RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLIS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000107249

Ensembl transcript IDs: ENST00000324333.14, ENST00000381971.8, ENST00000461870.5, ENST00000462164.5, ENST00000463680.6, ENST00000464391.2, ENST00000465708.5, ENST00000467497.6, ENST00000469833.1, ENST00000471664.1, ENST00000473846.5, ENST00000477901.5, ENST00000478315.5, ENST00000478844.5, ENST00000481827.5, ENST00000490709.1, ENST00000491889.6, ENST00000645097.1, ENST00000645252.2, ENST00000682749.1, ENST00000682846.1, ENST00000682864.1, ENST00000683926.1, ENST00000683998.1

Found 768 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGCCTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTaGACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGT +
Preference number: 1 (lower is better)
Translates to: KPAAIRKDPRCGKQG*TGSCGQHALSEIKC
Trigger: ACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 90 bp GAGGTAAGAAAGGGGCAGGGTTACTGTGAGAGGCCACAGGAAGACTaGAGCCTGGTTCACAAGCAGCTCCTCTCAAAGAGGGAGGTGATG +
Preference number: 1 (lower is better)
Translates to: EVRKGQGYCERPQED*SLVHKQLLSKREVM
Trigger: CATCACCTCCCTCTTTGAGAGGAGCTGCTTGTGAACCAGGCTCCAGTCTTCCTGTGGCCTCTCACAGTAACCCTGCCCCTTTCTTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR GCA 90 bp TGCGGGAGGTGCCCACTCCATTTCCCTCAGGTAACCTTTGCTAACTaGAAAACTAACATGCTAGAGGTGGGGCCAGGCAGAACCACAGCT +
Preference number: 1 (lower is better)
Translates to: CGRCPLHFPQVTFAN*KTNMLEVGPGRTTA
Trigger: AGCTGTGGTTCTGCCTGGCCCCACCTCTAGCATGTTAGTTTTGCAGTTAGCAAAGGTTACCTGAGGGAAATGGAGTGGGCACCTCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 90 bp CAAGGGAAGCTGGCACATGACTCAGTCTGTCCCAGTTCTCACATCTaGCACTTCTCTGGGTGCAGCACCAGAGTGGAGGCAATGGGTAAA +
Preference number: 1 (lower is better)
Translates to: QGKLAHDSVCPSSHI*HFSGCSTRVEAMGK
Trigger: TTTACCCATTGCCTCCACTCTGGTGCTGCACCCAGAGAAGTGCCAGATGTGAGAACTGGGACAGACTGAGTCATGTGCCAGCTTCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 90 bp CAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTCCACATTaGTTTCCTGCTGAGGAAGGAGGGCTGCAGGTGCCTCTATTGCTT +
Preference number: 1 (lower is better)
Translates to: QHALSEIKCPSGAPH*FPAEEGGLQVPLLL
Trigger: AAGCAATAGAGGCACCTGCAGCCCTCCTTCCTCAGCAGGAAATCAATGTGGAGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 90 bp AGCATAGTGTGTGTAGTCTGGAAGGCATCTGAACGTGTCCTATCCTaGGGCTGCAATCTCAAGCCTGCAGCTATCAGGAAAGACCCACGG +
Preference number: 1 (lower is better)
Translates to: SIVCVVWKASERVLS*GCNLKPAAIRKDPR
Trigger: CCGTGGGTCTTTCCTGATAGCTGCAGGCTTGAGATTGCAGCCTCAGGATAGGACACGTTCAGATGCCTTCCAGACTACACACACTATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR GCA 90 bp GTCAACTCAGGAAGGTTCCAGCTACAGGACTGTTGGTGCGGGAGGTaGCCACTCCATTTCCCTCAGGTAACCTTTGCTAACTGCAAAACT +
Preference number: 1 (lower is better)
Translates to: VNSGRFQLQDCWCGR*PLHFPQVTFANCKT
Trigger: AGTTTTGCAGTTAGCAAAGGTTACCTGAGGGAAATGGAGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTGGAACCTTCCTGAGTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR GCA 90 bp CATGACTCAGTCTGTCCCAGTTCTCACATCTGGCACTTCTCTGGGTaGAGCACCAGAGTGGAGGCAATGGGTAAACCAGTCAAACAACAT +
Preference number: 1 (lower is better)
Translates to: HDSVCPSSHIWHFSG*STRVEAMGKPVKQH
Trigger: ATGTTGTTTGACTGGTTTACCCATTGCCTCCACTCTGGTGCTGCACCCAGAGAAGTGCCAGATGTGAGAACTGGGACAGACTGAGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 90 bp CTACCTTCCCAAGATGATCAGACAATGGCGGCTGGTGGGGATATATaGACCACAGTCAGGAAGAGGGTAAGAGGGATGCAAAAAGAGGGT +
Preference number: 1 (lower is better)
Translates to: LPSQDDQTMAAGGDI*TTVRKRVRGMQKEG
Trigger: ACCCTCTTTTTGCATCCCTCTTACCCTCTTCCTGACTGTGGTTCATATATCCCCACCAGCCGCCATTGTCTGATCATCTTGGGAAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 90 bp AAGACTGGAGCCTGGTTCACAAGCAGCTCCTCTCAAAGAGGGAGGTaGTGTCCATGGTTTCTAAAGTTGAGCTTCTGTCTTGTCCTCCTT +
Preference number: 1 (lower is better)
Translates to: KTGAWFTSSSSQRGR*CPWFLKLSFCLVLL
Trigger: AAGGAGGACAAGACAGAAGCTCAACTTTAGAAACCATGGACATCACCTCCCTCTTTGAGAGGAGCTGCTTGTGAACCAGGCTCCAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR GCA 90 bp ATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCACAAAGTCTaGAGGAAGGGTGGTACTTTACAAGCAGCCTTGGAGTTCACTTGT +
Preference number: 1 (lower is better)
Translates to: MLGHLFRPSDTTHKV*RKGGTLQAALEFTC
Trigger: ACAAGTGAACTCCAAGGCTGCTTGTAAAGTACCACCCTTCCTGCAGACTTTGTGGGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 90 bp CTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCAAGATaGTCAGACAATGGCGGCTGGTGGGGATATATGAACCACAGTCAG +
Preference number: 1 (lower is better)
Translates to: LSVDFSRTVTSTFPR*SDNGGWWGYMNHSQ
Trigger: CTGACTGTGGTTCATATATCCCCACCAGCCGCCATTGTCTGATCATCTTGGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 90 bp AAGACTCTCGAATCTAAGCATAGTGTGTGTAGTCTGGAAGGCATCTaGACGTGTCCTATCCTGAGGCTGCAATCTCAAGCCTGCAGCTAT +
Preference number: 1 (lower is better)
Translates to: KTLESKHSVCSLEGI*TCPILRLQSQACSY
Trigger: ATAGCTGCAGGCTTGAGATTGCAGCCTCAGGATAGGACACGTTCAGATGCCTTCCAGACTACACACACTATGCTTAGATTCGAGAGTCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 90 bp GCATGTTGGAATGAACTCTGGAATCAGGTAGAATACTTCCGCTTGTaGGACTGTGGAGGGAGACTGGAAGGACCTGTCAGTATACAAACT +
Preference number: 1 (lower is better)
Translates to: ACWNELWNQVEYFRL*DCGGRLEGPVSIQT
Trigger: AGTTTGTATACTGACAGGTCCTTCCAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTCATTCCAACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 90 bp CGACCCACAAAGTCTGCAGGAAGGGTGGTACTTTACAAGCAGCCTTaGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAG +
Preference number: 1 (lower is better)
Translates to: RPTKSAGRVVLYKQP*SSLVKEAWCASFVK
Trigger: CTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAAGGCTGCTTGTAAAGTACCACCCTTCCTGCAGACTTTGTGGGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 90 bp GAGGTGGGGCCAGGCAGAACCACAGCTGTGCAAAATGTCTATAGCTaGGGTGATTACAATAATAATGATTTCCATCCAAAGCACAGACCT +
Preference number: 1 (lower is better)
Translates to: EVGPGRTTAVQNVYS*GDYNNNDFHPKHRP
Trigger: AGGTCTGTGCTTTGGATGGAAATCATTATTATTGTAATCACCCCAGCTATAGACATTTTGCACAGCTGTGGTTCTGCCTGGCCCCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 90 bp CAAAACCCACACTTGGTTCTTCATTCACCTCATTCTACTGCATGTTaGAATGAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGAC +
Preference number: 1 (lower is better)
Translates to: QNPHLVLHSPHSTAC*NELWNQVEYFRLWD
Trigger: GTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTCATTCCAACATGCAGTAGAATGAGGTGAATGAAGAACCAAGTGTGGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 90 bp GTGGAGAGAAGTGTAGGGAAGAGACAGACAGATGAGTGGATATCCTaGAAAACGTTAGTAAAATCTGAGCACTGGAAGTCAAGTATCACT +
Preference number: 1 (lower is better)
Translates to: VERSVGKRQTDEWIS*KTLVKSEHWKSSIT
Trigger: AGTGATACTTGACTTCCAGTGCTCAGATTTTACTAACGTTTTTCAGGATATCCACTCATCTGTCTGTCTCTTCCCTACACTTCTCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 90 bp TTTAAAGTGGCTAACTCATCTCTTTTGCAGACTTTGACGTCTACGTaGAAGCTTTTCTTAGAATACAGCCCACTACTCAGAGAAACTAGA +
Preference number: 1 (lower is better)
Translates to: FKVANSSLLQTLTST*KLFLEYSPLLRETR
Trigger: TCTAGTTTCTCTGAGTAGTGGGCTGTATTCTAAGAAAAGCTTTCACGTAGACGTCAAAGTCTGCAAAAGAGATGAGTTAGCCACTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 90 bp AGTGGAAAGGAAAGCCTATGTTTATTGTATATGTTTGACTATAACTaGAAGGATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGA +
Preference number: 1 (lower is better)
Translates to: SGKESLCLLYMFDYN*KDVYQNSTHGRLWG
Trigger: TCCCCAGAGACGACCATGGGTGGAATTTTGATATACATCCTTCCAGTTATAGTCAAACATATACAATAAACATAGGCTTTCCTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
3UTR TCA 90 bp ATCGGCCCCATATCCAGTATGATATATGCAGTTCATTTCTCTACGTaGGTGTATATAACTATGTACAAGAGTCTGTGTGATTTATGGAAA +
Preference number: 1 (lower is better)
Translates to: IGPISSMIYAVHFST*VYITMYKSLCDLWK
Trigger: TTTCCATAAATCACACAGACTCTTGTACATAGTTATATACACTCACGTAGAGAAATGAACTGCATATATCATACTGGATATGGGGCCGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGGGGCAGGGTTACTGTaGGAGGCCACAGGAAGACTG +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPGAGLL*EATGRL
Trigger: CAGTCTTCCTGTGGCCTCTCACAGTAACCCTGCCCC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTTGTTGGTGCGGGAGGTaGCCACTCCATTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPCWCGR*PLHFPQ
Trigger: CTGAGGGAAATGGAGTGGGCACCTCCCGCACCAACA...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGGGTCCTTTAAGGGTTaGCAGCCAGGAAGTAACAGG +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPGSFKG*QPGSNR
Trigger: CCTGTTACTTCCTGGCTGTCAACCCTTAAAGGACCC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGAATACTTCCGCTTGTaGGACTGTGGAGGGAGACTG +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPEYFRL*DCGGRL
Trigger: CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTAGGAAGACTGGAGCCTaGTTCACAAGCAGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPRKTGA*FTSSSS
Trigger: AGAGGAGCTGCTTGTGAACCAGGCTCCAGTCTTCCT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGTTGAGACCACACTATaGTTTGGACATGGATTTCCC +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPVETTL*FGHGFP
Trigger: GGGAAATCCATGTCCAAAGCATAGTGTGGTCTCAAC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTTGCACATCATTTCACTaGGGTCCTTTAAGGGTTGAC +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPCTSFH*GPLRVD
Trigger: GTCAACCCTTAAAGGACCCCAGTGAAATGATGTGCA...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTCTGAGGAAGGAGGGCTaGAGGTGCCTCTATTGCTTA +
Preference number: 2 (lower is better)
Translates to: TGSCGQHALSEIKCPSGALRKEG*RCLYCL
Trigger: TAAGCAATAGAGGCACCTGCAGCCCTCCTTCCTCAG...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTACTATGCTTTGGACATaGATTTCCCTTGTTGTGCCT +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPTMLWT*ISLVVP
Trigger: AGGCACAACAAGGGAAATCCATGTCCAAAGCATAGT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGAGGGAAGCTGGCACATaGCTCAGTCTGTCCCAGTTC +
Preference number: 2 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLREAGT*LSLSQF
Trigger: GAACTGGGACAGACTGAGTCATGTGCCAGCTTCCCT...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTGTTGGTGCGGGAGGTaGCCACTCCATTTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTCWCGR*PLHFPQ
Trigger: CTGAGGGAAATGGAGTGGGCACCTCCCGCACCAACA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCTACAGGACTGTTGGTaGGGGAGGTGCCCACTCCAT +
Preference number: 2 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTLQDCW*GRCPLH
Trigger: ATGGAGTGGGCACCTCCCGCACCAACAGTCCTGTAG...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGTAAAATCTGAGCACTaGAAGTCAAGTATCACTAGG +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPVKSEH*KSSITR
Trigger: CCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGTAACCTTTGCTAACTaGAAAACTAACATGCTAGAG +
Preference number: 2 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPVTFAN*KTNMLE
Trigger: CTCTAGCATGTTAGTTTTGCAGTTAGCAAAGGTTAC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGGAGTTTCTAAGAGTTaGGACCACACTATGCTTTGG +
Preference number: 2 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAGVSKS*DHTMLW
Trigger: CCAAAGCATAGTGTGGTCTCAACTCTTAGAAACTCC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTTCCCTTGTTGTGCCTaGCTTTGCATCAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTFPCCA*LCIRSS
Trigger: GCTGCTCCTGATGCAAAGCCAGGCACAACAAGGGAA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTCAGACAATGGCGGCTaGTGGGGATATATGAACCAC +
Preference number: 2 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLSDNGG*WGYMNH
Trigger: GTGGTTCATATATCCCCACCAGCCGCCATTGTCTGA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTAAGATGATCAGACAATaGCGGCTGGTGGGGATATAT +
Preference number: 2 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAKMIRQ*RLVGIY
Trigger: ATATATCCCCACCAGCCGCCATTGTCTGATCATCTT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGTCAAGGTCCTGGGTGTaGAGGAGTGGCCAAGAGAGC +
Preference number: 2 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQSRSWV*RSGQES
Trigger: GCTCTCTTGGCCACTCCTGCACACCCAGGACCTTGA...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCCAGCTACAGGACTGTTaGTGCGGGAGGTGCCCACTC +
Preference number: 2 (lower is better)
Translates to: KRIASFCRLFENCHLYLPQLQDC*CGRCPL
Trigger: GAGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTG...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTTTTCCAAGGGAAGCTaGCACATGACTCAGTCTGTC +
Preference number: 2 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLFSKGS*HMTQSV
Trigger: GACAGACTGAGTCATGTGCCAGCTTCCCTTGGAAAA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCGACAATGGCGGCTGGTaGGGATATATGAACCACAGT +
Preference number: 2 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTDNGGW*GYMNHS
Trigger: ACTGTGGTTCATATATCCCCACCAGCCGCCATTGTC...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCTCAAGGTCCTGGGTGTaGAGGAGTGGCCAAGAGAGC +
Preference number: 2 (lower is better)
Translates to: KRIASFCRLFENCHLYLPSRSWV*RSGQES
Trigger: GCTCTCTTGGCCACTCCTGCACACCCAGGACCTTGA...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTCTGCCATTCAGTCCTaGCTTCTGAAAGAACATCAG +
Preference number: 2 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLSAIQS*LLKEHQ
Trigger: CTGATGTTCTTTCAGAAGGCAGGACTGAATGGCAGA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTGCACATCATTTCACTaGGGTCCTTTAAGGGTTGAC +
Preference number: 2 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLCTSFH*GPLRVD
Trigger: GTCAACCCTTAAAGGACCCCAGTGAAATGATGTGCA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGTAAAATCTGAGCACTaGAAGTCAAGTATCACTAGG +
Preference number: 2 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAVKSEH*KSSITR
Trigger: CCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTAACGTTAGTAAAATCTaGGCACTGGAAGTCAAGTAT +
Preference number: 2 (lower is better)
Translates to: TGSCGQHALSEIKCPSGANVSKI*ALEVKY
Trigger: ATACTTGACTTCCAGTGCTCAGATTTTACTAACGTT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGCAGGGCCCGCTGATTaGGCTGACATCCTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFAGPAD*ADILPQ
Trigger: TTGAGGAAGGATGTCAGCCCAATCAGCGGGCCCTGC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGCAGGGCCCGCTGATTaGGCTGACATCCTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCAGPAD*ADILPQ
Trigger: TTGAGGAAGGATGTCAGCCCAATCAGCGGGCCCTGC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGTTCCCTTGTTGTGCCTaGCTTTGCATCAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQFPCCA*LCIRSS
Trigger: GCTGCTCCTGATGCAAAGCCAGGCACAACAAGGGAA...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CAA 90 bp ACGACCCACAAAGTCTGCAGGAAGGGTGGTACTTTACAAGCAGCCTaGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAA +
Preference number: 2 (lower is better)
Translates to: TTHKVCRKGGTLQAA*EFTCKGSLVCIFCK
Trigger: TTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAAGGCTGCTTGTAAAGTACCACCCTTCCTGCAGACTTTGTGGGTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCAGGGTGAGGATTAGGTaGGGCAGGTCACTATGCCTC +
Preference number: 2 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCRVRIR*GRSLCL
Trigger: GAGGCATAGTGACCTGCCTCACCTAATCCTCACCCT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTTTGAACACAGTCTTTaGGGTGGAGTTACTAAACAG +
Preference number: 2 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLFEHSL*GGVTKQ
Trigger: CTGTTTAGTAACTCCACCTCAAAGACTGTGTTCAAA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTAGGGAAGCTGGCACATaGCTCAGTCTGTCCCAGTTC +
Preference number: 2 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFREAGT*LSLSQF
Trigger: GAACTGGGACAGACTGAGTCATGTGCCAGCTTCCCT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTTCTGCCATTCAGTCCTaGCTTCTGAAAGAACATCAG +
Preference number: 2 (lower is better)
Translates to: VDSQEVTGIQESEALNSLSAIQS*LLKEHQ
Trigger: CTGATGTTCTTTCAGAAGGCAGGACTGAATGGCAGA...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTACAAGGATAGGCTGCTaGCATATAAAACCTTATTTT +
Preference number: 2 (lower is better)
Translates to: TGSCGQHALSEIKCPSGATRIGC*HIKPYF
Trigger: AAAATAAGGTTTTATATGCCAGCAGCCTATCCTTGT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTCCAGGCCTTCAAACTaGAACTCAGAAAAAGAATTG +
Preference number: 2 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLSRPSN*NSEKEL
Trigger: CAATTCTTTTTCTGAGTTCCAGTTTGAAGGCCTGGA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGCTGTGTCTTTGGGACTaGCCAATTTTTATAGCTGAT +
Preference number: 2 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLLCLWD*PIFIAD
Trigger: ATCAGCTATAAAAATTGGCCAGTCCCAAAGACACAG...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGGGTCCTTTAAGGGTTaGCAGCCAGGAAGTAACAGG +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQGSFKG*QPGSNR
Trigger: CCTGTTACTTCCTGGCTGTCAACCCTTAAAGGACCC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTCTGGGGCTCCACATTaGTTTCCTGCTGAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQSGAPH*FPAEEG
Trigger: TCCTTCCTCAGCAGGAAATCAATGTGGAGCCCCAGA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCAGGTATCCAGGAGAGTaGGGCTCTAAATTCCCTTTG +
Preference number: 2 (lower is better)
Translates to: KRIASFCRLFENCHLYLPRYPGE*GSKFPL
Trigger: CAAAGGGAATTTAGAGCCTCACTCTCCTGGATACCT...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCAACGTTAGTAAAATCTaGGCACTGGAAGTCAAGTAT +
Preference number: 2 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTNVSKI*ALEVKY
Trigger: ATACTTGACTTCCAGTGCTCAGATTTTACTAACGTT...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGGATTTCCCTTGTTGTaGCTGGCTTTGCATCAGGAG +
Preference number: 2 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCGFPLL*LALHQE
Trigger: CTCCTGATGCAAAGCCAGGCACAACAAGGGAAATCC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTGTTGGAATGAACTCTaGAATCAGGTAGAATACTTC +
Preference number: 2 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTCWNEL*NQVEYF
Trigger: GAAGTATTCTACCTGATTCCAGAGTTCATTCCAACA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGCTCTTTTGCAGACTTTaGCGTCTACGTGAAAGCTTT +
Preference number: 2 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQLFCRL*RLRESF
Trigger: AAAGCTTTCACGTAGACGTCAAAGTCTGCAAAAGAG...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGTACGAAAACAAAAGGTaGCAAGCAACATCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQYENKR*QATSRS
Trigger: GGACCTTGATGTTGCTTGCCACCTTTTGTTTTCGTA...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTTTTCCAAGGGAAGCTaGCACATGACTCAGTCTGTC +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQFSKGS*HMTQSV
Trigger: GACAGACTGAGTCATGTGCCAGCTTCCCTTGGAAAA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGGAGTTTCTAAGAGTTaGGACCACACTATGCTTTGG +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQGVSKS*DHTMLW
Trigger: CCAAAGCATAGTGTGGTCTCAACTCTTAGAAACTCC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAATCTACCTTCCCAAGATaGTCAGACAATGGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: TENDFLFRLDIFDQVLCESTFPR*SDNGGW
Trigger: CCAGCCGCCATTGTCTGATCATCTTGGGAAGGTAGA...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGCGACCAAGTGCTATGTaGAAATTCCAGGCCTTCAAA +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQRPSAM*KFQAFK
Trigger: TTTGAAGGCCTGGAATTTTCACATAGCACTTGGTCG...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTCTCAAAGAGGGAGGTaGTGTCCATGGTTTCTAAAG +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQSQRGR*CPWFLK
Trigger: CTTTAGAAACCATGGACATCACCTCCCTCTTTGAGA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAATGTTGTGCCTGGCTTTaGATCAGGAGCAGCAAGGGT +
Preference number: 2 (lower is better)
Translates to: TENDFLFRLDIFDQVLCECCAWL*IRSSKG
Trigger: ACCCTTGCTGCTCCTGATGCAAAGCCAGGCACAACA...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGTTGAGACCACACTATaGTTTGGACATGGATTTCCC +
Preference number: 2 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCVETTL*FGHGFP
Trigger: GGGAAATCCATGTCCAAAGCATAGTGTGGTCTCAAC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCAAGATGATCAGACAATaGCGGCTGGTGGGGATATAT +
Preference number: 2 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCKMIRQ*RLVGIY
Trigger: ATATATCCCCACCAGCCGCCATTGTCTGATCATCTT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTATGCCTCTCGTAATTaGGGTCTTTTTCCCTGTTTG +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQYASRN*GLFPCL
Trigger: CAAACAGGGAAAAAGACCTCAATTACGAGAGGCATA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAGGATTTCCCTTGTTGTaGCTGGCTTTGCATCAGGAG +
Preference number: 2 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEGFPLL*LALHQE
Trigger: CTCCTGATGCAAAGCCAGGCACAACAAGGGAAATCC...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTACGAAAACAAAAGGTaGCAAGCAACATCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFYENKR*QATSRS
Trigger: GGACCTTGATGTTGCTTGCCACCTTTTGTTTTCGTA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGAAAAGACAGTCCTCCTaGTCACATAGTCCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQKRQSS*SHSPGK
Trigger: TTTTCCTGGACTATGTGACCAGGAGGACTGTCTTTT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGACCACACTATGCTTTaGACATGGATTTCCCTTGTT +
Preference number: 2 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFDHTML*TWISLV
Trigger: AACAAGGGAAATCCATGTCCAAAGCATAGTGTGGTC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAGACAATGGCGGCTGGTaGGGATATATGAACCACAGT +
Preference number: 2 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEDNGGW*GYMNHS
Trigger: ACTGTGGTTCATATATCCCCACCAGCCGCCATTGTC...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTTTGAACACAGTCTTTaGGGTGGAGTTACTAAACAG +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQFEHSL*GGVTKQ
Trigger: CTGTTTAGTAACTCCACCTCAAAGACTGTGTTCAAA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACCAGAGTGGAGGCAATaGGTAAACCAGTCAAACAAC +
Preference number: 2 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEPEWRQ*VNQSNN
Trigger: GTTGTTTGACTGGTTTACCCATTGCCTCCACTCTGG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGCTGTGTCTTTGGGACTaGCCAATTTTTATAGCTGAT +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQLCLWD*PIFIAD
Trigger: ATCAGCTATAAAAATTGGCCAGTCCCAAAGACACAG...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAACTTACTGTGTCTTTaGGACTGGCCAATTTTTATA +
Preference number: 2 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQNLLCL*DWPIFI
Trigger: TATAAAAATTGGCCAGTCCCAAAGACACAGTAAGTT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGATATTTTCGACCAAGTaGTATGTGAAAATTCCAGGC +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQIFSTK*YVKIPG
Trigger: GCCTGGAATTTTCACATAGCACTTGGTCGAAAATAT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTGTTGGAATGAACTCTaGAATCAGGTAGAATACTTC +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQCWNEL*NQVEYF
Trigger: GAAGTATTCTACCTGATTCCAGAGTTCATTCCAACA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAATATGCCTCTCGTAATTaGGGTCTTTTTCCCTGTTTG +
Preference number: 2 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEYASRN*GLFPCL
Trigger: CAAACAGGGAAAAAGACCTCAATTACGAGAGGCATA...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGACAAGGATAGGCTGCTaGCATATAAAACCTTATTTT +
Preference number: 2 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQTRIGC*HIKPYF
Trigger: AAAATAAGGTTTTATATGCCAGCAGCCTATCCTTGT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR GCA 72 bp GCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTaGACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: AIRKDPRCGKQG*TGSCGQHALSE
Trigger: CTCAGAGAGAGCATGCTGGCCACAGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTCCAGCTACAGGACTGTaGGTGCGGGAGGTGCCCACT +
Preference number: 3 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAPATGL*VREVPT
Trigger: AGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTGG...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTCATATGTTAGGCCACTaGTTTAGGCCAAGTGACACG +
Preference number: 3 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPHMLGH*FRPSDT
Trigger: CGTGTCACTTGGCCTAAACAAGTGGCCTAACATATG...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR GCA 72 bp GTCAACTCAGGAAGGTTCCAGCTACAGGACTGTTGGTaGGGGAGGTGCCCACTCCATTTCCCTCAGGTAACC +
Preference number: 3 (lower is better)
Translates to: VNSGRFQLQDCW*GRCPLHFPQVT
Trigger: GGTTACCTGAGGGAAATGGAGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTGGAACCTTCCTGAGTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 72 bp AAGGGGCAGGGTTACTGTGAGAGGCCACAGGAAGACTaGAGCCTGGTTCACAAGCAGCTCCTCTCAAAGAGG +
Preference number: 3 (lower is better)
Translates to: KGQGYCERPQED*SLVHKQLLSKR
