAAGCCCTTTGCTCTACCCAAGCCTCCTTaGCTGTACGGGAAACAAATC +
Preference number: 4 (lower is better)
Translates to: PVAPAYTGYQHSPAKPFALPKPP*LYGKQI
Trigger: GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAG...AGCAAAGGGCTTTGCTGGGCTATGCTGATAACCAGTGTAAGCTGGAGCTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574554.5
CDS-3UTR GCA 90 bp ACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTACCAAAGTCATGTTCATaGCGCTGTCCTAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: TIEERIVRRWEWHHDKALPKSCS*RCPSLD
Trigger: GTCCAGACTAGGACAGCGGCATGAACATGACTTTGG...TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp CGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGCACAGAGTCAGGCGTaGAGCAACGTCACACACTCA +
Preference number: 4 (lower is better)
Translates to: RETNQKSIYWELTRQASQAQSQA*SNVTHS
Trigger: TGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGC...CTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp GAAATACACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCTGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: EIHKSALPKPPCLYGKQICNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGTGTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR CCA 90 bp GCAAATAGAACTTATATCCTCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAATGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ANRTYILPGPRFQKHLLQCNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...TTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGAGGATATAAGTTCTATTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CCA 90 bp AACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTCCAAAAGCTGCTGCATaGTCCACCCCACCCTTGACG +
Preference number: 4 (lower is better)
Translates to: NKSEEHLLGTDTSGLTGAPKAAA*STPPLT
Trigger: CGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGG...AGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CCA 90 bp CACAGAGGCTTGCTCTGCATCATGTCTTCCGTTAACCTGAAGCTTTGGGTTTATCCAAAAGCTGCTGCATaGTCCACCCCACCCTTGACG +
Preference number: 4 (lower is better)
Translates to: HRGLLCIMSSVNLKLWVYPKAAA*STPPLT
Trigger: CGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGG...ATAAACCCAAAGCTTCAGGTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CCA 90 bp TTCTCCCTTTTCATCAAGTCTTCTAAGTCTGGCAACTCTTTCTGGGGGCAAGAGAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FSLFIKSSKSGNSFWGQERPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...CTCTTGCCCCCAGAAAGAGTTGCCAGACTTAGAAGACTTGATGAAAAGGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CCA 90 bp GGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GNKSEEHLLGTDTSGLTGRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...ACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CCA 90 bp TGCGATTCTGCAAATAGAACTTATATCCTCCCGGGGCCTCGGTTTCAAAAACACAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: CDSANRTYILPGPRFQKHRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...GTGTTTTTGAAACCGAGGCCCCGGGAGGATATAAGTTCTATTTGCAGAATCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CCA 90 bp AGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGCAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RSSHRVRRAATSHTHSFLQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...CAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp AATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCGCCGCTGTCCTAGTCTaGACAATCATCTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: NQKSIYWELTRQASQVLGAAVLV*TIICHS
Trigger: TGAGTGACAGATGATTGTCCAGACTAGGACAGCGGC...GCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp AAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTGCCGCTGTCCTAGTCTaGACAATCATCTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: KLAQSQACSNVTHSFLSVAAVLV*TIICHS
Trigger: TGAGTGACAGATGATTGTCCAGACTAGGACAGCGGC...AACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp CAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGGACAAGGCATTAATGTaGATTCACTTGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: QKSIYWELTRQASQVLGRDKALM*IHLHSC
Trigger: GCAGCTGTGCAAGTGAATCCACATTAATGCCTTGTC...CCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp CAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGCGTATCGTCAGGCGCTaGGAATGGCACCACGACAAG +
Preference number: 4 (lower is better)
Translates to: QASLPVRETNQKSIYWELRIVRR*EWHHDK
Trigger: CTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACG...CAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp TCTCTATGTGTTCTTTGGGAACCAGGATCCTCTGAGTCAATCCCTTCCAATCTCCGTATCGTCAGGCGCTaGGAATGGCACCACGACAAG +
Preference number: 4 (lower is better)
Translates to: SLCVLWEPGSSESIPSNLRIVRR*EWHHDK
Trigger: CTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACG...GAGATTGGAAGGGATTGACTCAGAGGATCCTGGTTCCCAAAGAACACATAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301329.10
CDS-3UTR TCA 90 bp GAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCAGCGGTTTCCCACTTTaGATACGAAGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: EVTLTIRNPNQSHVHAAVSGFPL*IRSAEL
Trigger: GAGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCT...GACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301328.9
ENST00000301329.10
CDS-3UTR TCA 90 bp CTGGCAACTCTTTCTGGGGGCAAGAGAAGGCAATTCTTCCAAAAGCTGCTGCATAGCGGTTTCCCACTTTaGATACGAAGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LATLSGGKRRQFFQKLLHSGFPL*IRSAEL
Trigger: GAGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCT...ATGCAGCAGCTTTTGGAAGAATTGCCTTCTCTTGCCCCCAGAAAGAGTTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp AGAACTTATATCCTCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGAGCGGTTTCCCACTTTaGATACGAAGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RTYILPGPRFQKHLLQLPSGFPL*IRSAEL
Trigger: GAGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCT...CGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGAGGATATAAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp TCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: SEEHLLGTDTSGLTGAGQSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...CTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR TCA 90 bp ACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTCAGGGTCGGCCAGAATaGCCACCTGTACTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: TVIYRMRSPSNSVDYSRRQGRPE*PPVLLL
Trigger: AAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTG...ACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp CGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGCATTTATTGGGAACTaGCACGTCAGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: RETNQKSIYWELTRQASQAFIGN*HVRPHR
Trigger: CCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGC...CTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR TCA 90 bp GACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAACTTCTCCAAGGCCTATaGTCCCCAACGGCAACTCGC +
Preference number: 4 (lower is better)
Translates to: DAIIVSQFCDKMIILRPKLLQGL*SPTATR
Trigger: GCGAGTTGCCGTTGGGGATCATAGGCCTTGGAGAAG...TTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000576670.1
CDS-3UTR GCA 90 bp GGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GNKSEEHLLGTDTSGLTGDHLYC*FPWGVQ
Trigger: CTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTC...ACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp CAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGCTCGTCACTTTTATCTaGTGCCATTGCATCATCCAA +
Preference number: 4 (lower is better)
Translates to: QKSIYWELTRQASQVLGRLVTFI*CHCIIQ
Trigger: TTGGATGATGCAATGGCAGCAGATAAAAGTGACGAG...CCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp AATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCCACAGAGGCTTGCTCTaGATCATGTCTTCCGTTAAC +
Preference number: 4 (lower is better)
Translates to: NQKSIYWELTRQASQVLGHRGLL*IMSSVN
Trigger: GTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTG...GCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp GCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTTGCACAGCTGCAGTTATATACAGAATaGGCAGTCCCAGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: ALGMAPRQGINVDSLAQLQLYTE*AVPATV
Trigger: CACTGTTGCTGGGACTGCGCATTCTGTATATAACTG...CAGCTGTGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp CGACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCCAAAAGCTGCTGCATaGTCCACCCCACCCTTGACG +
Preference number: 4 (lower is better)
Translates to: RQNDHPQAQIPPLFYSISPKAAA*STPPLT
Trigger: CGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGG...GGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CCA 90 bp TCACTCATCCAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGAAGGCCTCACAGGTGCTaGGCAGGAATCACAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLIQHSYIQNAQSQQQCRRPHRC*AGITEA
Trigger: AGCCTCTGTGATTCCTGCCCAGCACCTGTGAGGCCT...TCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp AATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCCAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: NQKSIYWELTRQASQVLGQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...GCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR TCA 90 bp GAAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: ERSSHRVRRAATSHTHSFSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...AAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp CAAAATTTCGATGCCCTACGCCCTGCCAGTAAGGGAGGAAAGCAGAGGTTACGAAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: QNFDALRPASKGGKQRLRSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...TCGTAACCTCTGCTTTCCTCCCTTACTGGCAGGGCGTAGGGCATCGAAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301329.10
CDS-3UTR TCA 90 bp GCGATTCTGCAAATAGAACTTATATCCTCCCGGGGCCTCGGTTTCAAAAACACCAATACAGGATCTGACTaGGGCAGACTGCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: AILQIELISSRGLGFKNTNTGSD*GRLRFC
Trigger: GCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATT...GGTGTTTTTGAAACCGAGGCCCCGGGAGGATATAAGTTCTATTTGCAGAATCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp TCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGTGTCTTCCGTTAACCTaGAGCTTTGGGTTTATTGTG +
Preference number: 4 (lower is better)
Translates to: SEEHLLGTDTSGLTGAGQCLPLT*SFGFIV
Trigger: CACAATAAACCCAAAGCTTCAGGTTAACGGAAGACA...CTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR TCA 90 bp ACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGAGCGGTTTCCCACTTTaGATACGAAGTGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TNQKSIYWELTRQASQVLSGFPL*IRSAGS
Trigger: AGAGCCTGCACTTCGTATTCAAAGTGGGAAACCGCT...CAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR TCA 90 bp CAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCTTCTCCAAGGCCTATaGTCCCCAACGGCAACTCGC +
Preference number: 4 (lower is better)
Translates to: QNDHPQAQIPPLFYSISHLLQGL*SPTATR
Trigger: GCGAGTTGCCGTTGGGGATCATAGGCCTTGGAGAAG...ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000576670.1
