RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLMP (Homo sapiens)

Ensembl gene IDs: ENSG00000198715

Ensembl transcript IDs: ENST00000362007.6, ENST00000368264.1, ENST00000461597.1, ENST00000472870.5, ENST00000476177.6, ENST00000479084.1, ENST00000481050.1, ENST00000484214.1, ENST00000497831.1, ENST00000497955.1, ENST00000612353.4, ENST00000614643.4, ENST00000622703.4, ENST00000647767.1

Found 567 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGTCGATGGAGTGCTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTaGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTCCC +
Preference number: 1 (lower is better)
Translates to: SSMECCSCIEGQSGP*PNVATSSPNRERFP
Trigger: GGGAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR CCA 90 bp GTAGCTGGTCCAACTGGAAGACGGCCGGTGCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCA +
Preference number: 1 (lower is better)
Translates to: VAGPTGRRPVHIHRR*SAAPALRGSQGPGP
Trigger: TGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGGACCAGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR GCA 90 bp TCCAACTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCAATGTGGCT +
Preference number: 1 (lower is better)
Translates to: SNWKTAGAYSSSMEC*SCIEGQSGPWPNVA
Trigger: AGCCACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR GCA 90 bp TGGTCCAACTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCAATGTG +
Preference number: 1 (lower is better)
Translates to: WSNWKTAGAYSSSME*CSCIEGQSGPWPNV
Trigger: CACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR GCA 90 bp AATAAATCTATTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATaGCTCTCATTTAGGCCTGCAAGTCCCATCCAAGGGAAATGTGTG +
Preference number: 1 (lower is better)
Translates to: NKSIFLPSRAANQSE*LSFRPASPIQGKCV
Trigger: CACACATTTCCCTTGGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR TCA 90 bp GCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGACCACTGTGCAAAGCCTaGTGGGAGGGAGCCCCACAG +
Preference number: 2 (lower is better)
Translates to: ATVQSLMGGSPTVAGPTGPLCKA*WEGAPQ
Trigger: CTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGG...TCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR TCA 90 bp CTGTGTGCAGGAGGCGAGGGGGTTGGGCTGGTCGGCTGGACCTGGAAAAGGCCTTTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: LCAGGEGVGLVGWTWKRPFMGWP*NVALRV
Trigger: CACCCTGAGTGCCACATTTCAAGGCCACCCCATGAA...AGGCCTTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTGCACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR CCA 90 bp GCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGAGCGAGGGGGTTGGGCTaGTCGGCTGGACCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: ATVQSLMGGSPTVAGPTGARGLG*SAGPGK
Trigger: TTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGC...TCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR TCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR TCA 90 bp CCAACAAAGTATGAAGGAAGCCCCACCTGGGGGTCTCCAGGAAGTCGAGGCTGGAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 2 (lower is better)
Translates to: PTKYEGSPTWGSPGSRGWSKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...CCAGCCTCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTCATACTTTGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR GCA 90 bp TCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCAATAGCCCTGTCCCCTaGCCGCCTCCAAAGTCCCCC +
Preference number: 2 (lower is better)
Translates to: SRAANQSECLSFRPASPINSPVP*PPPKSP
Trigger: GGGGGACTTTGGAGGCGGGCAGGGGACAGGGCTATT...GATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR GCA 90 bp GGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAAAGAGGACCAACCTGTaGCCGACCCTCTTTTCCTTG +
Preference number: 2 (lower is better)
Translates to: GSKPLVATVQSLMGGSPTKRTNL*PTLFSL
Trigger: CAAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTT...TGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
3UTR-3UTR CCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAACCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGA +
Preference number: 2 (lower is better)
Translates to: EGNTKGTLSIALSPARLQPGSRG*PLRFHR
Trigger: TCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR CCA 90 bp GGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGCCTCCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGA +
Preference number: 2 (lower is better)
Translates to: GNIARPCLWGSPGSRGWPPGSRG*PLRFHR
Trigger: TCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG...AGGCCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
3UTR-3UTR CCA 90 bp AGTCAGGGCCCTGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTCGGTGGCCTTGAAATGTaGCACTCAGGGTGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: SQGPGPMWLPPAQTGNGFGGLEM*HSGWQD
Trigger: ATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACC...GAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGGGCCCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR TCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR GCA 90 bp ACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCCGACCCTCTTTTCCTTaGCACTCCCAGCCTTATTCT +
Preference number: 2 (lower is better)
Translates to: TGRHCAKPDGREPHSSWSRPSFP*HSQPYS
Trigger: AGAATAAGGCTGGGAGTGGCAAGGAAAAGAGGGTCG...GGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
3UTR-3UTR CCA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCAGAAGGAAGCCCCACCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 2 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPEGSPT*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTC...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR TCA 90 bp CCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCCGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: PGQPTSQNASHLGLQVPSVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...GGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR CCA 90 bp TCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGAAGGAAGCCCCACCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 2 (lower is better)
Translates to: SCLPGQPTSQNASHLGLQEGSPT*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTC...TTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR CCA 90 bp GACCCAAAGAAGGCTCGGACAATGGGTGACTGGGGAAGAGAGTATGCTAAGGCAGACCTGGAAAAGGCCTaGACCCTGAAGGCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: DPKKARTMGDWGREYAKADLEKA*TLKARL
Trigger: CAGCCTGGCCTTCAGGGTCCAGGCCTTTTCCAGGTC...TGCCTTAGCATACTCTCTTCCCCAGTCACCCATTGTCCGAGCCTTCTTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR TCA 90 bp TTCTTCTTTCTCCAAGAAAAGCACACTGGTCTGGGGGTCTCCAGGAAGTCGAGGAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 2 (lower is better)
Translates to: FFFLQEKHTGLGVSRKSRSKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...CCTCGACTTCCTGGAGACCCCCAGACCAGTGTGCTTTTCTTGGAGAAAGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000461597.1
3UTR-3UTR GCA 90 bp AGGCACAGAAGTTATTCTGGGACCCAAAGAAGGCTCGGACAATGGGTGACTGGGATGGAGTGCTGCTCCTaGATTGAGGGGCAGTCAGGG +
Preference number: 2 (lower is better)
Translates to: RHRSYSGTQRRLGQWVTGMECCS*IEGQSG
Trigger: CCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCAT...CCCAGTCACCCATTGTCCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR CCA 90 bp TCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 2 (lower is better)
Translates to: SRAANQSECLSFRPASPISEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...GATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR TCA 90 bp GAATCACTCAAGGCCAGAAGTTTGAGCCCAGACTGGCAACATAGCAAGACCATGGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: ESLKARSLSPDWQHSKTMGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...CATGGTCTTGCTATGTTGCCAGTCTGGGCTCAAACTTCTGGCCTTGAGTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
3UTR-3UTR GCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAAGAGTACTTCTTGTGGTaGAGCAGCAGAACCAAGCCG +
Preference number: 2 (lower is better)
Translates to: GSRGWPLRFHRKARWGSEEYFLW*SSRTKP
Trigger: CGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTC...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472870.5
3UTR-3UTR CCA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCGAAGGAAGCCCCACCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 2 (lower is better)
Translates to: MCGDARRQHQGDLINSPVEGSPT*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTC...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR TCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR TCA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: REMCGDARRQHQGDLINSVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR GCA 90 bp TCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGGAAATGTGTGGAGATaGAAGAAGGCAACACCAAGG +
Preference number: 2 (lower is better)
Translates to: SCLPGQPTSQNASHLGLQGNVWR*KKATPR
Trigger: CCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCC...TTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR-3UTR CCA 90 bp GGGTGGGGGAGAATAGGGTGGGAATCGGTAAAGGGAGGAAGATATTTTACTATAAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 2 (lower is better)
Translates to: GWGRIGWESVKGGRYFTISEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...TATAGTAAAATATCTTCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
3UTR-3UTR TCA 90 bp ACTCAATGTATTATCACACTGGCTCTTCTTCTTCCTTCTTCCTCCTTTCTTTCTGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: TQCIITLALLLPSSSFLSGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...AGAAAGAAAGGAGGAAGAAGGAAGAAGAAGAGCCAGTGTGATAATACATTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461597.1
3UTR-3UTR CCA 90 bp GGGTGGGGGAGAATAGGGTGGGAATCGGTAAAGGGAGGAAGATATTTTACTATAAGTTTGAGCCCAGACTaGCAACATAGCAAGACCATG +
Preference number: 2 (lower is better)
Translates to: GWGRIGWESVKGGRYFTISLSPD*QHSKTM
Trigger: CATGGTCTTGCTATGTTGCCAGTCTGGGCTCAAACT...TATAGTAAAATATCTTCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
3UTR-3UTR CCA 90 bp TCACTCAATGTATTATCACACTGGCTCTTCTTCTTCCTTCTTCCTCCTTTCTTTAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 2 (lower is better)
Translates to: SLNVLSHWLFFFLLPPFFSEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...AAAGAAAGGAGGAAGAAGGAAGAAGAAGAGCCAGTGTGATAATACATTGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461597.1
3UTR-3UTR CCA 90 bp TGGGGGAAAAATAAACATGCAGAGACAGTCTATATAGTATGCTGCCATACTTCACCAAGAAAAGCACACTaGTCTGGGGGTCTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: WGKNKHAETVYIVCCHTSPRKAH*SGGLQE
Trigger: TTCCTGGAGACCCCCAGACCAGTGTGCTTTTCTTGG...TGAAGTATGGCAGCATACTATATAGACTGTCTCTGCATGTTTATTTTTCCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000461597.1
3UTR CCA 72 bp GGTGTCTGCTGTGTGCAGGAGGCGAGGGGGTTGGGCTaGTCGGCTGGACCTGGAAAAGGCCTGGACCCTGAA +
Preference number: 3 (lower is better)
Translates to: GVCCVQEARGLG*SAGPGKGLDPE
Trigger: TTCAGGGTCCAGGCCTTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTGCACACAGCAGACACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR CAA 90 bp GGGGCAGTCAGGGCCCTGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGAAGGCCAGGCTGCCATaGGCAAAAGTCCTGGTAGGG +
Preference number: 3 (lower is better)
Translates to: GAVRALAQCGYLQPKQGTKARLP*AKVLVG
Trigger: CCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTT...CGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR CAA 90 bp GCTGGTCCAACTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCTGCTCAGGAGGCGAGGGGGTaGGGCTGGTCGGCTGGACCT +
Preference number: 3 (lower is better)
Translates to: AGPTGRRPVHIHRRWSAAQEARG*GWSAGP
Trigger: AGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTG...AGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGGACCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR GCA 72 bp AAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCC +
Preference number: 3 (lower is better)
Translates to: KTAGAYSSSMEC*SCIEGQSGPWP
Trigger: GGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR CCA 72 bp GAGTGCTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTaGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAA +
Preference number: 3 (lower is better)
Translates to: ECCSCIEGQSGP*PNVATSSPNRE
Trigger: TTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR GCA 72 bp TGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: WKTAGAYSSSME*CSCIEGQSGPW
Trigger: CCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR CCA 72 bp AGCACACTGGTCTGGGGGTCTCCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGG +
Preference number: 3 (lower is better)
Translates to: STLVWGSPGSRG*PLRFHRKARWG
Trigger: CCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGGAGACCCCCAGACCAGTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461597.1
3UTR CCA 72 bp CCAACTGGAAGACGGCCGGTGCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTGAGGGGCAGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: PTGRRPVHIHRR*SAAPALRGSQG
Trigger: GCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR CAA 90 bp TCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: SRAANQSECLSFRPASPIGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...GATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR CCA 72 bp AGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGG +
Preference number: 3 (lower is better)
Translates to: RPCLWGSPGSRG*PLRFHRKARWG
Trigger: CCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
3UTR TCA 72 bp AAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGTTTCGAGGCACAGCAA +
Preference number: 3 (lower is better)
Translates to: KQDGGVKGPAGT*CSNLQSFEAQQ
Trigger: TTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
3UTR TCA 72 bp GCAAAAGTCCTGGTAGGGTCGTTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTGGCAGGATCCAATGAA +
Preference number: 3 (lower is better)
Translates to: AKVLVGSFMGWP*NVALRVAGSNE
Trigger: TTCATTGGATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACCCCATGAACGACCCTACCAGGACTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR GCA 72 bp AAAGGCAAACAAGGGAGGGTAAAGAGGACCAACCTGTaGCCGACCCTCTTTTCCTTGCCACTCCCAGCCTTA +
Preference number: 3 (lower is better)
Translates to: KGKQGRVKRTNL*PTLFSLPLPAL
Trigger: TAAGGCTGGGAGTGGCAAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTTTACCCTCCCTTGTTTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
3UTR GCA 72 bp ATTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATaGCTCTCATTTAGGCCTGCAAGTCCCATCCAAGGG +
Preference number: 3 (lower is better)
Translates to: IFLPSRAANQSE*LSFRPASPIQG
Trigger: CCCTTGGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
3UTR CCA 72 bp AGAAGTTATTCTGGGACCCAAAGAAGGCTCGGACAATaGGTGACTGGGGAAGAGAGTATGCTAAGGCAGGAT +
Preference number: 3 (lower is better)
Translates to: RSYSGTQRRLGQ*VTGEESMLRQD
Trigger: ATCCTGCCTTAGCATACTCTCTTCCCCAGTCACCCATTGTCCGAGCCTTCTTTGGGTCCCAGAATAACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
3UTR-3UTR CAA 90 bp TCTTCTTCTTCTTCCTTCTTTCTTCTTTTCTTCTTTCTCCAAGAAAAGCACACTGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: SSSSSFFLLFFFLQEKHTGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...AGTGTGCTTTTCTTGGAGAAAGAAGAAAAGAAGAAAGAAGGAAGAAGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461597.1
CDS-3UTR TCA 90 bp GGTGTCTGCTGTGTGCAGGAGGCGAGGGGGTTGGGCTGGTCGGCTGGACCTGGACCACTGTGCAAAGCCTaGTGGGAGGGAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: GVCCVQEARGLGWSAGPGPLCKA*WEGAPQ
Trigger: CTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGG...TCCAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTGCACACAGCAGACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR TCA 90 bp GGTGTCTGCTGTGTGCAGGAGGCGAGGGGGTTGGGCTGGTCGGCTGGACCTGGAAGGGCCACCTCTAGCTaGCAGGTGTCTGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GVCCVQEARGLGWSAGPGRATSS*QVSAVC
Trigger: GCACACAGCAGACACCTGTCAGCTAGAGGTGGCCCT...TCCAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTGCACACAGCAGACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR GCA 90 bp TGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTCCCCGGGGAGAGGCCCCCAACCCCAGGTaGACTCCACAGAGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: WPNVATSSPNRERFPRGEAPNPR*TPQSRA
Trigger: TGCGCGGCTCTGTGGAGTGCACCTGGGGTTGGGGGC...CTCTCCCCGGGGAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GGGGCAGTCAGGGCCCTGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGCGAGGGGGTTGGGCTaGTCGGCTGGACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GAVRALAQCGYLQPKQGTARGLG*SAGPGK
Trigger: TTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGC...CGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAAGGAGGCGAGGGGGTTaGGCTGGTCGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: GSKPLVATVQSLMGGSPTRRRGG*AGRLDL
Trigger: CAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCT...TGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR TCA 90 bp GGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACGTGCTGCTCCTGCATTaGGGGGCAGTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GRHCAKPDGREPHSSWSNVLLLH*GAVRAL
Trigger: CAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCAC...GTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR TCA 90 bp GGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTGCTGCTCCTGCATTaGGGGGCAGTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSKPLVATVQSLMGGSPTVLLLH*GAVRAL
Trigger: CAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCAC...TGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR CCA 90 bp GGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACCCCAACCTCCTCACCTaGCGGGTCTTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRHCAKPDGREPHSSWSNPNLLT*RVFSPS
Trigger: GCTGGGGGAGAAGACCCGCCAGGTGAGGAGGTTGGG...GTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR TCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCGCAGGAGGCTCCAGTTaGCGCTCAGGGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGAGGSS*RSGCCG
Trigger: CCCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGC...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR GCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGGCCCCCAACCCCAGGTaGACTCCACAGAGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKAPNPR*TPQSRA
Trigger: TGCGCGGCTCTGTGGAGTGCACCTGGGGTTGGGGGC...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GGGGCAGTCAGGGCCCTGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGTCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GAVRALAQCGYLQPKQGTSSMEC*SCIEGQ
Trigger: CTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGA...CGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGGAGGCGAGGGGGTTaGGCTGGTCGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTARRRGG*AGRLDL
Trigger: CAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCT...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCGCAGGAGGCTCCAGTTaGCGCTCAGGGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QEGNTKGTLSIALSPARLAGGSS*RSGCCG