Trigger: CCTCTTTGAGAGGAGCTGCTTGTGAACCAGGCTCCAGTCTTCCTGTGGCCTCTCACAGTAACCCTGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTCCATGGTTTCTAAAGTaGAGCTTCTGTCTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPPWFLK*SFCLVL
Trigger: GAGGACAAGACAGAAGCTCAACTTTAGAAACCATGG...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 72 bp GGGCTGCACTGGGTCCTGTGGCCAGCATGCTCTCTCTaGGATAAAATGTCCCTCTGGGGCTCCACATTGATT +
Preference number: 3 (lower is better)
Translates to: GLHWVLWPACSL*DKMSLWGSTLI
Trigger: AATCAATGTGGAGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGTGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR GCA 72 bp GGAAGGTTCCAGCTACAGGACTGTTGGTGCGGGAGGTaGCCACTCCATTTCCCTCAGGTAACCTTTGCTAAC +
Preference number: 3 (lower is better)
Translates to: GRFQLQDCWCGR*PLHFPQVTFAN
Trigger: GTTAGCAAAGGTTACCTGAGGGAAATGGAGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTGGAACCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 72 bp ACAGTCAACTCAGGAAGGTTCCAGCTACAGGACTGTTaGTGCGGGAGGTGCCCACTCCATTTCCCTCAGGTA +
Preference number: 3 (lower is better)
Translates to: TVNSGRFQLQDC*CGRCPLHFPQV
Trigger: TACCTGAGGGAAATGGAGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTGGAACCTTCCTGAGTTGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 72 bp CTCTCTGAGATAAAATGTCCCTCTGGGGCTCCACATTaGTTTCCTGCTGAGGAAGGAGGGCTGCAGGTGCCT +
Preference number: 3 (lower is better)
Translates to: LSEIKCPSGAPH*FPAEEGGLQVP
Trigger: AGGCACCTGCAGCCCTCCTTCCTCAGCAGGAAATCAATGTGGAGCCCCAGAGGGACATTTTATCTCAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGAACTTACTGTGTCTTaGGGACTGGCCAATTTTTAT +
Preference number: 3 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPELTVS*GLANFY
Trigger: ATAAAAATTGGCCAGTCCCAAAGACACAGTAAGTTC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGCTAACTCATCTCTTTaGCAGACTTTGACGTCTACG +
Preference number: 3 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAANSSL*QTLTST
Trigger: CGTAGACGTCAAAGTCTGCAAAAGAGATGAGTTAGC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR GCA 72 bp CACTTGTTTAGGCCAAGTGACACGACCCACAAAGTCTaGAGGAAGGGTGGTACTTTACAAGCAGCCTTGGAG +
Preference number: 3 (lower is better)
Translates to: HLFRPSDTTHKV*RKGGTLQAALE
Trigger: CTCCAAGGCTGCTTGTAAAGTACCACCCTTCCTGCAGACTTTGTGGGTCGTGTCACTTGGCCTAAACAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCCAGCTACAGGACTGTaGGTGCGGGAGGTGCCCACT +
Preference number: 3 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFPATGL*VREVPT
Trigger: AGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTGG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 72 bp CAAGATGATCAGACAATGGCGGCTGGTGGGGATATATaGACCACAGTCAGGAAGAGGGTAAGAGGGATGCAA +
Preference number: 3 (lower is better)
Translates to: QDDQTMAAGGDI*TTVRKRVRGMQ
Trigger: TTGCATCCCTCTTACCCTCTTCCTGACTGTGGTTCATATATCCCCACCAGCCGCCATTGTCTGATCATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 72 bp TGTGTAGTCTGGAAGGCATCTGAACGTGTCCTATCCTaGGGCTGCAATCTCAAGCCTGCAGCTATCAGGAAA +
Preference number: 3 (lower is better)
Translates to: CVVWKASERVLS*GCNLKPAAIRK
Trigger: TTTCCTGATAGCTGCAGGCTTGAGATTGCAGCCTCAGGATAGGACACGTTCAGATGCCTTCCAGACTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 72 bp AACTGTCACCTCTACCTTCCCAAGATGATCAGACAATaGCGGCTGGTGGGGATATATGAACCACAGTCAGGA +
Preference number: 3 (lower is better)
Translates to: NCHLYLPKMIRQ*RLVGIYEPQSG
Trigger: TCCTGACTGTGGTTCATATATCCCCACCAGCCGCCATTGTCTGATCATCTTGGGAAGGTAGAGGTGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 72 bp GACTTTTCGAGAACTGTCACCTCTACCTTCCCAAGATaGTCAGACAATGGCGGCTGGTGGGGATATATGAAC +
Preference number: 3 (lower is better)
Translates to: DFSRTVTSTFPR*SDNGGWWGYMN
Trigger: GTTCATATATCCCCACCAGCCGCCATTGTCTGATCATCTTGGGAAGGTAGAGGTGACAGTTCTCGAAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 72 bp GAATCTAAGCATAGTGTGTGTAGTCTGGAAGGCATCTaGACGTGTCCTATCCTGAGGCTGCAATCTCAAGCC +
Preference number: 3 (lower is better)
Translates to: ESKHSVCSLEGI*TCPILRLQSQA
Trigger: GGCTTGAGATTGCAGCCTCAGGATAGGACACGTTCAGATGCCTTCCAGACTACACACACTATGCTTAGATTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 72 bp CTCACATCTGGCACTTCTCTGGGTGCAGCACCAGAGTaGAGGCAATGGGTAAACCAGTCAAACAACATTTTT +
Preference number: 3 (lower is better)
Translates to: LTSGTSLGAAPE*RQWVNQSNNIF
Trigger: AAAAATGTTGTTTGACTGGTTTACCCATTGCCTCCACTCTGGTGCTGCACCCAGAGAAGTGCCAGATGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 72 bp AAGTCTGCAGGAAGGGTGGTACTTTACAAGCAGCCTTaGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCT +
Preference number: 3 (lower is better)
Translates to: KSAGRVVLYKQP*SSLVKEAWCAS
Trigger: AGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAAGGCTGCTTGTAAAGTACCACCCTTCCTGCAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTTGTTGTGCCTGGCTTaGCATCAGGAGCAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCLLCLA*HQEQQG
Trigger: CCCTTGCTGCTCCTGATGCAAAGCCAGGCACAACAA...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGACTTCCTATTTAGGCTaGATATTTTCGACCAAGTGC +
Preference number: 3 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLTSYLG*IFSTKC
Trigger: GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGT...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGCTGCAGGTGCCTCTATaGCTTACGCCCTCTTTAGAG +
Preference number: 3 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQLQVPL*LTPSLE
Trigger: CTCTAAAGAGGGCGTAAGCAATAGAGGCACCTGCAG...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 72 bp GGATTAGGTGAGGCAGGTCACTATGCCTCTCGTAATTaGGGTCTTTTTCCCTGTTTGGAGTTTTCAGGTAGA +
Preference number: 3 (lower is better)
Translates to: GLGEAGHYASRN*GLFPCLEFSGR
Trigger: TCTACCTGAAAACTCCAAACAGGGAAAAAGACCTCAATTACGAGAGGCATAGTGACCTGCCTCACCTAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGCAAGTATCACTAGGTTaGGTTTTCCAAGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQQVSLG*VFQGKL
Trigger: CAGCTTCCCTTGGAAAACCAAACCTAGTGATACTTG...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGGCTCTAAATTCCCTTaGAAAAGACAGTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQGSKFP*KRQSSW
Trigger: CCAGGAGGACTGTCTTTTCAAAGGGAATTTAGAGCC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAATTGTTGTGCCTGGCTTaGCATCAGGAGCAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: TENDFLFRLDIFDQVLCELLCLA*HQEQQG
Trigger: CCCTTGCTGCTCCTGATGCAAAGCCAGGCACAACAA...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGCTCAGAGAAACTAGATaGACCAAGTGCACTGTGAAA +
Preference number: 3 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQLRETR*TKCTVK
Trigger: TTTCACAGTGCACTTGGTCAATCTAGTTTCTCTGAG...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CCA 72 bp CACTTGGTTCTTCATTCACCTCATTCTACTGCATGTTaGAATGAACTCTGGAATCAGGTAGAATACTTCCGC +
Preference number: 3 (lower is better)
Translates to: HLVLHSPHSTAC*NELWNQVEYFR
Trigger: GCGGAAGTATTCTACCTGATTCCAGAGTTCATTCCAACATGCAGTAGAATGAGGTGAATGAAGAACCAAGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGGTCTTTTTCCCTGTTaGGAGTTTTCAGGTAGAGTC +
Preference number: 3 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQGLFPC*EFSGRV
Trigger: GACTCTACCTGAAAACTCCAAACAGGGAAAAAGACC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAAGACCACACTATGCTTaGGACATGGATTTCCCTTGT +
Preference number: 3 (lower is better)
Translates to: VKSEHWKSSITRFGFPRERPHYA*DMDFPC
Trigger: ACAAGGGAAATCCATGTCCAAAGCATAGTGTGGTCT...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGAGACCACACTATGCTTaGGACATGGATTTCCCTTGT +
Preference number: 3 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQRPHYA*DMDFPC
Trigger: ACAAGGGAAATCCATGTCCAAAGCATAGTGTGGTCT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCAAGTATCACTAGGTTaGGTTTTCCAAGGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCQVSLG*VFQGKL
Trigger: CAGCTTCCCTTGGAAAACCAAACCTAGTGATACTTG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGCTAACTCATCTCTTTaGCAGACTTTGACGTCTACG +
Preference number: 3 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQANSSL*QTLTST
Trigger: CGTAGACGTCAAAGTCTGCAAAAGAGATGAGTTAGC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGCCATGGTTTCTAAAGTaGAGCTTCTGTCTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQPWFLK*SFCLVL
Trigger: GAGGACAAGACAGAAGCTCAACTTTAGAAACCATGG...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 72 bp AGTGTAGGGAAGAGACAGACAGATGAGTGGATATCCTaGAAAACGTTAGTAAAATCTGAGCACTGGAAGTCA +
Preference number: 3 (lower is better)
Translates to: SVGKRQTDEWIS*KTLVKSEHWKS
Trigger: TGACTTCCAGTGCTCAGATTTTACTAACGTTTTTCAGGATATCCACTCATCTGTCTGTCTCTTCCCTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR TCA 72 bp TGTGCCTCTAGAGTAAAATCGGCCCCATATCCAGTATaGTATATGCAGTTCATTTCTCTACGTGAGTGTATA +
Preference number: 3 (lower is better)
Translates to: CASRVKSAPYPV*YMQFISLRECI
Trigger: TATACACTCACGTAGAGAAATGAACTGCATATATCATACTGGATATGGGGCCGATTTTACTCTAGAGGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR-3UTR CAA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAGGTCTTTTTCCCTGTTaGGAGTTTTCAGGTAGAGTC +
Preference number: 3 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEGLFPC*EFSGRV
Trigger: GACTCTACCTGAAAACTCCAAACAGGGAAAAAGACC...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTAACAGGCCGGCCGACTaGCTGTCGGGGCCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPNRPAD*LSGPGR
Trigger: CCTGCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGGCTGCAGGCCGCCGTaGTCCAGCTGTTGCATGCGC +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPGCRPP*SSCCMR
Trigger: GCGCATGCAACAGCTGGAGCACGGCGGCCTGCAGCC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTTTGACCAGGCCTGGCTaGAGGCCGCCGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPLTRPG*RPPCSS
Trigger: GCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAA...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGAAACCCGGCCCAAGTaGCGTGTGTGCGCGCGCGTC +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPETRPK*RVCARV
Trigger: GACGCGCGCGCACACACGGCACTTGGGCCGGGTTTC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTCCCGGCAGGCCATGCTaGACCACCATGTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPPGRPC*TTMWLT
Trigger: GGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGG...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGCCGGCTGCAGGGACTaGACGGTGAGGCAATCTGTG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPAGCRD*TVRQSV
Trigger: CACAGATTGCCTCACCGTGCAGTCCCTGCAGCCGGC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTAACAGGCCGGCCGACTaGCTGTCGGGGCCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGANRPAD*LSGPGR
Trigger: CCTGCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTCTGCGTCCACAGCTGTaGGTGGAGGTAACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPLRPQL*VEVTGR
Trigger: CCTCCCAGTTACCTCCACTCACAGCTGTGGACGCAG...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTCCCAAGTGCCGTGTGTaGGCGCGCGTCTGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAPKCRV*ARVCEG
Trigger: GCCCTCGCAGACGCGCGCGCACACACGGCACTTGGG...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTCATCTTCAGCCCCGCTaGGGAGAGACTCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPHLQPR*GETPQR
Trigger: TCTTTGGGGAGTCTCTCCGCAGCGGGGCTGAAGATG...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTAGGCAGGCAGATGGATaGGGCTCTCAGCCACGTTGT +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPRQADG*GSQPRC
Trigger: ACAACGTGGCTGAGAGCCGCATCCATCTGCCTGCCT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGCAGGGCCCGCTGATTaGGCTGACATCCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPAGPAD*ADILPQ
Trigger: TTGAGGAAGGATGTCAGCCCAATCAGCGGGCCCTGC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTTGTTCATCCTCGTCCTaGGCCGGGGAATGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPCSSSS*AGECFW
Trigger: CCAGAAGCATTCCCCGGCCCAGGACGAGGATGAACA...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTATGAGTCCCAGTCGCTaGACCATCATGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPMSPSR*TIMGLL
Trigger: CAGCAGTCCCATGATGGTTCAGCGACTGGGACTCAT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTCTCCTGCTTCATGCTTaGGGCCGACTGACTTTCCGT +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPLLLHA*GRLTFR
Trigger: ACGGAAAGTCAGTCGGCCTCAAGCATGAAGCAGGAG...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTAGATCAAGGCCATTCTaGGAGCCGTGGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPRSRPF*EPWLES
Trigger: GCTCTCCAACCACGGCTCTCAGAATGGCCTTGATCT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGCTCCAGCTGTTGCATaGGCTCGTGCTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAAPAVA*ARAPGP
Trigger: GGGCCCTGGAGCACGAGCGCATGCAACAGCTGGAGC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGCAACAAAGCCCGGCGTaGGGGTCCCTTCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLQQSPA*GSLPPA
Trigger: GGCCGGGGGAAGGGACCCGCACGCCGGGCTTTGTTG...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTTCAGACTCAAGGTCGTaGACGCCAAAGACTCACGCG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPSDSRS*TPKTHA
Trigger: CGCGTGAGTCTTTGGCGTCCACGACCTTGAGTCTGA...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTAGGCCACAGGAAGACTaGAGCCTGGTTCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPRPQED*SLVHKQ
Trigger: CTGCTTGTGAACCAGGCTCCAGTCTTCCTGTGGCCT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTTCTACCTTCCCAAGATaGTCAGACAATGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPSTFPR*SDNGGW
Trigger: CCAGCCGCCATTGTCTGATCATCTTGGGAAGGTAGA...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTAGTCTGGAAGGCATCTaGACGTGTCCTATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPSLEGI*TCPILR
Trigger: CCTCAGGATAGGACACGTTCAGATGCCTTCCAGACT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGCTGGGGAATGCAGCTaGCGCGCACGCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAAGECS*RARPGN
Trigger: ATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCGCTGCGGGGACAGGTTaGCCGGCGAAGCCCTCGACC +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTAAGTG*PAKPST
Trigger: GGTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGC...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGCGTCGTCGTCCAGGGTaGCCTGGGGCAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLRRRPG*PGARPA
Trigger: AGCTGGCCTTGCCCCAGGCCACCCTGGACGACGACG...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGTGACTGACAGGATGTaGGGGTGGTACGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAVTDRM*GWYGPS
Trigger: GCTGGGGCCGTACCACCCCCACATCCTGTCAGTCAC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGACATGCCTCCAGCCTaGGTGACCTGGAATCGCGGC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGADMPPA*VTWNRG
Trigger: GCCGCGATTCCAGGTCACCCAGGCTGGAGGCATGTC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTTCCCTCTTGCCCCTGTaGGGTAAGAAAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGASLLPL*GKKGAG
Trigger: CCCTGCCCCTTTCTTACCTCACAGGGGCAAGAGGGA...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTGCGGGAAGCAGGGCTaGACTGGGTCCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLCGKQG*TGSCGQ
Trigger: CTGGCCACAGGACCCAGTGCAGCCCTGCTTCCCGCA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTAGGAAAGACCCACGGTaGGGGAAGCAGGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGARKDPR*GKQGCT
Trigger: AGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTCTGCAATCTCAAGCCTaGAGCTATCAGGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPLQSQA*SYQERP
Trigger: GGGTCTTTCCTGATAGCTGCAGGCTTGAGATTGCAG...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGATGTGGTGAGGAGATaGAGCAGAAGGTGCAAACCT +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPDVVRR*SRRCKP
Trigger: AGGTTTGCACCTTCTGCTCCATCTCCTCACCACATC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTCCAGCCTGGGTGACCTaGAATCGCGGCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAPAWVT*NRGFPL
Trigger: CAATGGGAAGCCGCGATTCCAGGTCACCCAGGCTGG...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGGCGCGGCTGGGGAATaGAGCTGCCGCGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQGAAGE*SCRARP
Trigger: TGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTGTTGCATGCGCTCGTaGTCCAGGGCCCCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTCCMRS*SRAPSS
Trigger: CGAGGACGGGGCCCTGGAGCACGAGCGCATGCAACA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCGCACGAGCTCCTCCTaGTGGTCGTACAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTRTSSS*WSYRAL
Trigger: CAGCGCCCTGTACGACCAGCAGGAGGAGCTCGTGCG...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGGTTTGGTGTCCAGATaGGTCCGCTGGTGTTTGGCG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAGLVSR*VRWCLA
Trigger: CGCCAAACACCAGCGGACGCATCTGGACACCAAACC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTCATCTTCAGCCCCGCTaGGGAGAGACTCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAHLQPR*GETPQR
Trigger: TCTTTGGGGAGTCTCTCCGCAGCGGGGCTGAAGATG...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTTCAAGGTCCTGGGTGTaGAGGAGTGGCCAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGASRSWV*RSGQES
Trigger: GCTCTCTTGGCCACTCCTGCACACCCAGGACCTTGA...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTACGACCCACAAAGTCTaGAGGAAGGGTGGTACTTTA +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPTTHKV*RKGGTL
Trigger: TAAAGTACCACCCTTCCTGCAGACTTTGTGGGTCGT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGGGATGCTGGCTAATTaGTGCCGGCGGGTTCCGTCG +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLGMLAN*CRRVPS
Trigger: CGACGGAACCCGCCGGCAGCAATTAGCCAGCATCCC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGACAGCGCTCTCTTCTTaGAGCGGGCCGAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLTALSS*SGPSGT
Trigger: GGTCCCACTCGGCCCGCTCCAAGAAGAGAGCGCTGT...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGTGGTTGACCAGGCCTaGCTGCAGGCCGCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLVVDQA*LQAAVL
Trigger: GAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCAC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CAA 72 bp TTTCCTGCTGAGGAAGGAGGGCTGCAGGTGCCTCTATaGCTTACGCCCTCTTTAGAGTCCCTCTTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FPAEEGGLQVPL*LTPSLESLLPL
Trigger: CAGGGGCAAGAGGGACTCTAAAGAGGGCGTAAGCAATAGAGGCACCTGCAGCCCTCCTTCCTCAGCAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTATGAGTCCCAGTCGCTaGACCATCATGGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAMSPSR*TIMGLL
Trigger: CAGCAGTCCCATGATGGTTCAGCGACTGGGACTCAT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTAGGGTGAGGATTAGGTaGGGCAGGTCACTATGCCTC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGARVRIR*GRSLCL
Trigger: GAGGCATAGTGACCTGCCTCACCTAATCCTCACCCT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGCGGCTTCCCATTGGTaGGCATTTGTCTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLAASHW*AFVSWG
Trigger: GCCCCAGGAGACAAATGCTCACCAATGGGAAGCCGC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGGTGGAGACTCATGCTaGATGATCTTCCATTCATTC +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPGGDSC*MIFHSF
Trigger: GAATGAATGGAAGATCATGCAGCATGAGTCTCCACC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCACGAGCTCCTCCTGCTaGTCGTACAGGGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTTSSSC*SYRALQ
Trigger: CTGCAGCGCCCTGTACGACCAGCAGGAGGAGCTCGT...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCGTGACTGACAGGATGTaGGGGTGGTACGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTVTDRM*GWYGPS
Trigger: GCTGGGGCCGTACCACCCCCACATCCTGTCAGTCAC...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGGAATCGGGGTAGTGTaGGGGACAGAACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAGIGVV*GTELLQ
Trigger: CTGCAGAAGTTCTGTCCCCCACACTACCCCGATTCC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTAAGATGATCAGACAATaGCGGCTGGTGGGGATATAT +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPKMIRQ*RLVGIY
Trigger: ATATATCCCCACCAGCCGCCATTGTCTGATCATCTT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTAGGCCACAGGAAGACTaGAGCCTGGTTCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGARPQED*SLVHKQ
Trigger: CTGCTTGTGAACCAGGCTCCAGTCTTCCTGTGGCCT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGATAAAATGTCCCTCTaGGGCTCCACATTGATTTCC +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPDKMSL*GSTLIS
Trigger: GGAAATCAATGTGGAGCCCCAGAGGGACATTTTATC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCCCGGGCGGCGCAGTGTaGACGCGGCTGCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPPGGAV*TRLQGE
Trigger: CTCTCCCTGCAGCCGCGTCCACACTGCGCCGCCCGG...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCCAGGAGTCCCGGAGTaGGCTCGGATGGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTPGVPE*ARMAGM
Trigger: CATTCCTGCCATCCGAGCCCACTCCGGGACTCCTGG...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGCTGGCTTGCTGGAGGTaGAATGAGTCCCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLLACWR*NESQSL
Trigger: CAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAG...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGGGTCCTTTAAGGGTTaGCAGCCAGGAAGTAACAGG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAGSFKG*QPGSNR
Trigger: CCTGTTACTTCCTGGCTGTCAACCCTTAAAGGACCC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGAACGTGTCCTATCCTaGGGCTGCAATCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAERVLS*GCNLKP
Trigger: AGGCTTGAGATTGCAGCCTCAGGATAGGACACGTTC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAGTTCCGTCGCCGGTGTaGCCCTGGACGGCGCGGACG +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREVPSPV*PWTART
Trigger: CGTCCGCGCCGTCCAGGGTCACACCGGCGACGGAAC...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGGCGCGGCTGGGGAATaGAGCTGCCGCGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQGAAGE*SCRARP
Trigger: TGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGTTGACCAGGCCTGGCTaGAGGCCGCCGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQLTRPG*RPPCSS
Trigger: GCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAA...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTATCCAGCGGCAGCAATaGTTGCCCCCGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLIQRQQ*LPPMPS
Trigger: GGACGGCATCGGGGGCAAGCATTGCTGCCGCTGGAT...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTTCTGAGAGCCGTGGTTaGAGAGCGAAGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLSESRG*RAKGGP
Trigger: GGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGA...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTTTGGAGCGGGCCGAGTaGGACCTGGTGGATGAGTGC +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLLERAE*DLVDEC
Trigger: GCACTCATCCACCAGGTCCCACTCGGCCCGCTCCAA...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCGCTGCGGGGACAGGTTaGCCGGCGAAGCCCTCGACC +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPAAGTG*PAKPST
Trigger: GGTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGC...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCACCAGCACGCCCTTCTaGCTGCCGGGCACCGGGCGC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCTSTPF*LPGTGR
Trigger: GCGCCCGGTGCCCGGCAGCCAGAAGGGCGTGCTGGT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTGCTGCACCACCATGTaGTTGACCAGGCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTCCTTM*LTRPGC
Trigger: GCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGCGTCGTCGTCCAGGGTaGCCTGGGGCAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQRRRPG*PGARPA
Trigger: AGCTGGCCTTGCCCCAGGCCACCCTGGACGACGACG...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTCCAGATGCGTCCGCTaGTGTTTGGCGCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTSRCVR*CLARSL
Trigger: CAGTGACCGCGCCAAACACCAGCGGACGCATCTGGA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTATCTGTGAGCAGGTCTaGATGGAGCTCTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAICEQV*MELCAG
Trigger: TCCAGCACAGAGCTCCATCCAGACCTGCTCACAGAT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTAAAAGACAGTCCTCCTaGTCACATAGTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPKRQSS*SHSPGK
Trigger: TTTTCCTGGACTATGTGACCAGGAGGACTGTCTTTT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGAGGCAGAGGCGGGGTaGCTGGACCCTCGGCATCAG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQEAEAG*LDPRHQ
Trigger: CTGATGCCGAGGGTCCAGCCACCCCGCCTCTGCCTC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGCGGGCGGCCGGCGCTaGCGAGGAGTAACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFAGGRR*RGVTWG
Trigger: GCCCCAAGTTACTCCTCGCCAGCGCCGGCCGCCCGC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGAGATCAAGGCCATTCTaGGAGCCGTGGTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLRSRPF*EPWLES