CDS-3UTR TCA 90 bp CACAGAGGCTTGCTCTGCATCATGTCTTCCGTTAACCTGAAGCTTTGGGTTTATTACGAGTGGCTTAAATaGAAGGACGTGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: HRGLLCIMSSVNLKLWVYYEWLK*KDVRGH
Trigger: GTGCCCACGCACGTCCTTTCATTTAAGCCACTCGTA...ATAAACCCAAAGCTTCAGGTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574554.5
CDS-3UTR GCA 90 bp CAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGTCTTCCAAAAGCTGCTaGATGGTCCACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: QASLPVRETNQKSIYWELSSKSC*MVHPTL
Trigger: AAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGA...CAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR GCA 90 bp CCAGCTTACACTGGTTATCAGCATAGCCCAGCAAAGCCCTTTGCTTTTCTTCATTCTTCCAAAAGCTGCTaGATGGTCCACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PAYTGYQHSPAKPFAFLHSSKSC*MVHPTL
Trigger: AAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGA...ATGAAGAAAAGCAAAGGGCTTTGCTGGGCTATGCTGATAACCAGTGTAAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp GTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGTCTTCCAAAAGCTGCTaGATGGTCCACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: VSDAIIVSQFCDKMIILRSSKSC*MVHPTL
Trigger: AAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGA...CCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp CCCTTTTCATCAAGTCTTCTAAGTCTGGCAACTCTTTCTGGGGGCAAGAGAAGGAATTCTTCCAAAAGCTaGTGCATGGTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: PFSSSLLSLATLSGGKRRNSSKS*CMVHPT
Trigger: GGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATT...CCTTCTCTTGCCCCCAGAAAGAGTTGCCAGACTTAGAAGACTTGATGAAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp CAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QHSYIQNAQSQQQCRLQQDHLYC*FPWGVQ
Trigger: CTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTC...CTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp ATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCATAAGGGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IILRPKSHHCFTPFPIIRDHLYC*FPWGVQ
Trigger: CTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTC...CCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp GAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTAGAAAGTTCTCGAAATaGTTCATCCCCGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: EARTESGVQQRHTLIPFCRKFSK*FIPDKA
Trigger: TGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCT...ACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp TCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCTTTATCTGCTGCCATTaGATCATCCAACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: SRGLGFKNTFCNFRQWPLFICCH*IIQQFA
Trigger: AGCAAATTGTTGGATGATGCAATGGCAGCAGATAAA...GAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp GGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGCCTCGTCACTTTTATCTaGTGCCATTGCATCATCCAA +
Preference number: 4 (lower is better)
Translates to: GFKNTFCNFRQWPLQLPGLVTFI*CHCIIQ
Trigger: TTGGATGATGCAATGGCAGCAGATAAAAGTGACGAG...GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp ACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTACAGTTATATACAGAATaGGCAGTCCCAGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: TIEERIVRRWEWHHDKALQLYTE*AVPATV
Trigger: CACTGTTGCTGGGACTGCGCATTCTGTATATAACTG...TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp TCTGGACAATCATCTGTCACTCATCCAACACAGTTATATACAGAATGCGCAGTCTGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGQSSVTHPTQLYTECAVCNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...GACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGACAGATGATTGTCCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp ATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACTGCAACTTCCGTCAGTaGCCACTCCAGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: IIVSQFCDKMIILRPKSHCNFRQ*PLQLPG
Trigger: GCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCA...GTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CCA 90 bp ACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACACAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TIRNPNQSHVHAAVLVWTQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...TGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp AATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCCAGGCGTTCTCTACCTaGACTCATGATTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: NQKSIYWELTRQASQVLGQAFST*THDWIS
Trigger: TGAAATCCAATCATGAGTCCAGGTAGAGAACGCCTG...GCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp CAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGTCAGGCGCTGGGAATaGCACCACGACAAGGCATTA +
Preference number: 4 (lower is better)
Translates to: QHSYIQNAQSQQQCRLQQVRRWE*HHDKAL
Trigger: TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGAC...CTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp TTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGTCAGGCGCTGGGAATaGCACCACGACAAGGCATTA +
Preference number: 4 (lower is better)
Translates to: LPVRETNQKSIYWELTRQVRRWE*HHDKAL
Trigger: TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGAC...CTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp TGCGATTCTGCAAATAGAACTTATATCCTCCCGGGGCCTCGGTTTCAAAAACACAGCGGTTTCCCACTTTaGATACGAAGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: CDSANRTYILPGPRFQKHSGFPL*IRSAEL
Trigger: GAGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCT...GTGTTTTTGAAACCGAGGCCCCGGGAGGATATAAGTTCTATTTGCAGAATCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp ACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTAATACAGGATCTGACTaGGGCAGACTGCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: TVIYRMRSPSNSVDYSRRNTGSD*GRLRFC
Trigger: GCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATT...ACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp AAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTTGTCTTCCGTTAACCTaGAGCTTTGGGTTTATTGTG +
Preference number: 4 (lower is better)
Translates to: KLAQSQACSNVTHSFLSVCLPLT*SFGFIV
Trigger: CACAATAAACCCAAAGCTTCAGGTTAACGGAAGACA...AACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp ATCTGCTGCCATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAGCATTTATTGGGAACTaGCACGTCAGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: ICCHCIIQQFASLWIHLRAFIGN*HVRPHR
Trigger: CCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGC...TCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGCAGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575528.5
CDS-3UTR TCA 90 bp GTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGCGCCCATCATAAGGCTTTaGGAAACTGTCTTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: VSKTPSATSVSGHSSFLAPIIRL*ETVFCY
Trigger: ATAACAGAAGACAGTTTCTCAAAGCCTTATGATGGG...CGCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
CDS-3UTR TCA 90 bp TCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTACGAGTGGCTTAAATaGAAGGACGTGCGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SVLRQNDHPQAQIPPLFYYEWLK*KDVRGH
Trigger: GTGCCCACGCACGTCCTTTCATTTAAGCCACTCGTA...GTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000576670.1
CDS-3UTR GCA 90 bp AACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTACTTTGAATACGAAGTaGAGAGCTCTGCGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: NKSEEHLLGTDTSGLTGATLNTK*RALRAA
Trigger: GGCTGCTCGCAGAGCTCTGCACTTCGTATTCAAAGT...AGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000574554.5
CDS-3UTR GCA 90 bp AATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATTTCAAAAACACCTTCTaGAACTTCCGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NRRAYRQALGMAPRQGINFKNTF*NFRQWP
Trigger: TGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAA...ATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp ATTGCCAAGCTTGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAATCTTCCAAAAGCTGCTaGATGGTCCACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: IAKLVVSDAIIVSQFCDKSSKSC*MVHPTL
Trigger: AAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGA...TTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACAAGCTTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp GAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGAATTCTTCCAAAAGCTaGTGCATGGTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: ETNQKSIYWELTRQASQVNSSKS*CMVHPT
Trigger: GGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATT...CACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp TGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGTCGGCCAGAATGACCATCATCCAACAATTTaGTTCCCTCTGGATCCATCT +
Preference number: 4 (lower is better)
Translates to: CFIPDKANFMSVRVGQNDHHPTI*FPLDPS
Trigger: AGATGGATCCAGAGGGAAGCAAATTGTTGGATGATG...GTCATTCTGGCCGACCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp AGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTTCTCTACCTGGACTCGTCACTTTTATCTaGTGCCATTGCATCATCCAA +
Preference number: 4 (lower is better)
Translates to: RMRSPSNSVDYSRRSLPGLVTFI*CHCIIQ
Trigger: TTGGATGATGCAATGGCAGCAGATAAAAGTGACGAG...TCCAGGTAGAGAACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp ACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCACAGAGGCTTGCTCTaGATCATGTCTTCCGTTAAC +
Preference number: 4 (lower is better)
Translates to: TNLHYPSLLACTGNKSEEHRGLL*IMSSVN
Trigger: GTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTG...CTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR GCA 90 bp CGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGCACAGAGGCTTGCTCTaGATCATGTCTTCCGTTAAC +
Preference number: 4 (lower is better)
Translates to: RETNQKSIYWELTRQASQHRGLL*IMSSVN
Trigger: GTTAACGGAAGACATGATGCAGAGCAAGCCTCTGTG...CTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp CGATTCAGAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATGCGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: RFRGNPNYPQSQPKSCSCGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...GCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTCTGAATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp TGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: CTGNKSEEHLLGTDTSGLGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...GAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp GGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GNKSEEHLLGTDTSGLTGGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...ACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp GAAATACACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCACTTTGAATACGAAGTaGAGGCTCTGCGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EIHKSALPKPPCLYGKQITLNTK*RLCEQP
Trigger: TGGCTGCTCGCAGAGCCTGCACTTCGTATTCAAAGT...GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGTGTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR GCA 90 bp ATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCATATTAAATGAAAGGACGTaGGTGGGCACACCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: MIILRPKSHHCFTPFPIILNERT*VGTPRG
