RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLIS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000126603

Ensembl transcript IDs: ENST00000262366.7, ENST00000433375.2, ENST00000612491.1, ENST00000633051.1

Found 640 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTaGCACCTCCCCTTGCCAGCTCAGGGGCCCTCGGACCTGCTTCCC +
Preference number: 1 (lower is better)
Translates to: EPGPRSLSILAPQLA*HLPLPAQGPSDLLP
Trigger: GGGAAGCAGGTCCGAGGGCCCCTGAGCTGGCAAGGGGAGGTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR CCA 90 bp TCCCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTaGCCTGGCACCTCCCCTTGCCAGCTCAGGGGCCCTCGGACCTGC +
Preference number: 1 (lower is better)
Translates to: SLSQGPGHSVSWHHS*PGTSPCQLRGPRTC
Trigger: GCAGGTCCGAGGGCCCCTGAGCTGGCAAGGGGAGGTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR CCA 90 bp GGGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTaGGGCACAAGGCCCTCCAGCACCACCCTTAAGTGGTTCTGGCCC +
Preference number: 1 (lower is better)
Translates to: GCMAASIPQGVLGWD*GTRPSSTTLKWFWP
Trigger: GGGCCAGAACCACTTAAGGGTGGTGCTGGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR CCA 90 bp GAGGAGGTCGGGCAGGGGAAAGCCTCTCAGAAGCTGAGGGCCAGGTaGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACA +
Preference number: 1 (lower is better)
Translates to: EEVGQGKASQKLRAR*WGTDRSEASAPRST
Trigger: TGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGGCCCTCAGCTTCTGAGAGGCTTTCCCCTGCCCGACCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR TCA 90 bp TTTACAGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTaGCAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: FTDGEVEGPGHSEAW*QGRPRSQNSQLPGG
Trigger: CCCACCTGGCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCTGTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCCTGGCACCTCCCCTTaGCAGCTCAGGGGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSPGTSP*QLRGPR
Trigger: CCGAGGGCCCCTGAGCTGGCAAGGGGAGGTGCCAGG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCACTGCAGGCCTGGCCTaGGGTGAGGACGGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSTAGLA*GEDGGC
Trigger: GCAGCCGCCGTCCTCACCCCAGGCCAGGCCTGCAGT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCACGGGGCGCTGGGCCTaGCCCCACATGCTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSTGRWA*PHMLPE
Trigger: CTCAGGGAGCATGTGGGGCCAGGCCCAGCGCCCCGT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAAGGCCTGGCCTGGGGTaGGGACGGCGGCTGCAGAGC +
Preference number: 2 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQRPGLG*GRRLQS
Trigger: GCTCTGCAGCCGCCGTCCTCACCCCAGGCCAGGCCT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGACCCAAAGGCCTCTaGAGGGGGCGCTGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGPKGL*RGRCPG
Trigger: GCCTGGGCAGCGCCCCCTGCAGAGGCCTTTGGGTCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCACGGGGCGCTGGGCCTaGCCCCACATGCTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQATGRWA*PHMLPE
Trigger: CTCAGGGAGCATGTGGGGCCAGGCCCAGCGCCCCGT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAGGAAGACGGGGCGCTaGGCCTGGCCCCACATGCTC +
Preference number: 2 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRKTGR*AWPHML
Trigger: GAGCATGTGGGGCCAGGCCCAGCGCCCCGTCTTCCT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAGGCCTGGCCTGGGGTaGGGACGGCGGCTGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHRPGLG*GRRLQS
Trigger: GCTCTGCAGCCGCCGTCCTCACCCCAGGCCAGGCCT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGGCCTGGCCTGGGGTaGGGACGGCGGCTGCAGAGC +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDRPGLG*GRRLQS
Trigger: GCTCTGCAGCCGCCGTCCTCACCCCAGGCCAGGCCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCAGCAGGGAGGGCAGATaGCACCCCACCCACCCCCTC +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQASREGR*HPTHPL
Trigger: GAGGGGGTGGGTGGGGTGGCATCTGCCCTCCCTGCT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCAGGCCTCTGGTCCCTaGGGGCTCCTCTCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSQASGP*GLLSGR
Trigger: CCTTCCTGAGAGGAGCCCCCAGGGACCAGAGGCCTG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCTGGTACTGCAGGCCTaGCCTGGGGTGAGGACGGCG +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQALVLQA*PGVRTA