Trigger: GCTCTCCAACCACGGCTCTCAGAATGGCCTTGATCT...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGTTTATAGCGGGCGTTaGAGGGCTTGTATCTTCGAG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAVYSGR*RACIFE
Trigger: CTCGAAGATACAAGCCCTTCAACGCCCGCTATAAAC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCTGGAGAAGGGTGACTaGCAGGATGTGGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTLEKGD*QDVGVV
Trigger: TACCACCCCCACATCCTGTCAGTCACCCTTCTCCAG...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGCTCCAGCTGTTGCATaGGCTCGTGCTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQAPAVA*ARAPGP
Trigger: GGGCCCTGGAGCACGAGCGCATGCAACAGCTGGAGC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTAATGCTTGCCCCCGATaGCGTCCATCTCCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLNACPR*RPSPRR
Trigger: ACGACGGGGAGATGGACGGCATCGGGGGCAAGCATT...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGGTCGTACAGGGCGCTaGAGTCGATCCAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQGRTGR*SRSSGS
Trigger: GCTGCCGCTGGATCGACTGCAGCGCCCTGTACGACC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTACTAGATTGACCAAGTaGACTGTGAAAACAAAACCC +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPTRLTK*TVKTKP
Trigger: GGGTTTTGTTTTCACAGTGCACTTGGTCAATCTAGT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAATGCGGGAAGCAGGGCTaGACTGGGTCCTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQCGKQG*TGSCGQ
Trigger: CTGGCCACAGGACCCAGTGCAGCCCTGCTTCCCGCA...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGGGCCGAGTGGGACCTaGTGGATGAGTGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQGPSGT*WMSAED
Trigger: GTCCTCGGCACTCATCCACCAGGTCCCACTCGGCCC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTTGCTGCACCACCATGTaGTTGACCAGGCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLCCTTM*LTRPGC
Trigger: GCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCA...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTTCCAGGCCTTCAAACTaGAACTCAGAAAAAGAATTG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPSRPSN*NSEKEL
Trigger: CAATTCTTTTTCTGAGTTCCAGTTTGAAGGCCTGGA...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCCCGACCCCGGGATGCTaGCTAATTGCTGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPPTPGC*LIAAGG
Trigger: CCCGCCGGCAGCAATTAGCCAGCATCCCGGGGTCGG...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCGCACCACCATGTGGTTaGCCAGGCCTGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPAPPCG*PGLAAG
Trigger: GCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGC...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAACCAGGCGTTCGGTCTTaGACAGGCCGGCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREPGVRS*TGRPTG
Trigger: GCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGG...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAACCGAGCTCCGGGTGGTaGAGGTGCGCATGGGCATGG +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREPSSGW*RCAWAW
Trigger: CCATGCCCATGCGCACCTTCACCACCCGGAGCTCGG...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTCCACACTGCAGGAGCTaGCAGGCGGCACAATTCTCT +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLPHCRS*QAAQFS
Trigger: AGAGAATTGTGCCGCCTGTCAGCTCCTGCAGTGTGG...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGCTGGTGGGGATATATaGACCACAGTCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLAGGDI*TTVRKR
Trigger: CCTCTTCCTGACTGTGGTTCATATATCCCCACCAGC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTAGGCTAAATTACAACTaGCATTTTGATGCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPRLNYN*HFDAVS
Trigger: CGAAACTGCATCAAAATGTCAGTTGTAATTTAGCCT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGCTGGGGAATGCAGCTaGCGCGCACGCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQAGECS*RARPGN
Trigger: ATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGCCGTGCTCCAGCTGTTaGATGCGCTCGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQPCSSC*MRSCSR
Trigger: CCTGGAGCACGAGCGCATGCAACAGCTGGAGCACGG...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAGGCTGCAGGCCGCCGTaGTCCAGCTGTTGCATGCGC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREGCRPP*SSCCMR
Trigger: GCGCATGCAACAGCTGGAGCACGGCGGCCTGCAGCC...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCGGGCCCGGCAGGCCATaGTGCACCACCATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPGPGRP*CTTMWL
Trigger: CAACCACATGGTGGTGCAGCATGGCCTGCCGGGCCC...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGTAGGTCTACGGTGCTaGCCGGGAACTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQVGLRC*PGTPPG
Trigger: GCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTAC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGGGGTAGGTCTACGGTaGTGCCCGGGAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQGVGLR*CPGTPP
Trigger: TGGAGGAGTTCCCGGGCAGCACCGTAGACCTACCCC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGGGGAAGTGGCCGGCTaGAGGGACTGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCGEVAG*RDCTVR
Trigger: CCTCACCGTGCAGTCCCTGCAGCCGGCCACTTCCCC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGGGGAAGTGGCCGGCTaGAGGGACTGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFGEVAG*RDCTVR
Trigger: CCTCACCGTGCAGTCCCTGCAGCCGGCCACTTCCCC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTTCCACGGTGCTGATCTaGAAGAAGGTAGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGASTVLI*KKVASS
Trigger: TGAAGATGCTACCTTCTTGCAGATCAGCACCGTGGA...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAGGGCCGACCCCGGGATaGTGGCTAATTGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREGPTPG*WLIAAG
Trigger: GCCGGCAGCAATTAGCCAGCATCCCGGGGTCGGCCC...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTAAGCTAGGACTGATCTaGTTGCATGCTGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAKLGLI*LHAVET
Trigger: GGTCTCTACAGCATGCAACCAGATCAGTCCTAGCTT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGTGGTTGACCAGGCCTaGCTGCAGGCCGCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQVVDQA*LQAAVL
Trigger: GAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCAC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGTGTGGCTCCGCAAGTaGATCTTGAGATTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAVWLRK*ILRFSS
Trigger: GCTTGAAAATCTCAAGATCCACTTGCGGAGCCACAC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTTTTTCCAAGGGAAGCTaGCACATGACTCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAFSKGS*HMTQSV
Trigger: GACAGACTGAGTCATGTGCCAGCTTCCCTTGGAAAA...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGTGGGACCTGGTGGATaGGTGCCGAGGACTAGGGTA +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQVGPGG*VPRTRV
Trigger: TACCCTAGTCCTCGGCACTCATCCACCAGGTCCCAC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAAGCCCTCGACCCGTTaGTGTAGGCCACCAAGGACG +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQKPSTR*CRPPRT
Trigger: CGTCCTTGGTGGCCTACATCAACGGGTCGAGGGCTT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAGCACCACCATGTGGTTaGCCAGGCCTGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREAPPCG*PGLAAG
Trigger: GCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGC...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGGTCACTGGAGTTACTaGAGGCCTTCTGACAACCCG +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLGHWSY*RPSDNP
Trigger: CGGGTTGTCAGAAGGCCTTCAGTAACTCCAGTGACC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGAACTCTCCGGGGGCTaGTGTGGTGAGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQELSGG*CGEEME
Trigger: CTCCATCTCCTCACCACATCAGCCCCCGGAGAGTTC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTCTGGGGCTCCACATTaGTTTCCTGCTGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTSGAPH*FPAEEG
Trigger: TCCTTCCTCAGCAGGAAATCAATGTGGAGCCCCAGA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCAGTCTGGAAGGCATCTaGACGTGTCCTATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTSLEGI*TCPILR
Trigger: CCTCAGGATAGGACACGTTCAGATGCCTTCCAGACT...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTGTTGCATGCGCTCGTaGTCCAGGGCCCCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCCCMRS*SRAPSS
Trigger: CGAGGACGGGGCCCTGGAGCACGAGCGCATGCAACA...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAAGCGGCAGCAATGCTTaGCCCCGATGCCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQSGSNA*PRCRPS
Trigger: AGATGGACGGCATCGGGGGCAAGCATTGCTGCCGCT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCGCACGAGCTCCTCCTaGTGGTCGTACAGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCRTSSS*WSYRAL
Trigger: CAGCGCCCTGTACGACCAGCAGGAGGAGCTCGTGCG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCGCCGGCTGCAGGGACTaGACGGTGAGGCAATCTGTG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPAGCRD*TVRQSV
Trigger: CACAGATTGCCTCACCGTGCAGTCCCTGCAGCCGGC...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAGGAAAGACCCACGGTaGGGGAAGCAGGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQRKDPR*GKQGCT
Trigger: AGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTGGGACTCGATGTGCTaGCACAGGGCGAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFWDSMC*HRARGQ
Trigger: CTGGCCCCTCGCCCTGTGGCAGCACATCGAGTCCCA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGGGCCGAGTGGGACCTaGTGGATGAGTGCCGAGGAC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCGPSGT*WMSAED
Trigger: GTCCTCGGCACTCATCCACCAGGTCCCACTCGGCCC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCACGAGCTCCTCCTGCTaGTCGTACAGGGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPTSSSC*SYRALQ
Trigger: CTGCAGCGCCCTGTACGACCAGCAGGAGGAGCTCGT...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACAGCTACAGGACTGTTaGTGCGGGAGGTGCCCACTC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQQLQDC*CGRCPL
Trigger: GAGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGCAGAGGCGGGGTGGCTaGACCCTCGGCATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQQRRGG*TLGISS
Trigger: TGAGCTGATGCCGAGGGTCCAGCCACCCCGCCTCTG...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQPMDLH*GPKPRA
Trigger: GGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp AAGGATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGACCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KDVYQNSTHGRLWGQNSGPMDLH*GPKPRA
Trigger: GGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGG...TCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR TCA 90 bp ATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATGACCTGGCTTGCTGGAGGTaGAATGAGTCCCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: MYIKIPPMVVSGDRIQDDLACWR*NESQSL
Trigger: CAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAG...GTCATCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGGAGAAAATGGGAGCTaGATAGAGGTCAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQGENGS*IEVRPG
Trigger: CCCGGGCCTGACCTCTATTCAGCTCCCATTTTCTCC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACTGGAGAAGGGTGACTaGCAGGATGTGGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLEKGD*QDVGVV
Trigger: TACCACCCCCACATCCTGTCAGTCACCCTTCTCCAG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTTGTTCTTTGCAGTATTaGAGAAGGAGCTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGACSLQY*RRSWNS
Trigger: AGAGTTCCAGCTCCTTCTTCAATACTGCAAAGAACA...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGGGTCCTTTAAGGGTTaGCAGCCAGGAAGTAACAGG +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLGSFKG*QPGSNR
Trigger: CCTGTTACTTCCTGGCTGTCAACCCTTAAAGGACCC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCCGTGCTCCAGCTGTTaGATGCGCTCGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFPCSSC*MRSCSR
Trigger: CCTGGAGCACGAGCGCATGCAACAGCTGGAGCACGG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGTAGGTCTACGGTGCTaGCCGGGAACTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCVGLRC*PGTPPG
Trigger: GCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTAC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCAATGCTTGCCCCCGATaGCGTCCATCTCCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPNACPR*RPSPRR
Trigger: ACGACGGGGAGATGGACGGCATCGGGGGCAAGCATT...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCATCCAGCGGCAGCAATaGTTGCCCCCGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCIQRQQ*LPPMPS
Trigger: GGACGGCATCGGGGGCAAGCATTGCTGCCGCTGGAT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTTGTTGTGCCTGGCTTTaGATCAGGAGCAGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLCCAWL*IRSSKG
Trigger: ACCCTTGCTGCTCCTGATGCAAAGCCAGGCACAACA...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCTGCAATCTCAAGCCTaGAGCTATCAGGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTLQSQA*SYQERP
Trigger: GGGTCTTTCCTGATAGCTGCAGGCTTGAGATTGCAG...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGAAGCTAGGACTGATCTaGTTGCATGCTGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLKLGLI*LHAVET
Trigger: GGTCTCTACAGCATGCAACCAGATCAGTCCTAGCTT...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAATCTGAGAGCCGTGGTTaGAGAGCGAAGGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPRESESRG*RAKGGP
Trigger: GGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGA...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTTGGAGCGGGCCGAGTaGGACCTGGTGGATGAGTGC +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQLERAE*DLVDEC
Trigger: GCACTCATCCACCAGGTCCCACTCGGCCCGCTCCAA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAATCCTCCCCTTTGCGCTaGTCGATGTGGACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQSSPLR*SMWTFS
Trigger: CGAGAAGGTCCACATCGACCAGCGCAAAGGGGAGGA...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTTACGAAAACAAAAGGTaGCAAGCAACATCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAYENKR*QATSRS
Trigger: GGACCTTGATGTTGCTTGCCACCTTTTGTTTTCGTA...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTACTATGCTTTGGACATaGATTTCCCTTGTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGATMLWT*ISLVVP
Trigger: AGGCACAACAAGGGAAATCCATGTCCAAAGCATAGT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCACTGTGGAGGGAGACTaGAAGGACCTGTCAGTATAC +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTTVEGD*KDLSVY
Trigger: GTATACTGACAGGTCCTTCCAGTCTCCCTCCACAGT...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAATGGCGAGGAGTAACTTaGGGCTCCAGCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQWRGVT*GSSPSE
Trigger: CTCTGAAGGGCTGGAGCCCCAAGTTACTCCTCGCCA...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCATCCTAGGCCCCTGTaGGGTTCCCGATGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFHPRPL*GSRCPV
Trigger: CACCGGACATCGGGAACCCCACAGGGGCCTAGGATG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACTCCTGCTTCATGCTTaGGGCCGACTGACTTTCCGT +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLLLHA*GRLTFR
Trigger: ACGGAAAGTCAGTCGGCCTCAAGCATGAAGCAGGAG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGTGGGACCTGGTGGATaGGTGCCGAGGACTAGGGTA +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCVGPGG*VPRTRV
Trigger: TACCCTAGTCCTCGGCACTCATCCACCAGGTCCCAC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTAAGCCCTCGACCCGTTaGTGTAGGCCACCAAGGACG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFKPSTR*CRPPRT
Trigger: CGTCCTTGGTGGCCTACATCAACGGGTCGAGGGCTT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACCAGGCGTTCGGTCTTaGACAGGCCGGCCGACTGGC +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEPGVRS*TGRPTG
Trigger: GCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACCGAGCTCCGGGTGGTaGAGGTGCGCATGGGCATGG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEPSSGW*RCAWAW
Trigger: CCATGCCCATGCGCACCTTCACCACCCGGAGCTCGG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCTGCGTCCACAGCTGTaGGTGGAGGTAACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFLRPQL*VEVTGR
Trigger: CCTCCCAGTTACCTCCACTCACAGCTGTGGACGCAG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAACTGTAATGCCCGAGTaGGTCGAGAAGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQTVMPE*VEKALW
Trigger: CCACAGAGCCTTCTCGACTCACTCGGGCATTACAGT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAAGGGAAGCTGGCACATaGCTCAGTCTGTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQREAGT*LSLSQF
Trigger: GAACTGGGACAGACTGAGTCATGTGCCAGCTTCCCT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAGGGAAGCTGGCACATaGCTCAGTCTGTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQREAGT*LSLSQF
Trigger: GAACTGGGACAGACTGAGTCATGTGCCAGCTTCCCT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGGGGCAGGGTTACTGTaGGAGGCCACAGGAAGACTG +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQGAGLL*EATGRL
Trigger: CAGTCTTCCTGTGGCCTCTCACAGTAACCCTGCCCC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTCCCTCTTGCCCCTGTaGGGTAAGAAAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFSLLPL*GKKGAG
Trigger: CCCTGCCCCTTTCTTACCTCACAGGGGCAAGAGGGA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCCCTGGGACCACTCCTaGTTCATGCTTGAGGCCGAC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFPWDHS*FMLEAD
Trigger: GTCGGCCTCAAGCATGAAGCAGGAGTGGTCCCAGGG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTAGCGGCAGCAATGCTTaGCCCCGATGCCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFSGSNA*PRCRPS
Trigger: AGATGGACGGCATCGGGGGCAAGCATTGCTGCCGCT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTTTTTTCCTTGCTTGTTaGTCTTTGGAAGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAFFLAC*SLEECA
Trigger: GGCACATTCTTCCAAAGAGCAACAAGCAAGGAAAAA...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCTGTTGGTGCGGGAGGTaGCCACTCCATTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPCWCGR*PLHFPQ
Trigger: CTGAGGGAAATGGAGTGGGCACCTCCCGCACCAACA...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAAGGAGGGCTGCAGGTaGCTCTATTGCTTACGCCCT +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQKEGCR*LYCLRP
Trigger: AGGGCGTAAGCAATAGAGGCACCTGCAGCCCTCCTT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGAGGTATATTCAGGTTaGCTGCATTCATTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLEVYSG*LHSLPS
Trigger: AGAGGGCAATGAATGCAGCCAACCTGAATATACCTC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCTCCTCCCCTTTGCGCTaGTCGATGTGGACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPSSPLR*SMWTFS
Trigger: CGAGAAGGTCCACATCGACCAGCGCAAAGGGGAGGA...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAGCGTCCGCTGGTGTTTaGCGCGGTCACTGGAGTTAC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREASAGV*RGHWSY
Trigger: GTAACTCCAGTGACCGCGCCAAACACCAGCGGACGC...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTCCAGATGCGTCCGCTaGTGTTTGGCGCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFSRCVR*CLARSL
Trigger: CAGTGACCGCGCCAAACACCAGCGGACGCATCTGGA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGATGGAGCTCTGTGCTaGACCGCAACTTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLDGALC*TATFSL
Trigger: CAAGGAAAAAGTTGCGGTCCAGCACAGAGCTCCATC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGGCTTGAATAATTGCTaGAGAAAATGGGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAGLNNC*RKWELN
Trigger: ATTCAGCTCCCATTTTCTCCAGCAATTATTCAAGCC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGGAATCGGGGTAGTGTaGGGGACAGAACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQGIGVV*GTELLQ
Trigger: CTGCAGAAGTTCTGTCCCCCACACTACCCCGATTCC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTACATCAAAACTGGCCTaGCCCATGGATGTAGGGACT +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLTSKLA*PMDVGT
Trigger: AGTCCCTACATCCATGGGCCAGGCCAGTTTTGATGT...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCGTCGAGAAGGCTCTGTaGAAAACATCAAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTVEKAL*KTSKLA
Trigger: GGCCAGTTTTGATGTTTTCCACAGAGCCTTCTCGAC...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCGCAGGGCCCGCTGATTaGGCTGACATCCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPAGPAD*ADILPQ
Trigger: TTGAGGAAGGATGTCAGCCCAATCAGCGGGCCCTGC...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTTCCAGGCCTTCAAACTaGAACTCAGAAAAAGAATTG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGASRPSN*NSEKEL
Trigger: CAATTCTTTTTCTGAGTTCCAGTTTGAAGGCCTGGA...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTCTTTACAAGCAGCCTTaGAGTTCACTTGTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGALYKQP*SSLVKE
Trigger: TTCCTTTACAAGTGAACTCCAAGGCTGCTTGTAAAG...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTATTCTGAAAAACCTGTaGCCAAGACGGTCAAATATC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAILKNL*PRRSNI
Trigger: GATATTTGACCGTCTTGGCCACAGGTTTTTCAGAAT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381971.8
3UTR CAA 72 bp AAAGTCTGCAGGAAGGGTGGTACTTTACAAGCAGCCTaGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATC +
Preference number: 4 (lower is better)
Translates to: KVCRKGGTLQAA*EFTCKGSLVCI
Trigger: GATGCACACCAGGCTTCCTTTACAAGTGAACTCCAAGGCTGCTTGTAAAGTACCACCCTTCCTGCAGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
3UTR CAA 72 bp ATGCTACTAGCTGTGAGCATGCATATGTTAGGCCACTaGTTTAGGCCAAGTGACACGACCCACAAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: MLLAVSMHMLGH*FRPSDTTHKVC
Trigger: GCAGACTTTGTGGGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAGTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGAGATTTTCAAGCCTTaGAAAGGCCTTCTCGCAACC +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLEIFKP*KGLLAT
Trigger: GGTTGCGAGAAGGCCTTTTCAAGGCTTGAAAATCTC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCGGTCACTGGAGTTACTaGAGGCCTTCTGACAACCCG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPGHWSY*RPSDNP
Trigger: CGGGTTGTCAGAAGGCCTTCAGTAACTCCAGTGACC...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGGAGAAAATGGGAGCTaGATAGAGGTCAGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQGENGS*IEVRPG
Trigger: CCCGGGCCTGACCTCTATTCAGCTCCCATTTTCTCC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCCACACTGCAGGAGCTaGCAGGCGGCACAATTCTCT +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCPHCRS*QAAQFS
Trigger: AGAGAATTGTGCCGCCTGTCAGCTCCTGCAGTGTGG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTATGCCTCTCGTAATTaGGGTCTTTTTCCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLYASRN*GLFPCL
Trigger: CAAACAGGGAAAAAGACCTCAATTACGAGAGGCATA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCAGGGTGAGGATTAGGTaGGGCAGGTCACTATGCCTC +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPRVRIR*GRSLCL
Trigger: GAGGCATAGTGACCTGCCTCACCTAATCCTCACCCT...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAATCTGGGGCTCCACATTaGTTTCCTGCTGAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQSGAPH*FPAEEG
Trigger: TCCTTCCTCAGCAGGAAATCAATGTGGAGCCCCAGA...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCAGCCATCCCTCCTCCTaGGGGCATCTTGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCSHPSS*GHLEME
Trigger: CTCCATCTCAAGATGCCCTCAGGAGGAGGGATGGCT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp TGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATGACTTCGACTCCTACACAATaGGCATTGGGTTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: CISKFHPWSSLGTEFRMTSTPTQ*ALGWGQ
Trigger: CTGTCCCCAACCCAATGCTCATTGTGTAGGAGTCGA...AGTCATCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAGGTCGTACAGGGCGCTaGAGTCGATCCAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEGRTGR*SRSSGS
Trigger: GCTGCCGCTGGATCGACTGCAGCGCCCTGTACGACC...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGGTTTGGTGTCCAGATaGGTCCGCTGGTGTTTGGCG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFGLVSR*VRWCLA
Trigger: CGCCAAACACCAGCGGACGCATCTGGACACCAAACC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTTCGGCTTGAATAATTaGTGGAGAAAATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLFGLNN*WRKWEL
Trigger: CAGCTCCCATTTTCTCCAGCAATTATTCAAGCCGAA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTCAAGGTCCTGGGTGTaGAGGAGTGGCCAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFSRSWV*RSGQES
Trigger: GCTCTCTTGGCCACTCCTGCACACCCAGGACCTTGA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCGTTGAGACCACACTATaGTTTGGACATGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTVETTL*FGHGFP
Trigger: GGGAAATCCATGTCCAAAGCATAGTGTGGTCTCAAC...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGTAACCTTTGCTAACTaGAAAACTAACATGCTAGAG +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAVTFAN*KTNMLE
Trigger: CTCTAGCATGTTAGTTTTGCAGTTAGCAAAGGTTAC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTGTTGGTGCGGGAGGTaGCCACTCCATTTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCCWCGR*PLHFPQ