Trigger: TCCCCGCGGTGTGCCCACGCACGTCCTTTCATTTAA...TATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000576670.1
CDS-3UTR CCA 90 bp CAAGCTTGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATGCGTTGCTGACAGCCTaGCTAGAAGCGAGCGTGATT +
Preference number: 4 (lower is better)
Translates to: QACSLRRHNCKSVLRQNDALLTA*LEASVI
Trigger: AATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGC...ATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CCA 90 bp CTTAGAAAGTTCTCGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCGCGTTGCTGACAGCCTaGCTAGAAGCGAGCGTGATT +
Preference number: 4 (lower is better)
Translates to: LRKFSKCFIPDKANFMSVALLTA*LEASVI
Trigger: AATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGC...GACGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CCA 90 bp CAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAAATGCTTCATCCCAAAAGCTGCTGCATaGTCCACCCCACCCTTGACG +
Preference number: 4 (lower is better)
Translates to: QQFASLWIHLRKFSKCFIPKAAA*STPPLT
Trigger: CGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGG...GATGAAGCATTTCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CCA 90 bp GCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACAATTTGCTTCCCTCTaGATCCATCTTAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: AYRQALGMAPRQGINVDSQFASL*IHLRKF
Trigger: GAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTG...TGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp AAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGCGTTCTCTACCTaGACTCATGATTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: KSEEHLLGTDTSGLTGAGQAFST*THDWIS
Trigger: TGAAATCCAATCATGAGTCCAGGTAGAGAACGCCTG...CCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp CGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACAATCATCCAGGCGTTCTCTACCTaGACTCATGATTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: RNPNQSHVHAAVLVWTIIQAFST*THDWIS
Trigger: TGAAATCCAATCATGAGTCCAGGTAGAGAACGCCTG...GATGATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp CGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCAGCGGTTTCCCACTTTaGATACGAAGTGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RHNCKSVLRQNDHPQAQISGFPL*IRSAEL
Trigger: GAGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCT...GATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp TCACTCATCCAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGAAATACAGGATCTGACTaGGGCAGACTGCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: SLIQHSYIQNAQSQQQCRNTGSD*GRLRFC
Trigger: GCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATT...TCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp GCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCAATACAGGATCTGACTaGGGCAGACTGCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: AIIVSQFCDKMIILRPKSNTGSD*GRLRFC
Trigger: GCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATT...GGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp ATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGACAGGGTCGGCCAGAATaGCCACCTGTACTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: IASSNNLLPSGSILESSRQGRPE*PPVLLL
Trigger: AAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTG...TCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR TCA 90 bp ATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACAATCTGTCTTCCGTTAACCTaGAGCTTTGGGTTTATTGTG +
Preference number: 4 (lower is better)
Translates to: IRNPNQSHVHAAVLVWTICLPLT*SFGFIV
Trigger: CACAATAAACCCAAAGCTTCAGGTTAACGGAAGACA...GATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp TCTGGACAATCATCTGTCACTCATCCAACACAGTTATATACAGAATGCGCAGTCGCATTTATTGGGAACTaGCACGTCAGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: SGQSSVTHPTQLYTECAVAFIGN*HVRPHR
Trigger: CCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGC...GACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGACAGATGATTGTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp AGAAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTCCCATCATAAGGCTTTaGGAAACTGTCTTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: RKKLAQSQACSNVTHSFLPIIRL*ETVFCY
Trigger: ATAACAGAAGACAGTTTCTCAAAGCCTTATGATGGG...AAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301328.9
CDS-3UTR TCA 90 bp GCCATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTAAAACAGAGGCAACGTaGGCCAGGGGTCACACACTA +
Preference number: 4 (lower is better)
Translates to: AIASSNNLLPSGSILESSKTEAT*ARGHTL
Trigger: TAGTGTGTGACCCCTGGCTCACGTTGCCTCTGTTTT...AGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575528.5
CDS-3UTR GCA 90 bp CAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGACTTTGAATACGAAGTaGAGAGCTCTGCGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QHSYIQNAQSQQQCRLQQTLNTK*RALRAA
Trigger: GGCTGCTCGCAGAGCTCTGCACTTCGTATTCAAAGT...CTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301328.9
ENST00000301329.10
CDS-3UTR GCA 90 bp TTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCAACTTTGAATACGAAGTaGAGAGCTCTGCGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FCDKMIILRPKSHHCFTPTLNTK*RALRAA
Trigger: GGCTGCTCGCAGAGCTCTGCACTTCGTATTCAAAGT...TGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp TCCCATAAAGTCATTGCCAAGCTTGTAGTCTCCGACGCCATAATTGTAAGTCAGACTTTGAATACGAAGTaGAGAGCTCTGCGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHKVIAKLVVSDAIIVSQTLNTK*RALRAA
Trigger: GGCTGCTCGCAGAGCTCTGCACTTCGTATTCAAAGT...CTGACTTACAATTATGGCGTCGGAGACTACAAGCTTGGCAATGACTTTATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp AACGTCAAAACCTGCCAGAATAAGACAATAGAAGAGCGTATCGTCAGGCGCTGGTTCAAAAACACCTTCTaGAACTTCCGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NVKTCQNKTIEERIVRRWFKNTF*NFRQWP
Trigger: TGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAA...CCAGCGCCTGACGATACGCTCTTCTATTGTCTTATTCTGGCAGGTTTTGACGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp ACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGTTCAAAAACACCTTCTaGAACTTCCGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TNQKSIYWELTRQASQVLFKNTF*NFRQWP
Trigger: TGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAA...CAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR GCA 90 bp CTGAAGCTTTGGGTTTATTGTGTTTGGCAAACCACTCGTCACTTTTATCTGCTGTCTTCCAAAAGCTGCTaGATGGTCCACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: LKLWVYCVWQTTRHFYLLSSKSC*MVHPTL
Trigger: AAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGA...CAGCAGATAAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp TGGATCCATCTTAGAAAGTTCTCGAAATGCTTCATCCCCGACAAAGCAAATTTCGACCACCTGTACTGTTaGTTTCCCTGGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WIHLRKFSKCFIPDKANFDHLYC*FPWGVQ
Trigger: CTGGACACCCCAGGGAAAGCAACAGTACAGGTGGTC...GAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAGATGGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp GAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCATCATCCAACAATTTaGTTCCCTCTGGATCCATCT +
Preference number: 4 (lower is better)
Translates to: EVTLTIRNPNQSHVHAAVHHPTI*FPLDPS
Trigger: AGATGGATCCAGAGGGAAGCAAATTGTTGGATGATG...GACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp ACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACACATCATCCAACAATTTaGTTCCCTCTGGATCCATCT +
Preference number: 4 (lower is better)
Translates to: TIRNPNQSHVHAAVLVWTHHPTI*FPLDPS
Trigger: AGATGGATCCAGAGGGAAGCAAATTGTTGGATGATG...TGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp AAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCATCATCCAACAATTTaGTTCCCTCTGGATCCATCT +
Preference number: 4 (lower is better)
Translates to: KSEEHLLGTDTSGLTGAGHHPTI*FPLDPS
Trigger: AGATGGATCCAGAGGGAAGCAAATTGTTGGATGATG...CCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp GAACTTATATCCTCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCATCATCCAACAATTTaGTTCCCTCTGGATCCATCT +
Preference number: 4 (lower is better)
Translates to: ELISSRGLGFKNTFCNFRHHPTI*FPLDPS
Trigger: AGATGGATCCAGAGGGAAGCAAATTGTTGGATGATG...ACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGAGGATATAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp GAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGAATTTATCTGCTGCCATTaGATCATCCAACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: EEHLLGTDTSGLTGAGQEFICCH*IIQQFA
Trigger: AGCAAATTGTTGGATGATGCAATGGCAGCAGATAAA...TTCCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp TCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGTTTATCTGCTGCCATTaGATCATCCAACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: SEEHLLGTDTSGLTGAGQFICCH*IIQQFA
Trigger: AGCAAATTGTTGGATGATGCAATGGCAGCAGATAAA...CTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp AGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTTCTCTACCTGGAGTCACTTTTATCTGCTaGCATTGCATCATCCAACAA +
Preference number: 4 (lower is better)
Translates to: RMRSPSNSVDYSRRSLPGVTFIC*HCIIQQ
Trigger: TTGTTGGATGATGCAATGGCAGCAGATAAAAGTGAC...TCCAGGTAGAGAACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp AAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGAATGTCACTTTTATCTGCTaGCATTGCATCATCCAACAA +
Preference number: 4 (lower is better)
Translates to: KSIYWELTRQASQVLGRNVTFIC*HCIIQQ
Trigger: TTGTTGGATGATGCAATGGCAGCAGATAAAAGTGAC...ATTCCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp AATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCGTCACTTTTATCTGCTaGCATTGCATCATCCAACAA +
Preference number: 4 (lower is better)
Translates to: NQKSIYWELTRQASQVLGVTFIC*HCIIQQ
Trigger: TTGTTGGATGATGCAATGGCAGCAGATAAAAGTGAC...GCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp CAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: QFCDKMIILRPKSHHCFTGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...AGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp TTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCAGGAATCACAGAGGCTTaGTCTGCATCATGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: FCDKMIILRPKSHHCFTPGITEA*SASCLP
Trigger: CGGAAGACATGATGCAGAGCAAGCCTCTGTGATTCC...TGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp TTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGCCAAAGTCATGTTCATaGCGCTGTCCTAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LPVRETNQKSIYWELTRQPKSCS*RCPSLD
Trigger: GTCCAGACTAGGACAGCGGCATGAACATGACTTTGG...CTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp ATCTTAGAAAGTTCTCGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTTAAATGAAAGGACGTaGGTGGGCACACCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: ILESSRNASSPTKQISCPLNERT*VGTPRG
Trigger: TCCCCGCGGTGTGCCCACGCACGTCCTTTCATTTAA...CGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574554.5
CDS-3UTR CCA 90 bp TCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTGAGGATATCAAGGATTaGTCCGACCTCGTAACGCCA +
Preference number: 4 (lower is better)