Trigger: CCCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGC...GAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR TCA 90 bp TCTGGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCAAAAGGCCTGGACCCTaGAGGCCAGGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: SGSKPLVATVQSLMGGSPKRPGP*RPGCHW
Trigger: CCAATGGCAGCCTGGCCTTCAGGGTCCAGGCCTTTT...GGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR TCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAGTGCTGCTCCTGCATTaGGGGGCAGTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPVLLLH*GAVRAL
Trigger: CAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCAC...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp CCTGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTCCCCGGGGAGGGCTCGGACAATGGGTaGCTGGGGAAGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: PGPMWLPPAQTGNGFPGEGSDNG*LGKRVC
Trigger: GCATACTCTCTTCCCCAGTCACCCATTGTCCGAGCC...CTCCCCGGGGAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR GCA 90 bp AGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAAGCCCCCAACCCCAGGTaGACTCCACAGAGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: SLMGGSPTVAGPTGKKGKAPNPR*TPQSRA
Trigger: TGCGCGGCTCTGTGGAGTGCACCTGGGGTTGGGGGC...TTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCAATAGCCCTGTCCCCTaGCCGCCTCCAAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGNSPVP*PPPKSP
Trigger: GGGGGACTTTGGAGGCGGGCAGGGGACAGGGCTATT...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAACGCTCAGGGTGCTGTaGGGGGTGTTGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARTLRVL*GVLVAT
Trigger: GGTGGCCACCAACACCCCCCACAGCACCCTGAGCGT...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAACGCTCAGGGTGCTGTaGGGGGTGTTGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQTLRVL*GVLVAT
Trigger: GGTGGCCACCAACACCCCCCACAGCACCCTGAGCGT...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR CCA 90 bp GGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTACGCTCAGGGTGCTGTaGGGGGTGTTGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: GNTKGTLSIALSPARLQSTLRVL*GVLVAT
Trigger: GGTGGCCACCAACACCCCCCACAGCACCCTGAGCGT...ACTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR CCA 90 bp GGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACGACCTGGAAAAGGCCTaGACCCTGAAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRHCAKPDGREPHSSWSNDLEKA*TLKARL
Trigger: CAGCCTGGCCTTCAGGGTCCAGGCCTTTTCCAGGTC...GTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR CCA 90 bp TCTGGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCGTTGGGCTGGTCGGCTaGACCTGGAAAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SGSKPLVATVQSLMGGSPVGLVG*TWKRPG
Trigger: TCCAGGCCTTTTCCAGGTCCAGCCGACCAGCCCAAC...GGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR CCA 90 bp GATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGAGGAGGCGAGGGGGTTaGGCTGGTCGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: DGREPHSSWSNWEERQTRRRRGG*AGRLDL
Trigger: CAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCT...CCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGAGGAGGCGAGGGGGTTaGGCTGGTCGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQRRRGG*AGRLDL
Trigger: CAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCT...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGCCGGGCAGTCAGGGCCCTaGCCCAATGTGGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: WQHSKTMSLGVSRKSRLAGQSGP*PNVATS
Trigger: GGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCC...GGCCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR TCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCAGGGCCACCTCTAGCTaGCAGGTGTCTGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGRATSS*QVSAVC
Trigger: GCACACAGCAGACACCTGTCAGCTAGAGGTGGCCCT...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCCGTGCTGCTCCTGCATTaGGGGGCAGTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGQPTSQNASHLGLQVPSVLLLH*GAVRAL
Trigger: CAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCAC...GGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGCCACTGTGCAAAGCCTaGTGGGAGGGAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKPLCKA*WEGAPQ
Trigger: CTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGG...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCACCACTGTGCAAAGCCTaGTGGGAGGGAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPPLCKA*WEGAPQ
Trigger: CTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGG...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCACTGTGCAAAGCCTaGTGGGAGGGAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPPLCKA*WEGAPQ
Trigger: CTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGG...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAAGCCCCCAACCCCAGGTaGACTCCACAGAGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSEAPNPR*TPQSRA
Trigger: TGCGCGGCTCTGTGGAGTGCACCTGGGGTTGGGGGC...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp CAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCGGCCACCATTACCACTaGCAGAGGCCCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QEGNTKGTLSIALSPARLGHHYH*QRPQAA
Trigger: AGCAGCCTGGGGCCTCTGGCAGTGGTAATGGTGGCC...GAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR GCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAGGCCACCATTACCACTaGCAGAGGCCCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTAGHHYH*QRPQAA
Trigger: AGCAGCCTGGGGCCTCTGGCAGTGGTAATGGTGGCC...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAACCCCTAGCCCCTGGATaGCCGGTTCCAGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSEPLAPG*PVPATL
Trigger: CAGGGTGGCTGGAACCGGGCATCCAGGGGCTAGGGG...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR CCA 90 bp CCAACAAAGTATGAAGGAAGCCCCACCTGGGGGTCTCCAGGAAGTCGAGGCTGGACCTCCAGAGACACCTaGCGGGTCTTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PTKYEGSPTWGSPGSRGWTSRDT*RVFSPS
Trigger: GCTGGGGGAGAAGACCCGCCAGGTGTCTCTGGAGGT...CCAGCCTCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTCATACTTTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000362007.6
ENST00000612353.4
CDS-3UTR CCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAACCTCCAGAGACACCTaGCGGGTCTTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRTSRDT*RVFSPS
Trigger: GCTGGGGGAGAAGACCCGCCAGGTGTCTCTGGAGGT...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTACGCTCAGGGTGCTGTaGGGGGTGTTGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFTLRVL*GVLVAT
Trigger: GGTGGCCACCAACACCCCCCACAGCACCCTGAGCGT...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CAGTCAGGGCCCTGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTGACCTGGAAAAGGCCTaGACCCTGAAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QSGPWPNVATSSPNRERFDLEKA*TLKARL
Trigger: CAGCCTGGCCTTCAGGGTCCAGGCCTTTTCCAGGTC...AAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGGGCCCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTGCGAGGGGGTTGGGCTaGTCGGCTGGACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GNTKGTLSIALSPARLQSARGLG*SAGPGK
Trigger: TTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGC...ACTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGGGAGGGTAAAGAGGACCAACCTGTGCCCGACCCTCTTTTCCTTGCCACTCCCGCGAGGGGGTTGGGCTaGTCGGCTGGACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: REGKEDQPVPDPLFLATPARGLG*SAGPGK
Trigger: TTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGC...GGGAGTGGCAAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTTTACCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAGCGAGGGGGTTGGGCTaGTCGGCTGGACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARARGLG*SAGPGK
Trigger: TTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGC...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCAAGGAGGCGAGGGGGTTaGGCTGGTCGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPRRRGG*AGRLDL
Trigger: CAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCT...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGGGCAGTCAGGGCCCTaGCCCAATGTGGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: DGREPHSSWSNWEERQTRGQSGP*PNVATS
Trigger: GGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCC...CCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTGGGCAGTCAGGGCCCTaGCCCAATGTGGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFGQSGP*PNVATS
Trigger: GGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCC...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTCCCCGGGGAGAGCTGGGAGTAAGCCACTaGTCGCCACTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: WPNVATSSPNRERFPRGELGVSH*SPLCKA
Trigger: GGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAG...CTCTCCCCGGGGAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GGTGTCTGCTGTGTGCAGGAGGCGAGGGGGTTGGGCTGGTCGGCTGGACCTGGACGGACAATGGGTGACTaGGGAAGAGAGTATGCTAAG +
Preference number: 4 (lower is better)
Translates to: GVCCVQEARGLGWSAGPGRTMGD*GREYAK
Trigger: CTTAGCATACTCTCTTCCCCAGTCACCCATTGTCCG...TCCAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTGCACACAGCAGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAGGACAAGCCGTCCACTaGAGGGAAGCCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARGQAVH*REAHTQ
Trigger: CTGGGTGTGGGCTTCCCTCCAGTGGACGGCTTGTCC...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCGAAGGAAGCCCCACCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGEGSPT*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTC...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACATCAAACTCAAGCAGCTaGCGGGTCTTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GSKPLVATVQSLMGGSPTSNSSS*RVFSPS
Trigger: GCTGGGGGAGAAGACCCGCCAGCTGCTTGAGTTTGA...TGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR TCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACCCACTGCCCGTATATaGAGCAGGTTCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARPTARI*SRFCRG
Trigger: CCCCCTGCAGAACCTGCTTCATATACGGGCAGTGGG...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR TCA 90 bp TCTGGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCTTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGSKPLVATVQSLMGGSPFMGWP*NVALRV
Trigger: CACCCTGAGTGCCACATTTCAAGGCCACCCCATGAA...GGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR TCA 90 bp GGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTAAAAGGCCTGGACCCTaGAGGCCAGGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: GNTKGTLSIALSPARLQSKRPGP*RPGCHW
Trigger: CCAATGGCAGCCTGGCCTTCAGGGTCCAGGCCTTTT...ACTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGAAAAGGCCTGGACCCTaGAGGCCAGGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKKRPGP*RPGCHW
Trigger: CCAATGGCAGCCTGGCCTTCAGGGTCCAGGCCTTTT...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp AGGGAGGGTAAAGAGGACCAACCTGTGCCCGACCCTCTTTTCCTTGCCACTCCCAGGGCCACCTCTAGCTaGCAGGTGTCTGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: REGKEDQPVPDPLFLATPRATSS*QVSAVC
Trigger: GCACACAGCAGACACCTGTCAGCTAGAGGTGGCCCT...GGGAGTGGCAAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTTTACCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR TCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGAGGGCCACCTCTAGCTaGCAGGTGTCTGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKRATSS*QVSAVC
Trigger: GCACACAGCAGACACCTGTCAGCTAGAGGTGGCCCT...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCAGTGCTGCTCCTGCATTaGGGGGCAGTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPVLLLH*GAVRAL
Trigger: CAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCAC...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTAGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTASKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: QEGNTKGTLSIALSPARLSKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...GAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCACCGTCCCATGACCCATaGCCATCTCCCACACCCTCC +
Preference number: 4 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPPSHDP*PSPTPS
Trigger: GGAGGGTGTGGGAGATGGTCATGGGTCATGGGACGG...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR CCA 90 bp TGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTCCCCGGGGAGAGGGTGGCCTTGAAATGTaGCACTCAGGGTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: WPNVATSSPNRERFPRGEGGLEM*HSGWQD
Trigger: ATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACC...CTCTCCCCGGGGAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAGACCTGGAAAAGGCCTaGACCCTGAAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPDLEKA*TLKARL
Trigger: CAGCCTGGCCTTCAGGGTCCAGGCCTTTTCCAGGTC...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAGACCTGGAAAAGGCCTaGACCCTGAAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQDLEKA*TLKARL
Trigger: CAGCCTGGCCTTCAGGGTCCAGGCCTTTTCCAGGTC...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGCGAGGGGGTTGGGCTaGTCGGCTGGACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSARGLG*SAGPGK
Trigger: TTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGC...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGCGAGGGGGTTGGGCTaGTCGGCTGGACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQARGLG*SAGPGK
Trigger: TTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGC...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCGGGCAGTCAGGGCCCTaGCCCAATGTGGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVGQSGP*PNVATS
Trigger: GGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCC...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp CCTGAAGGCCAGGCTGCCATTGGCAAAAGTCCTGGTAGGGTCGTTCATGGGGTGGAGCCCCACAGTAGCTaGTCCAACTGGAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: PEGQAAIGKSPGRVVHGVEPHSS*SNWKTA
Trigger: GGCCGTCTTCCAGTTGGACCAGCTACTGTGGGGCTC...CACCCCATGAACGACCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAGAAGGAAGCCCCACCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQEGSPT*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTC...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAGAAGGAAGCCCCACCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTAREGSPT*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTC...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCACCCACTGCCCGTATATaGAGCAGGTTCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPPTARI*SRFCRG
Trigger: CCCCCTGCAGAACCTGCTTCATATACGGGCAGTGGG...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GCGGATCATCAGGTCAGGAGATTGAGACCATCTCGGGTGAAACCCCATCTCTACGCAGGAGGCTCCAGTTaGCGCTCAGGGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ADHQVRRLRPSRVKPHLYAGGSS*RSGCCG
Trigger: CCCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGC...GTAGAGATGGGGTTTCACCCGAGATGGTCTCAATCTCCTGACCTGATGATCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR TCA 90 bp GGCGGATCATCAGGTCAGGAGATTGAGACCATCTCGGGTGAAACCCCATCTCTAGCAGGAGGCTCCAGTTaGCGCTCAGGGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GGSSGQEIETISGETPSLAGGSS*RSGCCG
Trigger: CCCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGC...TAGAGATGGGGTTTCACCCGAGATGGTCTCAATCTCCTGACCTGATGATCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR TCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCTTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGFMGWP*NVALRV
Trigger: CACCCTGAGTGCCACATTTCAAGGCCACCCCATGAA...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp AGCTGGTCCAACTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCTGCAAAAGGCCTGGACCCTaGAGGCCAGGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: SWSNWKTAGAYSSSMECCKRPGP*RPGCHW
Trigger: CCAATGGCAGCCTGGCCTTCAGGGTCCAGGCCTTTT...GCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGGACCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR TCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGAAAAGGCCTGGACCCTaGAGGCCAGGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQKRPGP*RPGCHW
Trigger: CCAATGGCAGCCTGGCCTTCAGGGTCCAGGCCTTTT...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp ACTGGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGAAAAGGCCTGGACCCTaGAGGCCAGGCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: TGNIARPCLWGSPGSRGWKRPGP*RPGCHW
Trigger: CCAATGGCAGCCTGGCCTTCAGGGTCCAGGCCTTTT...CCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR TCA 90 bp AGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAAGGGCCACCTCTAGCTaGCAGGTGTCTGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SEGAGWNLMLQPPEFRGTRATSS*QVSAVC
Trigger: GCACACAGCAGACACCTGTCAGCTAGAGGTGGCCCT...TGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAACCACTGTGCAAAGCCTaGTGGGAGGGAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: LMGGSPTVAGPTGKKGKQPLCKA*WEGAPQ
Trigger: CTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGG...TTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR TCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAGGCTCGGACAATGGGTaGCTGGGGAAGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARGSDNG*LGKRVC
Trigger: GCATACTCTCTTCCCCAGTCACCCATTGTCCGAGCC...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp ACTGGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: TGNIARPCLWGSPGSRGWGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...CCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR TCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQSKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFSKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp AGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: SEGAGWNLMLQPPEFRGTSKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...TGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGGCCCCCAACCCCAGGTaGACTCCACAGAGCCGCGCA +
Preference number: 4 (lower is better)
Translates to: FSCLPGQPTSQNASHLGLAPNPR*TPQSRA
Trigger: TGCGCGGCTCTGTGGAGTGCACCTGGGGTTGGGGGC...CAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACATCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGT +
Preference number: 4 (lower is better)
Translates to: GSKPLVATVQSLMGGSPTSQRLC*RIGHVG
Trigger: ACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGA...TGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAATGGAGTGCTGCTCCTaGATTGAGGGGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARMECCS*IEGQSG
Trigger: CCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCAT...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTATGGAGTGCTGCTCCTaGATTGAGGGGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPMECCS*IEGQSG
Trigger: CCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCAT...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAATGGAGTGCTGCTCCTaGATTGAGGGGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRMECCS*IEGQSG
Trigger: CCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCAT...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKSSMEC*SCIEGQ