Trigger: CTGAGGGAAATGGAGTGGGCACCTCCCGCACCAACA...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCTACAGGACTGTTGGTaGGGGAGGTGCCCACTCCAT +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFLQDCW*GRCPLH
Trigger: ATGGAGTGGGCACCTCCCGCACCAACAGTCCTGTAG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTATATTTTCGACCAAGTaGTATGTGAAAATTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAIFSTK*YVKIPG
Trigger: GCCTGGAATTTTCACATAGCACTTGGTCGAAAATAT...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCAAGGAGGGCTGCAGGTaGCTCTATTGCTTACGCCCT +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPKEGCR*LYCLRP
Trigger: AGGGCGTAAGCAATAGAGGCACCTGCAGCCCTCCTT...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGCTGAGGAAGGAGGGCTaGAGGTGCCTCTATTGCTTA +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQLRKEG*RCLYCL
Trigger: TAAGCAATAGAGGCACCTGCAGCCCTCCTTCCTCAG...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGAATACTTCCGCTTGTaGGACTGTGGAGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQEYFRL*DCGGRL
Trigger: CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCGGAGTGGGCTCGGATaGCAGGAATGTGATGACCAC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCRSGLG*QECDDH
Trigger: GTGGTCATCACATTCCTGCCATCCGAGCCCACTCCG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGTTTATAGCGGGCGTTaGAGGGCTTGTATCTTCGAG +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQVYSGR*RACIFE
Trigger: CTCGAAGATACAAGCCCTTCAACGCCCGCTATAAAC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTCCGCAAGTGGATCTTaGGATTTTCAAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTSASGS*DFQALK
Trigger: TTTCAAGGCTTGAAAATCTCAAGATCCACTTGCGGA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGGAGTTTCTAAGAGTTaGGACCACACTATGCTTTGG +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLGVSKS*DHTMLW
Trigger: CCAAAGCATAGTGTGGTCTCAACTCTTAGAAACTCC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCGCTGGTGGGGATATATaGACCACAGTCAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPAGGDI*TTVRKR
Trigger: CCTCTTCCTGACTGTGGTTCATATATCCCCACCAGC...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTCGACCAAGTGCTATGTaGAAATTCCAGGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLRPSAM*KFQAFK
Trigger: TTTGAAGGCCTGGAATTTTCACATAGCACTTGGTCG...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTACTGCATGTTGGAATaGACTCTGGAATCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTYCMLE*TLESGR
Trigger: TCTACCTGATTCCAGAGTTCATTCCAACATGCAGTA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTTCTCAAAGAGGGAGGTaGTGTCCATGGTTTCTAAAG +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLSQRGR*CPWFLK
Trigger: CTTTAGAAACCATGGACATCACCTCCCTCTTTGAGA...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACCAGCATGCTCTCTCTaGGATAAAATGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQPACSL*DKMSLW
Trigger: CCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATGACTGGACAGGAGCGTCCATaGAGAGATGAAGAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: CISKFHPWSSLGTEFRMTGQERP*RDEELY
Trigger: ATAGAGCTCTTCATCTCTTCATGGACGCTCCTGTCC...AGTCATCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAACTGATCTGGTTGCATaGTGTAGAGACCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQTDLVA*CRDLAC
Trigger: GCAAGCCAGGTCTCTACAGCATGCAACCAGATCAGT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAACCACTCCTGCTTCATaGTTGAGGCCGACTGACTTT +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQTTPAS*LRPTDF
Trigger: AAAGTCAGTCGGCCTCAAGCATGAAGCAGGAGTGGT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTAGTGGCTACTTTCCGTaGCAAAAAGGTAGGATGGTA +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLSGYFP*QKGRMV
Trigger: TACCATCCTACCTTTTTGGCACGGAAAGTAGCCACT...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACCCGGCAGGCCATGCTaGACCACCATGTGGTTGACC +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEPGRPC*TTMWLT
Trigger: GGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGGATTTCCCTTGTTGTaGCTGGCTTTGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQGFPLL*LALHQE
Trigger: CTCCTGATGCAAAGCCAGGCACAACAAGGGAAATCC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCCTGAGGAAGGAGGGCTaGAGGTGCCTCTATTGCTTA +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPLRKEG*RCLYCL
Trigger: TAAGCAATAGAGGCACCTGCAGCCCTCCTTCCTCAG...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTTTATTCTGTACCAAGTaGACAATCCCTTCATTTTAC +
Preference number: 4 (lower is better)
Translates to: TGSCGQHALSEIKCPSGALFCTK*TIPSFY
Trigger: GTAAAATGAAGGGATTGTGCACTTGGTACAGAATAA...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAATGCTGGCTAATTGCTaGCGGCGGGTTCCGTCGCCG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEMLANC*RRVPSP
Trigger: CGGCGACGGAACCCGCCGGCAGCAATTAGCCAGCAT...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR GCA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGCTTCCAAACTCCTGCTaGTTTGGCTTTAAAGTATGT +
Preference number: 4 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLLPNSC*FGFKVC
Trigger: ACATACTTTAAAGCCAAAGCAGCAGGAGTTTGGAAG...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR GCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGGGCTTCCAAACTCCTaGTGCTTTGGCTTTAAAGTA +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLGLPNS*CFGFKV
Trigger: TACTTTAAAGCCAAAGCAGCAGGAGTTTGGAAGCCC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTCAGACTCAAGGTCGTaGACGCCAAAGACTCACGCG +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCSDSRS*TPKTHA
Trigger: CGCGTGAGTCTTTGGCGTCCACGACCTTGAGTCTGA...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAACACTATTGCTGGACATaGATGTCCCGGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREHYCWT*MSREEG
Trigger: GCCTTCCTCCCGGGACATCCATGTCCAGCAATAGTG...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCACTATTGCTGGACATaGATGTCCCGGGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFHYCWT*MSREEG
Trigger: GCCTTCCTCCCGGGACATCCATGTCCAGCAATAGTG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAACAGCGCTCTCTTCTTaGAGCGGGCCGAGTGGGACC +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCETALSS*SGPSGT
Trigger: GGTCCCACTCGGCCCGCTCCAAGAAGAGAGCGCTGT...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGGTCTGTGTAGCGTTTaGTACATCCTGGAATTTGAC +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLGLCSV*YILEFD
Trigger: GTCAAATTCCAGGATGTACCAAACGCTACACAGACC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCATCTGTGAGCAGGTCTaGATGGAGCTCTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPICEQV*MELCAG
Trigger: TCCAGCACAGAGCTCCATCCAGACCTGCTCACAGAT...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCTGGGTGTGCAGGAGTaGCCAAGAGAGCTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFLGVQE*PRELLA
Trigger: GGCTAAAAGCTCTCTTGGCCACTCCTGCACACCCAG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCTGGGTGTGCAGGAGTaGCCAAGAGAGCTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCLGVQE*PRELLA
Trigger: GGCTAAAAGCTCTCTTGGCCACTCCTGCACACCCAG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGACAATGGCGGCTGGTaGGGATATATGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQDNGGW*GYMNHS
Trigger: ACTGTGGTTCATATATCCCCACCAGCCGCCATTGTC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGACAATGGCGGCTGGTaGGGATATATGAACCACAGT +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQDNGGW*GYMNHS
Trigger: ACTGTGGTTCATATATCCCCACCAGCCGCCATTGTC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTTGCTGGAGGTGAAATaGGTCCCAGTCGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFLLEVK*VPVAEP
Trigger: TGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAATTGCTGGAGGTGAAATaGGTCCCAGTCGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPRELLEVK*VPVAEP
Trigger: TGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAA...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TTTGACTATAACTGGAAGGATGTATATCAAAATTCCACCCATGGTCGTCTCTGGTTGCTGGAGGTGAAATaGGTCCCAGTCGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: FDYNWKDVYQNSTHGRLWLLEVK*VPVAEP
Trigger: TGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAA...CCAGAGACGACCATGGGTGGAATTTTGATATACATCCTTCCAGTTATAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAGAACTCTCCGGGGGCTaGTGTGGTGAGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEELSGG*CGEEME
Trigger: CTCCATCTCCTCACCACATCAGCCCCCGGAGAGTTC...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAAGGTATCCAGGAGAGTaGGGCTCTAAATTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQRYPGE*GSKFPL
Trigger: CAAAGGGAATTTAGAGCCTCACTCTCCTGGATACCT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTTTGAACACAGTCTTTaGGGTGGAGTTACTAAACAG +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTFEHSL*GGVTKQ
Trigger: CTGTTTAGTAACTCCACCTCAAAGACTGTGTTCAAA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTCTACCTTCCCAAGATaGTCAGACAATGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQSTFPR*SDNGGW
Trigger: CCAGCCGCCATTGTCTGATCATCTTGGGAAGGTAGA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGAACGTGTCCTATCCTaGGGCTGCAATCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCERVLS*GCNLKP
Trigger: AGGCTTGAGATTGCAGCCTCAGGATAGGACACGTTC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGTTTAAACCGACAGGCTaGAGGAGGATTTTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQFKPTG*RRILGR
Trigger: CCTGCCTAAAATCCTCCTTCAGCCTGTCGGTTTAAA...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATGACGCGTCCATGAAGAGATaGAGAGCTCTATTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: MYIKIPPMVVSGDRIQDDASMKR*RALLVA
Trigger: GGCAACTAATAGAGCTCTTCATCTCTTCATGGACGC...GTCATCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACCCTGGGACCACTCCTaGTTCATGCTTGAGGCCGAC +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEPWDHS*FMLEAD
Trigger: GTCGGCCTCAAGCATGAAGCAGGAGTGGTCCCAGGG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGCTGGATGGAGCTCTGTaGTGGACCGCAACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQLDGAL*WTATFS
Trigger: GGAAAAAGTTGCGGTCCAGCACAGAGCTCCATCCAG...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGAGATGGAGCAGAAGGTaGAAACCTCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQRWSRR*KPLSSC
Trigger: GCAGGAGCTGAGAGGTTTGCACCTTCTGCTCCATCT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCAGATGGAGCAGAAGGTaGAAACCTCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCRWSRR*KPLSSC
Trigger: GCAGGAGCTGAGAGGTTTGCACCTTCTGCTCCATCT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGTTGTTAGCAAGGCTTaGCATAGTGGGACTCGATGT +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQVVSKA*HSGTRC
Trigger: ACATCGAGTCCCACTATGGCAAGCCTTGCTAACAAC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGCGTTTGGTACATCCTaGAATTTGACAAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLAFGTS*NLTSIR
Trigger: CCTTATGCTTGTCAAATTCCAGGATGTACCAAACGC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACTGTACATTATGTCCTaGAGAAGGGTGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLYIMS*RRVTDR
Trigger: CCTGTCAGTCACCCTTCTCCAGGACATAATGTACAG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGTCGAGAAGGCTCTGTaGAAAACATCAAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQVEKAL*KTSKLA
Trigger: GGCCAGTTTTGATGTTTTCCACAGAGCCTTCTCGAC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTTCCCTTGTTGTGCCTaGCTTTGCATCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQFPCCA*LCIRSS
Trigger: GCTGCTCCTGATGCAAAGCCAGGCACAACAAGGGAA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACCAGAGTGGAGGCAATaGGTAAACCAGTCAAACAAC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQPEWRQ*VNQSNN
Trigger: GTTGTTTGACTGGTTTACCCATTGCCTCCACTCTGG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCTCAGACAATGGCGGCTaGTGGGGATATATGAACCAC +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPSDNGG*WGYMNH
Trigger: GTGGTTCATATATCCCCACCAGCCGCCATTGTCTGA...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCATTCTACTGCATGTTaGAATGAACTCTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTHSTAC*NELWNQ
Trigger: CTGATTCCAGAGTTCATTCCAACATGCAGTAGAATG...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCTTTACAAGCAGCCTTaGAGTTCACTTGTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTLYKQP*SSLVKE
Trigger: TTCCTTTACAAGTGAACTCCAAGGCTGCTTGTAAAG...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAGTCTGCAGGAAGGGTaGTACTTTACAAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQSLQEG*YFTSSL
Trigger: AAGGCTGCTTGTAAAGTACCACCCTTCCTGCAGACT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCAGGAAGACTGGAGCCTaGTTCACAAGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCRKTGA*FTSSSS
Trigger: AGAGGAGCTGCTTGTGAACCAGGCTCCAGTCTTCCT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAAGGAAGACTGGAGCCTaGTTCACAAGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPRERKTGA*FTSSSS
Trigger: AGAGGAGCTGCTTGTGAACCAGGCTCCAGTCTTCCT...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTCCAGGCTACAGCTCTaGCCCAAAGCAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQSRLQL*PKAMQH
Trigger: ATGCTGCATTGCTTTGGGCCAGAGCTGTAGCCTGGA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTCCAGGCTACAGCTCTaGCCCAAAGCAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCSRLQL*PKAMQH
Trigger: ATGCTGCATTGCTTTGGGCCAGAGCTGTAGCCTGGA...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGTTCCCGATGTCCGGTaGAGACTCATGCTGCATGAT +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQVPDVR*RLMLHD
Trigger: ATCATGCAGCATGAGTCTCCACCGGACATCGGGAAC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEPMDLH*GPKPRA
Trigger: GGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACTGGCTTGCTGGAGGTaGAATGAGTCCCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCELACWR*NESQSL
Trigger: CAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTATGACAAAGGACGCATaGGGGATGCTACTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFMTKDA*GMLLAV
Trigger: CACAGCTAGTAGCATCCCTCATGCGTCCTTTGTCAT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGATGACAAAGGACGCATaGGGGATGCTACTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQMTKDA*GMLLAV
Trigger: CACAGCTAGTAGCATCCCTCATGCGTCCTTTGTCAT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAACCAGCATGCTCTCTCTaGGATAAAATGTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREPACSL*DKMSLW
Trigger: CCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGG...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAGACAATGCAGCCAATaGAATGTCTCTAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQRQCSQ*NVSRQT
Trigger: AGTCTGCCTAGAGACATTTCATTGGCTGCATTGTCT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAAGACAATGCAGCCAATaGAATGTCTCTAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQRQCSQ*NVSRQT
Trigger: AGTCTGCCTAGAGACATTTCATTGGCTGCATTGTCT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTAATGCTTCCATAAAATaGCATGGCCAAGACAGTCAA +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLNASIK*HGQDSQ
Trigger: TTGACTGTCTTGGCCATGTCATTTTATGGAAGCATT...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp AGGATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATGCCTTCAAAATAGAGTaGAGATGGCAGATGATCGAC +
Preference number: 4 (lower is better)
Translates to: RMYIKIPPMVVSGDRIQDAFKIE*RWQMID
Trigger: GTCGATCATCTGCCATCTTCACTCTATTTTGAAGGC...ATCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACTAGATTGTTGCAGCTaGCTTTTCCAATGGACTTGC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLDCCS*LFQWTC
Trigger: GCAAGTCCATTGGAAAAGGCAGCTGCAACAATCTAG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGACTGATCTGGTTGCATaGTGTAGAGACCTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQTDLVA*CRDLAC
Trigger: GCAAGCCAGGTCTCTACAGCATGCAACCAGATCAGT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAAGTGGCTACTTTCCGTaGCAAAAAGGTAGGATGGTA +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQSGYFP*QKGRMV
Trigger: TACCATCCTACCTTTTTGGCACGGAAAGTAGCCACT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGGATTTCCCTTGTTGTaGCTGGCTTTGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQGFPLL*LALHQE
Trigger: CTCCTGATGCAAAGCCAGGCACAACAAGGGAAATCC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCATATTTTCGACCAAGTaGTATGTGAAAATTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTIFSTK*YVKIPG
Trigger: GCCTGGAATTTTCACATAGCACTTGGTCGAAAATAT...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTCAGTTGCGACTTTGTaGCTCGCCTGTCCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQSVATL*LACPVH
Trigger: ATGAACAGGACAGGCGAGGCACAAAGTCGCAACTGA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR GCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCCAGCTCATTCTCCCCTaGTACACACATACACACACA +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPQLILP*YTHTHT
Trigger: TGTGTGTGTATGTGTGTAGCAGGGGAGAATGAGCTG...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAAGCTGCCTTTTCCAATaGACTTGCACTGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPRESCLFQ*TCTEAQ
Trigger: TTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCT...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGAGCTGCCTTTTCCAATaGACTTGCACTGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQSCLFQ*TCTEAQ
Trigger: TTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCATGCTGTAGAGACCTaGCTTGCTGGAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFHAVET*LAGGEM
Trigger: CATTTCACCTCCAGCAAGCCAGGTCTCTACAGCATG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGACAAGCATAAGGTTTaGTGTCCAGATGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQDKHKV*CPDASA
Trigger: AGCGGACGCATCTGGACACCAAACCTTATGCTTGTC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGACAAGCATAAGGTTTaGTGTCCAGATGCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCDKHKV*CPDASA
Trigger: AGCGGACGCATCTGGACACCAAACCTTATGCTTGTC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGGTCTGTGTAGCGTTTaGTACATCCTGGAATTTGAC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQGLCSV*YILEFD
Trigger: GTCAAATTCCAGGATGTACCAAACGCTACACAGACC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGATGGAGCTCTGTGCTaGACCGCAACTTTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFDGALC*TATFSL
Trigger: CAAGGAAAAAGTTGCGGTCCAGCACAGAGCTCCATC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGATGTGGTGAGGAGATaGAGCAGAAGGTGCAAACCT +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFDVVRR*SRRCKP
Trigger: AGGTTTGCACCTTCTGCTCCATCTCCTCACCACATC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTCAGACAATGGCGGCTaGTGGGGATATATGAACCAC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFSDNGG*WGYMNH
Trigger: GTGGTTCATATATCCCCACCAGCCGCCATTGTCTGA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCACTGTGGAGGGAGACTaGAAGGACCTGTCAGTATAC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCTVEGD*KDLSVY
Trigger: GTATACTGACAGGTCCTTCCAGTCTCCCTCCACAGT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGATAAAATGTCCCTCTaGGGCTCCACATTGATTTCC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQDKMSL*GSTLIS
Trigger: GGAAATCAATGTGGAGCCCCAGAGGGACATTTTATC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACTTAAGGCAGGCAGATaGATGCGGCTCTCAGCCACG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCELKAGR*MRLSAT
Trigger: CGTGGCTGAGAGCCGCATCCATCTGCCTGCCTTAAG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGAGATTTTCAAGCCTTaGAAAGGCCTTCTCGCAACC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFEIFKP*KGLLAT
Trigger: GGTTGCGAGAAGGCCTTTTCAAGGCTTGAAAATCTC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAAGGTATCCAGGAGAGTaGGGCTCTAAATTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPRERYPGE*GSKFPL
Trigger: CAAAGGGAATTTAGAGCCTCACTCTCCTGGATACCT...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACTCTTTTGCAGACTTTaGCGTCTACGTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLFCRL*RLRESF
Trigger: AAAGCTTTCACGTAGACGTCAAAGTCTGCAAAAGAG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCTTTCTTTCCAGAGTATaGCAAAGGACGCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPFLSRV*QRTHEG
Trigger: TCCCTCATGCGTCCTTTGTCATACTCTGGAAAGAAA...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCGAATGTGCCTTCACATaGTTTCTTAGGGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPECAFT*FLRELG
Trigger: CCCAAGTTCCCTAAGAAAGCATGTGAAGGCACATTC...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCACGACCCACAAAGTCTaGAGGAAGGGTGGTACTTTA +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCTTHKV*RKGGTL
Trigger: TAAAGTACCACCCTTCCTGCAGACTTTGTGGGTCGT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCATCCAGTATGATATATaGAGTTCATTTCTCTACGTG +
Preference number: 4 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTIQYDI*SSFLYV
Trigger: CACGTAGAGAAATGAACTGCATATATCATACTGGAT...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTCCGGTGGAGACTCATaGTGCATGATCTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQSGGDS*CMIFHS
Trigger: TGAATGGAAGATCATGCAGCATGAGTCTCCACCGGA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp TTGACTATAACTGGAAGGATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGAGGTATATTCAGGTTaGCTGCATTCATTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LTITGRMYIKIPPMVVSGEVYSG*LHSLPS
Trigger: AGAGGGCAATGAATGCAGCCAACCTGAATATACCTC...CCCAGAGACGACCATGGGTGGAATTTTGATATACATCCTTCCAGTTATAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAGTGTGGCTCCGCAAGTaGATCTTGAGATTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREVWLRK*ILRFSS
Trigger: GCTTGAAAATCTCAAGATCCACTTGCGGAGCCACAC...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCTGTACATTATGTCCTaGAGAAGGGTGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFLYIMS*RRVTDR
Trigger: CCTGTCAGTCACCCTTCTCCAGGACATAATGTACAG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCCAGAGTGGAGGCAATaGGTAAACCAGTCAAACAAC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFPEWRQ*VNQSNN
Trigger: GTTGTTTGACTGGTTTACCCATTGCCTCCACTCTGG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTTTTCCAAGGGAAGCTaGCACATGACTCAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFFSKGS*HMTQSV
Trigger: GACAGACTGAGTCATGTGCCAGCTTCCCTTGGAAAA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCAATTTGAGGGCGACATaGGTAATGGGAGATACCCCA +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCNLRAT*VMGDTP
Trigger: TGGGGTATCTCCCATTACCCATGTCGCCCTCAAATT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGAATTTGAGGGCGACATaGGTAATGGGAGATACCCCA +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQNLRAT*VMGDTP
Trigger: TGGGGTATCTCCCATTACCCATGTCGCCCTCAAATT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAGAGGGCATCTTGAGATaGAGGTTGTTAGCAAGGCTT +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREEGILR*RLLARL
Trigger: AAGCCTTGCTAACAACCTCCATCTCAAGATGCCCTC...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAATGCTTGAGGCCGACTaGCTTTCCGTCAGACTCAAG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEMLEAD*LSVRLK
Trigger: CTTGAGTCTGACGGAAAGTCAGTCGGCCTCAAGCAT...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTTTCTTTCCAGAGTATaGCAAAGGACGCATGAGGGA +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCFLSRV*QRTHEG
Trigger: TCCCTCATGCGTCCTTTGTCATACTCTGGAAAGAAA...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAATGCCTCCTTCGGAAATaGAAACCCCCATCCAAACGG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCECLLRK*KPPSKR
Trigger: CCGTTTGGATGGGGGTTTTCATTTCCGAAGGAGGCA...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp TTTGACTATAACTGGAAGGATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATaGCTGTCATTTAGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: FDYNWKDVYQNSTHGRLWGQNSG*LSFSAW
Trigger: CCAAGCACTAAATGACAGTCATCCTGAATTCTGTCC...CCAGAGACGACCATGGGTGGAATTTTGATATACATCCTTCCAGTTATAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCTAGATTGTTGCAGCTaGCTTTTCCAATGGACTTGC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCLDCCS*LFQWTC
Trigger: GCAAGTCCATTGGAAAAGGCAGCTGCAACAATCTAG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGAATGTGCCTTCACATaGTTTCTTAGGGAACTTGGG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFECAFT*FLRELG
Trigger: CCCAAGTTCCCTAAGAAAGCATGTGAAGGCACATTC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACTGGATGGAGCTCTGTaGTGGACCGCAACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCELDGAL*WTATFS
Trigger: GGAAAAAGTTGCGGTCCAGCACAGAGCTCCATCCAG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGACTAGATTGACCAAGTaGACTGTGAAAACAAAACCC +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQTRLTK*TVKTKP
Trigger: GGGTTTTGTTTTCACAGTGCACTTGGTCAATCTAGT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTACAAACAATGATGGTTaGCATTGTGTTTTAAACCGA +