Translates to: SLPVRETNQKSIYWELTREDIKD*SDLVTP
Trigger: TGGCGTTACGAGGTCGGACCAATCCTTGATATCCTC...ACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR TCA 90 bp CGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: RRHNCKSVLRQNDHPQAQSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...TTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
ENST00000576670.1
CDS-3UTR TCA 90 bp ATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAGCATTTATTGGGAACTaGCACGTCAGGCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: IASSNNLLPSGSILESSRAFIGN*HVRPHR
Trigger: CCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGC...TCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575528.5
CDS-3UTR TCA 90 bp AGAAAGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTCTCTACCTGGACTCATaGTTGGATTTCATTTCTAAA +
Preference number: 4 (lower is better)
Translates to: RKKLAQSQACSNVTHSFLLYLDS*LDFISK
Trigger: TTTAGAAATGAAATCCAATCATGAGTCCAGGTAGAG...AAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp AAGCTTGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCACTTTGAATACGAAGTaGAGAGCTCTGCGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KLVVSDAIIVSQFCDKMITLNTK*RALRAA
Trigger: GGCTGCTCGCAGAGCTCTGCACTTCGTATTCAAAGT...GATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp AGTCATTGCCAAGCTTGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGATTCAAAAACACCTTCTaGAACTTCCGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHCQACSLRRHNCKSVLRFKNTF*NFRQWP
Trigger: TGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAA...TCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACAAGCTTGGCAATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp CGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAATTCAAAAACACCTTCTaGAACTTCCGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RRHNCKSVLRQNDHPQAQFKNTF*NFRQWP
Trigger: TGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAA...TTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR GCA 90 bp ATCTTAGAAAGTTCTCGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCTTCCAAAAGCTGCTaGATGGTCCACCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: ILESSRNASSPTKQISCPSSKSC*MVHPTL
Trigger: AAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGA...CGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp ATTTCCCATCATAAGGCTTTGAGAAACTGTCTTCTGTTATCCGGGTGTAGTCAGAATTCTTCCAAAAGCTaGTGCATGGTCCACCCCACC +
Preference number: 4 (lower is better)
Translates to: ISHHKALRNCLLLSGCSQNSSKS*CMVHPT
Trigger: GGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAATT...CTGACTACACCCGGATAACAGAAGACAGTTTCTCAAAGCCTTATGATGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574554.5
CDS-3UTR GCA 90 bp CGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGCTCGTCACTTTTATCTaGTGCCATTGCATCATCCAA +
Preference number: 4 (lower is better)
Translates to: RETNQKSIYWELTRQASQLVTFI*CHCIIQ
Trigger: TTGGATGATGCAATGGCAGCAGATAAAAGTGACGAG...CTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp TGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCCAGTTATATACAGAATaGGCAGTCCCAGCAACAGTG +
Preference number: 4 (lower is better)
Translates to: CTGNKSEEHLLGTDTSGLQLYTE*AVPATV
Trigger: CACTGTTGCTGGGACTGCGCATTCTGTATATAACTG...GAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp CGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCTCTTCAAATTCCTCATaGCGCAGAACAGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: RHNCKSVLRQNDHPQAQISSNSS*RRTVSR
Trigger: TCGGCTCACTGTTCTGCGGCATGAGGAATTTGAAGA...GATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574581.5
CDS-3UTR CCA 90 bp TTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGCAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LPVRETNQKSIYWELTRQQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...CTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CCA 90 bp ATTGCCAAGCTTGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAACAGAAGAGCATTTATTaGGAACTGACACGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: IAKLVVSDAIIVSQFCDKQKSIY*ELTRQA
Trigger: GGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG...TTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACAAGCTTGGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574554.5
CDS-3UTR CCA 90 bp TCTGGACAATCATCTGTCACTCATCCAACACAGTTATATACAGAATGCGCAGTCGCCGCTGTCCTAGTCTaGACAATCATCTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: SGQSSVTHPTQLYTECAVAAVLV*TIICHS
Trigger: TGAGTGACAGATGATTGTCCAGACTAGGACAGCGGC...GACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGACAGATGATTGTCCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp CACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGACAAGGCATTAATGTaGATTCACTTGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: HYPSLLACTGNKSEEHLLDKALM*IHLHSC
Trigger: GCAGCTGTGCAAGTGAATCCACATTAATGCCTTGTC...CAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CCA 90 bp GAAATACACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCGACAAGGCATTAATGTaGATTCACTTGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: EIHKSALPKPPCLYGKQIDKALM*IHLHSC
Trigger: GCAGCTGTGCAAGTGAATCCACATTAATGCCTTGTC...GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGTGTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp GCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: AIIVSQFCDKMIILRPKSSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...GGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
ENST00000576670.1
CDS-3UTR TCA 90 bp ATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCATAAGGCTTAGTTCTGCGACAAAATaGTCATCCTCAGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: ILRPKSHHCFTPFPIIRLSSATK*SSSGPN
Trigger: ATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACT...AAGCCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
CDS-3UTR TCA 90 bp GGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTTGTCTTCCGTTAACCTaGAGCTTTGGGTTTATTGTG +
Preference number: 4 (lower is better)
Translates to: GNKSEEHLLGTDTSGLTGCLPLT*SFGFIV
Trigger: CACAATAAACCCAAAGCTTCAGGTTAACGGAAGACA...ACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp GAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGAGAAAGTTCTCGAAATaGTTCATCCCCGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: ETNQKSIYWELTRQASQVRKFSK*FIPDKA
Trigger: TGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCT...CACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp AACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTCTCGTCACTTTTATCTaGTGCCATTGCATCATCCAA +
Preference number: 4 (lower is better)
Translates to: NKSEEHLLGTDTSGLTGALVTFI*CHCIIQ
Trigger: TTGGATGATGCAATGGCAGCAGATAAAAGTGACGAG...AGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp GCTGCCATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTTCAAATTCCTCATaGCGCAGAACCGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AAIASSNNLLPSGSILESSSNSS*RRTVFS
Trigger: GGAAAAGACGGTTCTGCGGCATGAGGAATTTGAAGA...ACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574554.5
CDS-3UTR GCA 90 bp GCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCTCTTCAAATTCCTCATaGCGCAGAACCGTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: AIIVSQFCDKMIILRPKSSSNSS*RRTVFS
Trigger: GGAAAAGACGGTTCTGCGGCATGAGGAATTTGAAGA...GGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000576670.1
CDS-3UTR TCA 90 bp ACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCTCTACCTGGACTCATaGTTGGATTTCATTTCTAAA +
Preference number: 4 (lower is better)
Translates to: TNLHYPSLLACTGNKSEELYLDS*LDFISK
Trigger: TTTAGAAATGAAATCCAATCATGAGTCCAGGTAGAG...CTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp GCCATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTTTCAAAAACACCTTCTaGAACTTCCGTCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AIASSNNLLPSGSILESSFKNTF*NFRQWP
Trigger: TGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAA...AGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp TCACTCATCCAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGAAGAAAGTTCTCGAAATaGTTCATCCCCGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: SLIQHSYIQNAQSQQQCRRKFSK*FIPDKA
Trigger: TGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCT...TCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp TTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGAGAAAGTTCTCGAAATaGTTCATCCCCGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: LPVRETNQKSIYWELTRQRKFSK*FIPDKA
Trigger: TGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCT...CTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp TCTTCCGTTAACCTGAAGCTTTGGGTTTATTGTGTTTGGCAAACCACTCGTCACAGAAAGTTCTCGAAATaGTTCATCCCCGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSVNLKLWVYCVWQTTRHRKFSK*FIPDKA
Trigger: TGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCT...GTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAGGTTAACGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp ACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGTTTATCTGCTGCCATTaGATCATCCAACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: TNQKSIYWELTRQASQVLFICCH*IIQQFA
Trigger: AGCAAATTGTTGGATGATGCAATGGCAGCAGATAAA...CAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp AACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGTCACTTTTATCTGCTaGCATTGCATCATCCAACAA +
Preference number: 4 (lower is better)
Translates to: NKSEEHLLGTDTSGLTGAVTFIC*HCIIQQ
Trigger: TTGTTGGATGATGCAATGGCAGCAGATAAAAGTGAC...AGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR GCA 90 bp CCAGCTTACACTGGTTATCAGCATAGCCCAGCAAAGCCCTTTGCTTTTCTTCATGTCACTTTTATCTGCTaGCATTGCATCATCCAACAA +
Preference number: 4 (lower is better)
Translates to: PAYTGYQHSPAKPFAFLHVTFIC*HCIIQQ
Trigger: TTGTTGGATGATGCAATGGCAGCAGATAAAAGTGAC...ATGAAGAAAAGCAAAGGGCTTTGCTGGGCTATGCTGATAACCAGTGTAAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp GAAAGTTCTCGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGGTCACTTTTATCTGCTaGCATTGCATCATCCAACAA +
Preference number: 4 (lower is better)
Translates to: ESSRNASSPTKQISCPSGVTFIC*HCIIQQ
Trigger: TTGTTGGATGATGCAATGGCAGCAGATAAAAGTGAC...CCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR GCA 90 bp ATCTGCTGCCATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGACTCGTCACTTTTATCTaGTGCCATTGCATCATCCAA +
Preference number: 4 (lower is better)
Translates to: ICCHCIIQQFASLWIHLRLVTFI*CHCIIQ
Trigger: TTGGATGATGCAATGGCAGCAGATAAAAGTGACGAG...TCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGCAGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CCA 90 bp CACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGCAATTTGCTTCCCTCTaGATCCATCTTAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: HYPSLLACTGNKSEEHLLQFASL*IHLRKF