Trigger: CGCCGTCCTCACCCCAGGCCAGGCCTGCAGTACCAG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCCTGGGGTGCAGGGGTaGAGTGGCCAGCTATCCCGT +
Preference number: 2 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSPGVQG*SGQLSR
Trigger: ACGGGATAGCTGGCCACTCCACCCCTGCACCCCAGG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCACAGCTCTCCCTGCATaGCAGGCCAGGTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQATALPA*QARSPP
Trigger: GGGTGGGGACCTGGCCTGTCATGCAGGGAGAGCTGT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGTGGGGAAGTGCCTCTaGGAAAGCGGCCCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAVGKCL*ESGPAG
Trigger: CCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCAC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCCCACCCACCCCCTCTaGTGGGAGAGGGCAACTTGC +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAPTHPL*WERATC
Trigger: GCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGTGGG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAAGGGGCCCTCGGACCTaGTTCCCACGCTCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQRGPRT*FPRSQG
Trigger: ACCCTGGGAGCGTGGGAAGCAGGTCCGAGGGCCCCT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCCTGGCACCTCCCCTTaGCAGCTCAGGGGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCPGTSP*QLRGPR
Trigger: CCGAGGGCCCCTGAGCTGGCAAGGGGAGGTGCCAGG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCCTGGGGTGCAGGGGTaGAGTGGCCAGCTATCCCGT +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAPGVQG*SGQLSR
Trigger: ACGGGATAGCTGGCCACTCCACCCCTGCACCCCAGG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCACGGGGCGCTGGGCCTaGCCCCACATGCTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCTGRWA*PHMLPE
Trigger: CTCAGGGAGCATGTGGGGCCAGGCCCAGCGCCCCGT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGTCCTGGGATGGGACTaGGGCACAAGGCCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAVLGWD*GTRPSS
Trigger: GCTGGAGGGCCTTGTGCCCCAGTCCCATCCCAGGAC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAACAGCTCTCCCTGCATaGCAGGCCAGGTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQTALPA*QARSPP
Trigger: GGGTGGGGACCTGGCCTGTCATGCAGGGAGAGCTGT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGAGCACAGCTCTCCCTaGATGACAGGCCAGGTCCCC +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAEHSSP*MTGQVP
Trigger: GGGGACCTGGCCTGTCATGCAGGGAGAGCTGTGCTC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGCAGGGAGGGCAGATaGCACCCCACCCACCCCCTC +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDSREGR*HPTHPL
Trigger: GAGGGGGTGGGTGGGGTGGCATCTGCCCTCCCTGCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAGGGGCCCTCGGACCTaGTTCCCACGCTCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCRGPRT*FPRSQG
Trigger: ACCCTGGGAGCGTGGGAAGCAGGTCCGAGGGCCCCT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAGGGGCCCTCGGACCTaGTTCCCACGCTCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHRGPRT*FPRSQG
Trigger: ACCCTGGGAGCGTGGGAAGCAGGTCCGAGGGCCCCT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGAAGGGCAGGCCTCTaGTCCCTGGGGGCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGRAGL*SLGAPL
Trigger: GAGAGGAGCCCCCAGGGACCAGAGGCCTGCCCTTCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGTGCAGGGGTGGAGTaGCCAGCTATCCCGTCTGGT +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGAGVE*PAIPSG
Trigger: ACCAGACGGGATAGCTGGCCACTCCACCCCTGCACC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACCTGGGGTGCAGGGGTaGAGTGGCCAGCTATCCCGT +
Preference number: 2 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQPGVQG*SGQLSR
Trigger: ACGGGATAGCTGGCCACTCCACCCCTGCACCCCAGG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAGGAAGACGGGGCGCTaGGCCTGGCCCCACATGCTC +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCRKTGR*AWPHML
Trigger: GAGCATGTGGGGCCAGGCCCAGCGCCCCGTCTTCCT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCTGCATGCTGTCACTTaGAGCCCCCAGACCAGGAGC +
Preference number: 2 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSLHAVT*SPQTRS
Trigger: GCTCCTGGTCTGGGGGCTCCAAGTGACAGCATGCAG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAGCACCACCCTTAAGTaGTTCTGGCCCCTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSSTTLK*FWPLPG