Preference number: 4 (lower is better)
Translates to: VDSQEVTGIQESEALNSLTNNDG*HCVLNR
Trigger: TCGGTTTAAAACACAATGGCAACCATCATTGTTTGT...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTCTGGCCCAAAGCAATaGAGCATTTTAAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFSGPKQ*SILKLD
Trigger: GTCCAGCTTTAAAATGCTGCATTGCTTTGGGCCAGA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTCTAAAAAGTTCAGTTaGGACTTTGTGCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQSKKFS*DFVPRL
Trigger: CAGGCGAGGCACAAAGTCGCAACTGAACTTTTTAGA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTTTGACTATAACTGGAAGGATGTATATCAAAATTCCACCCATGGTCGTCTCTAAGCTAGGACTGATCTaGTTGCATGCTGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: CLTITGRMYIKIPPMVVSKLGLI*LHAVET
Trigger: GGTCTCTACAGCATGCAACCAGATCAGTCCTAGCTT...AGAGACGACCATGGGTGGAATTTTGATATACATCCTTCCAGTTATAGTCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGAGGTATATTCAGGTTaGCTGCATTCATTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQEVYSG*LHSLPS
Trigger: AGAGGGCAATGAATGCAGCCAACCTGAATATACCTC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAATGCACATCATTTCACTaGGGTCCTTTAAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPRECTSFH*GPLRVD
Trigger: GTCAACCCTTAAAGGACCCCAGTGAAATGATGTGCA...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTGCACATCATTTCACTaGGGTCCTTTAAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQCTSFH*GPLRVD
Trigger: GTCAACCCTTAAAGGACCCCAGTGAAATGATGTGCA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGTAAAATCTGAGCACTaGAAGTCAAGTATCACTAGG +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQVKSEH*KSSITR
Trigger: CCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAGAATACTTCCGCTTGTaGGACTGTGGAGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEEYFRL*DCGGRL
Trigger: CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTC...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACATTCTACTGCATGTTaGAATGAACTCTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQHSTAC*NELWNQ
Trigger: CTGATTCCAGAGTTCATTCCAACATGCAGTAGAATG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTCCGCAAGTGGATCTTaGGATTTTCAAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFSASGS*DFQALK
Trigger: TTTCAAGGCTTGAAAATCTCAAGATCCACTTGCGGA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTGTTCTTTGCAGTATTaGAGAAGGAGCTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQCSLQY*RRSWNS
Trigger: AGAGTTCCAGCTCCTTCTTCAATACTGCAAAGAACA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAACGTTAGTAAAATCTaGGCACTGGAAGTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQNVSKI*ALEVKY
Trigger: ATACTTGACTTCCAGTGCTCAGATTTTACTAACGTT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTACTGCATGTTGGAATaGACTCTGGAATCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCYCMLE*TLESGR
Trigger: TCTACCTGATTCCAGAGTTCATTCCAACATGCAGTA...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCTCTTTTGCAGACTTTaGCGTCTACGTGAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFLFCRL*RLRESF
Trigger: AAAGCTTTCACGTAGACGTCAAAGTCTGCAAAAGAG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCAATGCTTCCATAAAATaGCATGGCCAAGACAGTCAA +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPNASIK*HGQDSQ
Trigger: TTGACTGTCTTGGCCATGTCATTTTATGGAAGCATT...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGATCTTCCATTCATTCTaGAAAACCTGTGGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQIFHSF*KTCGQD
Trigger: GTCTTGGCCACAGGTTTTTCAGAATGAATGGAAGAT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGAGACTCATGCTGCATaGTCTTCCATTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFETHAA*SSIHSE
Trigger: TTCAGAATGAATGGAAGATCATGCAGCATGAGTCTC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAACCACTCCTGCTTCATaGTTGAGGCCGACTGACTTT +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCETTPAS*LRPTDF
Trigger: AAAGTCAGTCGGCCTCAAGCATGAAGCAGGAGTGGT...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTTCGGCTTGAATAATTaGTGGAGAAAATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQFGLNN*WRKWEL
Trigger: CAGCTCCCATTTTCTCCAGCAATTATTCAAGCCGAA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTGGAAAGGAAAGCCTATGTTTATTGTATATGTTTGACTATAACTGGAAGGATGAGCTGCCTTTTCCAATaGACTTGCACTGAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: VERKAYVYCICLTITGRMSCLFQ*TCTEAQ
Trigger: TTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCT...CATCCTTCCAGTTATAGTCAAACATATACAATAAACATAGGCTTTCCTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACATGCTGTAGAGACCTaGCTTGCTGGAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEHAVET*LAGGEM
Trigger: CATTTCACCTCCAGCAAGCCAGGTCTCTACAGCATG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGCGTTTGGTACATCCTaGAATTTGACAAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCAFGTS*NLTSIR
Trigger: CCTTATGCTTGTCAAATTCCAGGATGTACCAAACGC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTAGAAGAGTTTGTTTCTaGCTGATAGGACTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFRRVCF*LIGLQV
Trigger: CACCTGAAGTCCTATCAGCCAGAAACAAACTCTTCT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGAGAAGAGTTTGTTTCTaGCTGATAGGACTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQRRVCF*LIGLQV
Trigger: CACCTGAAGTCCTATCAGCCAGAAACAAACTCTTCT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAACATCAAAACTGGCCTaGCCCATGGATGTAGGGACT +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCETSKLA*PMDVGT
Trigger: AGTCCCTACATCCATGGGCCAGGCCAGTTTTGATGT...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAATACGAAAACAAAAGGTaGCAAGCAACATCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPREYENKR*QATSRS
Trigger: GGACCTTGATGTTGCTTGCCACCTTTTGTTTTCGTA...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTAAAAGACAGTCCTCCTaGTCACATAGTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFKRQSS*SHSPGK
Trigger: TTTTCCTGGACTATGTGACCAGGAGGACTGTCTTTT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAATGTTGGAATGAACTCTaGAATCAGGTAGAATACTTC +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQCWNEL*NQVEYF
Trigger: GAAGTATTCTACCTGATTCCAGAGTTCATTCCAACA...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCATACTTCAAGGCAACTaGAAAGTCAAGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KRIASFCRLFENCHLYLPILQGN*KVKVLR
Trigger: TCTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTAT...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGAAGTTATCCATGGTGTaGGTTATAAGCCAGGTAACC +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQKLSMV*VISQVT
Trigger: GGTTACCTGGCTTATAACCCACACCATGGATAACTT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CCA 90 bp ATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATGACCTGTCATTTAGTGCTTaGTACTTTTCCATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: MYIKIPPMVVSGDRIQDDLSFSA*YFSMFS
Trigger: GGAAAACATGGAAAAGTACCAAGCACTAAATGACAG...GTCATCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR TCA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGTGTTCCACTTCGGCTTaGATAATTGCTGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQCSTSA*IIAGEN
Trigger: ATTTTCTCCAGCAATTATTCAAGCCGAAGTGGAACA...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp TTGACTATAACTGGAAGGATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGACATTTTCTGGTATCTaGAGGAGGTATATTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LTITGRMYIKIPPMVVSGTFSGI*RRYIQV
Trigger: AACCTGAATATACCTCCTTCAGATACCAGAAAATGT...CCCAGAGACGACCATGGGTGGAATTTTGATATACATCCTTCCAGTTATAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR GCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTTTTTCCTTGCTTGTTaGTCTTTGGAAGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCFFLAC*SLEECA
Trigger: GGCACATTCTTCCAAAGAGCAACAAGCAAGGAAAAA...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAATCCACGGTGCTGATCTaGAAGAAGGTAGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCESTVLI*KKVASS
Trigger: TGAAGATGCTACCTTCTTGCAGATCAGCACCGTGGA...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGACAAACAATGATGGTTaGCATTGTGTTTTAAACCGA +
Preference number: 4 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQTNNDG*HCVLNR
Trigger: TCGGTTTAAAACACAATGGCAACCATCATTGTTTGT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTTGCTTGTTGCTCTTTaGAAGAATGTGCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFLLVAL*KNVPSH
Trigger: ATGTGAAGGCACATTCTTCCAAAGAGCAACAAGCAA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTTGCTTGTTGCTCTTTaGAAGAATGTGCCTTCACAT +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCLLVAL*KNVPSH
Trigger: ATGTGAAGGCACATTCTTCCAAAGAGCAACAAGCAA...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAACAAGGATAGGCTGCTaGCATATAAAACCTTATTTT +
Preference number: 4 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQTRIGC*HIKPYF
Trigger: AAAATAAGGTTTTATATGCCAGCAGCCTATCCTTGT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCTGTGTCTTTGGGACTaGCCAATTTTTATAGCTGAT +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCLCLWD*PIFIAD
Trigger: ATCAGCTATAAAAATTGGCCAGTCCCAAAGACACAG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCTGTGTCTTTGGGACTaGCCAATTTTTATAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFLCLWD*PIFIAD
Trigger: ATCAGCTATAAAAATTGGCCAGTCCCAAAGACACAG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAAGTCTGCAGGAAGGGTaGTACTTTACAAGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCESLQEG*YFTSSL
Trigger: AAGGCTGCTTGTAAAGTACCACCCTTCCTGCAGACT...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCAACGTTAGTAAAATCTaGGCACTGGAAGTCAAGTAT +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCNVSKI*ALEVKY
Trigger: ATACTTGACTTCCAGTGCTCAGATTTTACTAACGTT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTACTTTGACGTCTACGTaGAAGCTTTTCTTAGAATAC +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFTLTST*KLFLEY
Trigger: GTATTCTAAGAAAAGCTTTCACGTAGACGTCAAAGT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAACTTTGACGTCTACGTaGAAGCTTTTCTTAGAATAC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPRETLTST*KLFLEY
Trigger: GTATTCTAAGAAAAGCTTTCACGTAGACGTCAAAGT...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GTGGAAAGGAAAGCCTATGTTTATTGTATATGTTTGACTATAACTGGAAGGATGCTAGATTGTTGCAGCTaGCTTTTCCAATGGACTTGC +
Preference number: 4 (lower is better)
Translates to: VERKAYVYCICLTITGRMLDCCS*LFQWTC
Trigger: GCAAGTCCATTGGAAAAGGCAGCTGCAACAATCTAG...CATCCTTCCAGTTATAGTCAAACATATACAATAAACATAGGCTTTCCTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR GCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAATCTGCCATTCAGTCCTaGCTTCTGAAAGAACATCAG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCESAIQS*LLKEHQ
Trigger: CTGATGTTCTTTCAGAAGGCAGGACTGAATGGCAGA...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAATGTTGGAATGAACTCTaGAATCAGGTAGAATACTTC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPRECWNEL*NQVEYF
Trigger: GAAGTATTCTACCTGATTCCAGAGTTCATTCCAACA...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTATCCAGTATGATATATaGAGTTCATTTCTCTACGTG +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFIQYDI*SSFLYV
Trigger: CACGTAGAGAAATGAACTGCATATATCATACTGGAT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR GCA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAATTATTCTGTACCAAGTaGACAATCCCTTCATTTTAC +
Preference number: 4 (lower is better)
Translates to: VKSEHWKSSITRFGFPRELFCTK*TIPSFY
Trigger: GTAAAATGAAGGGATTGTGCACTTGGTACAGAATAA...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGACATGGATACCATTTaGTTGAAAAGAAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCDMDTI*LKRRVC
Trigger: ACAAACTCTTCTTTTCAACCAAATGGTATCCATGTC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGACATGGATACCATTTaGTTGAAAAGAAGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFDMDTI*LKRRVC
Trigger: ACAAACTCTTCTTTTCAACCAAATGGTATCCATGTC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAGACCACACTATGCTTTaGACATGGATTTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEDHTML*TWISLV
Trigger: AACAAGGGAAATCCATGTCCAAAGCATAGTGTGGTC...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTAACTTACTGTGTCTTTaGGACTGGCCAATTTTTATA +
Preference number: 4 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFNLLCL*DWPIFI
Trigger: TATAAAAATTGGCCAGTCCCAAAGACACAGTAAGTT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAATGTTCCACTTCGGCTTaGATAATTGCTGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCECSTSA*IIAGEN
Trigger: ATTTTCTCCAGCAATTATTCAAGCCGAAGTGGAACA...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAATACTTCAAGGCAACTaGAAAGTCAAGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEILQGN*KVKVLR
Trigger: TCTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTAT...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR TCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAAGGCTAAATTACAACTaGCATTTTGATGCAGTTTCG +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCERLNYN*HFDAVS
Trigger: CGAAACTGCATCAAAATGTCAGTTGTAATTTAGCCT...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAACAAGGATAGGCTGCTaGCATATAAAACCTTATTTT +
Preference number: 4 (lower is better)
Translates to: TENDFLFRLDIFDQVLCETRIGC*HIKPYF
Trigger: AAAATAAGGTTTTATATGCCAGCAGCCTATCCTTGT...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CCA 90 bp GTGGAAAGGAAAGCCTATGTTTATTGTATATGTTTGACTATAACTGGAAGGATGGTTTTCCACATTTTCTaGTATCTGAAGGAGGTATAT +
Preference number: 4 (lower is better)
Translates to: VERKAYVYCICLTITGRMVFHIF*YLKEVY
Trigger: ATATACCTCCTTCAGATACCAGAAAATGTGGAAAAC...CATCCTTCCAGTTATAGTCAAACATATACAATAAACATAGGCTTTCCTTTCCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS GCA 90 bp CGCGCCGCGCTCTGGGCTGCCCGGGCGGCGCAGTGTGGACGCGGCTaGAGGGAGAGGGGAAGGGGGAAGAGGGAGGGAGGAAGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: RAALWAARAAQCGRG*RERGRGKREGGRQP
Trigger: CGGCTGCCTTCCTCCCTCCCTCTTCCCCCTTCCCCTCTCCCTGCAGCCGCGTCCACACTGCGCCGCCCGGGCAGCCCAGAGCGCGGCGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381971.8
ENST00000491889.6
CDS GCA 90 bp CGCCCTTCTGGCTGCCGGGCACCGGGCGCGGCTGGGGAATGCAGCTaGCGCGCACGCCCAGGAAATGCCCGTAGACCTCCGGCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: RPSGCRAPGAAGECS*RARPGNARRPPAAG
Trigger: CCCCGCAGCCGGAGGTCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCCAGAAGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS CCA 90 bp CCTTCCCCCGGCCGGCCAGCGCGAGTGACAGCGGGCGGCCGGCGCTaGCGAGGAGTAACTTGGGGCTCCAGCCCTTCAGAGCGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: PSPGRPARVTAGGRR*RGVTWGSSPSERSA
Trigger: CGCGGAGCGCTCTGAAGGGCTGGAGCCCCAAGTTACTCCTCGCCAGCGCCGGCCGCCCGCTGTCACTCGCGCTGGCCGGCCGGGGGAAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000477901.5
ENST00000490709.1
ENST00000491889.6
CDS TCA 90 bp CCCGGGATGCTGGCTAATTGCTGCCGGCGGGTTCCGTCGCCGGTGTaGCCCTGGACGGCGCGGACGGCGTACAGGGGGTCCCGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PGMLANCCRRVPSPV*PWTARTAYRGSREG
Trigger: CCCCTCCCGGGACCCCCTGTACGCCGTCCGCGCCGTCCAGGGTCACACCGGCGACGGAACCCGCCGGCAGCAATTAGCCAGCATCCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381971.8
ENST00000491889.6
CDS GCA 90 bp CCAGCACGCCCTTCTGGCTGCCGGGCACCGGGCGCGGCTGGGGAATaGAGCTGCCGCGCACGCCCAGGAAATGCCCGTAGACCTCCGGCT +
Preference number: 5 (lower is better)
Translates to: PARPSGCRAPGAAGE*SCRARPGNARRPPA
Trigger: AGCCGGAGGTCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCCAGAAGGGCGTGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS CCA 90 bp CCAGCGCGAGTGACAGCGGGCGGCCGGCGCTGGCGAGGAGTAACTTaGGGCTCCAGCCCTTCAGAGCGCTCCGCGGGCTGTGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PARVTAGGRRWRGVT*GSSPSERSAGCASF
Trigger: GAAGGAGGCACAGCCCGCGGAGCGCTCTGAAGGGCTGGAGCCCCAAGTTACTCCTCGCCAGCGCCGGCCGCCCGCTGTCACTCGCGCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000477901.5
ENST00000490709.1
ENST00000491889.6
CDS GCA 90 bp TTGAACAGGCCGGCCGACTGGCTGTCGGGGCCCGGCAGGCCATGCTaGACCACCATGTGGTTGACCAGGCCTGGCTGCAGGCCGCCGTGC +
Preference number: 5 (lower is better)
Translates to: LNRPADWLSGPGRPC*TTMWLTRPGCRPPC
Trigger: GCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 90 bp GTCTTGAACAGGCCGGCCGACTGGCTGTCGGGGCCCGGCAGGCCATaGTGCACCACCATGTGGTTGACCAGGCCTGGCTGCAGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: VLNRPADWLSGPGRP*CTTMWLTRPGCRPP
Trigger: CGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTTCAAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS CCA 90 bp GGGGCCCGGCAGGCCATGCTGCACCACCATGTGGTTGACCAGGCCTaGCTGCAGGCCGCCGTGCTCCAGCTGTTGCATGCGCTCGTGCTC +
Preference number: 5 (lower is better)
Translates to: GARQAMLHHHVVDQA*LQAAVLQLLHALVL
Trigger: GAGCACGAGCGCATGCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS TCA 90 bp GTAGGTCTACGGTGCTGCCCGGGAACTCCTCCAGGCGTTCGGTCTTaGACAGGCCGGCCGACTGGCTGTCGGGGCCCGGCAGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: VGLRCCPGTPPGVRS*TGRPTGCRGPAGHA
Trigger: AGCATGGCCTGCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 90 bp CCCGGCAGGCCATGCTGCACCACCATGTGGTTGACCAGGCCTGGCTaGAGGCCGCCGTGCTCCAGCTGTTGCATGCGCTCGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGRPCCTTMWLTRPG*RPPCSSCCMRSCSR
Trigger: CCTGGAGCACGAGCGCATGCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS CCA 90 bp CCCGGGAACTCCTCCAGGCGTTCGGTCTTGAACAGGCCGGCCGACTaGCTGTCGGGGCCCGGCAGGCCATGCTGCACCACCATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: PGNSSRRSVLNRPAD*LSGPGRPCCTTMWL
Trigger: CAACCACATGGTGGTGCAGCATGGCCTGCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 90 bp GCTGGTCGTACAGGGCGCTGCAGTCGATCCAGCGGCAGCAATGCTTaGCCCCGATGCCGTCCATCTCCCCGTCGTCGTCCAGGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: AGRTGRCSRSSGSNA*PRCRPSPRRRPGWP
Trigger: AGGCCACCCTGGACGACGACGGGGAGATGGACGGCATCGGGGGCAAGCATTGCTGCCGCTGGATCGACTGCAGCGCCCTGTACGACCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS-3UTR CAA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGCCGTGCTCCAGCTGTaGCATGCGCTCGTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPAVLQL*HALVLQ
Trigger: CTGGAGCACGAGCGCATGCAACAGCTGGAGCACGGC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS GCA 90 bp CCCACGGTCCCTTCAGCAGCAGCATCTCTAGGGGAAGTGGCCGGCTaGAGGGACTGCACGGTGAGGCAATCTGTGAGCAGGTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: PTVPSAAASLGEVAG*RDCTVRQSVSRSGW
Trigger: CCATCCAGACCTGCTCACAGATTGCCTCACCGTGCAGTCCCTGCAGCCGGCCACTTCCCCTAGAGATGCTGCTGCTGAAGGGACCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000463680.6
ENST00000464391.2
ENST00000467497.6
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682864.1
CDS TCA 90 bp GGACAGCGCTCTCTTCTTGGAGCGGGCCGAGTGGGACCTGGTGGATaGGTGCCGAGGACTAGGGTAAGGAGAGTGGCTACTTTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: GQRSLLGAGRVGPGG*VPRTRVRRVATFRA
Trigger: GGCACGGAAAGTAGCCACTCTCCTTACCCTAGTCCTCGGCACTCATCCACCAGGTCCCACTCGGCCCGCTCCAAGAAGAGAGCGCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000490709.1
ENST00000491889.6
ENST00000682749.1
CDS GCA 90 bp GCAAACGTGCCCCATTGTGCCTCTCCAATCTGCCCGAGCCACACCTaGTGCCGGCCTTCTTCCTGCTCTCCACCTGGTCCAAGAAGAGTC +
Preference number: 5 (lower is better)
Translates to: ANVPHCASPICPSHT*CRPSSCSPPGPRRV
Trigger: GACTCTTCTTGGACCAGGTGGAGAGCAGGAAGAAGGCCGGCAGCAGGTGTGGCTCGGGCAGATTGGAGAGGCACAATGGGGCACGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGGCTGCGGGGACAGGTaGGCCGGCGAAGCCCTCGAC +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLGCGDR*AGEALD
Trigger: GTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGCC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS GCA 90 bp AACGTGCCCCATTGTGCCTCTCCAATCTGCCCGAGCCACACCTGCTaGCGGCCTTCTTCCTGCTCTCCACCTGGTCCAAGAAGAGTCACT +
Preference number: 5 (lower is better)
Translates to: NVPHCASPICPSHTC*RPSSCSPPGPRRVT
Trigger: AGTGACTCTTCTTGGACCAGGTGGAGAGCAGGAAGAAGGCCGGCAGCAGGTGTGGCTCGGGCAGATTGGAGAGGCACAATGGGGCACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS-3UTR CAA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTCAGCGGCAGCAATGCTaGCCCCCGATGCCGTCCATC +
Preference number: 5 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAQRQQC*PPMPSI
Trigger: GATGGACGGCATCGGGGGCAAGCATTGCTGCCGCTG...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS TCA 90 bp GGGCTTAAGGCAGGCAGATGGATGCGGCTCTCAGCCACGTTGTTCTaGGGAGCCATCCCTCCTCCTGAGGGCATCTTGAGATGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GLKAGRWMRLSATLF*GAIPPPEGILRWRL
Trigger: CAACCTCCATCTCAAGATGCCCTCAGGAGGAGGGATGGCTCCTCAGAACAACGTGGCTGAGAGCCGCATCCATCTGCCTGCCTTAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS GCA 90 bp CTCTCTATTTGTCTAGCAAACGTGCCCCATTGTGCCTCTCCAATCTaGCCGAGCCACACCTGCTGCCGGCCTTCTTCCTGCTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: LSICLANVPHCASPI*PSHTCCRPSSCSPP
Trigger: AGGTGGAGAGCAGGAAGAAGGCCGGCAGCAGGTGTGGCTCGGGCAGATTGGAGAGGCACAATGGGGCACGTTTGCTAGACAAATAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGCCGTGCTCCAGCTGTaGCATGCGCTCGTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLAVLQL*HALVLQ
Trigger: CTGGAGCACGAGCGCATGCAACAGCTGGAGCACGGC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCGACAGCGCTCTCTTCTaGGAGCGGGCCGAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTDSALF*ERAEWD
Trigger: GTCCCACTCGGCCCGCTCCAAGAAGAGAGCGCTGTC...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGGCTGCGGGGACAGGTaGGCCGGCGAAGCCCTCGAC +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQGCGDR*AGEALD
Trigger: GTCGAGGGCTTCGCCGGCCAACCTGTCCCCGCAGCC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS TCA 90 bp GATGCGGCTCTCAGCCACGTTGTTCTGAGGAGCCATCCCTCCTCCTaGGGGCATCTTGAGATGGAGGTTGTTAGCAAGGCTTGCCATAGT +
Preference number: 5 (lower is better)
Translates to: DAALSHVVLRSHPSS*GHLEMEVVSKACHS
Trigger: ACTATGGCAAGCCTTGCTAACAACCTCCATCTCAAGATGCCCTCAGGAGGAGGGATGGCTCCTCAGAACAACGTGGCTGAGAGCCGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS GCA 90 bp TCTTTGTGCCTGTCTCTCTATTTGTCTAGCAAACGTGCCCCATTGTaGCTCTCCAATCTGCCCGAGCCACACCTGCTGCCGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLCLSLYLSSKRAPL*LSNLPEPHLLPAFF
Trigger: GAAGAAGGCCGGCAGCAGGTGTGGCTCGGGCAGATTGGAGAGGCACAATGGGGCACGTTTGCTAGACAAATAGAGAGACAGGCACAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS CCA 90 bp GGCTTTAAAGTATGTGACCCTGACATGCCTCCAGCCTGGGTGACCTaGAATCGCGGCTTCCCATTGGTGAGCATTTGTCTCCTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: GFKVCDPDMPPAWVT*NRGFPLVSICLLGL
Trigger: AAGCCCCAGGAGACAAATGCTCACCAATGGGAAGCCGCGATTCCAGGTCACCCAGGCTGGAGGCATGTCAGGGTCACATACTTTAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS-3UTR CAA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTACCGCAACTTTTTCCTaGCTTGTTGCTCTTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPTATFS*LVALWK
Trigger: CTTCCAAAGAGCAACAAGCAAGGAAAAAGTTGCGGT...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGGTCTTTTTCCCTGTTaGGAGTTTTCAGGTAGAGTC +
Preference number: 5 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPGLFPC*EFSGRV
Trigger: GACTCTACCTGAAAACTCCAAACAGGGAAAAAGACC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTCAAGTATCACTAGGTTaGGTTTTCCAAGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPQVSLG*VFQGKL
Trigger: CAGCTTCCCTTGGAAAACCAAACCTAGTGATACTTG...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTGCAGCTATCAGGAAAGACCCACGGTGCGGGAAGCAGGGCTGCACTGGGTCCTGCTAACTCATCTCTTTaGCAGACTTTGACGTCTACG +
Preference number: 5 (lower is better)
Translates to: LQLSGKTHGAGSRAALGPANSSL*QTLTST
Trigger: CGTAGACGTCAAAGTCTGCAAAAGAGATGAGTTAGC...AGGACCCAGTGCAGCCCTGCTTCCCGCACCGTGGGTCTTTCCTGATAGCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS TCA 90 bp AGGACTGATCTGGTTGCATGCTGTAGAGACCTGGCTTGCTGGAGGTaGAATGAGTCCCAGTCGCTGAACCATCATGGGACTGCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: RTDLVACCRDLACWR*NESQSLNHHGTAGD
Trigger: GTCACCAGCAGTCCCATGATGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAGGTCTCTACAGCATGCAACCAGATCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000462164.5
ENST00000477901.5
ENST00000478315.5
ENST00000478844.5
ENST00000481827.5
ENST00000645097.1
ENST00000682749.1
ENST00000682846.1
ENST00000683998.1
CDS-3UTR CAA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTTGCACCACCATGTGGTaGACCAGGCCTGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VDSQEVTGIQESEALNSLCTTMW*TRPGCR
Trigger: CCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCA...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTGCGTCCGCTGGTGTTaGGCGCGGTCACTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTCVRWC*ARSLEL