Trigger: CTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGA...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGATCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRSSMEC*SCIEGQ
Trigger: CTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGA...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCATCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPSSMEC*SCIEGQ
Trigger: CTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGA...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GGCCAGGCTGCCATTGGCAAAAGTCCTGGTAGGGTCGTTCATGGGGTGGCCTTGTCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GQAAIGKSPGRVVHGVALSSSME*CSCIEG
Trigger: CCCCTCAATGCAGGAGCAGCACTCCATCGACGATGA...CAAGGCCACCCCATGAACGACCCTACCAGGACTTTTGCCAATGGCAGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR GCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCTCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGSSSME*CSCIEG
Trigger: CCCCTCAATGCAGGAGCAGCACTCCATCGACGATGA...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCAATAGCCCTGTCCCCTaGCCGCCTCCAAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVNSPVP*PPPKSP
Trigger: GGGGGACTTTGGAGGCGGGCAGGGGACAGGGCTATT...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp ACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAAGAGGACCAACCTGTaGCCGACCCTCTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TGRHCAKPDGREPHSSWSKRTNL*PTLFSL
Trigger: CAAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTT...GGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp CTGTGTGCAGGAGGCGAGGGGGTTGGGCTGGTCGGCTGGACCTGGAAAAGGCCTATCGGCCAAGGAGTATaGAGGATATGGTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LCAGGEGVGLVGWTWKRPIGQGV*RIWSSQ
Trigger: TTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT...AGGCCTTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTGCACACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCAGGAGGCGAGGGGGTTaGGCTGGTCGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSRRRGG*AGRLDL
Trigger: CAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCT...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGAGGAGGCGAGGGGGTTaGGCTGGTCGGCTGGACCTG +
Preference number: 4 (lower is better)
Translates to: FSCLPGQPTSQNASHLGLRRRGG*AGRLDL
Trigger: CAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCT...CAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGGCACAGAAGTTATTCTGGGACCCAAAGAAGGCTCGGACAATGGGTGACTGGGGGGCAGTCAGGGCCCTaGCCCAATGTGGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: RHRSYSGTQRRLGQWVTGGQSGP*PNVATS
Trigger: GGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCC...CCCAGTCACCCATTGTCCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGAGCCCCACAGTAGCTaGTCCAACTGGAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQEPHSS*SNWKTA
Trigger: GGCCGTCTTCCAGTTGGACCAGCTACTGTGGGGCTC...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACTGGGAGTAAGCCACTaGTCGCCACTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARLGVSH*SPLCKA
Trigger: GGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAG...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCAGGACAAGCCGTCCACTaGAGGGAAGCCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPGQAVH*REAHTQ
Trigger: CTGGGTGTGGGCTTCCCTCCAGTGGACGGCTTGTCC...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGCCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKPGSRG*PLRFHR
Trigger: TCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARPGSRG*PLRFHR
Trigger: TCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPPGSRG*PLRFHR
Trigger: TCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCACCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPPGSRG*PLRFHR
Trigger: TCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGAAGGAAGCCCCACCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQEGSPT*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTC...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GTGTCTGCTGTGTGCAGGAGGCGAGGGGGTTGGGCTGGTCGGCTGGACCTGGAAGTTCCACCCTCTAATTaGGATGAACTCTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSAVCRRRGGWAGRLDLEVPPSN*DELSPL
Trigger: CAGAGGAGAGAGTTCATCCCAATTAGAGGGTGGAAC...TTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTGCACACAGCAGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp TCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCACCTCCAGAGACACCTaGACCTGGGTCACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SRAANQSECLSFRPASPITSRDT*TWVTQG
Trigger: GCCCTGGGTGACCCAGGTCCAGGTGTCTCTGGAGGT...GATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR TCA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCCACTGCCCGTATATaGAGCAGGTTCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVPTARI*SRFCRG
Trigger: CCCCCTGCAGAACCTGCTTCATATACGGGCAGTGGG...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR TCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAACCCACTGCCCGTATATaGAGCAGGTTCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSEPTARI*SRFCRG
Trigger: CCCCCTGCAGAACCTGCTTCATATACGGGCAGTGGG...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CCTGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTCCCCGGGGAGGGTGGCAGGATCCAATaGATCAGTGATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PGPMWLPPAQTGNGFPGEGGRIQ*ISDVVP
Trigger: TGGAACAACATCACTGATTCATTGGATCCTGCCACC...CTCCCCGGGGAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR TCA 90 bp AGGGAGGGTAAAGAGGACCAACCTGTGCCCGACCCTCTTTTCCTTGCCACTCCCTTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: REGKEDQPVPDPLFLATPFMGWP*NVALRV
Trigger: CACCCTGAGTGCCACATTTCAAGGCCACCCCATGAA...GGGAGTGGCAAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTTTACCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR TCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAAAGGGCCACCTCTAGCTaGCAGGTGTCTGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSERATSS*QVSAVC
Trigger: GCACACAGCAGACACCTGTCAGCTAGAGGTGGCCCT...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GGCGGATCATCAGGTCAGGAGATTGAGACCATCTCGGGTGAAACCCCATCTCTACCACTGTGCAAAGCCTaGTGGGAGGGAGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: GGSSGQEIETISGETPSLPLCKA*WEGAPQ
Trigger: CTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGG...TAGAGATGGGGTTTCACCCGAGATGGTCTCAATCTCCTGACCTGATGATCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR TCA 90 bp CCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCCGGCTCGGACAATGGGTaGCTGGGGAAGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: PGQPTSQNASHLGLQVPSGSDNG*LGKRVC
Trigger: GCATACTCTCTTCCCCAGTCACCCATTGTCCGAGCC...GGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTGGCTCGGACAATGGGTaGCTGGGGAAGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFGSDNG*LGKRVC
Trigger: GCATACTCTCTTCCCCAGTCACCCATTGTCCGAGCC...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTGGAGCATCGACCAGCTaGGGTAGTGTTGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: GNTKGTLSIALSPARLQSGASTS*GSVGPN
Trigger: ATTGGGACCAACACTACCTCAGCTGGTCGATGCTCC...ACTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGGGAGCATCGACCAGCTaGGGTAGTGTTGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKGASTS*GSVGPN
Trigger: ATTGGGACCAACACTACCTCAGCTGGTCGATGCTCC...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAAGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSEGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCAAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPSKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGCCTGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: GNIARPCLWGSPGSRGWPVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...AGGCCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR TCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: QEGNTKGTLSIALSPARLVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...GAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp AGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACACACAATCCCGTCCCATaGCCCATGACCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SEGAGWNLMLQPPEFRGTHNPVP*PMTISH
Trigger: GTGGGAGATGGTCATGGGTCATGGGACGGGATTGTG...TGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR GCA 90 bp TCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGGCCACCATTACCACTaGCAGAGGCCCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCLPGQPTSQNASHLGLQGHHYH*QRPQAA
Trigger: AGCAGCCTGGGGCCTCTGGCAGTGGTAATGGTGGCC...TTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR GCA 90 bp GCGGATCATCAGGTCAGGAGATTGAGACCATCTCGGGTGAAACCCCATCTCTACGGCCACCATTACCACTaGCAGAGGCCCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ADHQVRRLRPSRVKPHLYGHHYH*QRPQAA
Trigger: AGCAGCCTGGGGCCTCTGGCAGTGGTAATGGTGGCC...GTAGAGATGGGGTTTCACCCGAGATGGTCTCAATCTCCTGACCTGATGATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR GCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGATGGAGTGCTGCTCCTaGATTGAGGGGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQMECCS*IEGQSG
Trigger: CCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCAT...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp ATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGTCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MGGSPTVAGPTGKKGKQGSSMEC*SCIEGQ
Trigger: CTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGA...CCCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGATCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARSSSME*CSCIEG
Trigger: CCCCTCAATGCAGGAGCAGCACTCCATCGACGATGA...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGACTGGAAGACGGCCGGTaGATATTCATCGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: ATVQSLMGGSPTVAGPTGLEDGR*IFIVDG
Trigger: TCCATCGACGATGAATATGCACCGGCCGTCTTCCAG...TCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR GCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCCTGGAAGACGGCCGGTaGATATTCATCGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGLEDGR*IFIVDG
Trigger: TCCATCGACGATGAATATGCACCGGCCGTCTTCCAG...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACCGACCCTCTTTTCCTTaGCACTCCCAGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: GRHCAKPDGREPHSSWSNRPSFP*HSQPYS
Trigger: AGAATAAGGCTGGGAGTGGCAAGGAAAAGAGGGTCG...GTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp GCGGATCATCAGGTCAGGAGATTGAGACCATCTCGGGTGAAACCCCATCTCTACCCGGGAGGCGGAGGTTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: ADHQVRRLRPSRVKPHLYPGGGG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAACCTCCGCCTCCCGG...GTAGAGATGGGGTTTCACCCGAGATGGTCTCAATCTCCTGACCTGATGATCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR CCA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAACGCTCAGGGTGCTGTaGGGGGTGTTGGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRTLRVL*GVLVAT
Trigger: GGTGGCCACCAACACCCCCCACAGCACCCTGAGCGT...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000614643.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAGGTGGCCTTGAAATGTaGCACTCAGGGTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARGGLEM*HSGWQD
Trigger: ATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACC...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTGGTGGCCTTGAAATGTaGCACTCAGGGTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GNTKGTLSIALSPARLQSGGLEM*HSGWQD
Trigger: ATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACC...ACTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TGGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGCCGGTGGCCTTGAAATGTaGCACTCAGGGTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: WQHSKTMSLGVSRKSRLAGGLEM*HSGWQD
Trigger: ATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACC...GGCCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR CCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGGGCAGTCAGGGCCCTaGCCCAATGTGGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSGQSGP*PNVATS
Trigger: GGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCC...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGGGCAGTCAGGGCCCTaGCCCAATGTGGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRGQSGP*PNVATS
Trigger: GGAGGTAGCCACATTGGGCCAGGGCCCTGACTGCCC...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AGTCAGGGCCCTGGCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTCAGTAGCTGGTCCAACTaGAAGACGGCCGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: SQGPGPMWLPPAQTGNGFSSWSN*KTAGAY
Trigger: ATATGCACCGGCCGTCTTCCAGTTGGACCAGCTACT...GAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGCCAGGGCCCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCAGAGCCCCACAGTAGCTaGTCCAACTGGAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPEPHSS*SNWKTA
Trigger: GGCCGTCTTCCAGTTGGACCAGCTACTGTGGGGCTC...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAAATAGCCAGGGCCTGTaGAAGCCCCGAACGTCAGAT +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRNSQGL*KPRTSD
Trigger: ATCTGACGTTCGGGGCTTCCACAGGCCCTGGCTATT...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTASEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARSEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKSEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCACCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPPGSRG*PLRFHR
Trigger: TCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAAGAAGGCTCGGACAATaGGTGACTGGAAGACGGCCG +
Preference number: 4 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPRRLGQ*VTGRRP
Trigger: CGGCCGTCTTCCAGTCACCCATTGTCCGAGCCTTCT...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481050.1
CDS-3UTR CCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGCCAGGAGCATCGACCTaGAAGACGGCCGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQPGAST*KTAGAY
Trigger: ATATGCACCGGCCGTCTTCCAGGTCGATGCTCCTGG...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612353.4
CDS-3UTR TCA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCGCAGGAGGCTCCAGTTaGCGCTCAGGGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: MCGDARRQHQGDLINSPVAGGSS*RSGCCG
Trigger: CCCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGC...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR TCA 90 bp TCTGGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCGGTGGCAGGATCCAATaGATCAGTGATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SGSKPLVATVQSLMGGSPGGRIQ*ISDVVP
Trigger: TGGAACAACATCACTGATTCATTGGATCCTGCCACC...GGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR TCA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCGTGCTGCTCCTGCATTaGGGGGCAGTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: MCGDARRQHQGDLINSPVVLLLH*GAVRAL
Trigger: CAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCAC...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GCGGATCATCAGGTCAGGAGATTGAGACCATCTCGGGTGAAACCCCATCTCTACGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: ADHQVRRLRPSRVKPHLYGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...GTAGAGATGGGGTTTCACCCGAGATGGTCTCAATCTCCTGACCTGATGATCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR TCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp AGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SEGAGWNLMLQPPEFRGTVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...TGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp ATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGCCCAGCCTTATTCTGTaGCTAGCAGCAGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: MGGSPTVAGPTGKKGKQGPSLIL*LAAGVL
Trigger: CAGGACTCCTGCTGCTAGTCACAGAATAAGGCTGGG...CCCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCGGAATTGGTGCCCACTaGCCGTATATGAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGGIGAH*PYMKQV
Trigger: AACCTGCTTCATATACGGGCAGTGGGCACCAATTCC...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGATCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGT +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARSQRLC*RIGHVG
Trigger: ACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGA...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp AGTAGCTGGTCCAACTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCATGGAGTGCTGCTCCTaGATTGAGGGGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSWSNWKTAGAYSSSMECMECCS*IEGQSG
Trigger: CCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCAT...GCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGGACCAGCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR GCA 90 bp AGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAATCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLMGGSPTVAGPTGKKGKSSSME*CSCIEG
Trigger: CCCCTCAATGCAGGAGCAGCACTCCATCGACGATGA...TTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCACTGGAAGACGGCCGGTaGATATTCATCGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTALEDGR*IFIVDG
Trigger: TCCATCGACGATGAATATGCACCGGCCGTCTTCCAG...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAACTGGAAGACGGCCGGTaGATATTCATCGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQLEDGR*IFIVDG
Trigger: TCCATCGACGATGAATATGCACCGGCCGTCTTCCAG...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGACTGGAAGACGGCCGGTaGATATTCATCGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRLEDGR*IFIVDG
Trigger: TCCATCGACGATGAATATGCACCGGCCGTCTTCCAG...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAGAGTACTTCTTGTGGTaGAGCAGCAGAACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQEYFLW*SSRTKP
Trigger: CGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTC...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAGAGTACTTCTTGTGGTaGAGCAGCAGAACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTAREYFLW*SSRTKP
Trigger: CGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTC...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTAATAGCCCTGTCCCCTaGCCGCCTCCAAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPNSPVP*PPPKSP
Trigger: GGGGGACTTTGGAGGCGGGCAGGGGACAGGGCTATT...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCAATAGCCCTGTCCCCTaGCCGCCTCCAAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSNSPVP*PPPKSP
Trigger: GGGGGACTTTGGAGGCGGGCAGGGGACAGGGCTATT...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACATATCGGACACGTTGGTaGTGTCAAACTCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSKPLVATVQSLMGGSPTYRTRW*CQTQAA
Trigger: AGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATA...TGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp TCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGCCGGGAGGCGGAGGTTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: SRVSRHSKTGSVMSFPPEPGGGG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAACCTCCGCCTCCCGG...CTCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR CCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCACCTCCAGAGACACCTaGCGGGTCTTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSTSRDT*RVFSPS