Trigger: CCCTGGCAGGGGCCAGAACCACTTAAGGGTGGTGCT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTCCCTCAGGGCGTCCTaGGATGGGACTGGGGCACAA +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQASLRAS*DGTGAQ
Trigger: TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTGGGTGGTCACTAGGTaGGGGAGGTGCCAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDWVVTR*GRCQGG
Trigger: CCCACCCTGGCACCTCCCTCACCTAGTGACCACCCA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCTCCCAACACAGCACTaGCTGGGAGCCCCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCLPTQH*LGAPSP
Trigger: AGGGGAGGGGGCTCCCAGTCAGTGCTGTGTTGGGAG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCCCACCCACCCCCTCTaGTGGGAGAGGGCAACTTGC +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDPTHPL*WERATC
Trigger: GCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGTGGG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAAGTGGTTCTGGCCCCTaGCAGGGTCCCTCTGAGTGG +
Preference number: 2 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQSGSGP*QGPSEW
Trigger: CCACTCAGAGGGACCCTGGCAGGGGCCAGAACCACT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCAGGCCTCTGGTCCCTaGGGGCTCCTCTCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCQASGP*GLLSGR
Trigger: CCTTCCTGAGAGGAGCCCCCAGGGACCAGAGGCCTG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCCCCAGGGCAGGGGCTaGGTAAGCCTAGGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDPQGRG*VSLGGK
Trigger: CTTCCCTCCTAGGCTTACCCAGCCCCTGCCCTGGGG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCTGTGTCCCAGCCTGTaGTCGGTCGTCCCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCLCPSL*SVVPSQ
Trigger: CTGGCTGGGGACGACCGACCACAGGCTGGGACACAG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCAACACAGCACTGACTaGGAGCCCCCTCCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAQHSTD*EPPPLH
Trigger: ATGCAGGGGAGGGGGCTCCCAGTCAGTGCTGTGTTG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCACCCTTAAGTGGTTCTaGCCCCTGCCAGGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQATLKWF*PLPGSL
Trigger: GAGGGACCCTGGCAGGGGCCAGAACCACTTAAGGGT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGAGGCCAGCCATGAATaGCCTAGCACCATCCTTGCT +
Preference number: 2 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSEASHE*PSTILA
Trigger: AGCAAGGATGGTGCTAGGTCATTCATGGCTGGCCTC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGAGCACAGCTCTCCCTaGATGACAGGCCAGGTCCCC +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDEHSSP*MTGQVP
Trigger: GGGGACCTGGCCTGTCATGCAGGGAGAGCTGTGCTC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGAGCACAGCTCTCCCTaGATGACAGGCCAGGTCCCC +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCEHSSP*MTGQVP
Trigger: GGGGACCTGGCCTGTCATGCAGGGAGAGCTGTGCTC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGAGGCGCCTTGTCCTaGGGGGCATGCTTCTACCTG +
Preference number: 2 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGGALS*GACFYL
Trigger: CAGGTAGAAGCATGCCCCCCAGGACAAGGCGCCTCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGGAGGCGCCTTGTCCTaGGGGGCATGCTTCTACCTG +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDGGALS*GACFYL
Trigger: CAGGTAGAAGCATGCCCCCCAGGACAAGGCGCCTCC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACACTGCAGGCCTGGCCTaGGGTGAGGACGGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: WGSASEKAAQQGKARGSNTAGLA*GEDGGC
Trigger: GCAGCCGCCGTCCTCACCCCAGGCCAGGCCTGCAGT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGCCAGCTATCCCGTCTaGTACTGCAGGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHASYPV*YCRPGL
Trigger: CAGGCCAGGCCTGCAGTACCAGACGGGATAGCTGGC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGTGCAGGGGTGGAGTaGCCAGCTATCCCGTCTGGT +
Preference number: 2 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGAGVE*PAIPSG
Trigger: ACCAGACGGGATAGCTGGCCACTCCACCCCTGCACC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGGTGCAGGGGTGGAGTaGCCAGCTATCCCGTCTGGT +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDGAGVE*PAIPSG
Trigger: ACCAGACGGGATAGCTGGCCACTCCACCCCTGCACC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGTCACTCAGTATCTTaGCACCACAGCTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGHSVS*HHSWPG