Trigger: GAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTG...CAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR CCA 90 bp GAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCAATTTGCTTCCCTCTaGATCCATCTTAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: ETNQKSIYWELTRQASQVQFASL*IHLRKF
Trigger: GAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTG...CACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
3UTR CAA 72 bp CGACAAAATGATCATCCTCAGGCCCAAATCCCACCATaGTTTTACTCCATTTCCCATCATAAGGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: RQNDHPQAQIPP*FYSISHHKALR
Trigger: TCTCAAAGCCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
CDS-3UTR TCA 90 bp CAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATTGTCTTCCGTTAACCTaGAGCTTTGGGTTTATTGTG +
Preference number: 4 (lower is better)
Translates to: QNDHPQAQIPPLFYSISHCLPLT*SFGFIV
Trigger: CACAATAAACCCAAAGCTTCAGGTTAACGGAAGACA...ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR TCA 90 bp GAAATACACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCCTCTACCTGGACTCATaGTTGGATTTCATTTCTAAA +
Preference number: 4 (lower is better)
Translates to: EIHKSALPKPPCLYGKQILYLDS*LDFISK
Trigger: TTTAGAAATGAAATCCAATCATGAGTCCAGGTAGAG...GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGTGTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR TCA 90 bp ATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCATAAGGCTTCCCATCATAAGGCTTTaGGAAACTGTCTTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: ILRPKSHHCFTPFPIIRLPIIRL*ETVFCY
Trigger: ATAACAGAAGACAGTTTCTCAAAGCCTTATGATGGG...AAGCCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
CDS-3UTR TCA 90 bp AATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCACCCATCATAAGGCTTTaGGAAACTGTCTTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: NCKSVLRQNDHPQAQIPPPIIRL*ETVFCY
Trigger: ATAACAGAAGACAGTTTCTCAAAGCCTTATGATGGG...TGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
CDS-3UTR GCA 90 bp CAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAAATGCTTCATCCCCGTCACTTTTATCTGCTaGCATTGCATCATCCAACAA +
Preference number: 4 (lower is better)
Translates to: QFASLWIHLRKFSKCFIPVTFIC*HCIIQQ
Trigger: TTGTTGGATGATGCAATGGCAGCAGATAAAAGTGAC...GGGGATGAAGCATTTCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CCA 90 bp TTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGCAATTTGCTTCCCTCTaGATCCATCTTAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LPVRETNQKSIYWELTRQQFASL*IHLRKF
Trigger: GAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTG...CTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CCA 90 bp ATCTGCTGCCATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGACAATTTGCTTCCCTCTaGATCCATCTTAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: ICCHCIIQQFASLWIHLRQFASL*IHLRKF
Trigger: GAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTG...TCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGCAGCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
3UTR CAA 72 bp TCACTTTTATCTGCTGCCATTGCATCATCCAACAATTaGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SLLSAAIASSNN*LPSGSILESSR
Trigger: TCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGCAGCAGATAAAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR TCA 90 bp AAATTTTCATTCCCAGTAGATTACACCAGTAGTTCAAGGACTTTTGAAGATCAGAATACAGGATCTGACTaGGGCAGACTGCGATTCTGC +
Preference number: 4 (lower is better)
Translates to: KFSFPVDYTSSSRTFEDQNTGSD*GRLRFC
Trigger: GCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATT...CTGATCTTCAAAAGTCCTTGAACTACTGGTGTAATCTACTGGGAATGAAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR TCA 90 bp ATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCCCATCATAAGGCTTTaGGAAACTGTCTTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: IIVSQFCDKMIILRPKSHPIIRL*ETVFCY
Trigger: ATAACAGAAGACAGTTTCTCAAAGCCTTATGATGGG...GTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
CDS-3UTR GCA 90 bp GCTCTCATAAAAGCTACACGATTCAGAGGTAACCCTAACTATCCGCAATCCCAATTTATCTGCTGCCATTaGATCATCCAACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: ALIKATRFRGNPNYPQSQFICCH*IIQQFA
Trigger: AGCAAATTGTTGGATGATGCAATGGCAGCAGATAAA...TTGGGATTGCGGATAGTTAGGGTTACCTCTGAATCGTGTAGCTTTTATGAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR GCA 90 bp ATCTTAGAAAGTTCTCGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGCTCGTCACTTTTATCTaGTGCCATTGCATCATCCAA +
Preference number: 4 (lower is better)
Translates to: ILESSRNASSPTKQISCPLVTFI*CHCIIQ
Trigger: TTGGATGATGCAATGGCAGCAGATAAAAGTGACGAG...CGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CCA 90 bp GCCATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCAATTTGCTTCCCTCTaGATCCATCTTAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: AIASSNNLLPSGSILESSQFASL*IHLRKF
Trigger: GAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTG...AGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR TCA 90 bp AGCAGAGGTTACGATTTACAAGTAATTCTCTATGTGTTCTTTGGGAACCAGGATTGTCTTCCGTTAACCTaGAGCTTTGGGTTTATTGTG +
Preference number: 4 (lower is better)
Translates to: SRGYDLQVILYVFFGNQDCLPLT*SFGFIV
Trigger: CACAATAAACCCAAAGCTTCAGGTTAACGGAAGACA...ATCCTGGTTCCCAAAGAACACATAGAGAATTACTTGTAAATCGTAACCTCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301329.10
CDS-3UTR GCA 90 bp AGCAGAGGTTACGATTTACAAGTAATTCTCTATGTGTTCTTTGGGAACCAGGATCATCATCCAACAATTTaGTTCCCTCTGGATCCATCT +
Preference number: 4 (lower is better)
Translates to: SRGYDLQVILYVFFGNQDHHPTI*FPLDPS
Trigger: AGATGGATCCAGAGGGAAGCAAATTGTTGGATGATG...ATCCTGGTTCCCAAAGAACACATAGAGAATTACTTGTAAATCGTAACCTCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301329.10
CDS-3UTR GCA 90 bp CTGAAGCTTTGGGTTTATTGTGTTTGGCAAACCACTCGTCACTTTTATCTGCTGTTTATCTGCTGCCATTaGATCATCCAACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: LKLWVYCVWQTTRHFYLLFICCH*IIQQFA
Trigger: AGCAAATTGTTGGATGATGCAATGGCAGCAGATAAA...CAGCAGATAAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CCA 90 bp GAGTTACTTTTAATACAGGATCTGACTGAGGCAGACTGCGATTCTGCAAATAGACAATTTGCTTCCCTCTaGATCCATCTTAGAAAGTTC +
Preference number: 4 (lower is better)
Translates to: ELLLIQDLTEADCDSANRQFASL*IHLRKF
Trigger: GAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTG...TCTATTTGCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATTAAAAGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp CTAGAGTTACTTTTAATACAGGATCTGACTGAGGCAGACTGCGATTCTGCAAATTTTATCTGCTGCCATTaGATCATCCAACAATTTGCT +
Preference number: 4 (lower is better)
Translates to: LELLLIQDLTEADCDSANFICCH*IIQQFA
Trigger: AGCAAATTGTTGGATGATGCAATGGCAGCAGATAAA...ATTTGCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATTAAAAGTAACTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR GCA 90 bp AAATTTTCATTCCCAGTAGATTACACCAGTAGTTCAAGGACTTTTGAAGATCAGAGAAAGTTCTCGAAATaGTTCATCCCCGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: KFSFPVDYTSSSRTFEDQRKFSK*FIPDKA
Trigger: TGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCT...CTGATCTTCAAAAGTCCTTGAACTACTGGTGTAATCTACTGGGAATGAAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS TCA 90 bp CGGTTTCCCACTTTGAATACGAAGTGCAGGCTCTGCGAGCAGCCATaGTTCCCGCCGCACGCAGCCGTCACGCGCACCGTACAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: RFPTLNTKCRLCEQP*FPPHAAVTRTVQPS
Trigger: ACTGGGCTGTACGGTGCGCGTGACGGCTGCGTGCGGCGGGAATCATGGCTGCTCGCAGAGCCTGCACTTCGTATTCAAAGTGGGAAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS TCA 90 bp GGACGTCCCGATAGAAACGCGCCGTCTGGAAGCGGTTTCCCACTTTaGATACGAAGTGCAGGCTCTGCGAGCAGCCATGATTCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GRPDRNAPSGSGFPL*IRSAGSASSHDSRR
Trigger: GCGGCGGGAATCATGGCTGCTCGCAGAGCCTGCACTTCGTATTCAAAGTGGGAAACCGCTTCCAGACGGCGCGTTTCTATCGGGACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR CAA 90 bp TATCCTCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCTGGTCCACCCCACCCTaGACGCCCTGTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: YPPGASVSKTPSATSVSGWSTPP*TPCSSS
Trigger: GCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCA...GCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGAGGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CAA 90 bp GAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGAATGGTCCACCCCACCCTaGACGCCCTGTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: EEHLLGTDTSGLTGAGQEWSTPP*TPCSSS
Trigger: GCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCA...TTCCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp CGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACAATCATCGCAGGTGGTCCAGGCTaGGGACCTTGCGCGAGGCGC +
Preference number: 5 (lower is better)
Translates to: RNPNQSHVHAAVLVWTIIAGGPG*GPCARR
Trigger: GCGCCTCGCGCAAGGTCCCAAGCCTGGACCACCTGC...GATGATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR CAA 90 bp TGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGTCGGCCAGAATGACTGGTCCACCCCACCCTaGACGCCCTGTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CFIPDKANFMSVRVGQNDWSTPP*TPCSSS
Trigger: GCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCA...GTCATTCTGGCCGACCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp GAACTTATATCCTCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTTGGTCCACCCCACCCTaGACGCCCTGTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ELISSRGLGFKNTFCNFRWSTPP*TPCSSS
Trigger: GCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCA...ACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGAGGATATAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CAA 90 bp TCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTTCCAGGCTTGGGACCTaGCGCGAGGCGCTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: SLPVRETNQKSIYWELTRSRLGT*REALGP
Trigger: CGGACCCAGCGCCTCGCGCAAGGTCCCAAGCCTGGA...ACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS-3UTR CAA 90 bp TCCGTCAGGGTCGGCCAGAATGACCACCTGTACTGTTGCTTTCCCTGGGGTGTCGCATCATCCAACAATTaGCTTCCCTCTGGATCCATC +
Preference number: 5 (lower is better)
Translates to: SVRVGQNDHLYCCFPWGVASSNN*LPSGSI
Trigger: GATGGATCCAGAGGGAAGCAAATTGTTGGATGATGC...GACACCCCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS TCA 90 bp ATCAAGTCTTCTAAGTCTGGCAACTTGAGGAAAACAGAGGCAACGTaGGCCAGGGGTCACACACTACTCAGGACACGGCCCTCGTCAGTC +
Preference number: 5 (lower is better)
Translates to: IKSSKSGNLRKTEAT*ARGHTLLRTRPSSV
Trigger: GACTGACGAGGGCCGTGTCCTGAGTAGTGTGTGACCCCTGGCTCACGTTGCCTCTGTTTTCCTCAAGTTGCCAGACTTAGAAGACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575528.5
ENST00000576239.5
CDS-3UTR CAA 90 bp ATGTCCGTCAGGGTCGGCCAGAATGACCACCTGTACTGTTGCTTTCCCTGGGGTAAGCGGTTTCCCACTTaGAATACGAAGTGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: MSVRVGQNDHLYCCFPWGKRFPT*NTKCRA
Trigger: AGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCTT...ACCCCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CAA 90 bp TTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGTGGTCCACCCCACCCTaGACGCCCTGTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LPVRETNQKSIYWELTRQWSTPP*TPCSSS