Trigger: GCTGGGGGAGAAGACCCGCCAGGTGTCTCTGGAGGT...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000647767.1
CDS-3UTR CCA 90 bp GATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGGTGGCCTTGAAATGTaGCACTCAGGGTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: DGREPHSSWSNWEERQTRGGLEM*HSGWQD
Trigger: ATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACC...CCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp GACCCAAAGAAGGCTCGGACAATGGGTGACTGGGGAAGAGAGTATGCTAAGGCAGTTGGGCTGGTCGGCTaGACCTGGAAAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: DPKKARTMGDWGREYAKAVGLVG*TWKRPG
Trigger: TCCAGGCCTTTTCCAGGTCCAGCCGACCAGCCCAAC...TGCCTTAGCATACTCTCTTCCCCAGTCACCCATTGTCCGAGCCTTCTTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GGCGGATCATCAGGTCAGGAGATTGAGACCATCTCGGGTGAAACCCCATCTCTAGTTGGGCTGGTCGGCTaGACCTGGAAAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GGSSGQEIETISGETPSLVGLVG*TWKRPG
Trigger: TCCAGGCCTTTTCCAGGTCCAGCCGACCAGCCCAAC...TAGAGATGGGGTTTCACCCGAGATGGTCTCAATCTCCTGACCTGATGATCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR CCA 90 bp TCTGGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: SGSKPLVATVQSLMGGSPHIHRR*SAAPAL
Trigger: CAATGCAGGAGCAGCACTCCATCGACGATGAATATG...GGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR CCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCGCACAGAAGTTATTCTaGGACCCAAAGAAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGAQKLF*DPKKAR
Trigger: CCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGC...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTAATAGCCAGGGCCTGTaGAAGCCCCGAACGTCAGAT +
Preference number: 4 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSNSQGL*KPRTSD
Trigger: ATCTGACGTTCGGGGCTTCCACAGGCCCTGGCTATT...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGGACAAGCCGTCCACTaGAGGGAAGCCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSGQAVH*REAHTQ
Trigger: CTGGGTGTGGGCTTCCCTCCAGTGGACGGCTTGTCC...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCGGACAAGCCGTCCACTaGAGGGAAGCCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSGQAVH*REAHTQ
Trigger: CTGGGTGTGGGCTTCCCTCCAGTGGACGGCTTGTCC...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACCAAGAAAAGCACACTaGTCTGGGGGTCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARPRKAH*SGGLQE
Trigger: TTCCTGGAGACCCCCAGACCAGTGTGCTTTTCTTGG...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461597.1
CDS-3UTR CCA 90 bp ACTGGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGGCAAGACCATGTCTCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: TGNIARPCLWGSPGSRGWARPCL*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGC...CCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR CCA 90 bp TGGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGCCTGGGGGAGAATAGGGTaGGAATCGGTAAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: WQHSKTMSLGVSRKSRLAWGRIG*ESVKGG
Trigger: TCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCA...GGCCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
3UTR CAA 72 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: KARWGSEGAGWN*MLQPPEFRGTA
Trigger: TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPFMGWP*NVALRV
Trigger: CACCCTGAGTGCCACATTTCAAGGCCACCCCATGAA...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAAGGGCCACCTCTAGCTaGCAGGTGTCTGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSRATSS*QVSAVC
Trigger: GCACACAGCAGACACCTGTCAGCTAGAGGTGGCCCT...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTGGGCCGGCTGGAACTTaGTGCTCCAACCTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPGPAGT*CSNLQS
Trigger: ACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCC...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPSKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCAGCAAGATGGGGGAGTaGAGGGGCCGGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSSKMGE*RGRLEL
Trigger: AAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCT...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCTGGGTCACCCAGGGCTaGGTCGGGGTCCAGACATCA +
Preference number: 4 (lower is better)
Translates to: MCGDARRQHQGDLINSPVWVTQG*VGVQTS
Trigger: TGATGTCTGGACCCCGACTCAGCCCTGGGTGACCCA...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR GCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAGGAATTGGTGCCCACTaGCCGTATATGAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTAGIGAH*PYMKQV
Trigger: AACCTGCTTCATATACGGGCAGTGGGCACCAATTCC...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR GCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGGCAGTGTGGAATTGGTaGCCACTGCCCGTATATGAA +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKAVWNW*PLPVYE
Trigger: TTCATATACGGGCAGTGGGCACCAATTCCACACTGC...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR GCA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTGCAGTGTGGAATTGGTaGCCACTGCCCGTATATGAA +
Preference number: 4 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPAVWNW*PLPVYE
Trigger: TTCATATACGGGCAGTGGGCACCAATTCCACACTGC...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR GCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCATATCGGACACGTTGGTaGTGTCAAACTCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPYRTRW*CQTQAA
Trigger: GGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATA...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR GCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTTCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGT +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFSQRLC*RIGHVG
Trigger: ACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGA...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAATCTTCCCAAAGGCTTTaGTGCCGTATCGGACACGTT +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQSSQRL*CRIGHV
Trigger: AACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGA...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTTCTTCCCAAAGGCTTTaGTGCCGTATCGGACACGTT +
Preference number: 4 (lower is better)
Translates to: GNTKGTLSIALSPARLQSSSQRL*CRIGHV
Trigger: AACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGA...ACTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGAGGGTAAAATGGAGTGCTGCTCCTaGATTGAGGGGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: EPHSSWSNWEERQTREGKMECCS*IEGQSG
Trigger: CCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCAT...TTTACCCTCCCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCTCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVSSSME*CSCIEG
Trigger: CCCCTCAATGCAGGAGCAGCACTCCATCGACGATGA...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCACTGGAAGACGGCCGGTaGATATTCATCGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPLEDGR*IFIVDG
Trigger: TCCATCGACGATGAATATGCACCGGCCGTCTTCCAG...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp ATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGCTGGAAGACGGCCGGTaGATATTCATCGTCGATGGA +
Preference number: 4 (lower is better)
Translates to: MGGSPTVAGPTGKKGKQGLEDGR*IFIVDG
Trigger: TCCATCGACGATGAATATGCACCGGCCGTCTTCCAG...CCCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTGAGTACTTCTTGTGGTaGAGCAGCAGAACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFEYFLW*SSRTKP
Trigger: CGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTC...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAGTACTTCTTGTGGTaGAGCAGCAGAACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSEYFLW*SSRTKP
Trigger: CGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTC...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTAATAGCCCTGTCCCCTaGCCGCCTCCAAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLNSPVP*PPPKSP
Trigger: GGGGGACTTTGGAGGCGGGCAGGGGACAGGGCTATT...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp CAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCGCCAACCAGTCAGAATaGCTCTCATTTAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QEGNTKGTLSIALSPARLANQSE*LSFRPA
Trigger: TGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGC...GAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCGTATCGGACACGTTaGTGCTGTCAAACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPPYRTR*CCQTQA
Trigger: TGCTTGAGTTTGACAGCACCAACGTGTCCGATACGG...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAACCGTATCGGACACGTTaGTGCTGTCAAACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQPYRTR*CCQTQA
Trigger: TGCTTGAGTTTGACAGCACCAACGTGTCCGATACGG...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp CCAACAAAGTATGAAGGAAGCCCCACCTGGGGGTCTCCAGGAAGTCGAGGCTGGATGTGGCACTCAGGGTaGCAGGATCCAATGAATCAG +
Preference number: 4 (lower is better)
Translates to: PTKYEGSPTWGSPGSRGWMWHSG*QDPMNQ
Trigger: CTGATTCATTGGATCCTGCCACCCTGAGTGCCACAT...CCAGCCTCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTCATACTTTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAATGTGGCACTCAGGGTaGCAGGATCCAATGAATCAG +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRMWHSG*QDPMNQ
Trigger: CTGATTCATTGGATCCTGCCACCCTGAGTGCCACAT...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCAGGTGGCCTTGAAATGTaGCACTCAGGGTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPGGLEM*HSGWQD
Trigger: ATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACC...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGACCTGGAAAAGGCCTaGACCCTGAAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRDLEKA*TLKARL
Trigger: CAGCCTGGCCTTCAGGGTCCAGGCCTTTTCCAGGTC...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGGTTGGGCTGGTCGGCTaGACCTGGAAAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SRVSRHSKTGSVMSFPPEVGLVG*TWKRPG
Trigger: TCCAGGCCTTTTCCAGGTCCAGCCGACCAGCCCAAC...CTCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGGTTGGGCTGGTCGGCTaGACCTGGAAAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FSCLPGQPTSQNASHLGLVGLVG*TWKRPG
Trigger: TCCAGGCCTTTTCCAGGTCCAGCCGACCAGCCCAAC...CAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTGCGAGGGGGTTGGGCTaGTCGGCTGGACCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLARGLG*SAGPGK
Trigger: TTTTCCAGGTCCAGCCGACCAGCCCAACCCCCTCGC...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTAGTAGCTGGTCCAACTaGAAGACGGCCGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSSSWSN*KTAGAY
Trigger: ATATGCACCGGCCGTCTTCCAGTTGGACCAGCTACT...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCGAGCCCCACAGTAGCTaGTCCAACTGGAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSEPHSS*SNWKTA
Trigger: GGCCGTCTTCCAGTTGGACCAGCTACTGTGGGGCTC...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTGAGCCCCACAGTAGCTaGTCCAACTGGAAGACGGCC +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPEPHSS*SNWKTA
Trigger: GGCCGTCTTCCAGTTGGACCAGCTACTGTGGGGCTC...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AAACAAGGGAGGGTAAAGAGGACCAACCTGTGCCCGACCCTCTTTTCCTTGCCACTGGGAGTAAGCCACTaGTCGCCACTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KQGRVKRTNLCPTLFSLPLGVSH*SPLCKA
Trigger: GGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAG...TGGCAAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTTTACCCTCCCTTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp GGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTCGGACAATGGGTGACTaGGGAAGAGAGTATGCTAAG +
Preference number: 4 (lower is better)
Translates to: GNTKGTLSIALSPARLQSRTMGD*GREYAK
Trigger: CTTAGCATACTCTCTTCCCCAGTCACCCATTGTCCG...ACTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAAAATAGCCAGGGCCTGTaGAAGCCCCGAACGTCAGAT +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSENSQGL*KPRTSD
Trigger: ATCTGACGTTCGGGGCTTCCACAGGCCCTGGCTATT...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTGGACAAGCCGTCCACTaGAGGGAAGCCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLGQAVH*REAHTQ
Trigger: CTGGGTGTGGGCTTCCCTCCAGTGGACGGCTTGTCC...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCGGACAAGCCGTCCACTaGAGGGAAGCCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: MCGDARRQHQGDLINSPVGQAVH*REAHTQ
Trigger: CTGGGTGTGGGCTTCCCTCCAGTGGACGGCTTGTCC...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCGAAGGAAGCCCCACCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSEGSPT*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTC...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAATCAAACTCAAGCAGCTaGCGGGTCTTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SCLPGQPTSQNASHLGLQSNSSS*RVFSPS
Trigger: GCTGGGGGAGAAGACCCGCCAGCTGCTTGAGTTTGA...TTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622703.4
CDS-3UTR CCA 90 bp ACAAGGGAGGGTAAAGAGGACCAACCTGTGCCCGACCCTCTTTTCCTTGCCACTCCTCAATCCCTCCTCTaGAAGACGGCCGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: TREGKEDQPVPDPLFLATPQSLL*KTAGAY
Trigger: ATATGCACCGGCCGTCTTCCAGAGGAGGGATTGAGG...AGTGGCAAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTTTACCCTCCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTAAAAGCACACTGGTCTaGGGGTCTCCAGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSKSTLV*GSPGSR
Trigger: TCGACTTCCTGGAGACCCCCAGACCAGTGTGCTTTT...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000461597.1
CDS-3UTR CCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCAGTTTGAGCCCAGACTaGCAACATAGCAAGACCATG +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGSLSPD*QHSKTM
Trigger: CATGGTCTTGCTATGTTGCCAGTCTGGGCTCAAACT...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR CCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGTGGGGGAGAATAGGGTaGGAATCGGTAAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQWGRIG*ESVKGG
Trigger: TCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCA...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR CCA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCTCCACCCCTAGCCCCTaGATGCCCGGTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: REMCGDARRQHQGDLINSSTPSP*MPGSSH
Trigger: GTGGCTGGAACCGGGCATCCAGGGGCTAGGGGTGGA...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR TCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGTGGCAGGATCCAATaGATCAGTGATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRGGRIQ*ISDVVP
Trigger: TGGAACAACATCACTGATTCATTGGATCCTGCCACC...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGGGTGGCAGGATCCAATaGATCAGTGATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKGGRIQ*ISDVVP
Trigger: TGGAACAACATCACTGATTCATTGGATCCTGCCACC...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAGGTGGCAGGATCCAATaGATCAGTGATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTAGGRIQ*ISDVVP
Trigger: TGGAACAACATCACTGATTCATTGGATCCTGCCACC...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GGGTGGGGGAGAATAGGGTGGGAATCGGTAAAGGGAGGAAGATATTTTACTATAGTGCTGCTCCTGCATTaGGGGGCAGTCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GWGRIGWESVKGGRYFTIVLLLH*GAVRAL
Trigger: CAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCAC...TATAGTAAAATATCTTCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR TCA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGGCTCGGACAATGGGTaGCTGGGGAAGAGAGTATGC +
Preference number: 4 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRGSDNG*LGKRVC
Trigger: GCATACTCTCTTCCCCAGTCACCCATTGTCCGAGCC...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCACCCCGAACGTCAGATTaGAGGCACAGAAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTAPRTSD*RHRSYS
Trigger: AGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGG...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGACCCCGAACGTCAGATTaGAGGCACAGAAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRPRTSD*RHRSYS
Trigger: AGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGG...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCATATGGACTGGTACTCTaGGTACTTCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTAYGLVL*VLLVVQ
Trigger: CTGCACCACAAGAAGTACTCAGAGTACCAGTCCATA...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGATATGGACTGGTACTCTaGGTACTTCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRYGLVL*VLLVVQ
Trigger: CTGCACCACAAGAAGTACTCAGAGTACCAGTCCATA...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAATATGGACTGGTACTCTaGGTACTTCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQYGLVL*VLLVVQ
Trigger: CTGCACCACAAGAAGTACTCAGAGTACCAGTCCATA...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTTATGGACTGGTACTCTaGGTACTTCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPYGLVL*VLLVVQ
Trigger: CTGCACCACAAGAAGTACTCAGAGTACCAGTCCATA...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGATATGGACTGGTACTCTaGGTACTTCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARYGLVL*VLLVVQ
Trigger: CTGCACCACAAGAAGTACTCAGAGTACCAGTCCATA...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAAGGGTAGCGTTTCCTaGAACTTCTATCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTAKGSVS*NFYRCS
Trigger: GCTACAGCGATAGAAGTTTCAGGAAACGCTACCCTT...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR GCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTGCAGTGTGGAATTGGTaGCCACTGCCCGTATATGAA +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFAVWNW*PLPVYE
Trigger: TTCATATACGGGCAGTGGGCACCAATTCCACACTGC...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TCTATTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGGGCCACCATTACCACTaGCAGAGGCCCCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SIFLPSRAANQSECLSFRGHHYH*QRPQAA
Trigger: AGCAGCCTGGGGCCTCTGGCAGTGGTAATGGTGGCC...CCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR GCA 90 bp AGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACATCTTCCCAAAGGCTTTaGTGCCGTATCGGACACGTT +
Preference number: 4 (lower is better)
Translates to: SEGAGWNLMLQPPEFRGTSSQRL*CRIGHV
Trigger: AACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGA...TGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCATGGAGTGCTGCTCCTaGATTGAGGGGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSMECCS*IEGQSG
Trigger: CCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCAT...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTTCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPSSMEC*SCIEGQ
Trigger: CTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGA...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAATCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SCLPGQPTSQNASHLGLQSSSME*CSCIEG
Trigger: CCCCTCAATGCAGGAGCAGCACTCCATCGACGATGA...TTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGCCAACCAGTCAGAATaGCTCTCATTTAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQANQSE*LSFRPA
Trigger: TGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGC...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTAGTGCAGTGTGGAATTaGTGCCCACTGCCCGTATAT +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFSAVWN*CPLPVY