Trigger: GCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACTGCATGCTGTCACTTaGAGCCCCCAGACCAGGAGC +
Preference number: 2 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQLHAVT*SPQTRS
Trigger: GCTCCTGGTCTGGGGGCTCCAAGTGACAGCATGCAG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACAACACAGCACTGACTaGGAGCCCCCTCCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQQHSTD*EPPPLH
Trigger: ATGCAGGGGAGGGGGCTCCCAGTCAGTGCTGTGTTG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGAAGCAACGTGTCATaGGTCCAGCACCCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGSNVS*VQHPPP
Trigger: TGGAGGAGGGTGCTGGACCCATGACACGTTGCTTCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGAGGCCAGCCATGAATaGCCTAGCACCATCCTTGCT +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAEASHE*PSTILA
Trigger: AGCAAGGATGGTGCTAGGTCATTCATGGCTGGCCTC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAGCAGGGAGGGCAGATaGCACCCCACCCACCCCCTC +
Preference number: 2 (lower is better)
Translates to: WGSASEKAAQQGKARGSNSREGR*HPTHPL
Trigger: GAGGGGGTGGGTGGGGTGGCATCTGCCCTCCCTGCT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCTGCATCTGTCTTaGTTTCCCTCTGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGLHLS*FPSGGR
Trigger: CCTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGCAACTTGCCATGGGTaGTCACTAGGTGAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAATCHG*SLGEGG
Trigger: ACCTCCCTCACCTAGTGACCACCCATGGCAAGTTGC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCCCACCCACCCCCTCTaGTGGGAGAGGGCAACTTGC +
Preference number: 2 (lower is better)
Translates to: WGSASEKAAQQGKARGSNPTHPL*WERATC
Trigger: GCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGTGGG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGGCCTGCATCTGTCTTaGTTTCCCTCTGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCGLHLS*FPSGGR
Trigger: CCTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGGGAGCCCCCTCCCCTaGATGCTGTCACTTGGAGCC +
Preference number: 2 (lower is better)
Translates to: WGSASEKAAQQGKARGSNGSPLP*MLSLGA
Trigger: GGCTCCAAGTGACAGCATGCAGGGGAGGGGGCTCCC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCCCCAGGGCAGGGGCTaGGTAAGCCTAGGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: WGSASEKAAQQGKARGSNPQGRG*VSLGGK
Trigger: CTTCCCTCCTAGGCTTACCCAGCCCCTGCCCTGGGG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGGTCACTCAGTATCTTaGCACCACAGCTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCGHSVS*HHSWPG
Trigger: GCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTGGGAGAGGGCAACTTaGCATGGGTGGTCACTAGGT +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDWERAT*HGWSLG
Trigger: ACCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTTCTACCTGGGGCTTTaGAGGGGCCTGCATCTGTCT +
Preference number: 2 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDFYLGL*RGLHLS
Trigger: AGACAGATGCAGGCCCCTGCAAAGCCCCAGGTAGAA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGCAACTTGCCATGGGTaGTCACTAGGTGAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHATCHG*SLGEGG
Trigger: ACCTCCCTCACCTAGTGACCACCCATGGCAAGTTGC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGTCTTGCTTTCCCTCTaGAGGCAGGGTCAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHVLLSL*RQGQRE
Trigger: TTCCCTCTGACCCTGCCTCCAGAGGGAAAGCAAGAC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGGTCACTCAGTATCTTaGCACCACAGCTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: WGSASEKAAQQGKARGSNGHSVS*HHSWPG
Trigger: GCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR TCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGAGGCCAGCCATGAATaGCCTAGCACCATCCTTGCT +
Preference number: 2 (lower is better)
Translates to: WGSASEKAAQQGKARGSNEASHE*PSTILA
Trigger: AGCAAGGATGGTGCTAGGTCATTCATGGCTGGCCTC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACTGGGAGAGGGCAACTTaGCATGGGTGGTCACTAGGT +
Preference number: 2 (lower is better)
Translates to: WGSASEKAAQQGKARGSNWERAT*HGWSLG
Trigger: ACCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCA...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR CCA 72 bp GGGGGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTaGGATGGGACTGGGGCACAAGGCCCTCCAGCACCA +
Preference number: 3 (lower is better)