Trigger: GCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCA...CTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp TTCATGTCCGTCAGGGTCGGCCAGAATGACCACCTGTACTGTTGCTTTCCCTGGAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: FMSVRVGQNDHLYCCFPWRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...CCAGGGAAAGCAACAGTACAGGTGGTCATTCTGGCCGACCCTGACGGACATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp AACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGCGTTGCTGACTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 5 (lower is better)
Translates to: NTFCNFRQWPLQLPGVADSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...GTCAGCAACGCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574554.5
CDS CCA 90 bp AGTGACTACAGACAAGTCAGCCTCAGGCCACCCCCAGAGAACTACTaGGCACAGAGAGATGAGCATTCCTGTCTGGTCCTAAAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: SDYRQVSLRPPPENY*AQRDEHSCLVLKVL
Trigger: GAGAACTTTTAGGACCAGACAGGAATGCTCATCTCTCTGTGCCCAGTAGTTCTCTGGGGGTGGCCTGAGGCTGACTTGTCTGTAGTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571073.5
CDS-3UTR CAA 90 bp TCCTCCCGGGGCCTCGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCAGCCCAGCAAAGCCCTTaGCTTTTCTTCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SSRGLGFKNTFCNFRQWPAQQSP*LFFIFF
Trigger: GAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGC...TGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCGAGGCCCCGGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CAA 90 bp AACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGCGTTGCTGACGCCCAGCAAAGCCCTTaGCTTTTCTTCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NTFCNFRQWPLQLPGVADAQQSP*LFFIFF
Trigger: GAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGC...GTCAGCAACGCCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CAA 90 bp CTGAAGCTTTGGGTTTATTGTGTTTGGCAAACCACTCGTCACTTTTATCTGCTGTGGTCCACCCCACCCTaGACGCCCTGTAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LKLWVYCVWQTTRHFYLLWSTPP*TPCSSS
Trigger: GCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCA...CAGCAGATAAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp GGCGTTGCTGACAGCCTGGCTAGAAGCGAGCGTGATTCCCATAAAGTCATTGCCGCATCATCCAACAATTaGCTTCCCTCTGGATCCATC +
Preference number: 5 (lower is better)
Translates to: GVADSLARSERDSHKVIAASSNN*LPSGSI
Trigger: GATGGATCCAGAGGGAAGCAAATTGTTGGATGATGC...GGCAATGACTTTATGGGAATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CAA 90 bp CTGAGGCAGACTGCGATTCTGCAAATAGAACTTATATCCTCCCGGGGCCTCGGTAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: LRQTAILQIELISSRGLGRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...ACCGAGGCCCCGGGAGGATATAAGTTCTATTTGCAGAATCGCAGTCTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS TCA 90 bp AGTCAGCCTCAGGCCACCCCCAGAGAACTACTGGGCACAGAGAGATaGGCATTCCTGTCTGGTCCTAAAAGTTCTCTTAAGGATGAGATG +
Preference number: 5 (lower is better)
Translates to: SQPQATPRELLGTER*AFLSGPKSSLKDEM
Trigger: CATCTCATCCTTAAGAGAACTTTTAGGACCAGACAGGAATGCTCATCTCTCTGTGCCCAGTAGTTCTCTGGGGGTGGCCTGAGGCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571073.5
CDS-3UTR CAA 90 bp CGGTTTCAAAAACACCTTCTGCAACTTCCGTCAGTGGCCACTCCAGCTTCCTGGAAGCGGTTTCCCACTTaGAATACGAAGTGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RFQKHLLQLPSVATPASWKRFPT*NTKCRA
Trigger: AGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCTT...CCAGGAAGCTGGAGTGGCCACTGACGGAAGTTGCAGAAGGTGTTTTTGAAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CAA 90 bp GTACTGTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCTGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: VLLLSLGCPGSPGESESSAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...AGAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CAA 90 bp AGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGGCATCATCCAACAATTaGCTTCCCTCTGGATCCATC +
Preference number: 5 (lower is better)
Translates to: RSSHRVRRAATSHTHSFLASSNN*LPSGSI
Trigger: GATGGATCCAGAGGGAAGCAAATTGTTGGATGATGC...CAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp AATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTTCTCTACCTGGACTAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: NAQSQQQCRLQQAFSTWTRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...AGTCCAGGTAGAGAACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp CGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGTCGGCCAGAAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: RNASSPTKQISCPSGSARRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...TCTGGCCGACCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp AGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 5 (lower is better)
Translates to: RSSHRVRRAATSHTHSFLSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...CAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp ACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAAAGCGGTTTCCCACTTaGAATACGAAGTGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: TIEERIVRRWEWHHDKALKRFPT*NTKCRL
Trigger: GAGCCTGCACTTCGTATTCAAAGTGGGAAACCGCTT...TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS GCA 90 bp AAGGATGAGATGACCTCAGATGGTACAGAAAGCAGCTGTGGGCAGTaGTCATGGGACCCTACTACAAGCTCCAAAGACTATCCAGCATCT +
Preference number: 5 (lower is better)
Translates to: KDEMTSDGTESSCGQ*SWDPTTSSKDYPAS
Trigger: AGATGCTGGATAGTCTTTGGAGCTTGTAGTAGGGTCCCATGAGCACTGCCCACAGCTGCTTTCTGTACCATCTGAGGTCATCTCATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571073.5
CDS-3UTR CAA 90 bp ACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAAAGCGGTTTCCCACTTaGAATACGAAGTGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: TIEERIVRRWEWHHDKALKRFPT*NTKCRA
Trigger: AGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCTT...TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301328.9
ENST00000301329.10
CDS-3UTR CAA 90 bp AGAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: RSSHRVRRAATSHTHSFLAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...CAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp GAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTGCCCAGCAAAGCCCTTaGCTTTTCTTCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: EARTESGVQQRHTLIPFCAQQSP*LFFIFF
Trigger: GAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGC...ACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp TCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGCCCAGCAAAGCCCTTaGCTTTTCTTCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SEEHLLGTDTSGLTGAGQAQQSP*LFFIFF
Trigger: GAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGC...CTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp CGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGTCGGCCAGAGCATCATCCAACAATTaGCTTCCCTCTGGATCCATC +
Preference number: 5 (lower is better)
Translates to: RNASSPTKQISCPSGSARASSNN*LPSGSI
Trigger: GATGGATCCAGAGGGAAGCAAATTGTTGGATGATGC...TCTGGCCGACCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp TGTTGCTTTCCCTGGGGTGTCCAGGCTCACCAGGGGAGTCAGAATCTTCTGGTTTTGGGTTTATTGTGTTaGGCAAACCACTCGTCACTT +
Preference number: 5 (lower is better)
Translates to: CCFPWGVQAHQGSQNLLVLGLLC*ANHSSL
Trigger: AAGTGACGAGTGGTTTGCCAAACACAATAAACCCAA...AACCAGAAGATTCTGACTCCCCTGGTGAGCCTGGACACCCCAGGGAAAGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp GGCGTTGCTGACAGCCTGGCTAGAAGCGAGCGTGATTCCCATAAAGTCATTGCCTTGGGTTTATTGTGTTaGGCAAACCACTCGTCACTT +
Preference number: 5 (lower is better)
Translates to: GVADSLARSERDSHKVIALGLLC*ANHSSL
Trigger: AAGTGACGAGTGGTTTGCCAAACACAATAAACCCAA...GGCAATGACTTTATGGGAATCACGCTCGCTTCTAGCCAGGCTGTCAGCAACGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CAA 90 bp ATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACAATCACTACCCAAGCCTCCTaGCCTGTACGGGAAACAAAT +
Preference number: 5 (lower is better)
Translates to: IRNPNQSHVHAAVLVWTITTQAS*PVRETN
Trigger: ATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGT...GATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp TGCTTCATCCCCGACAAAGCAAATTTCATGTCCGTCAGGGTCGGCCAGAATGACTCTAAGTCTGGCAACTaGAGGAAAACAGAGGCAACG +
Preference number: 5 (lower is better)
Translates to: CFIPDKANFMSVRVGQNDSKSGN*RKTEAT
Trigger: CGTTGCCTCTGTTTTCCTCAAGTTGCCAGACTTAGA...GTCATTCTGGCCGACCCTGACGGACATGAAATTTGCTTTGTCGGGGATGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575528.5
CDS-3UTR CAA 90 bp AATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTTCTCTACCTGGACTGCCCAGCAAAGCCCTTaGCTTTTCTTCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NAQSQQQCRLQQAFSTWTAQQSP*LFFIFF
Trigger: GAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGC...AGTCCAGGTAGAGAACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp AAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGGCATCATCCAACAATTaGCTTCCCTCTGGATCCATC +
Preference number: 5 (lower is better)
Translates to: KSEEHLLGTDTSGLTGAGASSNN*LPSGSI
Trigger: GATGGATCCAGAGGGAAGCAAATTGTTGGATGATGC...CCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp ACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAGAAGCTTTGGGTTTATaGTGTTTGGCAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: TIEERIVRRWEWHHDKALEALGL*CLANHS
Trigger: CGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTC...TAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp ACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TNQKSIYWELTRQASQVLRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...CAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp AAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 5 (lower is better)
Translates to: KSEEHLLGTDTSGLTGAGSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...CCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp GAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 5 (lower is better)
Translates to: EVTLTIRNPNQSHVHAAVSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...GACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp TCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGTTTTATCTGCTGCCATaGCATCATCCAACAATTTGC +
Preference number: 5 (lower is better)
Translates to: SEEHLLGTDTSGLTGAGQFYLLP*HHPTIC
Trigger: GCAAATTGTTGGATGATGCAATGGCAGCAGATAAAA...CTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp TGCCAGAATAAGACAATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACTTGGGTTTATTGTGTTaGGCAAACCACTCGTCACTT +
Preference number: 5 (lower is better)
Translates to: CQNKTIEERIVRRWEWHHLGLLC*ANHSSL
Trigger: AAGTGACGAGTGGTTTGCCAAACACAATAAACCCAA...GTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATTGTCTTATTCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp GAAATACACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: EIHKSALPKPPCLYGKQIRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGTGTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR CAA 90 bp CAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACTACCCAAGCCTCCTaGCCTGTACGGGAAACAAAT +