Trigger: ATATACGGGCAGTGGGCACCAATTCCACACTGCACT...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTGGAGTATGGAGGATATaGTCTTCCCAAAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPGVWRI*SSQRLC
Trigger: GCAAAGCCTTTGGGAAGACCATATCCTCCATACTCC...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAATCGGCCAAGGAGTATaGAGGATATGGTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQIGQGV*RIWSSQ
Trigger: TTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAATCGGCCAAGGAGTATaGAGGATATGGTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPIGQGV*RIWSSQ
Trigger: TTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAATGTGGCACTCAGGGTaGCAGGATCCAATGAATCAG +
Preference number: 4 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPMWHSG*QDPMNQ
Trigger: CTGATTCATTGGATCCTGCCACCCTGAGTGCCACAT...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTGTTGGGCTGGTCGGCTaGACCTGGAAAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLVGLVG*TWKRPG
Trigger: TCCAGGCCTTTTCCAGGTCCAGCCGACCAGCCCAAC...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAACATATTCATCGTCGATaGAGTGCTGCTCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: EGNTKGTLSIALSPARLQHIHRR*SAAPAL
Trigger: CAATGCAGGAGCAGCACTCCATCGACGATGAATATG...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCTGGGAGTAAGCCACTaGTCGCCACTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSLGVSH*SPLCKA
Trigger: GGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAG...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGGACAATGGGTGACTaGGGAAGAGAGTATGCTAAG +
Preference number: 4 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFRTMGD*GREYAK
Trigger: CTTAGCATACTCTCTTCCCCAGTCACCCATTGTCCG...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCCGCACAGAAGTTATTCTaGGACCCAAAGAAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PGQPTSQNASHLGLQVPSAQKLF*DPKKAR
Trigger: CCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGC...GGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGCTGGTCCAACTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCTGCGCACAGAAGTTATTCTaGGACCCAAAGAAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SWSNWKTAGAYSSSMECCAQKLF*DPKKAR
Trigger: CCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGC...GCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGGACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp CCAACAAAGTATGAAGGAAGCCCCACCTGGGGGTCTCCAGGAAGTCGAGGCTGGTCTGAGTACTTCTTGTaGTGCAGCAGCAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: PTKYEGSPTWGSPGSRGWSEYFL*CSSRTK
Trigger: CTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGA...CCAGCCTCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTCATACTTTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGATCTGAGTACTTCTTGTaGTGCAGCAGCAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRSEYFL*CSSRTK
Trigger: CTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGA...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCGCGGGCCTTAATTTATaGACTGGTACTCTGAGTACT +
Preference number: 4 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGAGLNL*TGTLST
Trigger: AGTACTCAGAGTACCAGTCCATAAATTAAGGCCCGC...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPPGSRG*PLRFHR
Trigger: TCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGAGGGTAAAGAGGGAGCCCCACAGTAGCTaGTCCAACTGGGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PTVAGPTGKKGKQGRVKREPHSS*SNWEER
Trigger: CCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTC...CCTCTTTACCCTCCCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR TCA 90 bp TCTATTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCCACTGCCCGTATATaGAGCAGGTTCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SIFLPSRAANQSECLSFRPTARI*SRFCRG
Trigger: CCCCCTGCAGAACCTGCTTCATATACGGGCAGTGGG...CCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR TCA 90 bp AGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGGTGGCAGGATCCAATaGATCAGTGATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SEGAGWNLMLQPPEFRGTGGRIQ*ISDVVP
Trigger: TGGAACAACATCACTGATTCATTGGATCCTGCCACC...TGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCATTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSFMGWP*NVALRV
Trigger: CACCCTGAGTGCCACATTTCAAGGCCACCCCATGAA...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCTTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSFMGWP*NVALRV
Trigger: CACCCTGAGTGCCACATTTCAAGGCCACCCCATGAA...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGGAGCATCGACCAGCTaGGGTAGTGTTGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSGASTS*GSVGPN
Trigger: ATTGGGACCAACACTACCTCAGCTGGTCGATGCTCC...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp TCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGGGAGCATCGACCAGCTaGGGTAGTGTTGGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: SRVSRHSKTGSVMSFPPEGASTS*GSVGPN
Trigger: ATTGGGACCAACACTACCTCAGCTGGTCGATGCTCC...CTCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp TCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SRVSRHSKTGSVMSFPPEVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...CTCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGTCGAGGCTGGCCTCTaGGGTTCCACAGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRVEAGL*GSTEKQ
Trigger: TTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGAC...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCGCAGTGTGGAATTGGTaGCCACTGCCCGTATATGAA +
Preference number: 4 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVAVWNW*PLPVYE
Trigger: TTCATATACGGGCAGTGGGCACCAATTCCACACTGC...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR GCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAATCTTCCCAAAGGCTTTaGTGCCGTATCGGACACGTT +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSESSQRL*CRIGHV
Trigger: AACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGA...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGGAAATGTGTGGAGATaGAAGAAGGCAACACCAAGG +
Preference number: 4 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSGNVWR*KKATPR
Trigger: CCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCC...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp TCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCGCCAACCAGTCAGAATaGCTCTCATTTAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRAANQSECLSFRPASPIANQSE*LSFRPA
Trigger: TGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGC...GATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp CTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAACCGTATCGGACACGTTaGTGCTGTCAAACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LMGGSPTVAGPTGKKGKQPYRTR*CCQTQA
Trigger: TGCTTGAGTTTGACAGCACCAACGTGTCCGATACGG...TTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp GATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGGAGTATGGAGGATATaGTCTTCCCAAAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: DGREPHSSWSNWEERQTRGVWRI*SSQRLC
Trigger: GCAAAGCCTTTGGGAAGACCATATCCTCCATACTCC...CCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp GCTGGTCCAACTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCTGCTGGAGTATGGAGGATATaGTCTTCCCAAAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AGPTGRRPVHIHRRWSAAGVWRI*SSQRLC
Trigger: GCAAAGCCTTTGGGAAGACCATATCCTCCATACTCC...AGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGTTGGACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp ACTGGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGGGAGTATGGAGGATATaGTCTTCCCAAAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: TGNIARPCLWGSPGSRGWGVWRI*SSQRLC
Trigger: GCAAAGCCTTTGGGAAGACCATATCCTCCATACTCC...CCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR CCA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTATCGGCCAAGGAGTATaGAGGATATGGTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSIGQGV*RIWSSQ
Trigger: TTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCGACCTGGAAAAGGCCTaGACCCTGAAGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: REMCGDARRQHQGDLINSDLEKA*TLKARL
Trigger: CAGCCTGGCCTTCAGGGTCCAGGCCTTTTCCAGGTC...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCGTTGGGCTGGTCGGCTaGACCTGGAAAAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: REMCGDARRQHQGDLINSVGLVG*TWKRPG
Trigger: TCCAGGCCTTTTCCAGGTCCAGCCGACCAGCCCAAC...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACACATATTCATCGTCGATaGAGTGCTGCTCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: SEGAGWNLMLQPPEFRGTHIHRR*SAAPAL
Trigger: CAATGCAGGAGCAGCACTCCATCGACGATGAATATG...TGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAACATATTCATCGTCGATaGAGTGCTGCTCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: KPDGREPHSSWSNWEERQHIHRR*SAAPAL
Trigger: CAATGCAGGAGCAGCACTCCATCGACGATGAATATG...TTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp CCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCCCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: PGQPTSQNASHLGLQVPSHIHRR*SAAPAL
Trigger: CAATGCAGGAGCAGCACTCCATCGACGATGAATATG...GGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCACATATTCATCGTCGATaGAGTGCTGCTCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPHIHRR*SAAPAL
Trigger: CAATGCAGGAGCAGCACTCCATCGACGATGAATATG...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQHIHRR*SAAPAL
Trigger: CAATGCAGGAGCAGCACTCCATCGACGATGAATATG...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCTGGGAGTAAGCCACTaGTCGCCACTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: MCGDARRQHQGDLINSPVLGVSH*SPLCKA
Trigger: GGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAG...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCAATAGCCAGGGCCTGTaGAAGCCCCGAACGTCAGAT +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSNSQGL*KPRTSD
Trigger: ATCTGACGTTCGGGGCTTCCACAGGCCCTGGCTATT...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCATCTGAGTACTTCTTGTaGTGCAGCAGCAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPSEYFL*CSSRTK
Trigger: CTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGA...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGTCTGAGTACTTCTTGTaGTGCAGCAGCAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQSEYFL*CSSRTK
Trigger: CTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGA...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTGCGGGCCTTAATTTATaGACTGGTACTCTGAGTACT +
Preference number: 4 (lower is better)
Translates to: GNTKGTLSIALSPARLQSAGLNL*TGTLST
Trigger: AGTACTCAGAGTACCAGTCCATAAATTAAGGCCCGC...ACTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAGCGGGCCTTAATTTATaGACTGGTACTCTGAGTACT +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARAGLNL*TGTLST
Trigger: AGTACTCAGAGTACCAGTCCATAAATTAAGGCCCGC...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAGCGGGCCTTAATTTATaGACTGGTACTCTGAGTACT +
Preference number: 4 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPAGLNL*TGTLST
Trigger: AGTACTCAGAGTACCAGTCCATAAATTAAGGCCCGC...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSSEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRSEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSSEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR TCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTTTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLFMGWP*NVALRV
Trigger: CACCCTGAGTGCCACATTTCAAGGCCACCCCATGAA...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCACTCAGGAGTCTGAGGTaGGAGAATCACTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSLRSLR*ENHSRP
Trigger: TGGCCTTGAGTGATTCTCTCACCTCAGACTCCTGAG...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR GCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCTCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGT +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSSQRLC*RIGHVG
Trigger: ACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGA...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGAGGGTAAATCTTCCCAAAGGCTTTaGTGCCGTATCGGACACGTT +
Preference number: 4 (lower is better)
Translates to: EPHSSWSNWEERQTREGKSSQRL*CRIGHV
Trigger: AACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGA...TTTACCCTCCCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR GCA 90 bp TCTATTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGTCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SIFLPSRAANQSECLSFRSSMEC*SCIEGQ
Trigger: CTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGA...CCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTTCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLSSSME*CSCIEG
Trigger: CCCCTCAATGCAGGAGCAGCACTCCATCGACGATGA...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTGAGTACTTCTTGTGGTaGAGCAGCAGAACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPEYFLW*SSRTKP
Trigger: CGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTC...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGGAGTACTTCTTGTGGTaGAGCAGCAGAACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: SRVSRHSKTGSVMSFPPEEYFLW*SSRTKP
Trigger: CGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTC...CTCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCGGAAATGTGTGGAGATaGAAGAAGGCAACACCAAGG +
Preference number: 4 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVGNVWR*KKATPR
Trigger: CCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCC...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp CCAACAAAGTATGAAGGAAGCCCCACCTGGGGGTCTCCAGGAAGTCGAGGCTGGATAAATCTATTTTCTTaGCTTCCAGGGCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: PTKYEGSPTWGSPGSRGWINLFS*LPGQPT
Trigger: GGTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTAT...CCAGCCTCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTCATACTTTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGCGGATCATCAGGTCAGGAGATTGAGACCATCTCGGGTGAAACCCCATCTCTACCGTATCGGACACGTTaGTGCTGTCAAACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: GGSSGQEIETISGETPSLPYRTR*CCQTQA
Trigger: TGCTTGAGTTTGACAGCACCAACGTGTCCGATACGG...TAGAGATGGGGTTTCACCCGAGATGGTCTCAATCTCCTGACCTGATGATCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR CCA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCGGAGTATGGAGGATATaGTCTTCCCAAAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVGVWRI*SSQRLC
Trigger: GCAAAGCCTTTGGGAAGACCATATCCTCCATACTCC...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAAATCGGCCAAGGAGTATaGAGGATATGGTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSEIGQGV*RIWSSQ
Trigger: TTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AAACAAGGGAGGGTAAAGAGGACCAACCTGTGCCCGACCCTCTTTTCCTTGCCAATGTGGCACTCAGGGTaGCAGGATCCAATGAATCAG +
Preference number: 4 (lower is better)
Translates to: KQGRVKRTNLCPTLFSLPMWHSG*QDPMNQ
Trigger: CTGATTCATTGGATCCTGCCACCCTGAGTGCCACAT...TGGCAAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTTTACCCTCCCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp AGGCACAGAAGTTATTCTGGGACCCAAAGAAGGCTCGGACAATGGGTGACTGGGATGTGGCACTCAGGGTaGCAGGATCCAATGAATCAG +
Preference number: 4 (lower is better)
Translates to: RHRSYSGTQRRLGQWVTGMWHSG*QDPMNQ
Trigger: CTGATTCATTGGATCCTGCCACCCTGAGTGCCACAT...CCCAGTCACCCATTGTCCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCAGTAGCTGGTCCAACTaGAAGACGGCCGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSSSWSN*KTAGAY
Trigger: ATATGCACCGGCCGTCTTCCAGTTGGACCAGCTACT...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TCTATTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCTGGGAGTAAGCCACTaGTCGCCACTGTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SIFLPSRAANQSECLSFRLGVSH*SPLCKA
Trigger: GGCTTTGCACAGTGGCGACCAGTGGCTTACTCCCAG...CCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGCACAGAAGTTATTCTaGGACCCAAAGAAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SCLPGQPTSQNASHLGLQAQKLF*DPKKAR
Trigger: CCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGC...TTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCTGAGTACTTCTTGTaGTGCAGCAGCAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPSEYFL*CSSRTK
Trigger: CTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGA...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAATCTGAGTACTTCTTGTaGTGCAGCAGCAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSESEYFL*CSSRTK
Trigger: CTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGA...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLSEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GCGGATCATCAGGTCAGGAGATTGAGACCATCTCGGGTGAAACCCCATCTCTACTATGGACTGGTACTCTaGGTACTTCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ADHQVRRLRPSRVKPHLYYGLVL*VLLVVQ
Trigger: CTGCACCACAAGAAGTACTCAGAGTACCAGTCCATA...GTAGAGATGGGGTTTCACCCGAGATGGTCTCAATCTCCTGACCTGATGATCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR TCA 90 bp GAATCACTCAAGGCCAGAAGTTTGAGCCCAGACTGGCAACATAGCAAGACCATGCTCAGGAGTCTGAGGTaGGAGAATCACTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ESLKARSLSPDWQHSKTMLRSLR*ENHSRP
Trigger: TGGCCTTGAGTGATTCTCTCACCTCAGACTCCTGAG...CATGGTCTTGCTATGTTGCCAGTCTGGGCTCAAACTTCTGGCCTTGAGTGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR GCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCGGAATTGGTGCCCACTaGCCGTATATGAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSGIGAH*PYMKQV
Trigger: AACCTGCTTCATATACGGGCAGTGGGCACCAATTCC...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000614643.4
ENST00000647767.1
CDS-3UTR GCA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGGAATTGGTGCCCACTaGCCGTATATGAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRGIGAH*PYMKQV
Trigger: AACCTGCTTCATATACGGGCAGTGGGCACCAATTCC...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000614643.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGTATCGGACACGTTGGTaGTGTCAAACTCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FSCLPGQPTSQNASHLGLYRTRW*CQTQAA
Trigger: GGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATA...CAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR GCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTATCGGACACGTTGGTaGTGTCAAACTCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSYRTRW*CQTQAA
Trigger: GGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATA...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000647767.1
CDS-3UTR GCA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCTCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGT +
Preference number: 4 (lower is better)
Translates to: MCGDARRQHQGDLINSPVSQRLC*RIGHVG
Trigger: ACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGA...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTTCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGT +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLSQRLC*RIGHVG
Trigger: ACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGA...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTTCTTCCCAAAGGCTTTaGTGCCGTATCGGACACGTT +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPSSQRL*CRIGHV