Trigger: TAACTCCAGTGACCGCGCCAAACACCAGCGGACGCA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGTAGAATACTTCCGCTaGTGGGACTGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: TGSCGQHALSEIKCPSGAVEYFR*WDCGGR
Trigger: TCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTAC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS TCA 90 bp GTGTTCTTTGCAGTATTGAAGAAGGAGCTGGAACTCTCCGGGGGCTaGTGTGGTGAGGAGATGGAGCAGAAGGTGCAAACCTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: VFFAVLKKELELSGG*CGEEMEQKVQTSQL
Trigger: GAGCTGAGAGGTTTGCACCTTCTGCTCCATCTCCTCACCACATCAGCCCCCGGAGAGTTCCAGCTCCTTCTTCAATACTGCAAAGAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000464391.2
ENST00000467497.6
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682864.1
CDS TCA 90 bp GTGACCACTAGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCAGGTAACCGGGATTTCCACAAC +
Preference number: 5 (lower is better)
Translates to: VTTRLLQLPFPMDLH*GPKPRAPGNRDFHN
Trigger: GTTGTGGAAATCCCGGTTACCTGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCTAGTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682749.1
CDS CCA 90 bp TGCTGCTTTGGCTTTAAAGTATGTGACCCTGACATGCCTCCAGCCTaGGTGACCTGGAATCGCGGCTTCCCATTGGTGAGCATTTGTCTC +
Preference number: 5 (lower is better)
Translates to: CCFGFKVCDPDMPPA*VTWNRGFPLVSICL
Trigger: GAGACAAATGCTCACCAATGGGAAGCCGCGATTCCAGGTCACCCAGGCTGGAGGCATGTCAGGGTCACATACTTTAAAGCCAAAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS-3UTR CAA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGACAGCGCTCTCTTCTaGGAGCGGGCCGAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQDSALF*ERAEWD
Trigger: GTCCCACTCGGCCCGCTCCAAGAAGAGAGCGCTGTC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGTCCAGGCGTTCGGTCTaGAACAGGCCGGCCGACTGG +
Preference number: 5 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQSRRSV*NRPADW
Trigger: CCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGA...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGTTGTTGTGCCTGGCTTaGCATCAGGAGCAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLLLCLA*HQEQQG
Trigger: CCCTTGCTGCTCCTGATGCAAAGCCAGGCACAACAA...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS GCA 90 bp AGAGCCCCTTTCCCAGGATTTGGAGGAAAAGGGCTTCCAAACTCCTaGTGCTTTGGCTTTAAAGTATGTGACCCTGACATGCCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RAPFPGFGGKGLPNS*CFGFKVCDPDMPPA
Trigger: GGCTGGAGGCATGTCAGGGTCACATACTTTAAAGCCAAAGCAGCAGGAGTTTGGAAGCCCTTTTCCTCCAAATCCTGGGAAAGGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381971.8
ENST00000477901.5
ENST00000481827.5
CDS CCA 90 bp AAACAAAAGGTGGCAAGCAACATCAAGGTCCTGGGTGTGCAGGAGTaGCCAAGAGAGCTTTTAGCCTTCGGTGTAGACAGAGGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: KQKVASNIKVLGVQE*PRELLAFGVDRGEL
Trigger: CAGCTCTCCTCTGTCTACACCGAAGGCTAAAAGCTCTCTTGGCCACTCCTGCACACCCAGGACCTTGATGTTGCTTGCCACCTTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682846.1
ENST00000682864.1
ENST00000683926.1
CDS CCA 90 bp CCTTTCTGCCCTCAGGAGCCCTTTAACCTCAACCTGAGCACTTCTTaGGGGAAGAGTTCAACAGCACAATTCCTCACACCCCAGAGTATG +
Preference number: 5 (lower is better)
Translates to: PFCPQEPFNLNLSTS*GKSSTAQFLTPQSM
Trigger: CATACTCTGGGGTGTGAGGAATTGTGCTGTTGAACTCTTCCCCCAAGAAGTGCTCAGGTTGAGGTTAAAGGGCTCCTGAGGGCAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGCCTCCTGAGGGCATCTaGAGATGGAGGTTGTTAGCA +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLPPEGI*RWRLLA
Trigger: TGCTAACAACCTCCATCTCAAGATGCCCTCAGGAGG...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS TCA 90 bp GTGACCACTAGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCTTTCCCAGGATTTGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: VTTRLLQLPFPMDLH*GPKPRAPFPGFGGK
Trigger: TTTTCCTCCAAATCCTGGGAAAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCTAGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381971.8
ENST00000477901.5
ENST00000481827.5
CDS TCA 90 bp AAGGTTTCTTTCCTGCCAGTTCAGCACCCTCGGGAAACAGCTTTCTaGGGTTATCTCACGATCCAAGTGCCTGTTGGAACTCCAGCCATC +
Preference number: 5 (lower is better)
Translates to: KVSFLPVQHPRETAF*GYLTIQVPVGTPAI
Trigger: GATGGCTGGAGTTCCAACAGGCACTTGGATCGTGAGATAACCTCAGAAAGCTGTTTCCCGAGGGTGCTGAACTGGCAGGAAAGAAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS TCA 90 bp GTGACCACTAGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCTCTATTAGTTGCCACTTCAGCA +
Preference number: 5 (lower is better)
Translates to: VTTRLLQLPFPMDLH*GPKPRAPLLVATSA
Trigger: TGCTGAAGTGGCAACTAATAGAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCTAGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682846.1
ENST00000683998.1
CDS GCA 90 bp AAGGGACCTTTCCCAGGATTTGGAGGAAAAGGGCTTCCAAACTCCTaGTGCTTTGGCTTTAAAGTATGTGACCCTGACATGCCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: KGPFPGFGGKGLPNS*CFGFKVCDPDMPPA
Trigger: GGCTGGAGGCATGTCAGGGTCACATACTTTAAAGCCAAAGCAGCAGGAGTTTGGAAGCCCTTTTCCTCCAAATCCTGGGAAAGGTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491889.6
CDS CCA 90 bp GGCCTTCTCGCAACCTTCAAACCTTCAGGGATCCTTTGGTCGTGTTaGCTGTCCTCGGGGATTCACAGAAAGCGGTATCACAATTTTTCC +
Preference number: 5 (lower is better)
Translates to: GLLATFKPSGILWSC*LSSGIHRKRYHNFS
Trigger: GGAAAAATTGTGATACCGCTTTCTGTGAATCCCCGAGGACAGCCAACACGACCAAAGGATCCCTGAAGGTTTGAAGGTTGCGAGAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGGAGGTATATTCAGGTaGGCTGCATTCATTGCCCTC +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLGGIFR*AAFIAL
Trigger: GAGGGCAATGAATGCAGCCAACCTGAATATACCTCC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCAGCGGCAGCAATGCTaGCCCCCGATGCCGTCCATC +
Preference number: 5 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFQRQQC*PPMPSI
Trigger: GATGGACGGCATCGGGGGCAAGCATTGCTGCCGCTG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCCTTCAAACGTACACTaGTTGGGCTTCTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTPSNVH*LGFSPE
Trigger: CTCTGGGGAGAAGCCCAACAAGTGTACGTTTGAAGG...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAATGCGTCCGCTGGTGTTaGGCGCGGTCACTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQCVRWC*ARSLEL
Trigger: TAACTCCAGTGACCGCGCCAAACACCAGCGGACGCA...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTCTTGCTTGTTGCTCTTaGGAAGAATGTGCCTTCACA +
Preference number: 5 (lower is better)
Translates to: TGSCGQHALSEIKCPSGALACCS*EECAFT
Trigger: TGTGAAGGCACATTCTTCCAAAGAGCAACAAGCAAG...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp ACTGGGTCCTGTGGCCAGCATGCTCTCTCTGAGATAAAATGTCCCTCTGGGGCTGATCGCTTATGTAATTaGAGGGCGACATGGGTAATG +
Preference number: 5 (lower is better)
Translates to: TGSCGQHALSEIKCPSGADRLCN*RATWVM
Trigger: CATTACCCATGTCGCCCTCAAATTACATAAGCGATC...AGCCCCAGAGGGACATTTTATCTCAGAGAGAGCATGCTGGCCACAGGACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACTGGCGAGGAGTAACTaGGGGCTCCAGCCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLARSN*GLQPFR
Trigger: TCTGAAGGGCTGGAGCCCCAAGTTACTCCTCGCCAG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CAA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCAATCGCGGCTTCCCATaGGTGAGCATTTGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTNRGFP*VSICLL
Trigger: CAGGAGACAAATGCTCACCAATGGGAAGCCGCGATT...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS-3UTR CAA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCCCCCTTTCCCAGGATTaGGAGGAAAAGGGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTPLSQD*EEKGFQ
Trigger: TTGGAAGCCCTTTTCCTCCAAATCCTGGGAAAGGGG...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS TCA 90 bp ACTCAAAGCCCTTGTCTAGGTCTCACACTTGGCAGCTGGAGAGGCTaGATTGAGACAATTTTAGAACCCAGACCCCAGAGCCAAACTGCT +
Preference number: 5 (lower is better)
Translates to: TQSPCLGLTLGSWRG*IETILEPRPQSQTA
Trigger: AGCAGTTTGGCTCTGGGGTCTGGGTTCTAAAATTGTCTCAATTCAGCCTCTCCAGCTGCCAAGTGTGAGACCTAGACAAGGGCTTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS GCA 90 bp ATCCTACCTTTCCCAGGATTTGGAGGAAAAGGGCTTCCAAACTCCTaGTGCTTTGGCTTTAAAGTATGTGACCCTGACATGCCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ILPFPGFGGKGLPNS*CFGFKVCDPDMPPA
Trigger: GGCTGGAGGCATGTCAGGGTCACATACTTTAAAGCCAAAGCAGCAGGAGTTTGGAAGCCCTTTTCCTCCAAATCCTGGGAAAGGTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465708.5
ENST00000471664.1
CDS CCA 90 bp TTCAGGTTGGCTGCATTCATTGCCCTCTGTAAGCTAGGACTGATCTaGTTGCATGCTGTAGAGACCTGGCTTGCTGGAGGTGAAATGAGT +
Preference number: 5 (lower is better)
Translates to: FRLAAFIALCKLGLI*LHAVETWLAGGEMS
Trigger: ACTCATTTCACCTCCAGCAAGCCAGGTCTCTACAGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000462164.5
ENST00000477901.5
ENST00000478315.5
ENST00000478844.5
ENST00000481827.5
ENST00000645097.1
ENST00000682749.1
ENST00000682846.1
ENST00000683998.1
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGTGACCACTAGATTGTaGCAGCTGCCTTTTCCAATG +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLVTTRL*QLPFPM
Trigger: CATTGGAAAAGGCAGCTGCAACAATCTAGTGGTCAC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGTGCGGATGATGGTATaGAAATCTATCCCGATGCCA +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLVRMMV*KSIPMP
Trigger: TGGCATCGGGATAGATTTCAATACCATCATCCGCAC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTTGCACCACCATGTGGTaGACCAGGCCTGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFCTTMW*TRPGCR
Trigger: CCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCA...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGGCTCTAAATTCCCTTaGAAAAGACAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLGSKFP*KRQSSW
Trigger: CCAGGAGGACTGTCTTTTCAAAGGGAATTTAGAGCC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCCAGCTACAGGACTGTaGGTGCGGGAGGTGCCCACT +
Preference number: 5 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCPATGL*VREVPT
Trigger: AGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTGG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGCCAGCTACAGGACTGTaGGTGCGGGAGGTGCCCACT +
Preference number: 5 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQPATGL*VREVPT
Trigger: AGTGGGCACCTCCCGCACCAACAGTCCTGTAGCTGG...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS TCA 90 bp GTGACCACTAGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCTAGACAACAAACAAGTAACACA +
Preference number: 5 (lower is better)
Translates to: VTTRLLQLPFPMDLH*GPKPRAPRQQTSNT
Trigger: TGTGTTACTTGTTTGTTGTCTAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCTAGTGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324333.14
CDS-3UTR CAA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTCTGGTGACCACTAGATaGTTGCAGCTGCCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: VDSQEVTGIQESEALNSLLVTTR*LQLPFP
Trigger: TGGAAAAGGCAGCTGCAACAATCTAGTGGTCACCAG...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGACTCCTGCTTCATGCTaGAGGCCGACTGACTTTCCG +
Preference number: 5 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQTPASC*RPTDFP
Trigger: CGGAAAGTCAGTCGGCCTCAAGCATGAAGCAGGAGT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTGAGTTAGAGACACTATaGCTGGACATGGATGTCCCG +
Preference number: 5 (lower is better)
Translates to: VDSQEVTGIQESEALNSLELETL*LDMDVP
Trigger: CGGGACATCCATGTCCAGCAATAGTGTCTCTAACTC...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAACGGGCGTTGAAGGGCTaGTATCTTCGAGGGCAACCG +
Preference number: 5 (lower is better)
Translates to: VKSEHWKSSITRFGFPRERALKG*YLRGQP
Trigger: CGGTTGCCCTCGAAGATACAAGCCCTTCAACGCCCG...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCGGGCGTTGAAGGGCTaGTATCTTCGAGGGCAACCG +
Preference number: 5 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFRALKG*YLRGQP
Trigger: CGGTTGCCCTCGAAGATACAAGCCCTTCAACGCCCG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGGGTCTTTTTCCCTGTTaGGAGTTTTCAGGTAGAGTC +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLGLFPC*EFSGRV
Trigger: GACTCTACCTGAAAACTCCAAACAGGGAAAAAGACC...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAATTGTTGTGCCTGGCTTaGCATCAGGAGCAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLLCLA*HQEQQG
Trigger: CCCTTGCTGCTCCTGATGCAAAGCCAGGCACAACAA...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGCCATGGTTTCTAAAGTaGAGCTTCTGTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLPWFLK*SFCLVL
Trigger: GAGGACAAGACAGAAGCTCAACTTTAGAAACCATGG...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGCAAACTCCTGCTGCTTaGGCTTTAAAGTATGTGACC +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLQTPAA*ALKYVT
Trigger: GGTCACATACTTTAAAGCCAAAGCAGCAGGAGTTTG...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS GCA 90 bp AAATCTATCCATTTACTCAAGGCTCACTCAGGTGGAACCTCCTGCTaGCTGCCCACATCCCTCTGTCACAATGAATCCTTCTTTCCTACA +
Preference number: 5 (lower is better)
Translates to: KSIHLLKAHSGGTSC*LPTSLCHNESFFPT
Trigger: TGTAGGAAAGAAGGATTCATTGTGACAGAGGGATGTGGGCAGGCAGCAGGAGGTTCCACCTGAGTGAGCCTTGAGTAAATGGATAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CCA 90 bp TACTACCAGAGAAAGACAGGCGATATAAAATCAGAGTTTAGAGCCTaGAGAGATGACATCAGCTGGGGGATCAGGAAGGGCTTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: YYQRKTGDIKSEFRA*RDDISWGIRKGFRE
Trigger: CTCTCTGAAGCCCTTCCTGATCCCCCAGCTGATGTCATCTCTCCAGGCTCTAAACTCTGATTTTATATCGCCTGTCTTTCTCTGGTAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464391.2
ENST00000467497.6
CDS CCA 90 bp TTGTGTACCTGTGTGGGTATAGATTGTTTATATCTTGCCCTTGGCTaGGGGCCTCAGACAGCTGTGCAGAGTACTTGGCATACATTTCCA +
Preference number: 5 (lower is better)
Translates to: LCTCVGIDCLYLALG*GPQTAVQSTWHTFP
Trigger: TGGAAATGTATGCCAAGTACTCTGCACAGCTGTCTGAGGCCCCCAGCCAAGGGCAAGATATAAACAATCTATACCCACACAGGTACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS CCA 90 bp GTATGTGGCATACCCGCTGTTCCTAGGTGGAATCTTCAACAGTTTTaGCCTTTTGAAGACCTGAGCTGTATACCTCTTCTTGCTCATGGC +
Preference number: 5 (lower is better)
Translates to: VCGIPAVPRWNLQQF*PFEDLSCIPLLAHG
Trigger: GCCATGAGCAAGAAGAGGTATACAGCTCAGGTCTTCAAAAGGCCAAAACTGTTGAAGATTCCACCTAGGAACAGCGGGTATGCCACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS-3UTR CAA 90 bp TGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATGACTCTAGGACTGATCTGGTaGCATGCTGTAGAGACCTGG +
Preference number: 5 (lower is better)
Translates to: CISKFHPWSSLGTEFRMTLGLIW*HAVETW
Trigger: CCAGGTCTCTACAGCATGCAACCAGATCAGTCCTAG...AGTCATCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR CAA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAATCCAGGCGTTCGGTCTaGAACAGGCCGGCCGACTGG +
Preference number: 5 (lower is better)
Translates to: TENDFLFRLDIFDQVLCESRRSV*NRPADW
Trigger: CCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGA...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAACTCTGGAATCAGGTAGAATACTTCCGCTTGTGGGACTGTGGAGGGAGACTGCTGTTCCACTTCGGCTaGAATAATTGCTGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ELWNQVEYFRLWDCGGRLLFHFG*NNCWRK
Trigger: TTTTCTCCAGCAATTATTCAAGCCGAAGTGGAACAG...CAGTCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTACCTGATTCCAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCAGAGGCTCGAGGAACTaGAAGGTAAATCATACACTG +
Preference number: 5 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTRGSRN*KVNHTL
Trigger: CAGTGTATGATTTACCTTCAAGTTCCTCGAGCCTCT...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACTGCAGGTGCCTCTATaGCTTACGCCCTCTTTAGAG +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLQVPL*LTPSLE
Trigger: CTCTAAAGAGGGCGTAAGCAATAGAGGCACCTGCAG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS TCA 90 bp TGCTCCCAGATCCCCCACAGGATCTGTGATTTTAGACTTGGGCTCTaGAAACTGGTGAATCAACTGCTCATAGACCAAACACCACACTAT +
Preference number: 5 (lower is better)
Translates to: CSQIPHRICDFRLGL*KLVNQLLIDQTPHY
Trigger: ATAGTGTGGTGTTTGGTCTATGAGCAGTTGATTCACCAGTTTTCAGAGCCCAAGTCTAAAATCACAGATCCTGTGGGGGATCTGGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462164.5
ENST00000473846.5
CDS TCA 90 bp CTGTTCCTAGGTGGAATCTTCAACAGTTTTGGCCTTTTGAAGACCTaGGCTGTATACCTCTTCTTGCTCATGGCTCCTCAATCCTGCACT +
Preference number: 5 (lower is better)
Translates to: LFLGGIFNSFGLLKT*AVYLFLLMAPQSCT
Trigger: AGTGCAGGATTGAGGAGCCATGAGCAAGAAGAGGTATACAGCTCAGGTCTTCAAAAGGCCAAAACTGTTGAAGATTCCACCTAGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS GCA 90 bp TGCTGCCACACCCAGCTCAGGAATCAGAAGGGGTGGAGAGCAATTTaGAGCCCATTGATAAAGAACAACACAGACGATCTTAGGAAAATT +
Preference number: 5 (lower is better)
Translates to: CCHTQLRNQKGWRAI*SPLIKNNTDDLRKI
Trigger: AATTTTCCTAAGATCGTCTGTGTTGTTCTTTATCAATGGGCTGCAAATTGCTCTCCACCCCTTCTGATTCCTGAGCTGGGTGTGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463680.6
CDS CCA 90 bp CATAAAATCCTGAAACGCAAGCATGGCATTGAGCACAAGTTCCTTTaGGCACAAGTTCCACAGATCATTCCAACCCAGCTAGAACCTCAC +
Preference number: 5 (lower is better)
Translates to: HKILKRKHGIEHKFL*AQVPQIIPTQLEPH
Trigger: GTGAGGTTCTAGCTGGGTTGGAATGATCTGTGGAACTTGTGCCCAAAGGAACTTGTGCTCAATGCCATGCTTGCGTTTCAGGATTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS-3UTR CAA 90 bp TGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATGACTGGAGGTATATTCAGGTaGGCTGCATTCATTGCCCTC +
Preference number: 5 (lower is better)
Translates to: CISKFHPWSSLGTEFRMTGGIFR*AAFIAL
Trigger: GAGGGCAATGAATGCAGCCAACCTGAATATACCTCC...AGTCATCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR CAA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTACTCCTGCTTCATGCTaGAGGCCGACTGACTTTCCG +
Preference number: 5 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFTPASC*RPTDFP
Trigger: CGGAAAGTCAGTCGGCCTCAAGCATGAAGCAGGAGT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGAGTTAGAGACACTATaGCTGGACATGGATGTCCCG +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQELETL*LDMDVP
Trigger: CGGGACATCCATGTCCAGCAATAGTGTCTCTAACTC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCCCTTCAAACGTACACTaGTTGGGCTTCTCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: KRIASFCRLFENCHLYLPPSNVH*LGFSPE
Trigger: CTCTGGGGAGAAGCCCAACAAGTGTACGTTTGAAGG...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTCCATGGTTTCTAAAGTaGAGCTTCTGTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: VDSQEVTGIQESEALNSLPWFLK*SFCLVL
Trigger: GAGGACAAGACAGAAGCTCAACTTTAGAAACCATGG...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCCTGCAGGTGCCTCTATaGCTTACGCCCTCTTTAGAG +
Preference number: 5 (lower is better)
Translates to: KRIASFCRLFENCHLYLPLQVPL*LTPSLE
Trigger: CTCTAAAGAGGGCGTAAGCAATAGAGGCACCTGCAG...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTATTTTAAAGCTGGACTaGAACATTCCCTCCCGCATC +
Preference number: 5 (lower is better)
Translates to: VDSQEVTGIQESEALNSLILKLD*NIPSRI
Trigger: GATGCGGGAGGGAATGTTCAAGTCCAGCTTTAAAAT...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS TCA 90 bp CCGATGTCCGGTGGAGACTCATGCTGCATGATCTTCCATTCATTCTaGAAAACCTGTGGCCAAGACGGTCAAATATCCAATGTCACTAAT +
Preference number: 5 (lower is better)
Translates to: PMSGGDSCCMIFHSF*KTCGQDGQISNVTN
Trigger: ATTAGTGACATTGGATATTTGACCGTCTTGGCCACAGGTTTTTCAGAATGAATGGAAGATCATGCAGCATGAGTCTCCACCGGACATCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS TCA 90 bp GTGACCACTAGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCTGTATTATATTTCTTTAGAACT +
Preference number: 5 (lower is better)
Translates to: VTTRLLQLPFPMDLH*GPKPRAPVLYFFRT
Trigger: AGTTCTAAAGAAATATAATACAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCTAGTGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462164.5
CDS GCA 90 bp AGAAGTAAGAAGTCCTTGCACTGCGGGGCTTCCATATGCAGTGTCTaGTTGTGTACCTGTGTGGGTATAGATTGTTTATATCTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: RSKKSLHCGASICSV*LCTCVGIDCLYLAL
Trigger: AAGGGCAAGATATAAACAATCTATACCCACACAGGTACACAAGCAGACACTGCATATGGAAGCCCCGCAGTGCAAGGACTTCTTACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS CCA 90 bp CAAGGGACTGCCAGCTTCTTGCTTACCATGGACATGGATACCATTTaGTTGAAAAGAAGAGTTTGTTTCTGGCTGATAGGACTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: QGTASFLLTMDMDTI*LKRRVCFWLIGLQV
Trigger: CACCTGAAGTCCTATCAGCCAGAAACAAACTCTTCTTTTCAACCAAATGGTATCCATGTCCATGGTAAGCAAGAAGCTGGCAGTCCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464391.2
ENST00000467497.6
CDS-3UTR CAA 90 bp ATGTATATCAAAATTCCACCCATGGTCGTCTCTGGGGACAGAATTCAGGATGACGTGACCACTAGATTGTaGCAGCTGCCTTTTCCAATG +
Preference number: 5 (lower is better)
Translates to: MYIKIPPMVVSGDRIQDDVTTRL*QLPFPM
Trigger: CATTGGAAAAGGCAGCTGCAACAATCTAGTGGTCAC...GTCATCCTGAATTCTGTCCCCAGAGACGACCATGGGTGGAATTTTGATATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS-3UTR CAA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAACTAGGACTGATCTGGTaGCATGCTGTAGAGACCTGG +
Preference number: 5 (lower is better)
Translates to: VKSEHWKSSITRFGFPRELGLIW*HAVETW
Trigger: CCAGGTCTCTACAGCATGCAACCAGATCAGTCCTAG...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCTAGGACTGATCTGGTaGCATGCTGTAGAGACCTGG +
Preference number: 5 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCLGLIW*HAVETW
Trigger: CCAGGTCTCTACAGCATGCAACCAGATCAGTCCTAG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAGGCTCTAAATTCCCTTaGAAAAGACAGTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQGSKFP*KRQSSW
Trigger: CCAGGAGGACTGTCTTTTCAAAGGGAATTTAGAGCC...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAGTAGAATACTTCCGCTaGTGGGACTGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: VKSEHWKSSITRFGFPREVEYFR*WDCGGR
Trigger: TCTCCCTCCACAGTCCCACAAGCGGAAGTATTCTAC...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTCTCAGAGAAACTAGATaGACCAAGTGCACTGTGAAA +
Preference number: 5 (lower is better)
Translates to: VDSQEVTGIQESEALNSLLRETR*TKCTVK
Trigger: TTTCACAGTGCACTTGGTCAATCTAGTTTCTCTGAG...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTACTTTACAAGCAGCCTaGGAGTTCACTTGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: VDSQEVTGIQESEALNSLTLQAA*EFTCKG
Trigger: TCCTTTACAAGTGAACTCCAAGGCTGCTTGTAAAGT...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGCATATGTTAGGCCACTaGTTTAGGCCAAGTGACACG +
Preference number: 5 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQHMLGH*FRPSDT
Trigger: CGTGTCACTTGGCCTAAACAAGTGGCCTAACATATG...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTAGCTGTGAGCATGCATATGTTAGGCCACTTGTTTAGGCCAAGTGACACGACCTCTCAGATGAGGGAGTaGAATTTATCCTTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: LAVSMHMLGHLFRPSDTTSQMRE*NLSLLK
Trigger: TTTGAGCAAGGATAAATTCAACTCCCTCATCTGAGA...GGTCGTGTCACTTGGCCTAAACAAGTGGCCTAACATATGCATGCTCACAGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTAGTTCAGTTGCGACTTaGTGCCTCGCCTGTCCTGTT +
Preference number: 5 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFSSVAT*CLACPV
Trigger: AACAGGACAGGCGAGGCACAAAGTCGCAACTGAACT...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381971.8
CDS GCA 90 bp GCTTCTGATAGAAGAACATTGCTCCTTCATCTCCTGGGACTGGAATaGTCCCGTCTTCACTCTTGCAGTCAAAATCTATCCATTTACTCA +
Preference number: 5 (lower is better)
Translates to: ASDRRTLLLHLLGLE*SRLHSCSQNLSIYS
Trigger: TGAGTAAATGGATAGATTTTGACTGCAAGAGTGAAGACGGGAGCATTCCAGTCCCAGGAGATGAAGGAGCAATGTTCTTCTATCAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS GCA 90 bp AAGAGTTCAACAGCACAATTCCTCACACCCCAGAGTATGGAATCTTaGCTTCAGAACCTGAATGTCACTTGGTGTCTTAGAATGACCTTC +
Preference number: 5 (lower is better)
Translates to: KSSTAQFLTPQSMES*LQNLNVTWCLRMTF
Trigger: GAAGGTCATTCTAAGACACCAAGTGACATTCAGGTTCTGAAGGCAAGATTCCATACTCTGGGGTGTGAGGAATTGTGCTGTTGAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CCA 90 bp AATATAGTCACCTATTATTCAAACCTAGGCAGATGGAAGGTGGTCTaGGAGTGTCATCCCATCTCCTTTCCCACAATGGTTGGCAAACAT +
Preference number: 5 (lower is better)
Translates to: NIVTYYSNLGRWKVV*ECHPISFPTMVGKH
Trigger: ATGTTTGCCAACCATTGTGGGAAAGGAGATGGGATGACACTCCCAGACCACCTTCCATCTGCCTAGGTTTGAATAATAGGTGACTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463680.6
CDS CCA 90 bp TGTATAGTTTCAGTAGTTCCTTGGACTGATCTTGACTTTGATACCTaGAGGCCAGGCACAGGCAAATATGGCAGTATCATCAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: CIVSVVPWTDLDFDT*RPGTGKYGSIIRRK
Trigger: TTTCCTCCTGATGATACTGCCATATTTGCCTGTGCCTGGCCTCCAGGTATCAAAGTCAAGATCAGTCCAAGGAACTACTGAAACTATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS-3UTR CAA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAACTGGTGACCACTAGATaGTTGCAGCTGCCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: VKSEHWKSSITRFGFPRELVTTR*LQLPFP
Trigger: TGGAAAAGGCAGCTGCAACAATCTAGTGGTCACCAG...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAAGAGGCTCGAGGAACTaGAAGGTAAATCATACACTG +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQRGSRN*KVNHTL
Trigger: CAGTGTATGATTTACCTTCAAGTTCCTCGAGCCTCT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAGACCACACTATGCTTaGGACATGGATTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQRPHYA*DMDFPC