Preference number: 5 (lower is better)
Translates to: QASLPVRETNQKSIYWELTTQAS*PVRETN
Trigger: ATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGT...CAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR CAA 90 bp CGATTCAGAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATGCACTACCCAAGCCTCCTaGCCTGTACGGGAAACAAAT +
Preference number: 5 (lower is better)
Translates to: RFRGNPNYPQSQPKSCSCTTQAS*PVRETN
Trigger: ATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGT...GCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTCTGAATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp CAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTGGGCAGGCAGAGCTTTCAAAGATaGAAATACACAAATCTGCAC +
Preference number: 5 (lower is better)
Translates to: QKSIYWELTRQASQVLGRQSFQR*KYTNLH
Trigger: GTGCAGATTTGTGTATTTCAATCTTTGAAAGCTCTG...CCTGCCCAGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp GAAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTCCCATCATAAGGCTTaGAGAAACTGTCTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: EARTESGVQQRHTLIPFCSHHKA*RNCLLL
Trigger: TAACAGAAGACAGTTTCTCAAAGCCTTATGATGGGA...ACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301328.9
CDS-3UTR CAA 90 bp CGATTCAGAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATGCAAGCGGTTTCCCACTTaGAATACGAAGTGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RFRGNPNYPQSQPKSCSCKRFPT*NTKCRA
Trigger: AGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCTT...GCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTCTGAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301328.9
ENST00000301329.10
CDS-3UTR CAA 90 bp CCAGCTTACACTGGTTATCAGCATAGCCCAGCAAAGCCCTTTGCTTTTCTTCATAAGCGGTTTCCCACTTaGAATACGAAGTGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: PAYTGYQHSPAKPFAFLHKRFPT*NTKCRA
Trigger: AGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCTT...ATGAAGAAAAGCAAAGGGCTTTGCTGGGCTATGCTGATAACCAGTGTAAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CAA 90 bp GGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCATCATCCAACAATTaGCTTCCCTCTGGATCCATC +
Preference number: 5 (lower is better)
Translates to: GNKSEEHLLGTDTSGLTGASSNN*LPSGSI
Trigger: GATGGATCCAGAGGGAAGCAAATTGTTGGATGATGC...ACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp AATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCGTTCTCTACCTGGACTTTTTATCTGCTGCCATaGCATCATCCAACAATTTGC +
Preference number: 5 (lower is better)
Translates to: NAQSQQQCRLQQAFSTWTFYLLP*HHPTIC
Trigger: GCAAATTGTTGGATGATGCAATGGCAGCAGATAAAA...AGTCCAGGTAGAGAACGCCTGCTGTAATCTACACTGTTGCTGGGACTGCGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp TTGCTGACAGCCTGGCTAGAAGCGAGCGTGATTCCCATAAAGTCATTGCCAAGCTTTTATCTGCTGCCATaGCATCATCCAACAATTTGC +
Preference number: 5 (lower is better)
Translates to: LLTAWLEASVIPIKSLPSFYLLP*HHPTIC
Trigger: GCAAATTGTTGGATGATGCAATGGCAGCAGATAAAA...GCTTGGCAATGACTTTATGGGAATCACGCTCGCTTCTAGCCAGGCTGTCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CAA 90 bp AATAGAAGAGCGTATCGTCAGGCGCTGGGAATGGCACCACGACAAGGCATTAATTTGGGTTTATTGTGTTaGGCAAACCACTCGTCACTT +
Preference number: 5 (lower is better)
Translates to: NRRAYRQALGMAPRQGINLGLLC*ANHSSL
Trigger: AAGTGACGAGTGGTTTGCCAAACACAATAAACCCAA...ATTAATGCCTTGTCGTGGTGCCATTCCCAGCGCCTGACGATACGCTCTTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp CGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGAAGCTTTGGGTTTATaGTGTTTGGCAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: RETNQKSIYWELTRQASQEALGL*CLANHS
Trigger: CGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTC...CTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp CCCTTTTCATCAAGTCTTCTAAGTCTGGCAACTCTTTCTGGGGGCAAGAGAAGGGAAGCTTTGGGTTTATaGTGTTTGGCAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: PFSSSLLSLATLSGGKRREALGL*CLANHS
Trigger: CGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTC...CCTTCTCTTGCCCCCAGAAAGAGTTGCCAGACTTAGAAGACTTGATGAAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CAA 90 bp TCACTCATCCAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGAAGGAATCACAGAGGCTaGCTCTGCATCATGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SLIQHSYIQNAQSQQQCRRNHRG*LCIMSS
Trigger: GGAAGACATGATGCAGAGCAAGCCTCTGTGATTCCT...TCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTGGATGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp GGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 5 (lower is better)
Translates to: GNKSEEHLLGTDTSGLTGSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...ACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp GCGCTGGGAATGGCACCACGACAAGGCATTAATGTGGATTCACTTGCACAGCTGCAGAGCTTTCAAAGATaGAAATACACAAATCTGCAC +
Preference number: 5 (lower is better)
Translates to: ALGMAPRQGINVDSLAQLQSFQR*KYTNLH
Trigger: GTGCAGATTTGTGTATTTCAATCTTTGAAAGCTCTG...CAGCTGTGCAAGTGAATCCACATTAATGCCTTGTCGTGGTGCCATTCCCAGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp GAAATACACAAATCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: EIHKSALPKPPCLYGKQIAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...GATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGATTTGTGTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR CAA 90 bp CGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTCAGGCCCAAGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: RRHNCKSVLRQNDHPQAQAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...TTGGGCCTGAGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
ENST00000576670.1
CDS-3UTR CAA 90 bp CGATTCAGAGGTAACCCTAACTATCCGCAATCCCAACCAAAGTCATGTTCATGCGCCCAGCAAAGCCCTTaGCTTTTCTTCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RFRGNPNYPQSQPKSCSCAQQSP*LFFIFF
Trigger: GAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGC...GCATGAACATGACTTTGGTTGGGATTGCGGATAGTTAGGGTTACCTCTGAATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp GCTCTCATAAAAGCTACACGATTCAGAGGTAACCCTAACTATCCGCAATCCCAAGCATCATCCAACAATTaGCTTCCCTCTGGATCCATC +
Preference number: 5 (lower is better)
Translates to: ALIKATRFRGNPNYPQSQASSNN*LPSGSI
Trigger: GATGGATCCAGAGGGAAGCAAATTGTTGGATGATGC...TTGGGATTGCGGATAGTTAGGGTTACCTCTGAATCGTGTAGCTTTTATGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp ATCCGCAATCCCAACCAAAGTCATGTTCATGCCGCTGTCCTAGTCTGGACAATCTTTTATCTGCTGCCATaGCATCATCCAACAATTTGC +
Preference number: 5 (lower is better)
Translates to: IRNPNQSHVHAAVLVWTIFYLLP*HHPTIC
Trigger: GCAAATTGTTGGATGATGCAATGGCAGCAGATAAAA...GATTGTCCAGACTAGGACAGCGGCATGAACATGACTTTGGTTGGGATTGCGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp GGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGAAGCTTTGGGTTTATaGTGTTTGGCAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: GNKSEEHLLGTDTSGLTGEALGL*CLANHS
Trigger: CGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTC...ACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp TGTACGGGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCGAAGCTTTGGGTTTATaGTGTTTGGCAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: CTGNKSEEHLLGTDTSGLEALGL*CLANHS
Trigger: CGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTC...GAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCCCGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp CCAGCTTACACTGGTTATCAGCATAGCCCAGCAAAGCCCTTTGCTTTTCTTCATGAAGCTTTGGGTTTATaGTGTTTGGCAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: PAYTGYQHSPAKPFAFLHEALGL*CLANHS
Trigger: CGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTC...ATGAAGAAAAGCAAAGGGCTTTGCTGGGCTATGCTGATAACCAGTGTAAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CAA 90 bp ATTTCCCATCATAAGGCTTTGAGAAACTGTCTTCTGTTATCCGGGTGTAGTCAGACTACCCAAGCCTCCTaGCCTGTACGGGAAACAAAT +
Preference number: 5 (lower is better)
Translates to: ISHHKALRNCLLLSGCSQTTQAS*PVRETN
Trigger: ATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGT...CTGACTACACCCGGATAACAGAAGACAGTTTCTCAAAGCCTTATGATGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574554.5
CDS-3UTR CAA 90 bp AAGCTCGCACAGAGTCAGGCGTGCAGCAACGTCACACACTCATTCCTTTCTGTTCAGAGCTTTCAAAGATaGAAATACACAAATCTGCAC +
Preference number: 5 (lower is better)
Translates to: KLAQSQACSNVTHSFLSVQSFQR*KYTNLH
Trigger: GTGCAGATTTGTGTATTTCAATCTTTGAAAGCTCTG...AACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGCCTGACTCTGTGCGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp GCGATTCTGCAAATAGAACTTATATCCTCCCGGGGCCTCGGTTTCAAAAACACCATAAATTGTGAAGTGTaGCTAGTACTGCTCACAGCG +
Preference number: 5 (lower is better)
Translates to: AILQIELISSRGLGFKNTINCEV*LVLLTA
Trigger: CGCTGTGAGCAGTACTAGCAACACTTCACAATTTAT...GGTGTTTTTGAAACCGAGGCCCCGGGAGGATATAAGTTCTATTTGCAGAATCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575851.5
CDS-3UTR CAA 90 bp CAACACAGTTATATACAGAATGCGCAGTCCCAGCAACAGTGTAGATTACAGCAGGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: QHSYIQNAQSQQQCRLQQAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...CTGCTGTAATCTACACTGTTGCTGGGACTGCGCATTCTGTATATAACTGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
CDS-3UTR CAA 90 bp ATTGCCAAGCTTGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAAGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: IAKLVVSDAIIVSQFCDKAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...TTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACAAGCTTGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CAA 90 bp CAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAAATGCTTCATCCCCGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: QFASLWIHLRKFSKCFIPAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...GGGGATGAAGCATTTCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CAA 90 bp ATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCATAAGGCTTGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: ILRPKSHHCFTPFPIIRLAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...AAGCCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
CDS-3UTR CAA 90 bp GACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCGCCCAAATCCCACCATaGTTTTACTCCATTTCCCAT +
Preference number: 5 (lower is better)
Translates to: DKMIILRPKSHHCFTPFPAQIPP*FYSISH
Trigger: ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGC...GGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
ENST00000576670.1
CDS-3UTR CAA 90 bp TCTGCACTACCCAAGCCTCCTTGCCTGTACGGGAAACAAATCAGAAGAGCATTTTTTTATCTGCTGCCATaGCATCATCCAACAATTTGC +
Preference number: 5 (lower is better)
Translates to: SALPKPPCLYGKQIRRAFFYLLP*HHPTIC
Trigger: GCAAATTGTTGGATGATGCAATGGCAGCAGATAAAA...AAATGCTCTTCTGATTTGTTTCCCGTACAGGCAAGGAGGCTTGGGTAGTGCAGA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000574554.5
CDS-3UTR CAA 90 bp GGAAACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTTTGGGTTTATTGTGTTaGGCAAACCACTCGTCACTT +