Trigger: AACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGA...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp TCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGGCCAACCAGTCAGAATaGCTCTCATTTAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SRVSRHSKTGSVMSFPPEANQSE*LSFRPA
Trigger: TGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGC...CTCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGAGTGCAGTGTGGAATTaGTGCCCACTGCCCGTATAT +
Preference number: 4 (lower is better)
Translates to: SRVSRHSKTGSVMSFPPESAVWN*CPLPVY
Trigger: ATATACGGGCAGTGGGCACCAATTCCACACTGCACT...CTCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000614643.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGCCGTATCGGACACGTTaGTGCTGTCAAACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: SRVSRHSKTGSVMSFPPEPYRTR*CCQTQA
Trigger: TGCTTGAGTTTGACAGCACCAACGTGTCCGATACGG...CTCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AGGCAAACAAGGGAGGGTAAAGAGGACCAACCTGTGCCCGACCCTCTTTTCCTTATCGGCCAAGGAGTATaGAGGATATGGTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RQTREGKEDQPVPDPLFLIGQGV*RIWSSQ
Trigger: TTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT...AAGGAAAAGAGGGTCGGGCACAGGTTGGTCCTCTTTACCCTCCCTTGTTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CCA 90 bp TTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGATGTGGCACTCAGGGTaGCAGGATCCAATGAATCAG +
Preference number: 4 (lower is better)
Translates to: FSCLPGQPTSQNASHLGLMWHSG*QDPMNQ
Trigger: CTGATTCATTGGATCCTGCCACCCTGAGTGCCACAT...CAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCATGTGGCACTCAGGGTaGCAGGATCCAATGAATCAG +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSMWHSG*QDPMNQ
Trigger: CTGATTCATTGGATCCTGCCACCCTGAGTGCCACAT...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCGCACAGAAGTTATTCTaGGACCCAAAGAAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSAQKLF*DPKKAR
Trigger: CCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGC...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCGCACAGAAGTTATTCTaGGACCCAAAGAAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSAQKLF*DPKKAR
Trigger: CCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGC...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAAGCGGGCCTTAATTTATaGACTGGTACTCTGAGTACT +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSEAGLNL*TGTLST
Trigger: AGTACTCAGAGTACCAGTCCATAAATTAAGGCCCGC...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCAGTGAAGGGGCCGGCTaGAACTTGATGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: REMCGDARRQHQGDLINSSEGAG*NLMLQP
Trigger: AGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TCTATTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCGGACAATGGGTGACTaGAAGACGGCCGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: SIFLPSRAANQSECLSFRRTMGD*KTAGAY
Trigger: ATATGCACCGGCCGTCTTCCAGTCACCCATTGTCCG...CCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481050.1
CDS-3UTR TCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCGGTGGCAGGATCCAATaGATCAGTGATGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSGGRIQ*ISDVVP
Trigger: TGGAACAACATCACTGATTCATTGGATCCTGCCACC...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCCCCCGAACGTCAGATTaGAGGCACAGAAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSPRTSD*RHRSYS
Trigger: AGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGG...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCACCCCGAACGTCAGATTaGAGGCACAGAAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSPRTSD*RHRSYS
Trigger: AGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGG...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTATGGACTGGTACTCTaGGTACTTCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSYGLVL*VLLVVQ
Trigger: CTGCACCACAAGAAGTACTCAGAGTACCAGTCCATA...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR TCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTTATGGACTGGTACTCTaGGTACTTCTTGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPYGLVL*VLLVVQ
Trigger: CTGCACCACAAGAAGTACTCAGAGTACCAGTCCATA...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR GCA 90 bp GGGTGGGGGAGAATAGGGTGGGAATCGGTAAAGGGAGGAAGATATTTTACTATATCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: GWGRIGWESVKGGRYFTISSSME*CSCIEG
Trigger: CCCCTCAATGCAGGAGCAGCACTCCATCGACGATGA...TATAGTAAAATATCTTCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR GCA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCGAGTACTTCTTGTGGTaGAGCAGCAGAACCAAGCCG +
Preference number: 4 (lower is better)
Translates to: REMCGDARRQHQGDLINSEYFLW*SSRTKP
Trigger: CGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTC...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTGGAAATGTGTGGAGATaGAAGAAGGCAACACCAAGG +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPGNVWR*KKATPR
Trigger: CCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCC...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp TTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGGGAAATGTGTGGAGATaGAAGAAGGCAACACCAAGG +
Preference number: 4 (lower is better)
Translates to: FSCLPGQPTSQNASHLGLGNVWR*KKATPR
Trigger: CCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCC...CAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTGCCAACCAGTCAGAATaGCTCTCATTTAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLANQSE*LSFRPA
Trigger: TGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGC...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAAATAAATCTATTTTCTTaGCTTCCAGGGCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: GSRGWPLRFHRKARWGSEINLFS*LPGQPT
Trigger: GGTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTAT...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCATATCGGACACGTTGGTaGTGTCAAACTCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSYRTRW*CQTQAA
Trigger: AGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATA...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622703.4
CDS-3UTR CCA 90 bp CTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAATCGGCCAAGGAGTATaGAGGATATGGTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LELDAPTSRVSRHSKTGSIGQGV*RIWSSQ
Trigger: TTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT...TGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCAGTAGCTGGTCCAACTaGAAGACGGCCGGTGCATAT +
Preference number: 4 (lower is better)
Translates to: REMCGDARRQHQGDLINSSSWSN*KTAGAY
Trigger: ATATGCACCGGCCGTCTTCCAGTTGGACCAGCTACT...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCGGACAATGGGTGACTaGGGAAGAGAGTATGCTAAG +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLRTMGD*GREYAK
Trigger: CTTAGCATACTCTCTTCCCCAGTCACCCATTGTCCG...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTTCTGAGTACTTCTTGTaGTGCAGCAGCAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPSEYFL*CSSRTK
Trigger: CTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGA...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTCTGAGTACTTCTTGTaGTGCAGCAGCAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSSEYFL*CSSRTK
Trigger: CTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGA...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAAGTTTGAGCCCAGACTaGCAACATAGCAAGACCATG +
Preference number: 4 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRSLSPD*QHSKTM
Trigger: CATGGTCTTGCTATGTTGCCAGTCTGGGCTCAAACT...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR TCA 90 bp GAATCACTCAAGGCCAGAAGTTTGAGCCCAGACTGGCAACATAGCAAGACCATGCCCCGAACGTCAGATTaGAGGCACAGAAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: ESLKARSLSPDWQHSKTMPRTSD*RHRSYS
Trigger: AGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGG...CATGGTCTTGCTATGTTGCCAGTCTGGGCTCAAACTTCTGGCCTTGAGTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR GCA 90 bp TCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAATAAATCTATTTTCTTaGCTTCCAGGGCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: SCLPGQPTSQNASHLGLQINLFS*LPGQPT
Trigger: GGTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTAT...TTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR GCA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCATCACCCTCACATTTaGCCTACTCCACAATCCCGT +
Preference number: 4 (lower is better)
Translates to: REMCGDARRQHQGDLINSHHPHI*PTPQSR
Trigger: ACGGGATTGTGGAGTAGGGCAAATGTGAGGGTGATG...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR CCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTGGAGTATGGAGGATATaGTCTTCCCAAAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLGVWRI*SSQRLC
Trigger: GCAAAGCCTTTGGGAAGACCATATCCTCCATACTCC...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTG +
Preference number: 4 (lower is better)
Translates to: CSNLQSFEAQQDRFSNVLHIHRR*SAAPAL
Trigger: CAATGCAGGAGCAGCACTCCATCGACGATGAATATG...AAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CCA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCGCGGGCCTTAATTTATaGACTGGTACTCTGAGTACT +
Preference number: 4 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSAGLNL*TGTLST
Trigger: AGTACTCAGAGTACCAGTCCATAAATTAAGGCCCGC...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAAATGTATTATCACACTaGCTCTTCTTCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARNVLSH*LFFFLL
Trigger: AAGAAGGAAGAAGAAGAGCCAGTGTGATAATACATT...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461597.1
CDS-3UTR GCA 90 bp GGGTGGGGGAGAATAGGGTGGGAATCGGTAAAGGGAGGAAGATATTTTACTATAGGAATTGGTGCCCACTaGCCGTATATGAAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GWGRIGWESVKGGRYFTIGIGAH*PYMKQV
Trigger: AACCTGCTTCATATACGGGCAGTGGGCACCAATTCC...TATAGTAAAATATCTTCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR GCA 90 bp GGGTGGGGGAGAATAGGGTGGGAATCGGTAAAGGGAGGAAGATATTTTACTATAGCAGTGTGGAATTGGTaGCCACTGCCCGTATATGAA +
Preference number: 4 (lower is better)
Translates to: GWGRIGWESVKGGRYFTIAVWNW*PLPVYE
Trigger: TTCATATACGGGCAGTGGGCACCAATTCCACACTGC...TATAGTAAAATATCTTCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR CCA 90 bp TGGGGGAAAAATAAACATGCAGAGACAGTCTATATAGTATGCTGCCATACTTCACCAGGAAGTCGAGGCTaGCCTCTGAGGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: WGKNKHAETVYIVCCHTSPGSRG*PLRFHR
Trigger: TCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG...TGAAGTATGGCAGCATACTATATAGACTGTCTCTGCATGTTTATTTTTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461597.1
CDS-3UTR GCA 90 bp TCTATTTTCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGATAAATCTATTTTCTTaGCTTCCAGGGCAGCCAACC +
Preference number: 4 (lower is better)
Translates to: SIFLPSRAANQSECLSFRINLFS*LPGQPT
Trigger: GGTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTAT...CCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGAAAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CCA 90 bp ACTCAATGTATTATCACACTGGCTCTTCTTCTTCCTTCTTCCTCCTTTCTTTCTAATAGCCAGGGCCTGTaGAAGCCCCGAACGTCAGAT +
Preference number: 4 (lower is better)
Translates to: TQCIITLALLLPSSSFLSNSQGL*KPRTSD
Trigger: ATCTGACGTTCGGGGCTTCCACAGGCCCTGGCTATT...AGAAAGAAAGGAGGAAGAAGGAAGAAGAAGAGCCAGTGTGATAATACATTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461597.1
CDS-3UTR GCA 90 bp AAACATGCAGAGACAGTCTATATAGTATGCTGCCATACTTCAGAAAAGGGAAAAACAGTCTATATAGTATaGTGCCATACTTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: KHAETVYIVCCHTSEKGKTVYIV*CHTSEK
Trigger: CTTTTCTGAAGTATGGCAGCATACTATATAGACTGT...TTTTCCCTTTTCTGAAGTATGGCAGCATACTATATAGACTGTCTCTGCATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461597.1
CDS-3UTR CAA 90 bp GGCCAGGCTGCCATTGGCAAAAGTCCTGGTAGGGTCGTTCATGGGGTGGCCTTGCAGGAGGCGAGGGGGTaGGGCTGGTCGGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: GQAAIGKSPGRVVHGVALQEARG*GWSAGP
Trigger: AGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTG...CAAGGCCACCCCATGAACGACCCTACCAGGACTTTTGCCAATGGCAGCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS TCA 90 bp CCCCTGGATGCCCGGTTCCAGCCACCCTGCAAGGGTAGCGTTTCCTaGAACTTCTATCGCTGTAGCCCCAGGGCCCTCACCTGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: PLDARFQPPCKGSVS*NFYRCSPRALTWRV
Trigger: GACCCGCCAGGTGAGGGCCCTGGGGCTACAGCGATAGAAGTTTCAGGAAACGCTACCCTTGCAGGGTGGCTGGAACCGGGCATCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR CAA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGCAGGAGGCGAGGGGGTaGGGCTGGTCGGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKQEARG*GWSAGP
Trigger: AGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTG...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp CCAACAAAGTATGAAGGAAGCCCCACCTGGGGGTCTCCAGGAAGTCGAGGCTGGCAGGAGGCGAGGGGGTaGGGCTGGTCGGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: PTKYEGSPTWGSPGSRGWQEARG*GWSAGP
Trigger: AGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTG...CCAGCCTCGACTTCCTGGAGACCCCCAGGTGGGGCTTCCTTCATACTTTGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp ACTGGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGCAGGAGGCGAGGGGGTaGGGCTGGTCGGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: TGNIARPCLWGSPGSRGWQEARG*GWSAGP
Trigger: AGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTG...CCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS GCA 90 bp CCAGAGGCCCCAGGCTGCTCCACACATAGTGCAGTGTGGAATTGGTaGCCACTGCCCGTATATGAAGCAGGTTCTGCAGGGGGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: PEAPGCSTHSAVWNW*PLPVYEAGSAGGPA
Trigger: GGCTGGGCCCCCTGCAGAACCTGCTTCATATACGGGCAGTGGGCACCAATTCCACACTGCACTATGTGTGGAGCAGCCTGGGGCCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000479084.1
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS CCA 90 bp CAGGAGCATCGACCTGGAAGACGGCCGGTGCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: QEHRPGRRPVHIHRR*SAAPALRGSQGPGP
Trigger: TGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGGTCGATGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612353.4
CDS-3UTR CAA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCAGCAGGAGGCTCCAGTaGACGCTCAGGGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGSRRLQ*TLRVLW
Trigger: CCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGCT...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR CAA 90 bp GCCCAATGTGGCTACCTCCAGCCCAAACAGGGAACGGTTTCCCCGGGGAGAGGCAAGGCCAGGCTGCCATaGGCAAAAGTCCTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: AQCGYLQPKQGTVSPGRGKARLP*AKVLVG
Trigger: CCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTT...GCCTCTCCCCGGGGAAACCGTTCCCTGTTTGGGCTGGAGGTAGCCACATTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS-3UTR CAA 90 bp CTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAACAGGAGGCGAGGGGGTaGGGCTGGTCGGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: LMGGSPTVAGPTGKKGKQQEARG*GWSAGP
Trigger: AGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTG...TTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CAA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCAGGAGGCGAGGGGGTaGGGCTGGTCGGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVQEARG*GWSAGP
Trigger: AGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTG...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS GCA 90 bp CTCCTCTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCAATGTGGCT +
Preference number: 5 (lower is better)
Translates to: LLWKTAGAYSSSMEC*SCIEGQSGPWPNVA
Trigger: AGCCACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS GCA 90 bp TCCCTCCTCTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCAATGTG +
Preference number: 5 (lower is better)
Translates to: SLLWKTAGAYSSSME*CSCIEGQSGPWPNV
Trigger: CACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGAGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS GCA 90 bp CTGACCTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCAATGTGGCT +
Preference number: 5 (lower is better)
Translates to: LTWKTAGAYSSSMEC*SCIEGQSGPWPNVA
Trigger: AGCCACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484214.1
ENST00000497955.1
CDS GCA 90 bp AGCCTGACCTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCAATGTG +
Preference number: 5 (lower is better)
Translates to: SLTWKTAGAYSSSME*CSCIEGQSGPWPNV
Trigger: CACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGGTCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484214.1
ENST00000497955.1
CDS GCA 90 bp TCGACCTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTGCTaGTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCAATGTGGCT +
Preference number: 5 (lower is better)
Translates to: STWKTAGAYSSSMEC*SCIEGQSGPWPNVA
Trigger: AGCCACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612353.4
CDS GCA 90 bp GCATCGACCTGGAAGACGGCCGGTGCATATTCATCGTCGATGGAGTaGTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCAATGTG +
Preference number: 5 (lower is better)
Translates to: ASTWKTAGAYSSSME*CSCIEGQSGPWPNV
Trigger: CACATTGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGGTCGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612353.4
CDS CCA 90 bp CTGCCAGAGGCCCCAGGCTGCTCCACACATAGTGCAGTGTGGAATTaGTGCCCACTGCCCGTATATGAAGCAGGTTCTGCAGGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LPEAPGCSTHSAVWN*CPLPVYEAGSAGGP
Trigger: TGGGCCCCCTGCAGAACCTGCTTCATATACGGGCAGTGGGCACCAATTCCACACTGCACTATGTGTGGAGCAGCCTGGGGCCTCTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000479084.1
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS CCA 90 bp CTCAATCCCTCCTCTGGAAGACGGCCGGTGCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTGAGGGGCAGTCAGGGCCCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: LNPSSGRRPVHIHRR*SAAPALRGSQGPGP
Trigger: TGGGCCAGGGCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGAGGAGGGATTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CAA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCCCAGCTGAGGTAGTGTaGGTCCCAATAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGPAEVV*VPIARA
Trigger: GGCCCTGGCTATTGGGACCAACACTACCTCAGCTGG...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS GCA 90 bp CCCCAGGCTGCTCCACACATAGTGCAGTGTGGAATTGGTGCCCACTaGCCGTATATGAAGCAGGTTCTGCAGGGGGCCCAGCCAGTTAGG +
Preference number: 5 (lower is better)
Translates to: PQAAPHIVQCGIGAH*PYMKQVLQGAQPVR
Trigger: CCTAACTGGCTGGGCCCCCTGCAGAACCTGCTTCATATACGGGCAGTGGGCACCAATTCCACACTGCACTATGTGTGGAGCAGCCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS GCA 90 bp GGGTCACCCAGGGCTGAGTCGGGGTCCAGACATCACCCTCACATTTaGCCTACTCCACAATCCCGTCCCATGACCCATGACCATCTCCCA +
Preference number: 5 (lower is better)
Translates to: GSPRAESGSRHHPHI*PTPQSRPMTHDHLP
Trigger: TGGGAGATGGTCATGGGTCATGGGACGGGATTGTGGAGTAGGGCAAATGTGAGGGTGATGTCTGGACCCCGACTCAGCCCTGGGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR CAA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTAGCAGGAGGCTCCAGTaGACGCTCAGGGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSSRRLQ*TLRVLW