Trigger: ACAAGGGAAATCCATGTCCAAAGCATAGTGTGGTCT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GTTGACAGCCAGGAAGTAACAGGTATCCAGGAGAGTGAGGCTCTAAATTCCCTTTCTCAGATGAGGGAGTaGAATTTATCCTTGCTCAAA +
Preference number: 5 (lower is better)
Translates to: VDSQEVTGIQESEALNSLSQMRE*NLSLLK
Trigger: TTTGAGCAAGGATAAATTCAACTCCCTCATCTGAGA...AAGGGAATTTAGAGCCTCACTCTCCTGGATACCTGTTACTTCCTGGCTGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS CCA 90 bp TGTTTGCTTCTGATAGAAGAACATTGCTCCTTCATCTCCTGGGACTaGAATGCTCCCGTCTTCACTCTTGCAGTCAAAATCTATCCATTT +
Preference number: 5 (lower is better)
Translates to: CLLLIEEHCSFISWD*NAPVFTLAVKIYPF
Trigger: AAATGGATAGATTTTGACTGCAAGAGTGAAGACGGGAGCATTCCAGTCCCAGGAGATGAAGGAGCAATGTTCTTCTATCAGAAGCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CCA 90 bp CTCCAAACAGCAACATGTCTGAGTGGTTTGAGGGAACCTGGAATGTaGAGATGTATAGTTTCAGTAGTTCCTTGGACTGATCTTGACTTT +
Preference number: 5 (lower is better)
Translates to: LQTATCLSGLREPGM*RCIVSVVPWTDLDF
Trigger: AAAGTCAAGATCAGTCCAAGGAACTACTGAAACTATACATCTCCACATTCCAGGTTCCCTCAAACCACTCAGACATGTTGCTGTTTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS-3UTR CAA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGTGCGGATGATGGTATaGAAATCTATCCCGATGCCA +
Preference number: 5 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFVRMMV*KSIPMP
Trigger: TGGCATCGGGATAGATTTCAATACCATCATCCGCAC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACTGTTCCACTTCGGCTaGAATAATTGCTGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLFHFG*NNCWRK
Trigger: TTTTCTCCAGCAATTATTCAAGCCGAAGTGGAACAG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAACTCAGAGAAACTAGATaGACCAAGTGCACTGTGAAA +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQLRETR*TKCTVK
Trigger: TTTCACAGTGCACTTGGTCAATCTAGTTTCTCTGAG...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp CTTCCTCAAGCAGTCTGTGAGAGTACGAAAACAAAAGGTGGCAAGCAACATCAAACTTTACAAGCAGCCTaGGAGTTCACTTGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: LPQAVCESTKTKGGKQHQTLQAA*EFTCKG
Trigger: TCCTTTACAAGTGAACTCCAAGGCTGCTTGTAAAGT...TTGATGTTGCTTGCCACCTTTTGTTTTCGTACTCTCACAGACTGCTTGAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp AAAAGAATTGCCTCTTTCTGTAGACTTTTCGAGAACTGTCACCTCTACCTTCCCGATCGCTTATGTAATTaGAGGGCGACATGGGTAATG +
Preference number: 5 (lower is better)
Translates to: KRIASFCRLFENCHLYLPDRLCN*RATWVM
Trigger: CATTACCCATGTCGCCCTCAAATTACATAAGCGATC...GGGAAGGTAGAGGTGACAGTTCTCGAAAAGTCTACAGAAAGAGGCAATTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS TCA 90 bp GATCACCCTTGCTGGGACACTGGGAGGCCTATTCTATGGTTGTTATaGATATTGCCAAAGAATGTCTTAACCGTCCATAAAGATACATAC +
Preference number: 5 (lower is better)
Translates to: DHPCWDTGRPILWLL*ILPKNVLTVHKDTY
Trigger: GTATGTATCTTTATGGACGGTTAAGACATTCTTTGGCAATATTCATAACAACCATAGAATAGGCCTCCCAGTGTCCCAGCAAGGGTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS TCA 90 bp ACCTGTAGAATCTTCCAAGCAAACATTTGGAATGCACTGTTGGGCTaGAGCTCTTCTACCTTAGAGGAATTTCCAAGCTTGTTAGTGTGT +
Preference number: 5 (lower is better)
Translates to: TCRIFQANIWNALLG*SSSTLEEFPSLLVC
Trigger: ACACACTAACAAGCTTGGAAATTCCTCTAAGGTAGAAGAGCTTCAGCCCAACAGTGCATTCCAAATGTTTGCTTGGAAGATTCTACAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CCA 90 bp TGTAATTTTCCAAATATAGTCACCTATTATTCAAACCTAGGCAGATaGAAGGTGGTCTGGGAGTGTCATCCCATCTCCTTTCCCACAATG +
Preference number: 5 (lower is better)
Translates to: CNFPNIVTYYSNLGR*KVVWECHPISFPTM
Trigger: CATTGTGGGAAAGGAGATGGGATGACACTCCCAGACCACCTTCCATCTGCCTAGGTTTGAATAATAGGTGACTATATTTGGAAAATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463680.6
CDS-3UTR CAA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAACTCCGCAAGTGGATCTaGAGATTTTCAAGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: VKSEHWKSSITRFGFPRELRKWI*RFSSLE
Trigger: TTCAAGGCTTGAAAATCTCAAGATCCACTTGCGGAG...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTCTCCGCAAGTGGATCTaGAGATTTTCAAGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFLRKWI*RFSSLE
Trigger: TTCAAGGCTTGAAAATCTCAAGATCCACTTGCGGAG...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCACCGCAACTTTTTCCTaGCTTGTTGCTCTTTGGAAG +
Preference number: 5 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCTATFS*LVALWK
Trigger: CTTCCAAAGAGCAACAAGCAAGGAAAAAGTTGCGGT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGGGACATGGATACCATTaGGTTGAAAAGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQGHGYH*VEKKSL
Trigger: CAAACTCTTCTTTTCAACCAAATGGTATCCATGTCC...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TTGGAGTTCACTTGTAAAGGAAGCCTGGTGTGCATCTTTTGTAAAGCAGAGCAGAAACAAAACCCACACTaGGTTCTTCATTCACCTCAT +
Preference number: 5 (lower is better)
Translates to: LEFTCKGSLVCIFCKAEQKQNPH*VLHSPH
Trigger: ATGAGGTGAATGAAGAACCAAGTGTGGGTTTTGTTT...CTGCTCTGCTTTACAAAAGATGCACACCAGGCTTCCTTTACAAGTGAACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGCTAACTCATCTCTTTaGCAGACTTTGACGTCTACG +
Preference number: 5 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCANSSL*QTLTST
Trigger: CGTAGACGTCAAAGTCTGCAAAAGAGATGAGTTAGC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GTAAAATCTGAGCACTGGAAGTCAAGTATCACTAGGTTTGGTTTTCCAAGGGAAATTTTAAAGCTGGACTaGAACATTCCCTCCCGCATC +
Preference number: 5 (lower is better)
Translates to: VKSEHWKSSITRFGFPREILKLD*NIPSRI
Trigger: GATGCGGGAGGGAATGTTCAAGTCCAGCTTTAAAAT...TTCCCTTGGAAAACCAAACCTAGTGATACTTGACTTCCAGTGCTCAGATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGCTTTTTCCTTGCTTGTaGCTCTTTGGAAGAATGTGC +
Preference number: 5 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQLFPCL*LFGRMC
Trigger: GCACATTCTTCCAAAGAGCAACAAGCAAGGAAAAAG...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAGTGACCACTAGATTGTaGCAGCTGCCTTTTCCAATG +
Preference number: 5 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEVTTRL*QLPFPM
Trigger: CATTGGAAAAGGCAGCTGCAACAATCTAGTGGTCAC...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCCAACTTTTTCCTTGCTaGTTGCTCTTTGGAAGAATG +
Preference number: 5 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCQLFPC*LLFGRM
Trigger: CATTCTTCCAAAGAGCAACAAGCAAGGAAAAAGTTG...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGGTTGAAAAGAAGAGTTaGTTTCTGGCTGATAGGACT +
Preference number: 5 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQVEKKS*FLADRT
Trigger: AGTCCTATCAGCCAGAAACAAACTCTTCTTTTCAAC...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGTTGAAAAGAAGAGTTaGTTTCTGGCTGATAGGACT +
Preference number: 5 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCVEKKS*FLADRT
Trigger: AGTCCTATCAGCCAGAAACAAACTCTTCTTTTCAAC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GGACCTGTCAGTATACAAACTGTCACAGAATCCCATCTAACATCAAGCTGTTTTGGACATGGATACCATTaGGTTGAAAAGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: GPVSIQTVTESHLTSSCFGHGYH*VEKKSL
Trigger: CAAACTCTTCTTTTCAACCAAATGGTATCCATGTCC...AAAACAGCTTGATGTTAGATGGGATTCTGTGACAGTTTGTATACTGACAGGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCACTTCCTATTTAGGCTaGATATTTTCGACCAAGTGC +
Preference number: 5 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCTSYLG*IFSTKC
Trigger: GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGT...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp GAGGTGTCACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCGAACTTACTGTGTCTTaGGGACTGGCCAATTTTTAT +
Preference number: 5 (lower is better)
Translates to: EVSQKMTSYLGLIFSTKCELTVS*GLANFY
Trigger: ATAAAAATTGGCCAGTCCCAAAGACACAGTAAGTTC...GCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGTGACACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp TGTACAGTTACTATTCCCAATACTTCAAGGCAACTGGAAAGTCAAGGTTCTCAGAAACAAAACCCACACTaGGTTCTTCATTCACCTCAT +
Preference number: 5 (lower is better)
Translates to: CTVTIPNTSRQLESQGSQKQNPH*VLHSPH
Trigger: ATGAGGTGAATGAAGAACCAAGTGTGGGTTTTGTTT...CTGAGAACCTTGACTTTCCAGTTGCCTTGAAGTATTGGGAATAGTAACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACATATGTTAGGCCACTaGTTTAGGCCAAGTGACACG +
Preference number: 5 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEHMLGH*FRPSDT
Trigger: CGTGTCACTTGGCCTAAACAAGTGGCCTAACATATG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACTTGCTTGTTGCTCTTaGGAAGAATGTGCCTTCACA +
Preference number: 5 (lower is better)
Translates to: TENDFLFRLDIFDQVLCELACCS*EECAFT
Trigger: TGTGAAGGCACATTCTTCCAAAGAGCAACAAGCAAG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAAGGTACATCCTGGAATTaGACAAGCATAAGGTTTGGT +
Preference number: 5 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEGTSWN*TSIRFG
Trigger: ACCAAACCTTATGCTTGTCAAATTCCAGGATGTACC...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS-3UTR CAA 90 bp ACAGAAAATGACTTCCTATTTAGGCTTGATATTTTCGACCAAGTGCTATGTGAACAACTTTTTCCTTGCTaGTTGCTCTTTGGAAGAATG +
Preference number: 5 (lower is better)
Translates to: TENDFLFRLDIFDQVLCEQLFPC*LLFGRM
Trigger: CATTCTTCCAAAGAGCAACAAGCAAGGAAAAAGTTG...TTCACATAGCACTTGGTCGAAAATATCAAGCCTAAATAGGAAGTCATTTTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324333.14
ENST00000381971.8
CDS GCA 72 bp GGACGGAGCGCGGAAACCCGGCCCAAGTGCCGTGTGTaGGCGCGCGTCTGCGAGGGCAGCGGCGGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: GRSAETRPKCRV*ARVCEGSGGRG
Trigger: CCCCCTGCCGCCGCTGCCCTCGCAGACGCGCGCGCACACACGGCACTTGGGCCGGGTTTCCGCGCTCCGTCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000477901.5
ENST00000490709.1
ENST00000491889.6
CDS GCA 72 bp GGCTGCCGGGCACCGGGCGCGGCTGGGGAATGCAGCTaGCGCGCACGCCCAGGAAATGCCCGTAGACCTCCG +
Preference number: 6 (lower is better)
Translates to: GCRAPGAAGECS*RARPGNARRPP
Trigger: CGGAGGTCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp CTCTGGGCTGCCCGGGCGGCGCAGTGTGGACGCGGCTaGAGGGAGAGGGGAAGGGGGAAGAGGGAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: LWAARAAQCGRG*RERGRGKREGG
Trigger: TCCTCCCTCCCTCTTCCCCCTTCCCCTCTCCCTGCAGCCGCGTCCACACTGCGCCGCCCGGGCAGCCCAGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381971.8
ENST00000491889.6
CDS CCA 72 bp GGCCGGCCAGCGCGAGTGACAGCGGGCGGCCGGCGCTaGCGAGGAGTAACTTGGGGCTCCAGCCCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: GRPARVTAGGRR*RGVTWGSSPSE
Trigger: CTCTGAAGGGCTGGAGCCCCAAGTTACTCCTCGCCAGCGCCGGCCGCCCGCTGTCACTCGCGCTGGCCGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000477901.5
ENST00000490709.1
ENST00000491889.6
ENST00000682749.1
CDS CAA 90 bp GCCAGCGCGAGTGACAGCGGGCGGCCGGCGCTGGCGAGGAGTAACTaGGGGCTCCAGCCCTTCAGAGCGCTCCGCGGGCTGTGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: ASASDSGRPALARSN*GLQPFRALRGLCLL
Trigger: AAGGAGGCACAGCCCGCGGAGCGCTCTGAAGGGCTGGAGCCCCAAGTTACTCCTCGCCAGCGCCGGCCGCCCGCTGTCACTCGCGCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000477901.5
ENST00000490709.1
ENST00000491889.6
CDS TCA 72 bp CGGTGCTGCCCGGGAACTCCTCCAGGCGTTCGGTCTTaGACAGGCCGGCCGACTGGCTGTCGGGGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: RCCPGTPPGVRS*TGRPTGCRGPA
Trigger: TGCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp CCTTCTGGCTGCCGGGCACCGGGCGCGGCTGGGGAATaGAGCTGCCGCGCACGCCCAGGAAATGCCCGTAGA +
Preference number: 6 (lower is better)
Translates to: PSGCRAPGAAGE*SCRARPGNARR
Trigger: TCTACGGGCATTTCCTGGGCGTGCGCGGCAGCTGCATTCCCCAGCCGCGCCCGGTGCCCGGCAGCCAGAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp CCGGCCGACTGGCTGTCGGGGCCCGGCAGGCCATGCTaGACCACCATGTGGTTGACCAGGCCTGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PADWLSGPGRPC*TTMWLTRPGCR
Trigger: CCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCCCCGACAGCCAGTCGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp AGGCCGGCCGACTGGCTGTCGGGGCCCGGCAGGCCATaGTGCACCACCATGTGGTTGACCAGGCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: RPADWLSGPGRP*CTTMWLTRPGC
Trigger: GCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTGCCGGGCCCCGACAGCCAGTCGGCCGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS CCA 72 bp GTGACAGCGGGCGGCCGGCGCTGGCGAGGAGTAACTTaGGGCTCCAGCCCTTCAGAGCGCTCCGCGGGCTGT +
Preference number: 6 (lower is better)
Translates to: VTAGGRRWRGVT*GSSPSERSAGC
Trigger: ACAGCCCGCGGAGCGCTCTGAAGGGCTGGAGCCCCAAGTTACTCCTCGCCAGCGCCGGCCGCCCGCTGTCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000477901.5
ENST00000490709.1
ENST00000491889.6
CDS CAA 72 bp ACGGTGCTGCCCGGGAACTCCTCCAGGCGTTCGGTCTaGAACAGGCCGGCCGACTGGCTGTCGGGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: TVLPGNSSRRSV*NRPADWLSGPG
Trigger: GCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS CAA 72 bp AGTGACAGCGGGCGGCCGGCGCTGGCGAGGAGTAACTaGGGGCTCCAGCCCTTCAGAGCGCTCCGCGGGCTG +
Preference number: 6 (lower is better)
Translates to: SDSGRPALARSN*GLQPFRALRGL
Trigger: CAGCCCGCGGAGCGCTCTGAAGGGCTGGAGCCCCAAGTTACTCCTCGCCAGCGCCGGCCGCCCGCTGTCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000477901.5
ENST00000490709.1
ENST00000491889.6
CDS CCA 72 bp TCCTCCAGGCGTTCGGTCTTGAACAGGCCGGCCGACTaGCTGTCGGGGCCCGGCAGGCCATGCTGCACCACC +
Preference number: 6 (lower is better)
Translates to: SSRRSVLNRPAD*LSGPGRPCCTT
Trigger: GGTGGTGCAGCATGGCCTGCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS CAA 90 bp GGTAGGTCTACGGTGCTGCCCGGGAACTCCTCCAGGCGTTCGGTCTaGAACAGGCCGGCCGACTGGCTGTCGGGGCCCGGCAGGCCATGC +
Preference number: 6 (lower is better)
Translates to: GRSTVLPGNSSRRSV*NRPADWLSGPGRPC
Trigger: GCATGGCCTGCCGGGCCCCGACAGCCAGTCGGCCGGCCTGTTCAAGACCGAACGCCTGGAGGAGTTCCCGGGCAGCACCGTAGACCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS CAA 90 bp TGCTGGTCGTACAGGGCGCTGCAGTCGATCCAGCGGCAGCAATGCTaGCCCCCGATGCCGTCCATCTCCCCGTCGTCGTCCAGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: CWSYRALQSIQRQQC*PPMPSISPSSSRVA
Trigger: GGCCACCCTGGACGACGACGGGGAGATGGACGGCATCGGGGGCAAGCATTGCTGCCGCTGGATCGACTGCAGCGCCCTGTACGACCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp CCATGCTGCACCACCATGTGGTTGACCAGGCCTGGCTaGAGGCCGCCGTGCTCCAGCTGTTGCATGCGCTCG +
Preference number: 6 (lower is better)
Translates to: PCCTTMWLTRPG*RPPCSSCCMRS
Trigger: CGAGCGCATGCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp TGCAGTCGATCCAGCGGCAGCAATGCTTGCCCCCGATaGCGTCCATCTCCCCGTCGTCGTCCAGGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: CSRSSGSNACPR*RPSPRRRPGWP
Trigger: AGGCCACCCTGGACGACGACGGGGAGATGGACGGCATCGGGGGCAAGCATTGCTGCCGCTGGATCGACTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp ACAGGGCGCTGCAGTCGATCCAGCGGCAGCAATGCTTaGCCCCGATGCCGTCCATCTCCCCGTCGTCGTCCA +
Preference number: 6 (lower is better)
Translates to: TGRCSRSSGSNA*PRCRPSPRRRP
Trigger: TGGACGACGACGGGGAGATGGACGGCATCGGGGGCAAGCATTGCTGCCGCTGGATCGACTGCAGCGCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp TCGTACAGGGCGCTGCAGTCGATCCAGCGGCAGCAATaGTTGCCCCCGATGCCGTCCATCTCCCCGTCGTCG +
Preference number: 6 (lower is better)
Translates to: SYRALQSIQRQQ*LPPMPSISPSS
Trigger: CGACGACGGGGAGATGGACGGCATCGGGGGCAAGCATTGCTGCCGCTGGATCGACTGCAGCGCCCTGTACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000467497.6
ENST00000491889.6
ENST00000682749.1
CDS CCA 72 bp CAGGCCATGCTGCACCACCATGTGGTTGACCAGGCCTaGCTGCAGGCCGCCGTGCTCCAGCTGTTGCATGCG +
Preference number: 6 (lower is better)
Translates to: QAMLHHHVVDQA*LQAAVLQLLHA
Trigger: CGCATGCAACAGCTGGAGCACGGCGGCCTGCAGCCAGGCCTGGTCAACCACATGGTGGTGCAGCATGGCCTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS CAA 72 bp TACAGGGCGCTGCAGTCGATCCAGCGGCAGCAATGCTaGCCCCCGATGCCGTCCATCTCCCCGTCGTCGTCC +
Preference number: 6 (lower is better)
Translates to: YRALQSIQRQQC*PPMPSISPSSS
Trigger: GGACGACGACGGGGAGATGGACGGCATCGGGGGCAAGCATTGCTGCCGCTGGATCGACTGCAGCGCCCTGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000467497.6
ENST00000491889.6
ENST00000682749.1
CDS CCA 72 bp CATCGGACAGCGGGGACAAGGACAGCGCTCTCTTCTTaGAGCGGGCCGAGTGGGACCTGGTGGATGAGTGCC +
Preference number: 6 (lower is better)
Translates to: HRTAGTRTALSS*SGPSGTWWMSA
Trigger: GGCACTCATCCACCAGGTCCCACTCGGCCCGCTCCAAGAAGAGAGCGCTGTCCTTGTCCCCGCTGTCCGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000490709.1
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp CCCCATTGTGCCTCTCCAATCTGCCCGAGCCACACCTaGTGCCGGCCTTCTTCCTGCTCTCCACCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: PHCASPICPSHT*CRPSSCSPPGP
Trigger: TGGACCAGGTGGAGAGCAGGAAGAAGGCCGGCAGCAGGTGTGGCTCGGGCAGATTGGAGAGGCACAATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS CAA 90 bp ATCCCGATGCCATCGGACAGCGGGGACAAGGACAGCGCTCTCTTCTaGGAGCGGGCCGAGTGGGACCTGGTGGATGAGTGCCGAGGACTA +
Preference number: 6 (lower is better)
Translates to: IPMPSDSGDKDSALF*ERAEWDLVDECRGL
Trigger: TAGTCCTCGGCACTCATCCACCAGGTCCCACTCGGCCCGCTCCAAGAAGAGAGCGCTGTCCTTGTCCCCGCTGTCCGATGGCATCGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000490709.1
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp CCTTCAGCAGCAGCATCTCTAGGGGAAGTGGCCGGCTaGAGGGACTGCACGGTGAGGCAATCTGTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: PSAAASLGEVAG*RDCTVRQSVSR
Trigger: CCTGCTCACAGATTGCCTCACCGTGCAGTCCCTGCAGCCGGCCACTTCCCCTAGAGATGCTGCTGCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000463680.6
ENST00000464391.2
ENST00000467497.6
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682864.1
CDS CCA 72 bp GATCCCCTAGATCAAGGCCATTCTGAGAGCCGTGGTTaGAGAGCGAAGGGAGGGCCCTGTAGCCCTGGGACC +
Preference number: 6 (lower is better)
Translates to: DPLDQGHSESRG*RAKGGPCSPGT
Trigger: GGTCCCAGGGCTACAGGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGAATGGCCTTGATCTAGGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000490709.1
ENST00000491889.6
ENST00000682749.1
CDS GCA 72 bp CATTGTGCCTCTCCAATCTGCCCGAGCCACACCTGCTaGCGGCCTTCTTCCTGCTCTCCACCTGGTCCAAGA +
Preference number: 6 (lower is better)
Translates to: HCASPICPSHTC*RPSSCSPPGPR
Trigger: TCTTGGACCAGGTGGAGAGCAGGAAGAAGGCCGGCAGCAGGTGTGGCTCGGGCAGATTGGAGAGGCACAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS GCA 72 bp TGTCTAGCAAACGTGCCCCATTGTGCCTCTCCAATCTaGCCGAGCCACACCTGCTGCCGGCCTTCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: CLANVPHCASPI*PSHTCCRPSSC
Trigger: GCAGGAAGAAGGCCGGCAGCAGGTGTGGCTCGGGCAGATTGGAGAGGCACAATGGGGCACGTTTGCTAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS CAA 72 bp CCTCCAGCCTGGGTGACCTGGAATCGCGGCTTCCCATaGGTGAGCATTTGTCTCCTGGGGCTTAAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: PPAWVTWNRGFP*VSICLLGLKAG
Trigger: GCCTGCCTTAAGCCCCAGGAGACAAATGCTCACCAATGGGAAGCCGCGATTCCAGGTCACCCAGGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS TCA 72 bp GGAAGGCTAAGGAGATCCCCTAGATCAAGGCCATTCTaGGAGCCGTGGTTGGAGAGCGAAGGGAGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: GRLRRSPRSRPF*EPWLESEGRAL
Trigger: CAGGGCCCTCCCTTCGCTCTCCAACCACGGCTCTCAGAATGGCCTTGATCTAGGGGATCTCCTTAGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000490709.1
ENST00000491889.6
ENST00000682749.1
CDS TCA 72 bp TCTCTTCTTGGAGCGGGCCGAGTGGGACCTGGTGGATaGGTGCCGAGGACTAGGGTAAGGAGAGTGGCTACT +
Preference number: 6 (lower is better)
Translates to: SLLGAGRVGPGG*VPRTRVRRVAT
Trigger: AGTAGCCACTCTCCTTACCCTAGTCCTCGGCACTCATCCACCAGGTCCCACTCGGCCCGCTCCAAGAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000490709.1
ENST00000491889.6
ENST00000682749.1
CDS TCA 72 bp GCAGGCAGATGGATGCGGCTCTCAGCCACGTTGTTCTaGGGAGCCATCCCTCCTCCTGAGGGCATCTTGAGA +
Preference number: 6 (lower is better)
Translates to: AGRWMRLSATLF*GAIPPPEGILR
Trigger: TCTCAAGATGCCCTCAGGAGGAGGGATGGCTCCTCAGAACAACGTGGCTGAGAGCCGCATCCATCTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS CAA 72 bp GCCACCAAGGACGTGGGCGACGTGCGGATGATGGTATaGAAATCTATCCCGATGCCATCGGACAGCGGGGAC +
Preference number: 6 (lower is better)
Translates to: ATKDVGDVRMMV*KSIPMPSDSGD
Trigger: GTCCCCGCTGTCCGATGGCATCGGGATAGATTTCAATACCATCATCCGCACGTCGCCCACGTCCTTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000491889.6
ENST00000682749.1
CDS TCA 72 bp CCCTGGGACCACTCCTGCTTCATGCTTGAGGCCGACTaGCTTTCCGTCAGACTCAAGGTCGTGGACGCCAAA +
Preference number: 6 (lower is better)
Translates to: PWDHSCFMLEAD*LSVRLKVVDAK
Trigger: TTTGGCGTCCACGACCTTGAGTCTGACGGAAAGTCAGTCGGCCTCAAGCATGAAGCAGGAGTGGTCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000462164.5
ENST00000473846.5
ENST00000477901.5
ENST00000478315.5
ENST00000478844.5
ENST00000481827.5
ENST00000490709.1
ENST00000491889.6
ENST00000682749.1
CDS TCA 72 bp GGCAGTCCTCAAACGAAGGCACCACACTGCAGGAGCTaGCAGGCGGCACAATTCTCTGGGAATCGGGGTAGT +
Preference number: 6 (lower is better)
Translates to: GSPQTKAPHCRS*QAAQFSGNRGS
Trigger: ACTACCCCGATTCCCAGAGAATTGTGCCGCCTGTCAGCTCCTGCAGTGTGGTGCCTTCGTTTGAGGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682846.1
ENST00000682864.1
ENST00000683926.1
CDS TCA 72 bp GTAGTTGTGGTTGGCTCTGCCTTTGCTGTCTTTACCTaGATAGAGGTCAGGCCCGGGTCCAGGGGAGCGTCC +
Preference number: 6 (lower is better)
Translates to: VVVVGSAFAVFT*IEVRPGSRGAS
Trigger: GGACGCTCCCCTGGACCCGGGCCTGACCTCTATTCAGGTAAAGACAGCAAAGGCAGAGCCAACCACAACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463680.6
CDS CCA 72 bp AGGAATGTGATGACCACTGACCATCCTAGGCCCCTGTaGGGTTCCCGATGTCCGGTGGAGACTCATGCTGCA +
Preference number: 6 (lower is better)
Translates to: RNVMTTDHPRPL*GSRCPVETHAA
Trigger: TGCAGCATGAGTCTCCACCGGACATCGGGAACCCCACAGGGGCCTAGGATGGTCAGTGGTCATCACATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS CAA 90 bp AGCTCTTTGTGCCTGTCTCTCTATTTGTCTAGCAAACGTGCCCCATaGTGCCTCTCCAATCTGCCCGAGCCACACCTGCTGCCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSLCLSLYLSSKRAP*CLSNLPEPHLLPAF
Trigger: GAAGGCCGGCAGCAGGTGTGGCTCGGGCAGATTGGAGAGGCACAATGGGGCACGTTTGCTAGACAAATAGAGAGACAGGCACAAAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS GCA 72 bp CTGTCTCTCTATTTGTCTAGCAAACGTGCCCCATTGTaGCTCTCCAATCTGCCCGAGCCACACCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: LSLYLSSKRAPL*LSNLPEPHLLP
Trigger: CGGCAGCAGGTGTGGCTCGGGCAGATTGGAGAGGCACAATGGGGCACGTTTGCTAGACAAATAGAGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS CCA 72 bp CAGGGACTGCACGGTGAGGCAATCTGTGAGCAGGTCTaGATGGAGCTCTGTGCTGGACCGCAACTTTTTCCT +
Preference number: 6 (lower is better)
Translates to: QGLHGEAICEQV*MELCAGPQLFP
Trigger: AGGAAAAAGTTGCGGTCCAGCACAGAGCTCCATCCAGACCTGCTCACAGATTGCCTCACCGTGCAGTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000463680.6
ENST00000464391.2
ENST00000467497.6
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682864.1
CDS CCA 72 bp TACATTATGTCCTGGAGAAGGGTGACTGACAGGATGTaGGGGTGGTACGGCCCCAGCAGCTGTTCCACTTCG +
Preference number: 6 (lower is better)
Translates to: YIMSWRRVTDRM*GWYGPSSCSTS
Trigger: CGAAGTGGAACAGCTGCTGGGGCCGTACCACCCCCACATCCTGTCAGTCACCCTTCTCCAGGACATAATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000464391.2
ENST00000467497.6
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682864.1
CDS CCA 72 bp GTATGTGACCCTGACATGCCTCCAGCCTGGGTGACCTaGAATCGCGGCTTCCCATTGGTGAGCATTTGTCTC +
Preference number: 6 (lower is better)
Translates to: VCDPDMPPAWVT*NRGFPLVSICL
Trigger: GAGACAAATGCTCACCAATGGGAAGCCGCGATTCCAGGTCACCCAGGCTGGAGGCATGTCAGGGTCACATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS CCA 72 bp GGCTTTAAAGTATGTGACCCTGACATGCCTCCAGCCTaGGTGACCTGGAATCGCGGCTTCCCATTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: GFKVCDPDMPPA*VTWNRGFPLVS
Trigger: GCTCACCAATGGGAAGCCGCGATTCCAGGTCACCCAGGCTGGAGGCATGTCAGGGTCACATACTTTAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS CCA 72 bp GCAGGCTATACAAGAAGCCTGGTGCTGTCATCTGCTTaGCTTCAGGTGAGGGCCTCAGGCCACTTCCACTCA +
Preference number: 6 (lower is better)
Translates to: AGYTRSLVLSSA*LQVRASGHFHS
Trigger: TGAGTGGAAGTGGCCTGAGGCCCTCACCTGAAGCCAAGCAGATGACAGCACCAGGCTTCTTGTATAGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS TCA 72 bp CTCAGCCACGTTGTTCTGAGGAGCCATCCCTCCTCCTaGGGGCATCTTGAGATGGAGGTTGTTAGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: LSHVVLRSHPSS*GHLEMEVVSKA
Trigger: AGCCTTGCTAACAACCTCCATCTCAAGATGCCCTCAGGAGGAGGGATGGCTCCTCAGAACAACGTGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS TCA 72 bp CAAATCAGCCAGGGCCAAGATTTCCAGACACTTGAGTaGCTTCCCGGTCCCCGAGGTGACTTGTCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: QISQGQDFQTLE*LPGPRGDLSAP
Trigger: TGGAGCTGACAAGTCACCTCGGGGACCGGGAAGTCACTCAAGTGTCTGGAAATCTTGGCCCTGGCTGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478844.5
ENST00000481827.5
CDS TCA 72 bp CCTAGACTCTCTGAAGAGTCCTGGACATTCAAGGCCTaGCCTTCAGGGGAGGTTCCTACCCTAGACTCTCCC +
Preference number: 6 (lower is better)
Translates to: PRLSEESWTFKA*PSGEVPTLDSP
Trigger: GGGAGAGTCTAGGGTAGGAACCTCCCCTGAAGGTCAGGCCTTGAATGTCCAGGACTCTTCAGAGAGTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CCA 72 bp ACCATCCTAGGCCCCTGTGGGGTTCCCGATGTCCGGTaGAGACTCATGCTGCATGATCTTCCATTCATTCTG +