Translates to: GGAWLRPSLRAS*DGTGAQGPPAP
Trigger: TGGTGCTGGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGACCTAGCACCATCCTaGCTCCCGGCGGGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCDLAPS*LPAGWA
Trigger: AGCCCAGCCCGCCGGGAGCAAGGATGGTGCTAGGTC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCTGGGAGAGGGCAACTaGCCATGGGTGGTCACTAGG +
Preference number: 3 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSLGEGN*PWVVTR
Trigger: CCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCAG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR CCA 72 bp CCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTaGCACCTCCCCTTGCCAGCTCAGGGGCCCTCGGAC +
Preference number: 3 (lower is better)
Translates to: PRSLSILAPQLA*HLPLPAQGPSD
Trigger: GTCCGAGGGCCCCTGAGCTGGCAAGGGGAGGTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR CCA 72 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTaGGGCACAAGGCCCTCCAGCACCACCCTTAAGTGG +
Preference number: 3 (lower is better)
Translates to: AASIPQGVLGWD*GTRPSSTTLKW
Trigger: CCACTTAAGGGTGGTGCTGGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGGCCTGCATCTGTCTaGCTTTCCCTCTGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGPASV*LSLWRQ
Trigger: CTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAGGTCACTCAGTATCTaGGCACCACAGCTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRSLSI*APQLAW
Trigger: CCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACCTGCATGCTGTCACTaGGAGCCCCCAGACCAGGAG +
Preference number: 3 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQPACCH*EPPDQE
Trigger: CTCCTGGTCTGGGGGCTCCAAGTGACAGCATGCAGG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR CCA 72 bp CCCAAGGCTGTCCGGGCAGCTGCCTCGTTTTACAGATaGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: PKAVRAAASFYR*GGGRAWPLRGL
Trigger: CAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCTGTAAAACGAGGCAGCTGCCCGGACAGCCTTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGGCCTGCATCTGTCTaGCTTTCCCTCTGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGPASV*LSLWRQ
Trigger: CTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCCC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCAGGTCACTCAGTATCTaGGCACCACAGCTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQARSLSI*APQLAW
Trigger: CCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCCTGCATGCTGTCACTaGGAGCCCCCAGACCAGGAG +
Preference number: 3 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCPACCH*EPPDQE
Trigger: CTCCTGGTCTGGGGGCTCCAAGTGACAGCATGCAGG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCTGGGAGAGGGCAACTaGCCATGGGTGGTCACTAGG +
Preference number: 3 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDLGEGN*PWVVTR
Trigger: CCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCAG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCCTGCATGCTGTCACTaGGAGCCCCCAGACCAGGAG +
Preference number: 3 (lower is better)
Translates to: WGSASEKAAQQGKARGSNPACCH*EPPDQE
Trigger: CTCCTGGTCTGGGGGCTCCAAGTGACAGCATGCAGG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGGGCCTGCATCTGTCTaGCTTTCCCTCTGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: WGSASEKAAQQGKARGSNGPASV*LSLWRQ
Trigger: CTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCCC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAGGTCACTCAGTATCTaGGCACCACAGCTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: WGSASEKAAQQGKARGSNRSLSI*APQLAW
Trigger: CCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGCAGTAGGACATTATaGCTATTTCACAGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGSRTL*LFHRRV
Trigger: AACTCTTCTGTGAAATAGCAATAATGTCCTACTGCC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCAGTAGGACATTATaGCTATTTCACAGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGSRTL*LFHRRV
Trigger: AACTCTTCTGTGAAATAGCAATAATGTCCTACTGCC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGGCAGTAGGACATTATaGCTATTTCACAGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCGSRTL*LFHRRV
Trigger: AACTCTTCTGTGAAATAGCAATAATGTCCTACTGCC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGGCAGTAGGACATTATaGCTATTTCACAGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: WGSASEKAAQQGKARGSNGSRTL*LFHRRV