Trigger: CCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGCT...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR CAA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTAGCAGGAGGCTCCAGTaGACGCTCAGGGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFSRRLQ*TLRVLW
Trigger: CCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGCT...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS-3UTR CAA 90 bp GGGAGTAAGCCACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTCTTCCCAAAGGCTTaGCTGCCGTATCGGACACGT +
Preference number: 5 (lower is better)
Translates to: GSKPLVATVQSLMGGSPTVFPKA*LPYRTR
Trigger: ACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGAC...TGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGTGGCTTACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CAA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCAAGGCCAGGCTGCCATaGGCAAAAGTCCTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGKARLP*AKVLVG
Trigger: CCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTT...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACCAGCTGAGGTAGTGTaGGTCCCAATAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARPAEVV*VPIARA
Trigger: GGCCCTGGCTATTGGGACCAACACTACCTCAGCTGG...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp GGCAACATAGCAAGACCATGTCTCTGGGGGTCTCCAGGAAGTCGAGGCTGGCCTCCAGCTGAGGTAGTGTaGGTCCCAATAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GNIARPCLWGSPGSRGWPPAEVV*VPIARA
Trigger: GGCCCTGGCTATTGGGACCAACACTACCTCAGCTGG...AGGCCAGCCTCGACTTCCTGGAGACCCCCAGAGACATGGTCTTGCTATGTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS-3UTR CAA 90 bp CCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCCGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: PGQPTSQNASHLGLQVPSGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...GGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS CCA 90 bp GTGCTGTCAAACTCAAGCAGCTGGAGGGTGGGGGTAGGGTGGAACTaGGCTTGCCTCAGTTTTTCTCCCGAGACCACACCTCCCACTCAC +
Preference number: 5 (lower is better)
Translates to: VLSNSSSWRVGVGWN*ACLSFSPETTPPTH
Trigger: GTGAGTGGGAGGTGTGGTCTCGGGAGAAAAACTGAGGCAAGCCCAGTTCCACCCTACCCCCACCCTCCAGCTGCTTGAGTTTGACAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS CCA 90 bp ACGTTGGTGCTGTCAAACTCAAGCAGCTGGAGGGTGGGGGTAGGGTaGAACTGGGCTTGCCTCAGTTTTTCTCCCGAGACCACACCTCCC +
Preference number: 5 (lower is better)
Translates to: TLVLSNSSSWRVGVG*NWACLSFSPETTPP
Trigger: GGGAGGTGTGGTCTCGGGAGAAAAACTGAGGCAAGCCCAGTTCCACCCTACCCCCACCCTCCAGCTGCTTGAGTTTGACAGCACCAACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS-3UTR CAA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTAAGGCCAGGCTGCCATaGGCAAAAGTCCTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPKARLP*AKVLVG
Trigger: CCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTT...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCCAGCTGAGGTAGTGTaGGTCCCAATAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFPAEVV*VPIARA
Trigger: GGCCCTGGCTATTGGGACCAACACTACCTCAGCTGG...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp GGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GSRGWPLRFHRKARWGSEGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...TTCACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS CCA 90 bp TTCGGCTACGGCCTGACGTTTCTGCCACTGCTGTCGATGCTGATGTaGAACCTCTACTACATGTTCGTGGTGGAGCCGGAGCGCATGCTC +
Preference number: 5 (lower is better)
Translates to: FGYGLTFLPLLSMLM*NLYYMFVVEPERML
Trigger: GAGCATGCGCTCCGGCTCCACCACGAACATGTAGTAGAGGTTCCACATCAGCATCGACAGCAGTGGCAGAAACGTCAGGCCGTAGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497831.1
CDS-3UTR CAA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGC +
Preference number: 5 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPAVSDT*VLSNSS
Trigger: GCTTGAGTTTGACAGCACCAACGTGTCCGATACGGC...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp GGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGAGTCTTCCCAAAGGCTTaGCTGCCGTATCGGACACGT +
Preference number: 5 (lower is better)
Translates to: GAGWNLMLQPPEFRGTARVFPKA*LPYRTR
Trigger: ACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGAC...TCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp CAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCGTCTTCCCAAAGGCTTaGCTGCCGTATCGGACACGT +
Preference number: 5 (lower is better)
Translates to: QEGNTKGTLSIALSPARLVFPKA*LPYRTR
Trigger: ACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGAC...GAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp GAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAGTCTTCCCAAAGGCTTaGCTGCCGTATCGGACACGT +
Preference number: 5 (lower is better)
Translates to: EGAGWNLMLQPPEFRGTAVFPKA*LPYRTR
Trigger: ACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGAC...TGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTAAGGCCAGGCTGCCATaGGCAAAAGTCCTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSKARLP*AKVLVG
Trigger: CCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTT...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp GATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGAAGGCCAGGCTGCCATaGGCAAAAGTCCTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: DGREPHSSWSNWEERQTRKARLP*AKVLVG
Trigger: CCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTT...CCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CAA 90 bp CCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCCAAGGCCAGGCTGCCATaGGCAAAAGTCCTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: PGQPTSQNASHLGLQVPSKARLP*AKVLVG
Trigger: CCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTT...GGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCAGGAGGCGAGGGGGTaGGGCTGGTCGGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: REMCGDARRQHQGDLINSQEARG*GWSAGP
Trigger: AGGTCCAGCCGACCAGCCCAACCCCCTCGCCTCCTG...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp TGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCAGCTGAGGTAGTGTaGGTCCCAATAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: CLPGQPTSQNASHLGLQVPAEVV*VPIARA
Trigger: GGCCCTGGCTATTGGGACCAACACTACCTCAGCTGG...GACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp GGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAACGTCTTCCCAAAGGCTTaGCCCCAGTCTTTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: GRHCAKPDGREPHSSWSNVFPKA*PQSLVP
Trigger: TGGAACTAAAGACTGGGGCAAAGCCTTTGGGAAGAC...GTTGGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476177.6
CDS TCA 90 bp TCACCCTCACATTTGCCCTACTCCACAATCCCGTCCCATGACCCATaGCCATCTCCCACACCCTCCAGGTTGAAGAACCCTCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: SPSHLPYSTIPSHDP*PSPTPSRLKNPPLG
Trigger: GCCAAGAGGAGGGTTCTTCAACCTGGAGGGTGTGGGAGATGGTCATGGGTCATGGGACGGGATTGTGGAGTAGGGCAAATGTGAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS TCA 90 bp CCAGACATCACCCTCACATTTGCCCTACTCCACAATCCCGTCCCATaGCCCATGACCATCTCCCACACCCTCCAGGTTGAAGAACCCTCC +
Preference number: 5 (lower is better)
Translates to: PDITLTFALLHNPVP*PMTISHTLQVEEPS
Trigger: GGAGGGTTCTTCAACCTGGAGGGTGTGGGAGATGGTCATGGGTCATGGGACGGGATTGTGGAGTAGGGCAAATGTGAGGGTGATGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS-3UTR CAA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGC +
Preference number: 5 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPAVSDT*VLSNSS
Trigger: GCTTGAGTTTGACAGCACCAACGTGTCCGATACGGC...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp GATGGGAGGGAGCCCCACAGTAGCTGGTCCAACTGGGAAGAAAGGCAAACAAGGGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGC +
Preference number: 5 (lower is better)
Translates to: DGREPHSSWSNWEERQTRAVSDT*VLSNSS
Trigger: GCTTGAGTTTGACAGCACCAACGTGTCCGATACGGC...CCTTGTTTGCCTTTCTTCCCAGTTGGACCAGCTACTGTGGGGCTCCCTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS-3UTR CAA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTGTCTTCCCAAAGGCTTaGCTGCCGTATCGGACACGT +
Preference number: 5 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSVFPKA*LPYRTR
Trigger: ACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGAC...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp TCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCAAGGCCAGGCTGCCATaGGCAAAAGTCCTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: SRAANQSECLSFRPASPIKARLP*AKVLVG
Trigger: CCCTACCAGGACTTTTGCCAATGGCAGCCTGGCCTT...GATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp GGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCGCCCCGAACGTCAGATaGAAGGCACAGAAGTTATTC +
Preference number: 5 (lower is better)
Translates to: GSEGAGWNLMLQPPEFRGAPNVR*KAQKLF
Trigger: GAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGC...GCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS CCA 90 bp CCTGTGGAAGCCCCGAACGTCAGATTGAAGGCACAGAAGTTATTCTaGGACCCAAAGAAGGCTCGGACAATGGGTGACTGGAAGACGGCC +
Preference number: 5 (lower is better)
Translates to: PVEAPNVRLKAQKLF*DPKKARTMGDWKTA
Trigger: GGCCGTCTTCCAGTCACCCATTGTCCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGCTTCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481050.1
CDS CCA 90 bp TTTGCTGCCGTATCGGACACGTTGGTGCTGTCAAACTCAAGCAGCTaGAGGGTGGGGGTAGGGTGGAACTGGGCTTGCCTCAGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: FAAVSDTLVLSNSSS*RVGVGWNWACLSFS
Trigger: AGAAAAACTGAGGCAAGCCCAGTTCCACCCTACCCCCACCCTCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS-3UTR CAA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAGCCCCGAACGTCAGATaGAAGGCACAGAAGTTATTC +
Preference number: 5 (lower is better)
Translates to: EGNTKGTLSIALSPARLQAPNVR*KAQKLF
Trigger: GAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGC...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp TGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGCCCCGAACGTCAGATaGAAGGCACAGAAGTTATTC +
Preference number: 5 (lower is better)
Translates to: WGSEGAGWNLMLQPPEFRAPNVR*KAQKLF
Trigger: GAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGC...TCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp AGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAGTACTCTGAGTACTTCTaGTGGTGCAGCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: RQHQGDLINSPVPCPPPKYSEYF*WCSSRT
Trigger: GGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTA...CTTTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp GCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTTACTCTGAGTACTTCTaGTGGTGCAGCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: ARRQHQGDLINSPVPCPPYSEYF*WCSSRT
Trigger: GGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTA...AGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp CCAGGAAGTCGAGGCTGGCCTCTGAGGTTCCACAGAAAAGCAAGATGGGGGAGTACATCACCCTCACATTaGCCCTACTCCACAATCCCG +
Preference number: 5 (lower is better)
Translates to: PGSRGWPLRFHRKARWGSTSPSH*PYSTIP
Trigger: CGGGATTGTGGAGTAGGGCAAATGTGAGGGTGATGT...ACTCCCCCATCTTGCTTTTCTGTGGAACCTCAGAGGCCAGCCTCGACTTCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS TCA 90 bp GTTGGTCCCAATAGCCAGGGCCTGTGGAAGCCCCGAACGTCAGATTaGAGGCACAGAAGTTATTCTGGGACCCAAAGAAGGCTCGGACAA +
Preference number: 5 (lower is better)
Translates to: VGPNSQGLWKPRTSD*RHRSYSGTQRRLGQ
Trigger: TTGTCCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGCTTCCACAGGCCCTGGCTATTGGGACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS GCA 90 bp ATCGGCCAAGGAGTATGGAGGATATGGTCTTCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGTGCTGTCAAACTCAAGCAGCTGGCG +
Preference number: 5 (lower is better)
Translates to: IGQGVWRIWSSQRLC*RIGHVGAVKLKQLA
Trigger: CGCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368264.1
ENST00000484214.1
ENST00000622703.4
CDS CCA 90 bp CCTGTGGAAGCCCCGAACGTCAGATTGAAGGCACAGAAGTTATTCTaGGACCCAAAGAAGGCTCGGACAATGGGTGACTGGGGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: PVEAPNVRLKAQKLF*DPKKARTMGDWGRE
Trigger: CTCTCTTCCCCAGTCACCCATTGTCCGAGCCTTCTTTGGGTCCCAGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGCTTCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCAGCAGGAGGCTCCAGTaGACGCTCAGGGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: REMCGDARRQHQGDLINSSRRLQ*TLRVLW
Trigger: CCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGCT...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
CDS-3UTR CAA 90 bp TCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCTTCCCAAAGGCTTaGCTGCCGTATCGGACACGT +
Preference number: 5 (lower is better)
Translates to: SCLPGQPTSQNASHLGLQVFPKA*LPYRTR
Trigger: ACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGAC...TTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp ACTGGTCGCCACTGTGCAAAGCCTGATGGGAGGGAGCCCCACAGTAGCTGGTCCAATGAATCAGTGATGTaGTTCCAAGAGAAATCGGCC +
Preference number: 5 (lower is better)
Translates to: TGRHCAKPDGREPHSSWSNESVM*FQEKSA
Trigger: GGCCGATTTCTCTTGGAACAACATCACTGATTCATT...GGACCAGCTACTGTGGGGCTCCCTCCCATCAGGCTTTGCACAGTGGCGACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368264.1
ENST00000476177.6
CDS-3UTR CAA 90 bp GCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGTACTCTGAGTACTTCTaGTGGTGCAGCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: AGWNLMLQPPEFRGTARQYSEYF*WCSSRT
Trigger: GGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTA...CTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp AGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCGAGGCACATACTCTGAGTACTTCTaGTGGTGCAGCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: SEGAGWNLMLQPPEFRGTYSEYF*WCSSRT
Trigger: GGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTA...TGTGCCTCGAAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTTACTCTGAGTACTTCTaGTGGTGCAGCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFYSEYF*WCSSRT
Trigger: GGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTA...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: REMCGDARRQHQGDLINSGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp AGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAGAGTTTCATCAGGTCAGGAGATaGAGACCATCTCGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: RWGSEGAGWNLMLQPPEFHQVRR*RPSRVK
Trigger: TTTCACCCGAGATGGTCTCAATCTCCTGACCTGATG...AAACTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR CAA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCACACCCTCCAGGTaGAAGAACCCTCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: MCGDARRQHQGDLINSPVPTPSR*KNPPLG
Trigger: GCCAAGAGGAGGGTTCTTCAACCTGGAGGGTGTGGG...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS TCA 90 bp CTGCCATTGGCAAAAGTCCTGGTAGGGTCGTTCATGGGGTGGCCTTaGAATGTGGCACTCAGGGTGGCAGGATCCAATGAATCAGTGATG +
Preference number: 5 (lower is better)
Translates to: LPLAKVLVGSFMGWP*NVALRVAGSNESVM
Trigger: CATCACTGATTCATTGGATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACCCCATGAACGACCCTACCAGGACTTTTGCCAATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000476177.6
ENST00000479084.1
ENST00000484214.1
ENST00000497955.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS GCA 90 bp ATCGGCCAAGGAGTATGGAGGATATGGTCTTCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGTGCTGTCAAACTCAAGCAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: IGQGVWRIWSSQRLC*RIGHVGAVKLKQPG
Trigger: ACCAGGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS GCA 90 bp ATCGGCCAAGGAGTATGGAGGATATGGTCTTCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGTGCTGTCAAACTCAAGCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: IGQGVWRIWSSQRLC*RIGHVGAVKLKQLE
Trigger: CTCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGGCCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS-3UTR CAA 90 bp GGGTGGGGGAGAATAGGGTGGGAATCGGTAAAGGGAGGAAGATATTTTACTATAAGCAGGAGGCTCCAGTaGACGCTCAGGGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: GWGRIGWESVKGGRYFTISRRLQ*TLRVLW
Trigger: CCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGCT...TATAGTAAAATATCTTCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS-3UTR CAA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGC +
Preference number: 5 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPAVSDT*VLSNSS
Trigger: GCTTGAGTTTGACAGCACCAACGTGTCCGATACGGC...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGC +
Preference number: 5 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSAVSDT*VLSNSS
Trigger: GCTTGAGTTTGACAGCACCAACGTGTCCGATACGGC...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp CTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCAGCCCCGAACGTCAGATaGAAGGCACAGAAGTTATTC +
Preference number: 5 (lower is better)
Translates to: LPGQPTSQNASHLGLQVPAPNVR*KAQKLF
Trigger: GAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGC...TGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp AGGGAAATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCAGCTGAGGTAGTGTaGGTCCCAATAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: REMCGDARRQHQGDLINSPAEVV*VPIARA
Trigger: GGCCCTGGCTATTGGGACCAACACTACCTCAGCTGG...GCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACATTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS TCA 90 bp CCGAGACCACACCTCCCACTCACCCCCTACCAAGGCTTTCATATCTaGGTCTATTTCACCCACCCCCAGTCTTTAGTTCCACCCTCTAAT +
Preference number: 5 (lower is better)
Translates to: PRPHLPLTPYQGFHI*VYFTHPQSLVPPSN
Trigger: ATTAGAGGGTGGAACTAAAGACTGGGGGTGGGTGAAATAGACTCAGATATGAAAGCCTTGGTAGGGGGTGAGTGGGAGGTGTGGTCTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS GCA 90 bp GAAATCGGCCAAGGAGTATGGAGGATATGGTCTTCCCAAAGGCTTTaGTGCCGTATCGGACACGTTGGTGCTGTCAAACTCAAGCAGCCT +
Preference number: 5 (lower is better)
Translates to: EIGQGVWRIWSSQRL*CRIGHVGAVKLKQP
Trigger: AGGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGGCCGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS GCA 90 bp GAAATCGGCCAAGGAGTATGGAGGATATGGTCTTCCCAAAGGCTTTaGTGCCGTATCGGACACGTTGGTGCTGTCAAACTCAAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: EIGQGVWRIWSSQRL*CRIGHVGAVKLKQL
Trigger: CAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGGCCGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368264.1
ENST00000479084.1
ENST00000484214.1
ENST00000622703.4
CDS-3UTR CAA 90 bp CAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCAATGAATCAGTGATGTaGTTCCAAGAGAAATCGGCC +
Preference number: 5 (lower is better)
Translates to: QEGNTKGTLSIALSPARLNESVM*FQEKSA
Trigger: GGCCGATTTCTCTTGGAACAACATCACTGATTCATT...GAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp TCTTGCCTTCCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAATACTCTGAGTACTTCTaGTGGTGCAGCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: SCLPGQPTSQNASHLGLQYSEYF*WCSSRT