Preference number: 6 (lower is better)
Translates to: TILGPCGVPDVR*RLMLHDLPFIL
Trigger: CAGAATGAATGGAAGATCATGCAGCATGAGTCTCCACCGGACATCGGGAACCCCACAGGGGCCTAGGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS CCA 72 bp TGGCATAAGGACAGTTCCAGTCGGTCTTCTTGTCCATaGCCTGGAGAATTCAGCCCCCAGGGAAACAGGGCA +
Preference number: 6 (lower is better)
Translates to: WHKDSSSRSSCP*PGEFSPQGNRA
Trigger: TGCCCTGTTTCCCTGGGGGCTGAATTCTCCAGGCCATGGACAAGAAGACCGACTGGAACTGTCCTTATGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465708.5
ENST00000471664.1
CDS CAA 72 bp AGCCTGGGATGGCTCCTACAGTCAAACTCAAAGCCCTaGTCTAGGTCTCACACTTGGCAGCTGGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SLGWLLQSNSKP*SRSHTWQLERL
Trigger: CAGCCTCTCCAGCTGCCAAGTGTGAGACCTAGACAAGGGCTTTGAGTTTGACTGTAGGAGCCATCCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS CAA 90 bp AAACGGTTCTGCAGGCTATACAAGAAGCCTGGTGCTGTCATCTGCTaGGCTTCAGGTGAGGGCCTCAGGCCACTTCCACTCATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: KRFCRLYKKPGAVIC*ASGEGLRPLPLMAE
Trigger: TTCTGCCATGAGTGGAAGTGGCCTGAGGCCCTCACCTGAAGCCAAGCAGATGACAGCACCAGGCTTCTTGTATAGCCTGCAGAACCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS TCA 72 bp ACCTGGCTTGCTGGAGGTGAAATGAGTCCCAGTCGCTaGACCATCATGGGACTGCTGGTGACCACTAGATTG +
Preference number: 6 (lower is better)
Translates to: TWLAGGEMSPSR*TIMGLLVTTRL
Trigger: CAATCTAGTGGTCACCAGCAGTCCCATGATGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000462164.5
ENST00000477901.5
ENST00000478315.5
ENST00000478844.5
ENST00000481827.5
ENST00000645097.1
ENST00000682749.1
ENST00000682846.1
ENST00000683998.1
CDS TCA 72 bp CTGGTTGCATGCTGTAGAGACCTGGCTTGCTGGAGGTaGAATGAGTCCCAGTCGCTGAACCATCATGGGACT +
Preference number: 6 (lower is better)
Translates to: LVACCRDLACWR*NESQSLNHHGT
Trigger: AGTCCCATGATGGTTCAGCGACTGGGACTCATTTCACCTCCAGCAAGCCAGGTCTCTACAGCATGCAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000462164.5
ENST00000477901.5
ENST00000478315.5
ENST00000478844.5
ENST00000481827.5
ENST00000645097.1
ENST00000682749.1
ENST00000682846.1
ENST00000683998.1
CDS TCA 72 bp CTGCTGGGTATAGGGAGGCTGTGTTCTTTGCAGTATTaGAGAAGGAGCTGGAACTCTCCGGGGGCTGATGTG +
Preference number: 6 (lower is better)
Translates to: LLGIGRLCSLQY*RRSWNSPGADV
Trigger: CACATCAGCCCCCGGAGAGTTCCAGCTCCTTCTTCAATACTGCAAAGAACACAGCCTCCCTATACCCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000464391.2
ENST00000467497.6
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682864.1
CDS TCA 72 bp AGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCAGGTAACCGGGAT +
Preference number: 6 (lower is better)
Translates to: RLLQLPFPMDLH*GPKPRAPGNRD
Trigger: ATCCCGGTTACCTGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682749.1
CDS CCA 72 bp CCCCAGCAGCTGTTCCACTTCGGCTTGAATAATTGCTaGAGAAAATGGGAGCTGAATAGAGGTCAGGCCCGG +
Preference number: 6 (lower is better)
Translates to: PQQLFHFGLNNC*RKWELNRGQAR
Trigger: CCGGGCCTGACCTCTATTCAGCTCCCATTTTCTCCAGCAATTATTCAAGCCGAAGTGGAACAGCTGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000464391.2
ENST00000467497.6
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682864.1
CDS CAA 72 bp GATGACAAATCAGCCAGGGCCAAGATTTCCAGACACTaGAGTGACTTCCCGGTCCCCGAGGTGACTTGTCAG +
Preference number: 6 (lower is better)
Translates to: DDKSARAKISRH*SDFPVPEVTCQ
Trigger: CTGACAAGTCACCTCGGGGACCGGGAAGTCACTCAAGTGTCTGGAAATCTTGGCCCTGGCTGATTTGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478844.5
ENST00000481827.5
CDS TCA 72 bp AGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCTCTGAGGCAGTTA +
Preference number: 6 (lower is better)
Translates to: RLLQLPFPMDLH*GPKPRAPLRQL
Trigger: TAACTGCCTCAGAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645097.1
CDS GCA 72 bp CATTTACTCAAGGCTCACTCAGGTGGAACCTCCTGCTaGCTGCCCACATCCCTCTGTCACAATGAATCCTTC +
Preference number: 6 (lower is better)
Translates to: HLLKAHSGGTSC*LPTSLCHNESF
Trigger: GAAGGATTCATTGTGACAGAGGGATGTGGGCAGGCAGCAGGAGGTTCCACCTGAGTGAGCCTTGAGTAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CCA 72 bp GCTGCATTCATTGCCCTCTGTAAGCTAGGACTGATCTaGTTGCATGCTGTAGAGACCTGGCTTGCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: AAFIALCKLGLI*LHAVETWLAGG
Trigger: ACCTCCAGCAAGCCAGGTCTCTACAGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000462164.5
ENST00000477901.5
ENST00000478315.5
ENST00000478844.5
ENST00000481827.5
ENST00000645097.1
ENST00000682749.1
ENST00000682846.1
ENST00000683998.1
CDS CCA 72 bp GTCGAGAAGGCTCTGTGGAAAACATCAAAACTGGCCTaGCCCATGGATGTAGGGACTAGGCAGTCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: VEKALWKTSKLA*PMDVGTRQSSN
Trigger: GTTTGAGGACTGCCTAGTCCCTACATCCATGGGCCAGGCCAGTTTTGATGTTTTCCACAGAGCCTTCTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000461870.5
ENST00000491889.6
ENST00000645252.2
ENST00000682749.1
ENST00000682846.1
ENST00000682864.1
ENST00000683926.1
CDS CCA 72 bp CCTCAGGAGCCCTTTAACCTCAACCTGAGCACTTCTTaGGGGAAGAGTTCAACAGCACAATTCCTCACACCC +
Preference number: 6 (lower is better)
Translates to: PQEPFNLNLSTS*GKSSTAQFLTP
Trigger: GGGTGTGAGGAATTGTGCTGTTGAACTCTTCCCCCAAGAAGTGCTCAGGTTGAGGTTAAAGGGCTCCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CCA 72 bp GCAACCTTCAAACCTTCAGGGATCCTTTGGTCGTGTTaGCTGTCCTCGGGGATTCACAGAAAGCGGTATCAC +
Preference number: 6 (lower is better)
Translates to: ATFKPSGILWSC*LSSGIHRKRYH
Trigger: GTGATACCGCTTTCTGTGAATCCCCGAGGACAGCCAACACGACCAAAGGATCCCTGAAGGTTTGAAGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CCA 72 bp TGGCTTCAGGTGAGGGCCTCAGGCCACTTCCACTCATaGCAGAAGGTAAAGAGAAGCAGGCCTGAAAGAAAT +
Preference number: 6 (lower is better)
Translates to: WLQVRASGHFHS*QKVKRSRPERN
Trigger: ATTTCTTTCAGGCCTGCTTCTCTTTACCTTCTGCCATGAGTGGAAGTGGCCTGAGGCCCTCACCTGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS CAA 72 bp CGCAACCTTCAAACCTTCAGGGATCCTTTGGTCGTGTaGGCTGTCCTCGGGGATTCACAGAAAGCGGTATCA +
Preference number: 6 (lower is better)
Translates to: RNLQTFRDPLVV*AVLGDSQKAVS
Trigger: TGATACCGCTTTCTGTGAATCCCCGAGGACAGCCAACACGACCAAAGGATCCCTGAAGGTTTGAAGGTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CAA 72 bp AGGCCTTCTCGCAACCTTCAAACCTTCAGGGATCCTTaGGTCGTGTTGGCTGTCCTCGGGGATTCACAGAAA +
Preference number: 6 (lower is better)
Translates to: RPSRNLQTFRDP*VVLAVLGDSQK
Trigger: TTTCTGTGAATCCCCGAGGACAGCCAACACGACCAAAGGATCCCTGAAGGTTTGAAGGTTGCGAGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CAA 90 bp AGGTTGGCTGCATTCATTGCCCTCTGTAAGCTAGGACTGATCTGGTaGCATGCTGTAGAGACCTGGCTTGCTGGAGGTGAAATGAGTCCC +
Preference number: 6 (lower is better)
Translates to: RLAAFIALCKLGLIW*HAVETWLAGGEMSP
Trigger: GGGACTCATTTCACCTCCAGCAAGCCAGGTCTCTACAGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000462164.5
ENST00000477901.5
ENST00000478315.5
ENST00000478844.5
ENST00000481827.5
ENST00000645097.1
ENST00000682749.1
ENST00000682846.1
ENST00000683998.1
CDS CAA 90 bp GGCTTCCATATGCAGTGTCTGCTTGTGTACCTGTGTGGGTATAGATaGTTTATATCTTGCCCTTGGCTGGGGGCCTCAGACAGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: GFHMQCLLVYLCGYR*FISCPWLGASDSCA
Trigger: TGCACAGCTGTCTGAGGCCCCCAGCCAAGGGCAAGATATAAACAATCTATACCCACACAGGTACACAAGCAGACACTGCATATGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS TCA 72 bp AGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCTTTCCCAGGATTT +
Preference number: 6 (lower is better)
Translates to: RLLQLPFPMDLH*GPKPRAPFPGF
Trigger: AAATCCTGGGAAAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381971.8
ENST00000477901.5
ENST00000481827.5
CDS TCA 72 bp TGCCTTTCTGCCCTCAGGAGCCCTTTAACCTCAACCTaGGCACTTCTTGGGGGAAGAGTTCAACAGCACAAT +
Preference number: 6 (lower is better)
Translates to: CLSALRSPLTST*ALLGGRVQQHN
Trigger: ATTGTGCTGTTGAACTCTTCCCCCAAGAAGTGCTCAGGTTGAGGTTAAAGGGCTCCTGAGGGCAGAAAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS TCA 72 bp CCTTGTCTAGGTCTCACACTTGGCAGCTGGAGAGGCTaGATTGAGACAATTTTAGAACCCAGACCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: PCLGLTLGSWRG*IETILEPRPQS
Trigger: GCTCTGGGGTCTGGGTTCTAAAATTGTCTCAATTCAGCCTCTCCAGCTGCCAAGTGTGAGACCTAGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS TCA 72 bp AGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCTCTATTAGTTGCC +
Preference number: 6 (lower is better)
Translates to: RLLQLPFPMDLH*GPKPRAPLLVA
Trigger: GGCAACTAATAGAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682846.1
ENST00000683998.1
CDS CAA 72 bp GCATTCATTGCCCTCTGTAAGCTAGGACTGATCTGGTaGCATGCTGTAGAGACCTGGCTTGCTGGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: AFIALCKLGLIW*HAVETWLAGGE
Trigger: TTCACCTCCAGCAAGCCAGGTCTCTACAGCATGCAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000462164.5
ENST00000477901.5
ENST00000478315.5
ENST00000478844.5
ENST00000481827.5
ENST00000645097.1
ENST00000682749.1
ENST00000682846.1
ENST00000683998.1
CDS CAA 90 bp AGGCCTTCTCGCAACCTTCAAACCTTCAGGGATCCTTTGGTCGTGTaGGCTGTCCTCGGGGATTCACAGAAAGCGGTATCACAATTTTTC +
Preference number: 6 (lower is better)
Translates to: RPSRNLQTFRDPLVV*AVLGDSQKAVSQFF
Trigger: GAAAAATTGTGATACCGCTTTCTGTGAATCCCCGAGGACAGCCAACACGACCAAAGGATCCCTGAAGGTTTGAAGGTTGCGAGAAGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS TCA 72 bp AGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCTAGACAACAAACA +
Preference number: 6 (lower is better)
Translates to: RLLQLPFPMDLH*GPKPRAPRQQT
Trigger: TGTTTGTTGTCTAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324333.14
CDS TCA 72 bp AGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCATTATTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: RLLQLPFPMDLH*GPKPRAPLFFL
Trigger: CAGGAAGAATAATGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS GCA 72 bp GGGTGGCTGGACCCTCGGCATCAGCTCATTCTCCCCTaGTACACACATACACACACAAATAATGTTTCTAAA +
Preference number: 6 (lower is better)
Translates to: GWLDPRHQLILP*YTHTHTNNVSK
Trigger: TTTAGAAACATTATTTGTGTGTGTATGTGTGTAGCAGGGGAGAATGAGCTGATGCCGAGGGTCCAGCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000477901.5
ENST00000490709.1
ENST00000491889.6
CDS GCA 72 bp AGAAGTAAGAAGTCCTTGCACTGCGGGGCTTCCATATaGAGTGTCTGCTTGTGTACCTGTGTGGGTATAGAT +
Preference number: 6 (lower is better)
Translates to: RSKKSLHCGASI*SVCLCTCVGID
Trigger: ATCTATACCCACACAGGTACACAAGCAGACACTGCATATGGAAGCCCCGCAGTGCAAGGACTTCTTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS CCA 72 bp AGAAAGACAGGCGATATAAAATCAGAGTTTAGAGCCTaGAGAGATGACATCAGCTGGGGGATCAGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RKTGDIKSEFRA*RDDISWGIRKG
Trigger: GCCCTTCCTGATCCCCCAGCTGATGTCATCTCTCCAGGCTCTAAACTCTGATTTTATATCGCCTGTCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464391.2
ENST00000467497.6
CDS CCA 72 bp CTGAAACGCAAGCATGGCATTGAGCACAAGTTCCTTTaGGCACAAGTTCCACAGATCATTCCAACCCAGCTA +
Preference number: 6 (lower is better)
Translates to: LKRKHGIEHKFL*AQVPQIIPTQL
Trigger: TAGCTGGGTTGGAATGATCTGTGGAACTTGTGCCCAAAGGAACTTGTGCTCAATGCCATGCTTGCGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CAA 72 bp CACCCAGCTCAGGAATCAGAAGGGGTGGAGAGCAATTaGCAGCCCATTGATAAAGAACAACACAGACGATCT +
Preference number: 6 (lower is better)
Translates to: HPAQESEGVESN*QPIDKEQHRRS
Trigger: AGATCGTCTGTGTTGTTCTTTATCAATGGGCTGCAAATTGCTCTCCACCCCTTCTGATTCCTGAGCTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463680.6
CDS CAA 72 bp GCAGACTGCCACATTTACAAGTCTTCAAGAAATTGTTaGGGGAGCCACATGACACCGGGATCACAGGAACTC +
Preference number: 6 (lower is better)
Translates to: ADCHIYKSSRNC*GSHMTPGSQEL
Trigger: GAGTTCCTGTGATCCCGGTGTCATGTGGCTCCCCAAACAATTTCTTGAAGACTTGTAAATGTGGCAGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CAA 90 bp TCACGCGAAATAAGGGACCTGGTATCTGAAGGAGGTATATTCAGGTaGGCTGCATTCATTGCCCTCTGTAAGCTAGGACTGATCTGGTTG +
Preference number: 6 (lower is better)
Translates to: SREIRDLVSEGGIFR*AAFIALCKLGLIWL
Trigger: CAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAATATACCTCCTTCAGATACCAGGTCCCTTATTTCGCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000324333.14
ENST00000381971.8
ENST00000462164.5
ENST00000477901.5
ENST00000478315.5
ENST00000478844.5
ENST00000481827.5
ENST00000682749.1
CDS CAA 90 bp AGCAGGAGGGTGCCTGACTTCACCACACTGCTATGTGTACTATTATaGCTAAGCGAGCCAGGACACGGAGTTTCTGAATATGTTTGCTTC +
Preference number: 6 (lower is better)
Translates to: SRRVPDFTTLLCVLL*LSEPGHGVSEYVCF
Trigger: GAAGCAAACATATTCAGAAACTCCGTGTCCTGGCTCGCTTAGCAATAATAGTACACATAGCAGTGTGGTGAAGTCAGGCACCCTCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CAA 90 bp AGTAAGAAGTCCTTGCACTGCGGGGCTTCCATATGCAGTGTCTGCTaGTGTACCTGTGTGGGTATAGATTGTTTATATCTTGCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: SKKSLHCGASICSVC*CTCVGIDCLYLALG
Trigger: GCCAAGGGCAAGATATAAACAATCTATACCCACACAGGTACACAAGCAGACACTGCATATGGAAGCCCCGCAGTGCAAGGACTTCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS CAA 90 bp GCAGCTGCCCATAAAATCCTGGTATCTGAAGGAGGTATATTCAGGTaGGCTGCATTCATTGCCCTCTGTAAGCTAGGACTGATCTGGTTG +
Preference number: 6 (lower is better)
Translates to: AAAHKILVSEGGIFR*AAFIALCKLGLIWL
Trigger: CAACCAGATCAGTCCTAGCTTACAGAGGGCAATGAATGCAGCCAACCTGAATATACCTCCTTCAGATACCAGGATTTTATGGGCAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682846.1
CDS CAA 90 bp TGCTGCTGCTTTTGCAGACTGCCACATTTACAAGTCTTCAAGAAATaGTTTGGGGAGCCACATGACACCGGGATCACAGGAACTCTCTTT +
Preference number: 6 (lower is better)
Translates to: CCCFCRLPHLQVFKK*FGEPHDTGITGTLF
Trigger: AAAGAGAGTTCCTGTGATCCCGGTGTCATGTGGCTCCCCAAACAATTTCTTGAAGACTTGTAAATGTGGCAGTCTGCAAAAGCAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS TCA 72 bp AGATTGTTGCAGCTGCCTTTTCCAATGGACTTGCACTaGGGCCCAAAGCCAAGAGCCCCTGTATTATATTTC +
Preference number: 6 (lower is better)
Translates to: RLLQLPFPMDLH*GPKPRAPVLYF
Trigger: GAAATATAATACAGGGGCTCTTGGCTTTGGGCCTCAGTGCAAGTCCATTGGAAAAGGCAGCTGCAACAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462164.5
CDS GCA 72 bp ACCCAGCTCAGGAATCAGAAGGGGTGGAGAGCAATTTaGAGCCCATTGATAAAGAACAACACAGACGATCTT +
Preference number: 6 (lower is better)
Translates to: TQLRNQKGWRAI*SPLIKNNTDDL
Trigger: AAGATCGTCTGTGTTGTTCTTTATCAATGGGCTGCAAATTGCTCTCCACCCCTTCTGATTCCTGAGCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463680.6
CDS CCA 72 bp ACCTATTATTCAAACCTAGGCAGATGGAAGGTGGTCTaGGAGTGTCATCCCATCTCCTTTCCCACAATGGTT +
Preference number: 6 (lower is better)
Translates to: TYYSNLGRWKVV*ECHPISFPTMV
Trigger: AACCATTGTGGGAAAGGAGATGGGATGACACTCCCAGACCACCTTCCATCTGCCTAGGTTTGAATAATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463680.6
CDS CCA 72 bp CTGATAGAAGAACATTGCTCCTTCATCTCCTGGGACTaGAATGCTCCCGTCTTCACTCTTGCAGTCAAAATC +
Preference number: 6 (lower is better)
Translates to: LIEEHCSFISWD*NAPVFTLAVKI
Trigger: GATTTTGACTGCAAGAGTGAAGACGGGAGCATTCCAGTCCCAGGAGATGAAGGAGCAATGTTCTTCTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CCA 72 bp TCAGTAGTTCCTTGGACTGATCTTGACTTTGATACCTaGAGGCCAGGCACAGGCAAATATGGCAGTATCATC +
Preference number: 6 (lower is better)
Translates to: SVVPWTDLDFDT*RPGTGKYGSII
Trigger: GATGATACTGCCATATTTGCCTGTGCCTGGCCTCCAGGTATCAAAGTCAAGATCAGTCCAAGGAACTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CAA 72 bp GGTAGTCACTTAAGCTCTTTGTGCCTGTCTCTCTATTaGTCTAGCAAACGTGCCCCATTGTGCCTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: GSHLSSLCLSLY*SSKRAPLCLSN
Trigger: ATTGGAGAGGCACAATGGGGCACGTTTGCTAGACAAATAGAGAGACAGGCACAAAGAGCTTAAGTGACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS CAA 90 bp CTCAGACAGCTGTGCAGAGTACTTGGCATACATTTCCAGGGCTACTaGCTCTTTGGTTTTATAAAATGCAGGCAGCAGGAACATTCAGGA +
Preference number: 6 (lower is better)
Translates to: LRQLCRVLGIHFQGY*LFGFIKCRQQEHSG
Trigger: TCCTGAATGTTCCTGCTGCCTGCATTTTATAAAACCAAAGAGCAAGTAGCCCTGGAAATGTATGCCAAGTACTCTGCACAGCTGTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS CAA 90 bp CATTTACCCTATTGGGGGCTCCAAACAGCAACATGTCTGAGTGGTTaGAGGGAACCTGGAATGTGGAGATGTATAGTTTCAGTAGTTCCT +
Preference number: 6 (lower is better)
Translates to: HLPYWGLQTATCLSG*REPGMWRCIVSVVP
Trigger: AGGAACTACTGAAACTATACATCTCCACATTCCAGGTTCCCTCAAACCACTCAGACATGTTGCTGTTTGGAGCCCCCAATAGGGTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS TCA 72 bp CAAAGCCAAGAGCCCCTAATTGAATCATCCATAGGATaGCAAATCAGCCAGGGCCAAGATTTCCAGACACTT +
Preference number: 6 (lower is better)
Translates to: QSQEPLIESSIG*QISQGQDFQTL
Trigger: AAGTGTCTGGAAATCTTGGCCCTGGCTGATTTGTCATCCTATGGATGATTCAATTAGGGGCTCTTGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478844.5
CDS TCA 72 bp GGTGGAATCTTCAACAGTTTTGGCCTTTTGAAGACCTaGGCTGTATACCTCTTCTTGCTCATGGCTCCTCAA +
Preference number: 6 (lower is better)
Translates to: GGIFNSFGLLKT*AVYLFLLMAPQ
Trigger: TTGAGGAGCCATGAGCAAGAAGAGGTATACAGCTCAGGTCTTCAAAAGGCCAAAACTGTTGAAGATTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS GCA 72 bp ACAGCACAATTCCTCACACCCCAGAGTATGGAATCTTaGCTTCAGAACCTGAATGTCACTTGGTGTCTTAGA +
Preference number: 6 (lower is better)
Translates to: TAQFLTPQSMES*LQNLNVTWCLR
Trigger: TCTAAGACACCAAGTGACATTCAGGTTCTGAAGGCAAGATTCCATACTCTGGGGTGTGAGGAATTGTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS GCA 72 bp AAGTCCTTGCACTGCGGGGCTTCCATATGCAGTGTCTaGTTGTGTACCTGTGTGGGTATAGATTGTTTATAT +
Preference number: 6 (lower is better)
Translates to: KSLHCGASICSV*LCTCVGIDCLY
Trigger: ATATAAACAATCTATACCCACACAGGTACACAAGCAGACACTGCATATGGAAGCCCCGCAGTGCAAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS GCA 72 bp GAACAAACCCATGGACTTTGGACCCTTATTCCTGTGTaGCTTCCTCTACTAGAACTGCCTCTTCTTGAGATT +
Preference number: 6 (lower is better)
Translates to: EQTHGLWTLIPV*LPLLELPLLEI
Trigger: AATCTCAAGAAGAGGCAGTTCTAGTAGAGGAAGGCACACAGGAATAAGGGTCCAAAGTCCATGGGTTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CAA 72 bp GTGCCTGACTTCACCACACTGCTATGTGTACTATTATaGCTAAGCGAGCCAGGACACGGAGTTTCTGAATAT +
Preference number: 6 (lower is better)
Translates to: VPDFTTLLCVLL*LSEPGHGVSEY
Trigger: ATATTCAGAAACTCCGTGTCCTGGCTCGCTTAGCAATAATAGTACACATAGCAGTGTGGTGAAGTCAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CAA 72 bp TTTTGCAGACTGCCACATTTACAAGTCTTCAAGAAATaGTTTGGGGAGCCACATGACACCGGGATCACAGGA +
Preference number: 6 (lower is better)
Translates to: FCRLPHLQVFKK*FGEPHDTGITG
Trigger: TCCTGTGATCCCGGTGTCATGTGGCTCCCCAAACAATTTCTTGAAGACTTGTAAATGTGGCAGTCTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CAA 72 bp TCCTTGCACTGCGGGGCTTCCATATGCAGTGTCTGCTaGTGTACCTGTGTGGGTATAGATTGTTTATATCTT +
Preference number: 6 (lower is better)
Translates to: SLHCGASICSVC*CTCVGIDCLYL
Trigger: AAGATATAAACAATCTATACCCACACAGGTACACAAGCAGACACTGCATATGGAAGCCCCGCAGTGCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS CAA 72 bp TATTGGGGGCTCCAAACAGCAACATGTCTGAGTGGTTaGAGGGAACCTGGAATGTGGAGATGTATAGTTTCA +
Preference number: 6 (lower is better)
Translates to: YWGLQTATCLSG*REPGMWRCIVS
Trigger: TGAAACTATACATCTCCACATTCCAGGTTCCCTCAAACCACTCAGACATGTTGCTGTTTGGAGCCCCCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CAA 90 bp TCAAGGGACTGCCAGCTTCTTGCTTACCATGGACATGGATACCATTaGGTTGAAAAGAAGAGTTTGTTTCTGGCTGATAGGACTTCAGGT +
Preference number: 6 (lower is better)
Translates to: SRDCQLLAYHGHGYH*VEKKSLFLADRTSG
Trigger: ACCTGAAGTCCTATCAGCCAGAAACAAACTCTTCTTTTCAACCAAATGGTATCCATGTCCATGGTAAGCAAGAAGCTGGCAGTCCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464391.2
ENST00000467497.6
CDS TCA 72 bp GGTGGAGACTCATGCTGCATGATCTTCCATTCATTCTaGAAAACCTGTGGCCAAGACGGTCAAATATCCAAT +
Preference number: 6 (lower is better)
Translates to: GGDSCCMIFHSF*KTCGQDGQISN
Trigger: ATTGGATATTTGACCGTCTTGGCCACAGGTTTTTCAGAATGAATGGAAGATCATGCAGCATGAGTCTCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000381971.8
ENST00000465708.5
ENST00000471664.1
ENST00000477901.5
ENST00000481827.5
ENST00000491889.6
CDS CCA 72 bp CCAAATATAGTCACCTATTATTCAAACCTAGGCAGATaGAAGGTGGTCTGGGAGTGTCATCCCATCTCCTTT +
Preference number: 6 (lower is better)
Translates to: PNIVTYYSNLGR*KVVWECHPISF
Trigger: AAAGGAGATGGGATGACACTCCCAGACCACCTTCCATCTGCCTAGGTTTGAATAATAGGTGACTATATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463680.6
CDS CCA 72 bp GCAACATGTCTGAGTGGTTTGAGGGAACCTGGAATGTaGAGATGTATAGTTTCAGTAGTTCCTTGGACTGAT +
Preference number: 6 (lower is better)
Translates to: ATCLSGLREPGM*RCIVSVVPWTD
Trigger: ATCAGTCCAAGGAACTACTGAAACTATACATCTCCACATTCCAGGTTCCCTCAAACCACTCAGACATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CAA 72 bp CTGTGCAGAGTACTTGGCATACATTTCCAGGGCTACTaGCTCTTTGGTTTTATAAAATGCAGGCAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: LCRVLGIHFQGY*LFGFIKCRQQE
Trigger: TTCCTGCTGCCTGCATTTTATAAAACCAAAGAGCAAGTAGCCCTGGAAATGTATGCCAAGTACTCTGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478315.5
CDS TCA 72 bp CTTCCACTCATGGCAGAAGGTAAAGAGAAGCAGGCCTaGAAGAAATTCAGAAATAGGCCATCCATGCTAATA +
Preference number: 6 (lower is better)
Translates to: LPLMAEGKEKQA*KKFRNRPSMLI
Trigger: TATTAGCATGGATGGCCTATTTCTGAATTTCTTTCAGGCCTGCTTCTCTTTACCTTCTGCCATGAGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471664.1
CDS GCA 72 bp CACATTAACCCTTTTTACCCTGTCGCATATACTTACTaGAATGGCAGAGGCTGCCAGCTGTGTAGTAAATTA +
Preference number: 6 (lower is better)
Translates to: HINPFYPVAYTY*NGRGCQLCSKL
Trigger: TAATTTACTACACAGCTGGCAGCCTCTGCCATTGCAGTAAGTATATGCGACAGGGTAAAAAGGGTTAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464391.2
CDS CCA 72 bp GCCAGCTTCTTGCTTACCATGGACATGGATACCATTTaGTTGAAAAGAAGAGTTTGTTTCTGGCTGATAGGA +
Preference number: 6 (lower is better)
Translates to: ASFLLTMDMDTI*LKRRVCFWLIG
Trigger: TCCTATCAGCCAGAAACAAACTCTTCTTTTCAACCAAATGGTATCCATGTCCATGGTAAGCAAGAAGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464391.2
ENST00000467497.6
CDS CAA 72 bp TGCCAGCTTCTTGCTTACCATGGACATGGATACCATTaGGTTGAAAAGAAGAGTTTGTTTCTGGCTGATAGG +
Preference number: 6 (lower is better)
Translates to: CQLLAYHGHGYH*VEKKSLFLADR
Trigger: CCTATCAGCCAGAAACAAACTCTTCTTTTCAACCAAATGGTATCCATGTCCATGGTAAGCAAGAAGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464391.2
ENST00000467497.6
CDS CAA 72 bp CTAAATAATGGAGAATGCAGAACAAACCCATGGACTTaGGACCCTTATTCCTGTGTGCCTTCCTCTACTAGA +
Preference number: 6 (lower is better)
Translates to: LNNGECRTNPWT*DPYSCVPSSTR
Trigger: TCTAGTAGAGGAAGGCACACAGGAATAAGGGTCCAAAGTCCATGGGTTTGTTCTGCATTCTCCATTATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS TCA 72 bp TGCTGGGACACTGGGAGGCCTATTCTATGGTTGTTATaGATATTGCCAAAGAATGTCTTAACCGTCCATAAA +
Preference number: 6 (lower is better)
Translates to: CWDTGRPILWLL*ILPKNVLTVHK
Trigger: TTTATGGACGGTTAAGACATTCTTTGGCAATATTCATAACAACCATAGAATAGGCCTCCCAGTGTCCCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS GCA 72 bp TTCGTTACTTCATATTCTCTTGTAGTAGCAGGAGGGTaGCTGACTTCACCACACTGCTATGTGTACTATTAT +
Preference number: 6 (lower is better)
Translates to: FVTSYSLVVAGG*LTSPHCYVYYY
Trigger: ATAATAGTACACATAGCAGTGTGGTGAAGTCAGGCACCCTCCTGCTACTACAAGAGAATATGAAGTAACGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469833.1
CDS CCA 72 bp ATTTTAGCAATAGTGAAGAGCAAGTACTCTGGATCCTaGGGTTCAAATCCTAGCTCAACTACTTACCAACTG +
Preference number: 6 (lower is better)
Translates to: ILAIVKSKYSGS*GSNPSSTTYQL
Trigger: CAGTTGGTAAGTAGTTGAGCTAGGATTTGAACCCCAGGATCCAGAGTACTTGCTCTTCACTATTGCTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CCA 72 bp CCAAAGAATGTCTTAACCGTCCATAAAGATACATACTaGCCCTCTAGGAGTCTATCATCCAAGATAGATCAA +
Preference number: 6 (lower is better)
Translates to: PKNVLTVHKDTY*PSRSLSSKIDQ
Trigger: TTGATCTATCTTGGATGATAGACTCCTAGAGGGCCAGTATGTATCTTTATGGACGGTTAAGACATTCTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CAA 72 bp AGCTTCTTGCTTACCATGGACATGGATACCATTTGGTaGAAAAGAAGAGTTTGTTTCTGGCTGATAGGACTT +
Preference number: 6 (lower is better)
Translates to: SFLLTMDMDTIW*KRRVCFWLIGL
Trigger: AAGTCCTATCAGCCAGAAACAAACTCTTCTTTTCAACCAAATGGTATCCATGTCCATGGTAAGCAAGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464391.2
ENST00000467497.6
CDS CAA 72 bp CAAATCCTAGCTCAACTACTTACCAACTGTGTAGTCTaGGCAAATTACTTAGCTTCTTGGTGCCTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: QILAQLLTNCVV*ANYLASWCLSF
Trigger: AAAACTGAGGCACCAAGAAGCTAAGTAATTTGCCAAGACTACACAGTTGGTAAGTAGTTGAGCTAGGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683926.1
CDS CAA 90 bp ATTCCCTTACTGAGCAAGCTATATATCATTATGAGACCATCATCTTaGACCCTGACACTGAATCATGTATTTTTCCATAGGATTTGCTGG +
Preference number: 6 (lower is better)
Translates to: IPLLSKLYIIMRPSS*TLTLNHVFFHRICW
Trigger: CCAGCAAATCCTATGGAAAAATACATGATTCAGTGTCAGGGTCAAAGATGATGGTCTCATAATGATATATAGCTTGCTCAGTAAGGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465708.5
ENST00000471664.1