Preference number: 5 (lower is better)
Translates to: GNKSEEHLLGTDTSGLTGLGLLC*ANHSSL
Trigger: AAGTGACGAGTGGTTTGCCAAACACAATAAACCCAA...ACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp AACAAATCAGAAGAGCATTTATTGGGAACTGACACGTCAGGCCTCACAGGTGCTTTGGGTTTATTGTGTTaGGCAAACCACTCGTCACTT +
Preference number: 5 (lower is better)
Translates to: NKSEEHLLGTDTSGLTGALGLLC*ANHSSL
Trigger: AAGTGACGAGTGGTTTGCCAAACACAATAAACCCAA...AGCACCTGTGAGGCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGATTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000536578.5
ENST00000573137.1
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp ATCTGCTGCCATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAGAAGCTTTGGGTTTATaGTGTTTGGCAAACCACTCG +
Preference number: 5 (lower is better)
Translates to: ICCHCIIQQFASLWIHLREALGL*CLANHS
Trigger: CGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTC...TCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGCAGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp CTGAAGCTTTGGGTTTATTGTGTTTGGCAAACCACTCGTCACTTTTATCTGCTGTCAGAAGAGCATTTATaGGGAACTGACACGTCAGGC +
Preference number: 5 (lower is better)
Translates to: LKLWVYCVWQTTRHFYLLSEEHL*GTDTSG
Trigger: GCCTGACGTGTCAGTTCCCAATAAATGCTCTTCTGA...CAGCAGATAAAAGTGACGAGTGGTTTGCCAAACACAATAAACCCAAAGCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575528.5
CDS-3UTR CAA 90 bp ATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCATAAGGTTGGGTTTATTGTGTTaGGCAAACCACTCGTCACTT +
Preference number: 5 (lower is better)
Translates to: IILRPKSHHCFTPFPIIRLGLLC*ANHSSL
Trigger: AAGTGACGAGTGGTTTGCCAAACACAATAAACCCAA...CCTTATGATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CAA 90 bp TCTCTATGTGTTCTTTGGGAACCAGGATCCTCTGAGTCAATCCCTTCCAATCTCGACTGGTATCACAGCTaGATTTCAGAAGCTTACTTT +
Preference number: 5 (lower is better)
Translates to: SLCVLWEPGSSESIPSNLDWYHS*ISEAYF
Trigger: AAAGTAAGCTTCTGAAATCAAGCTGTGATACCAGTC...GAGATTGGAAGGGATTGACTCAGAGGATCCTGGTTCCCAAAGAACACATAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301329.10
CDS-3UTR CAA 90 bp GAGTTACTTTTAATACAGGATCTGACTGAGGCAGACTGCGATTCTGCAAATAGAGCCCAGCAAAGCCCTTaGCTTTTCTTCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ELLLIQDLTEADCDSANRAQQSP*LFFIFF
Trigger: GAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGC...TCTATTTGCAGAATCGCAGTCTGCCTCAGTCAGATCCTGTATTAAAAGTAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000574554.5
ENST00000574581.5
ENST00000575790.5
ENST00000575851.5
CDS-3UTR CAA 90 bp ATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTCGAGCCCAGCAAAGCCCTTaGCTTTTCTTCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: IASSNNLLPSGSILESSRAQQSP*LFFIFF
Trigger: GAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGC...TCGAGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp ATCTTAGAAAGTTCTCGAAATGCTTCATCCCCGACAAAGCAAATTTCATGTCCGGCCCAGCAAAGCCCTTaGCTTTTCTTCATCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ILESSRNASSPTKQISCPAQQSP*LFFIFF
Trigger: GAAAAAGATGAAGAAAAGCAAAGGGCTTTGCTGGGC...CGGACATGAAATTTGCTTTGTCGGGGATGAAGCATTTCGAGAACTTTCTAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp CTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTTTTATCTGCTGCCATaGCATCATCCAACAATTTGC +
Preference number: 5 (lower is better)
Translates to: LRQNDHPQAQIPPLFYSIFYLLP*HHPTIC
Trigger: GCAAATTGTTGGATGATGCAATGGCAGCAGATAAAA...AATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000574554.5
ENST00000575851.5
CDS-3UTR CAA 90 bp CTGCGACAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATCATAAGGCTTaGAGAAACTGTCTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: LRQNDHPQAQIPPLFYSISHHKA*RNCLLL
Trigger: TAACAGAAGACAGTTTCTCAAAGCCTTATGATGGGA...AATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTGTCGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
CDS-3UTR CAA 90 bp GCCATTGCATCATCCAACAATTTGCTTCCCTCTGGATCCATCTTAGAAAGTTCTTTTTATCTGCTGCCATaGCATCATCCAACAATTTGC +
Preference number: 5 (lower is better)
Translates to: AIASSNNLLPSGSILESSFYLLP*HHPTIC
Trigger: GCAAATTGTTGGATGATGCAATGGCAGCAGATAAAA...AGAACTTTCTAAGATGGATCCAGAGGGAAGCAAATTGTTGGATGATGCAATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000574554.5
ENST00000575528.5
ENST00000575851.5
CDS-3UTR CAA 90 bp CAAAATGATCATCCTCAGGCCCAAATCCCACCATTGTTTTACTCCATTTCCCATTCCCATCATAAGGCTTaGAGAAACTGTCTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: QNDHPQAQIPPLFYSISHSHHKA*RNCLLL
Trigger: TAACAGAAGACAGTTTCTCAAAGCCTTATGATGGGA...ATGGGAAATGGAGTAAAACAATGGTGGGATTTGGGCCTGAGGATGATCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
CDS-3UTR CAA 90 bp TGTAGTCTCCGACGCCATAATTGTAAGTCAGTTCTGCGACAAAATGATCATCCTTCCCATCATAAGGCTTaGAGAAACTGTCTTCTGTTA +
Preference number: 5 (lower is better)
Translates to: CSLRRHNCKSVLRQNDHPSHHKA*RNCLLL
Trigger: TAACAGAAGACAGTTTCTCAAAGCCTTATGATGGGA...AGGATGATCATTTTGTCGCAGAACTGACTTACAATTATGGCGTCGGAGACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572220.1
ENST00000574554.5
ENST00000575790.5
ENST00000576670.1
CDS TCA 90 bp GAACAGAATCCTAAAGACAGTTCTCCAACTGACCTGTTATTTCCTTaGCTATCAATCAACAAGCATGAAATTCCTAATAGGCCTTGGACT +
Preference number: 5 (lower is better)
Translates to: EQNPKDSSPTDLLFP*LSINKHEIPNRPWT
Trigger: AGTCCAAGGCCTATTAGGAATTTCATGCTTGTTGATTGATAGTCAAGGAAATAACAGGTCAGTTGGAGAACTGTCTTTAGGATTCTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571073.5
CDS TCA 72 bp GCCGTGACGTCACTAGCCGCCGACGGCGCGCTTTCGTaGCGCAGCCCGGGTCTCAGGGAACATGGCGGCGCT +
Preference number: 6 (lower is better)
Translates to: AVTSLAADGALS*RSPGLREHGGA
Trigger: AGCGCCGCCATGTTCCCTGAGACCCGGGCTGCGTCACGAAAGCGCGCCGTCGGCGGCTAGTGACGTCACGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS GCA 72 bp AGGTCAAGGCTGCAGAAAGCCACGATGGTGCCCCACTaGACTCCACCACGTCAGGCCTCACAGGTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RSRLQKATMVPH*TPPRQASQVLG
Trigger: GCCCAGCACCTGTGAGGCCTGACGTGGTGGAGTGCAGTGGGGCACCATCGTGGCTTTCTGCAGCCTTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575800.1
CDS GCA 72 bp AGCCCCAGAGGTCAAGGCTGCAGAAAGCCACGATGGTaGCCCACTGCACTCCACCACGTCAGGCCTCACAGG +
Preference number: 6 (lower is better)
Translates to: SPRGQGCRKPRW*PTALHHVRPHR
Trigger: CCTGTGAGGCCTGACGTGGTGGAGTGCAGTGGGGCACCATCGTGGCTTTCTGCAGCCTTGACCTCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575800.1
CDS CCA 72 bp TTGAGCCCCAGAGGTCAAGGCTGCAGAAAGCCACGATaGTGCCCCACTGCACTCCACCACGTCAGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: LSPRGQGCRKPR*CPTALHHVRPH
Trigger: GTGAGGCCTGACGTGGTGGAGTGCAGTGGGGCACCATCGTGGCTTTCTGCAGCCTTGACCTCTGGGGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575800.1
CDS TCA 72 bp ACTTTGAATACGAAGTGCAGGCTCTGCGAGCAGCCATaGTTCCCGCCGCACGCAGCCGTCACGCGCACCGTA +
Preference number: 6 (lower is better)
Translates to: TLNTKCRLCEQP*FPPHAAVTRTV
Trigger: TACGGTGCGCGTGACGGCTGCGTGCGGCGGGAATCATGGCTGCTCGCAGAGCCTGCACTTCGTATTCAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS GCA 72 bp GCCGTCTGGAAGCGGTTTCCCACTTTGAATACGAAGTaGAGAGCTCTGCGAGCAGCCATGATTCCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: AVWKRFPTLNTK*RALRAAMIPAA
Trigger: TGCGGCGGGAATCATGGCTGCTCGCAGAGCTCTGCACTTCGTATTCAAAGTGGGAAACCGCTTCCAGACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301328.9
ENST00000301329.10
ENST00000572220.1
ENST00000574354.5
ENST00000575790.5
ENST00000575851.5
ENST00000576239.5
ENST00000576419.1
ENST00000576750.1
CDS TCA 72 bp TCTAAGTCTGGCAACTTGAGGAAAACAGAGGCAACGTaGGCCAGGGGTCACACACTACTCAGGACACGGCCC +
Preference number: 6 (lower is better)
Translates to: SKSGNLRKTEAT*ARGHTLLRTRP
Trigger: GGGCCGTGTCCTGAGTAGTGTGTGACCCCTGGCTCACGTTGCCTCTGTTTTCCTCAAGTTGCCAGACTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575528.5
ENST00000576239.5
CDS TCA 72 bp GATAGAAACGCGCCGTCTGGAAGCGGTTTCCCACTTTaGATACGAAGTGCAGGCTCTGCGAGCAGCCATGAT +
Preference number: 6 (lower is better)
Translates to: DRNAPSGSGFPL*IRSAGSASSHD
Trigger: ATCATGGCTGCTCGCAGAGCCTGCACTTCGTATTCAAAGTGGGAAACCGCTTCCAGACGGCGCGTTTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536578.5
CDS TCA 72 bp TTCTTCCAAAAGCTGCTGCATGGTCCACCCCACCCTTaGCGCCCTGTAGCTCCAGCTTACACTGAAATAGGA +
Preference number: 6 (lower is better)
Translates to: FFQKLLHGPPHP*RPVAPAYTEIG
Trigger: TCCTATTTCAGTGTAAGCTGGAGCTACAGGGCGTCAAGGGTGGGGTGGACCATGCAGCAGCTTTTGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576239.5
CDS GCA 72 bp ATGACCTCAGATGGTACAGAAAGCAGCTGTGGGCAGTaGTCATGGGACCCTACTACAAGCTCCAAAGACTAT +
Preference number: 6 (lower is better)
Translates to: MTSDGTESSCGQ*SWDPTTSSKDY
Trigger: ATAGTCTTTGGAGCTTGTAGTAGGGTCCCATGAGCACTGCCCACAGCTGCTTTCTGTACCATCTGAGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571073.5
CDS TCA 72 bp TCCTGTCTGGTCCTAAAAGTTCTCTTAAGGATGAGATaGCCTCAGATGGTACAGAAAGCAGCTGTGGGCAGT +
Preference number: 6 (lower is better)
Translates to: SCLVLKVLLRMR*PQMVQKAAVGS
Trigger: ACTGCCCACAGCTGCTTTCTGTACCATCTGAGGTCATCTCATCCTTAAGAGAACTTTTAGGACCAGACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571073.5
CDS CCA 72 bp AGCTCAAACGATCTGGTATCAAGCGTTACCTCTTTCTaGGGGCAAGAGAAGGCAATTCTTCCAAAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SSNDLVSSVTSF*GQEKAILPKAA
Trigger: AGCAGCTTTTGGAAGAATTGCCTTCTCTTGCCCCCAGAAAGAGGTAACGCTTGATACCAGATCGTTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576239.5
CDS CCA 72 bp TGGGTTGAACTAGCTAGTCAGAAAGCTCAAACGATCTaGTATCAAGCGTTACCTCTTTCTGGGGGCAAGAGA +
Preference number: 6 (lower is better)
Translates to: WVELASQKAQTI*YQALPLSGGKR
Trigger: TCTCTTGCCCCCAGAAAGAGGTAACGCTTGATACCAGATCGTTTGAGCTTTCTGACTAGCTAGTTCAACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576239.5
CDS GCA 72 bp AGAACTTTCCAACTTCATCTGTTTGAAACAACAGCTTaGAGCCTGAACAACGCAGTGAGACGGTCGCTACAA +
Preference number: 6 (lower is better)
Translates to: RTFQLHLFETTA*SLNNAVRRSLQ
Trigger: TTGTAGCGACCGTCTCACTGCGTTGTTCAGGCTGCAAGCTGTTGTTTCAAACAGATGAAGTTGGAAAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575800.1
CDS CCA 72 bp CTATCAATCAACAAGCATGAAATTCCTAATAGGCCTTaGACTGTTCCAACTTGTCACGGTACTAAGCTTAAG +
Preference number: 6 (lower is better)
Translates to: LSINKHEIPNRP*TVPTCHGTKLK
Trigger: CTTAAGCTTAGTACCGTGACAAGTTGGAACAGTCCAAGGCCTATTAGGAATTTCATGCTTGTTGATTGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571073.5
CDS TCA 72 bp CCTAAAGACAGTTCTCCAACTGACCTGTTATTTCCTTaGCTATCAATCAACAAGCATGAAATTCCTAATAGG +
Preference number: 6 (lower is better)
Translates to: PKDSSPTDLLFP*LSINKHEIPNR
Trigger: CCTATTAGGAATTTCATGCTTGTTGATTGATAGTCAAGGAAATAACAGGTCAGTTGGAGAACTGTCTTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571073.5
CDS CAA 72 bp AGGAGTATCAGATACCATAAAGAACCAAGGCGCCATTaGTTTGAATTTATTATCTCAGCTGCTCTTGAAACA +
Preference number: 6 (lower is better)
Translates to: RSIRYHKEPRRH*FEFIISAALET
Trigger: TGTTTCAAGAGCAGCTGAGATAATAAATTCAAACAAATGGCGCCTTGGTTCTTTATGGTATCTGATACTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576239.5