Trigger: GGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTA...TTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGGAAGGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp AGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAATAAATCTATTTTCTaGCCTTCCAGGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: RRQHQGDLINSPVPCPPPNKSIF*PSRAAN
Trigger: GTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTATT...TGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp GAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCCCTGCCCGCCTCCAAAATAAATCTATTTTCTaGCCTTCCAGGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: EGNTKGTLSIALSPARLQNKSIF*PSRAAN
Trigger: GTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTATT...TTGGAGGCGGGCAGGGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS TCA 90 bp CATGGGGTGGCCTTGAAATGTGGCACTCAGGGTGGCAGGATCCAATaGATCAGTGATGTTGTTCCAAGAGAAATCGGCCAAGGAGTATGG +
Preference number: 5 (lower is better)
Translates to: HGVALKCGTQGGRIQ*ISDVVPREIGQGVW
Trigger: CCATACTCCTTGGCCGATTTCTCTTGGAACAACATCACTGATTCATTGGATCCTGCCACCCTGAGTGCCACATTTCAAGGCCACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000476177.6
ENST00000479084.1
ENST00000484214.1
ENST00000497955.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS CCA 90 bp CCACCCTCTAATTGGGATGAACTCTCTCCTCTGCACTCTTCTCCTTaGTTCTCTCCCAACCTCCTCACCCTGGTAAAAACAAGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: PPSNWDELSPLHSSP*FSPNLLTLVKTRAE
Trigger: TTCTGCCCTTGTTTTTACCAGGGTGAGGAGGTTGGGAGAGAACCAAGGAGAAGAGTGCAGAGGAGAGAGTTCATCCCAATTAGAGGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS-3UTR CAA 90 bp AAAGCAAGATGGGGGAGTGAAGGGGCCGGCTGGAACTTGATGCTCCAACCTCCAAATGAATCAGTGATGTaGTTCCAAGAGAAATCGGCC +
Preference number: 5 (lower is better)
Translates to: KARWGSEGAGWNLMLQPPNESVM*FQEKSA
Trigger: GGCCGATTTCTCTTGGAACAACATCACTGATTCATT...TGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCCTTCACTCCCCCATCTTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCGCCCCGAACGTCAGATaGAAGGCACAGAAGTTATTC +
Preference number: 5 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSAPNVR*KAQKLF
Trigger: GAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGC...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp GATGCTCCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTACTCTGAGTACTTCTaGTGGTGCAGCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: DAPTSRVSRHSKTGSVMSYSEYF*WCSSRT
Trigger: GGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTA...GGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGGAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000472870.5
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp CCAGGGCAGCCAACCAGTCAGAATGCCTCTCATTTAGGCCTGCAAGTCCCATCCAATAAATCTATTTTCTaGCCTTCCAGGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: PGQPTSQNASHLGLQVPSNKSIF*PSRAAN
Trigger: GTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTATT...GGATGGGACTTGCAGGCCTAAATGAGAGGCATTCTGACTGGTTGGCTGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp CCAACCTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCATCAGGTCAGGAGATaGAGACCATCTCGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: PTSRVSRHSKTGSVMSFPHQVRR*RPSRVK
Trigger: TTTCACCCGAGATGGTCTCAATCTCCTGACCTGATG...AGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472870.5
ENST00000647767.1
CDS CCA 90 bp AGTGATGTTGTTCCAAGAGAAATCGGCCAAGGAGTATGGAGGATATaGTCTTCCCAAAGGCTTTGCTGCCGTATCGGACACGTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: SDVVPREIGQGVWRI*SSQRLCCRIGHVGA
Trigger: AGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGGCCGATTTCTCTTGGAACAACATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000479084.1
ENST00000484214.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS-3UTR CAA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCTACTCTGAGTACTTCTaGTGGTGCAGCAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: MCGDARRQHQGDLINSPVYSEYF*WCSSRT
Trigger: GGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTA...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS TCA 90 bp GGCCTTGAAATGTGGCACTCAGGGTGGCAGGATCCAATGAATCAGTaGTGTTGTTCCAAGAGAAATCGGCCAAGGAGTATGGAGGATATG +
Preference number: 5 (lower is better)
Translates to: GLEMWHSGWQDPMNQ*CCSKRNRPRSMEDM
Trigger: CATATCCTCCATACTCCTTGGCCGATTTCTCTTGGAACAACATCACTGATTCATTGGATCCTGCCACCCTGAGTGCCACATTTCAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000476177.6
ENST00000479084.1
ENST00000484214.1
ENST00000497955.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS GCA 90 bp CTGTCTCCACTGAGGGCAGAGACTGGGTCAGATTCATTAGCACAGTaGCTAGCTCTTAAACGACCCAAAGAAAGTGTTGCTAAATGGCAA +
Preference number: 5 (lower is better)
Translates to: LSPLRAETGSDSLAQ*LALKRPKESVAKWQ
Trigger: TTGCCATTTAGCAACACTTTCTTTGGGTCGTTTAAGAGCTAGGCACTGTGCTAATGAATCTGACCCAGTCTCTGCCCTCAGTGGAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484214.1
ENST00000497955.1
CDS-3UTR CAA 90 bp CTTCTTCTTCTTCCTTCTTTCTTCTTTTCTTCTTTCTCCAAGAAAAGCACACTGGGGGCCGGCTGGAACTaGATGCTCCAACCTCCAGAG +
Preference number: 5 (lower is better)
Translates to: LLLLPSFFFSSFSKKSTLGAGWN*MLQPPE
Trigger: CTCTGGAGGTTGGAGCATCAAGTTCCAGCCGGCCCC...CAGTGTGCTTTTCTTGGAGAAAGAAGAAAAGAAGAAAGAAGGAAGAAGAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000461597.1
CDS-3UTR CAA 90 bp TGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCCAATAAATCTATTTTCTaGCCTTCCAGGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: CVEMQEGNTKGTLSIALSNKSIF*PSRAAN
Trigger: GTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTATT...GGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp CTCCAGAGTTTCGAGGCACAGCAAGACAGGTTCAGTAATGTCCTTCCCTCCAGAAATAAATCTATTTTCTaGCCTTCCAGGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: LQSFEAQQDRFSNVLPSRNKSIF*PSRAAN
Trigger: GTTGGCTGCCCTGGAAGGCAAGAAAATAGATTTATT...TCTGGAGGGAAGGACATTACTGAACCTGTCTTGCTGTGCCTCGAAACTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp ATGTGTGGAGATGCAAGAAGGCAACACCAAGGGGACCTTATCAATAGCCCTGTCAATGAATCAGTGATGTaGTTCCAAGAGAAATCGGCC +
Preference number: 5 (lower is better)
Translates to: MCGDARRQHQGDLINSPVNESVM*FQEKSA
Trigger: GGCCGATTTCTCTTGGAACAACATCACTGATTCATT...GACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCCACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
CDS-3UTR CAA 90 bp GGGTGGGGGAGAATAGGGTGGGAATCGGTAAAGGGAGGAAGATATTTTACTATAAATGAATCAGTGATGTaGTTCCAAGAGAAATCGGCC +
Preference number: 5 (lower is better)
Translates to: GWGRIGWESVKGGRYFTINESVM*FQEKSA
Trigger: GGCCGATTTCTCTTGGAACAACATCACTGATTCATT...TATAGTAAAATATCTTCCTCCCTTTACCGATTCCCACCCTATTCTCCCCCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647767.1
CDS TCA 90 bp CTTAAACGACCCAAAGAAAGTGTTGCTAAATGGCAAATGGTTGAATaGGTTTTAGGTCCCAATGGTGTCCCACCTACATTCCTCACCCAT +
Preference number: 5 (lower is better)
Translates to: LKRPKESVAKWQMVE*VLGPNGVPPTFLTH
Trigger: ATGGGTGAGGAATGTAGGTGGGACACCATTGGGACCTAAAACTCATTCAACCATTTGCCATTTAGCAACACTTTCTTTGGGTCGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484214.1
ENST00000497955.1
CDS TCA 72 bp GCCCGGTTCCAGCCACCCTGCAAGGGTAGCGTTTCCTaGAACTTCTATCGCTGTAGCCCCAGGGCCCTCACC +
Preference number: 6 (lower is better)
Translates to: ARFQPPCKGSVS*NFYRCSPRALT
Trigger: GGTGAGGGCCCTGGGGCTACAGCGATAGAAGTTTCAGGAAACGCTACCCTTGCAGGGTGGCTGGAACCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS CAA 72 bp GCCCACACCCAGGAGCATCGACCAGCTGAGGTAGTGTaGGTCCCAATAGCCAGGGCCTGTGGAAGCCCCGAA +
Preference number: 6 (lower is better)
Translates to: AHTQEHRPAEVV*VPIARACGSPE
Trigger: TTCGGGGCTTCCACAGGCCCTGGCTATTGGGACCAACACTACCTCAGCTGGTCGATGCTCCTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000461597.1
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS GCA 72 bp AGCAGCTGGAGGGTGGGGGTAGGGTGGAACTGGGCTTaGCTCAGTTTTTCTCCCGAGACCACACCTCCCACT +
Preference number: 6 (lower is better)
Translates to: SSWRVGVGWNWA*LSFSPETTPPT
Trigger: AGTGGGAGGTGTGGTCTCGGGAGAAAAACTGAGGCAAGCCCAGTTCCACCCTACCCCCACCCTCCAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS CCA 72 bp GATAGCAGGAGGCTCCAGTTGACGCTCAGGGTGCTGTaGGGGGTGTTGGTGGCCACCATTACCACTGCCAGA +
Preference number: 6 (lower is better)
Translates to: DSRRLQLTLRVL*GVLVATITTAR
Trigger: TCTGGCAGTGGTAATGGTGGCCACCAACACCCCCCACAGCACCCTGAGCGTCAACTGGAGCCTCCTGCTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000479084.1
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS CCA 72 bp CGACCTGGAAGACGGCCGGTGCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTGAGGGGCAGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: RPGRRPVHIHRR*SAAPALRGSQG
Trigger: GCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612353.4
CDS CCA 72 bp TCCTCTGGAAGACGGCCGGTGCATATTCATCGTCGATaGAGTGCTGCTCCTGCATTGAGGGGCAGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: SSGRRPVHIHRR*SAAPALRGSQG
Trigger: GCCCTGACTGCCCCTCAATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368264.1
CDS CCA 72 bp GTATCGGACACGTTGGTGCTGTCAAACTCAAGCAGCTaGAGGGTGGGGGTAGGGTGGAACTGGGCTTGCCTC +
Preference number: 6 (lower is better)
Translates to: VSDTLVLSNSSS*RVGVGWNWACL
Trigger: GAGGCAAGCCCAGTTCCACCCTACCCCCACCCTCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS CAA 90 bp GGAGGATATGGTCTTCCCAAAGGCTTTGCTGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGCAGCTGGCGGGTCTTCTCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: GGYGLPKGFAAVSDT*VLSNSSSWRVFSPS
Trigger: GCTGGGGGAGAAGACCCGCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368264.1
ENST00000484214.1
ENST00000622703.4
CDS CAA 90 bp GGAGGATATGGTCTTCCCAAAGGCTTTGCTGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGCAGCTGGAGGGTGGGGGTAGGGTGG +
Preference number: 6 (lower is better)
Translates to: GGYGLPKGFAAVSDT*VLSNSSSWRVGVGW
Trigger: CCACCCTACCCCCACCCTCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS GCA 72 bp GCTCCACACATAGTGCAGTGTGGAATTGGTGCCCACTaGCCGTATATGAAGCAGGTTCTGCAGGGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: APHIVQCGIGAH*PYMKQVLQGAQ
Trigger: CTGGGCCCCCTGCAGAACCTGCTTCATATACGGGCAGTGGGCACCAATTCCACACTGCACTATGTGTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000479084.1
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS GCA 72 bp CCTCTCTCCAGGAAGCCTGACCTGGAAGACGGCCGGTaGATATTCATCGTCGATGGAGTGCTGCTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: PLSRKPDLEDGR*IFIVDGVLLLH
Trigger: ATGCAGGAGCAGCACTCCATCGACGATGAATATGCACCGGCCGTCTTCCAGGTCAGGCTTCCTGGAGAGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484214.1
ENST00000497955.1
CDS GCA 72 bp AGGGCTGAGTCGGGGTCCAGACATCACCCTCACATTTaGCCTACTCCACAATCCCGTCCCATGACCCATGAC +
Preference number: 6 (lower is better)
Translates to: RAESGSRHHPHI*PTPQSRPMTHD
Trigger: GTCATGGGTCATGGGACGGGATTGTGGAGTAGGGCAAATGTGAGGGTGATGTCTGGACCCCGACTCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS CCA 72 bp CCAGAGGCCCCAGGCTGCTCCACACATAGTGCAGTGTaGAATTGGTGCCCACTGCCCGTATATGAAGCAGGT +
Preference number: 6 (lower is better)
Translates to: PEAPGCSTHSAV*NWCPLPVYEAG
Trigger: ACCTGCTTCATATACGGGCAGTGGGCACCAATTCCACACTGCACTATGTGTGGAGCAGCCTGGGGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000479084.1
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS CCA 72 bp CTGTCAAACTCAAGCAGCTGGAGGGTGGGGGTAGGGTaGAACTGGGCTTGCCTCAGTTTTTCTCCCGAGACC +
Preference number: 6 (lower is better)
Translates to: LSNSSSWRVGVG*NWACLSFSPET
Trigger: GGTCTCGGGAGAAAAACTGAGGCAAGCCCAGTTCCACCCTACCCCCACCCTCCAGCTGCTTGAGTTTGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS CCA 72 bp GTCTTCCCAAAGGCTTTGCTGCCGTATCGGACACGTTaGTGCTGTCAAACTCAAGCAGCTGGAGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: VFPKALLPYRTR*CCQTQAAGGWG
Trigger: CCCCCACCCTCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS CAA 72 bp GGTCTTCCCAAAGGCTTTGCTGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGCAGCTGGAGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: GLPKGFAAVSDT*VLSNSSSWRVG
Trigger: CCCCACCCTCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479084.1
CDS GCA 72 bp CCAGGCTGCTCCACACATAGTGCAGTGTGGAATTGGTaGCCACTGCCCGTATATGAAGCAGGTTCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: PGCSTHSAVWNW*PLPVYEAGSAG
Trigger: CCCTGCAGAACCTGCTTCATATACGGGCAGTGGGCACCAATTCCACACTGCACTATGTGTGGAGCAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000479084.1
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS GCA 72 bp TTCCCAAAGGCTTTGCTGCCGTATCGGACACGTTGGTaGTGTCAAACTCAAGCAGCTGGCGGGTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: FPKALLPYRTRW*CQTQAAGGSSP
Trigger: GGGAGAAGACCCGCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368264.1
ENST00000484214.1
ENST00000622703.4
CDS CCA 72 bp GCCCCAGGCTGCTCCACACATAGTGCAGTGTGGAATTaGTGCCCACTGCCCGTATATGAAGCAGGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: APGCSTHSAVWN*CPLPVYEAGSA
Trigger: TGCAGAACCTGCTTCATATACGGGCAGTGGGCACCAATTCCACACTGCACTATGTGTGGAGCAGCCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000362007.6
ENST00000472870.5
ENST00000479084.1
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS CCA 72 bp GGCCTGACGTTTCTGCCACTGCTGTCGATGCTGATGTaGAACCTCTACTACATGTTCGTGGTGGAGCCGGAG +
Preference number: 6 (lower is better)
Translates to: GLTFLPLLSMLM*NLYYMFVVEPE
Trigger: CTCCGGCTCCACCACGAACATGTAGTAGAGGTTCCACATCAGCATCGACAGCAGTGGCAGAAACGTCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497831.1
CDS CAA 72 bp GGTCTTCCCAAAGGCTTTGCTGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGCAGCTGGCGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: GLPKGFAAVSDT*VLSNSSSWRVF
Trigger: GAAGACCCGCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368264.1
ENST00000484214.1
ENST00000622703.4
CDS TCA 72 bp ACCCTCACATTTGCCCTACTCCACAATCCCGTCCCATaGCCCATGACCATCTCCCACACCCTCCAGGTTGAA +
Preference number: 6 (lower is better)
Translates to: TLTFALLHNPVP*PMTISHTLQVE
Trigger: TTCAACCTGGAGGGTGTGGGAGATGGTCATGGGTCATGGGACGGGATTGTGGAGTAGGGCAAATGTGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614643.4
CDS CCA 72 bp GTCTTCCCAAAGGCTTTGCTGCCGTATCGGACACGTTaGTGCTGTCAAACTCAAGCAGCTGGCGGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: VFPKALLPYRTR*CCQTQAAGGSS
Trigger: AGAAGACCCGCCAGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368264.1
ENST00000484214.1
ENST00000622703.4
CDS CAA 72 bp GTCTGGACTCAGCCCTCCTCTTGGCCCCTAGCCCCCTaGCAGATCTCCATCTGCCAGAGTGTAAGTCATATT +
Preference number: 6 (lower is better)
Translates to: VWTQPSSWPLAP*QISICQSVSHI
Trigger: AATATGACTTACACTCTGGCAGATGGAGATCTGCAAGGGGGCTAGGGGCCAAGAGGAGGGCTGAGTCCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484214.1
ENST00000497955.1
CDS TCA 72 bp AATAGCCAGGGCCTGTGGAAGCCCCGAACGTCAGATTaGAGGCACAGAAGTTATTCTGGGACCCAAAGAAGG +
Preference number: 6 (lower is better)
Translates to: NSQGLWKPRTSD*RHRSYSGTQRR
Trigger: CCTTCTTTGGGTCCCAGAATAACTTCTGTGCCTTCAATCTGACGTTCGGGGCTTCCACAGGCCCTGGCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000362007.6
ENST00000481050.1
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS CAA 90 bp AGAAATCGGCCAAGGAGTATGGAGGATATGGTCTTCCCAAAGGCTTaGCTGCCGTATCGGACACGTTGGTGCTGTCAAACTCAAGCAGCC +
Preference number: 6 (lower is better)
Translates to: RNRPRSMEDMVFPKA*LPYRTRWCCQTQAA
Trigger: GGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGGCCGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS CAA 90 bp GGAGGATATGGTCTTCCCAAAGGCTTTGCTGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGCAGCCTGGTAAAAACAAGGGCAGAA +
Preference number: 6 (lower is better)
Translates to: GGYGLPKGFAAVSDT*VLSNSSSLVKTRAE
Trigger: TTCTGCCCTTGTTTTTACCAGGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS CAA 90 bp AGAAATCGGCCAAGGAGTATGGAGGATATGGTCTTCCCAAAGGCTTaGCTGCCGTATCGGACACGTTGGTGCTGTCAAACTCAAGCAGCT +
Preference number: 6 (lower is better)
Translates to: RNRPRSMEDMVFPKA*LPYRTRWCCQTQAA
Trigger: AGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGGCCGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368264.1
ENST00000479084.1
ENST00000484214.1
ENST00000622703.4
CDS GCA 72 bp GGAGTATGGAGGATATGGTCTTCCCAAAGGCTTTGCTaGCGTATCGGACACGTTGGTGCTGTCAAACTCAAG +
Preference number: 6 (lower is better)
Translates to: GVWRIWSSQRLC*RIGHVGAVKLK
Trigger: CTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000479084.1
ENST00000484214.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS GCA 72 bp CAAGGAGTATGGAGGATATGGTCTTCCCAAAGGCTTTaGTGCCGTATCGGACACGTTGGTGCTGTCAAACTC +
Preference number: 6 (lower is better)
Translates to: QGVWRIWSSQRL*CRIGHVGAVKL
Trigger: GAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000479084.1
ENST00000484214.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS CCA 72 bp GTTCCAAGAGAAATCGGCCAAGGAGTATGGAGGATATaGTCTTCCCAAAGGCTTTGCTGCCGTATCGGACAC +
Preference number: 6 (lower is better)
Translates to: VPREIGQGVWRI*SSQRLCCRIGH
Trigger: GTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGGCCGATTTCTCTTGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000479084.1
ENST00000484214.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS CAA 72 bp GGTCTTCCCAAAGGCTTTGCTGCCGTATCGGACACGTaGGTGCTGTCAAACTCAAGCAGCCTGGTAAAAACA +
Preference number: 6 (lower is better)
Translates to: GLPKGFAAVSDT*VLSNSSSLVKT
Trigger: TGTTTTTACCAGGCTGCTTGAGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000362007.6
ENST00000612353.4
ENST00000614643.4
ENST00000647767.1
CDS CAA 72 bp CCAAGGAGTATGGAGGATATGGTCTTCCCAAAGGCTTaGCTGCCGTATCGGACACGTTGGTGCTGTCAAACT +
Preference number: 6 (lower is better)
Translates to: PRSMEDMVFPKA*LPYRTRWCCQT
Trigger: AGTTTGACAGCACCAACGTGTCCGATACGGCAGCAAAGCCTTTGGGAAGACCATATCCTCCATACTCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000479084.1
ENST00000484214.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS TCA 72 bp ATGTGGCACTCAGGGTGGCAGGATCCAATGAATCAGTaGTGTTGTTCCAAGAGAAATCGGCCAAGGAGTATG +
Preference number: 6 (lower is better)
Translates to: MWHSGWQDPMNQ*CCSKRNRPRSM
Trigger: CATACTCCTTGGCCGATTTCTCTTGGAACAACATCACTGATTCATTGGATCCTGCCACCCTGAGTGCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000476177.6
ENST00000479084.1
ENST00000484214.1
ENST00000497955.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS TCA 72 bp GCCTTGAAATGTGGCACTCAGGGTGGCAGGATCCAATaGATCAGTGATGTTGTTCCAAGAGAAATCGGCCAA +
Preference number: 6 (lower is better)
Translates to: ALKCGTQGGRIQ*ISDVVPREIGQ
Trigger: TTGGCCGATTTCTCTTGGAACAACATCACTGATTCATTGGATCCTGCCACCCTGAGTGCCACATTTCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000362007.6
ENST00000368264.1
ENST00000476177.6
ENST00000479084.1
ENST00000484214.1
ENST00000497955.1
ENST00000612353.4
ENST00000614643.4
ENST00000622703.4
ENST00000647767.1
CDS TCA 72 bp CCCAAAGAAAGTGTTGCTAAATGGCAAATGGTTGAATaGGTTTTAGGTCCCAATGGTGTCCCACCTACATTC +
Preference number: 6 (lower is better)
Translates to: PKESVAKWQMVE*VLGPNGVPPTF
Trigger: GAATGTAGGTGGGACACCATTGGGACCTAAAACTCATTCAACCATTTGCCATTTAGCAACACTTTCTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484214.1
ENST00000497955.1