Trigger: AACTCTTCTGTGAAATAGCAATAATGTCCTACTGCC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
3UTR TCA 72 bp AATACTGACGTCCTGGAATGTGCAACAACACACCAATaGCAACCACAAAAAGTACACCGGCCCTGCCGAGCC +
Preference number: 3 (lower is better)
Translates to: NTDVLECATTHQ*QPQKVHRPCRA
Trigger: GGCTCGGCAGGGCCGGTGTACTTTTTGTGGTTGTCATTGGTGTGTTGTTGCACATTCCAGGACGTCAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCCGAGCCCGGCGGGATaGCCACCCAGCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSPSPAG*PPSQGP
Trigger: TGGCCCCTGGCTGGGTGGTCATCCCGCCGGGCTCGG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCACAGGCCAGGGCACTaGGGTCAAGGGGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSHRPGH*GQGGRG
Trigger: CCCCCGGCCCCCTTGACCTCAGTGCCCTGGCCTGTG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAGGCCTGGCCTGGGGTaGGGACGGCGGCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRPGLG*GRRLQS
Trigger: GCTCTGCAGCCGCCGTCCTCACCCCAGGCCAGGCCT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAGGCAGGACGGGGCCTaGCAGCCCAGGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRQDGA*QPRAHA
Trigger: GGCATGGGCCCTGGGCTGCCAGGCCCCGTCCTGCCT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACCGAGCCCGGCGGGATaGCCACCCAGCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQPSPAG*PPSQGP
Trigger: TGGCCCCTGGCTGGGTGGTCATCCCGCCGGGCTCGG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTGGACATCAGCACCCTaGGCGGCGCCCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAWTSAP*AAPAAR
Trigger: CCTGGCCGCGGGCGCCGCGCAGGGTGCTGATGTCCA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAGGCCCAGCTCCCTGTaGAGAGCACGGGGCCGGACC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRPSSL*RARGRT
Trigger: GGTCCGGCCCCGTGCTCTGCACAGGGAGCTGGGCCT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGACCCAAAGGCCTCTaGAGGGGGCGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGPKGL*RGRCPG
Trigger: GCCTGGGCAGCGCCCCCTGCAGAGGCCTTTGGGTCC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCGGGCAGTGGCGGCTTaGGGGGTGGGCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQARAVAA*GVGAAA
Trigger: TGCAGCTGCGCCCACCCCCCAAGCCGCCACTGCCCG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCCTCTCTGCGGGCCCTaGTTTCTCCGCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSPLCGP*FLRPAQ
Trigger: CTGGGCTGGGCGGAGAAATCAGGGCCCGCAGAGAGG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACACAGGCCAGGGCACTaGGGTCAAGGGGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQHRPGH*GQGGRG
Trigger: CCCCCGGCCCCCTTGACCTCAGTGCCCTGGCCTGTG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCCGAGCCCGGCGGGATaGCCACCCAGCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHPSPAG*PPSQGP
Trigger: TGGCCCCTGGCTGGGTGGTCATCCCGCCGGGCTCGG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCTCACCACAGCCGGTTTaGGCAGCACCGAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSSPQPV*AAPSPA
Trigger: CGCCGGGCTCGGTGCTGCTCAAACCGGCTGTGGTGA...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGCTCGTCCAGGGAGTaGATGGTGAGGGGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGSSRE*MVRGPE
Trigger: CTCCGGCCCCCTCACCATGCACTCCCTGGACGAGCC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAGCAGGGAGGGCAGATaGCACCCCACCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSSREGR*HPTHPL
Trigger: GAGGGGGTGGGTGGGGTGGCATCTGCCCTCCCTGCT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAGGGGCCCTCGGACCTaGTTCCCACGCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRGPRT*FPRSQG
Trigger: ACCCTGGGAGCGTGGGAAGCAGGTCCGAGGGCCCCT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCCTGGCACCTCCCCTTaGCAGCTCAGGGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAPGTSP*QLRGPR
Trigger: CCGAGGGCCCCTGAGCTGGCAAGGGGAGGTGCCAGG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCGAGGCACTGGGCACTaGAGGCAGGTCCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRGTGH*RQVPVA
Trigger: GGCAACGGGGACCTGCCTCCAGTGCCCAGTGCCTCG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGTTCAGCAGGAAGCCTaGGGGCGGGGAGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSVQQEA*GRGAWR
Trigger: TCTCCAGGCTCCCCGCCCTCAGGCTTCCTGCTGAAC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCACAGGCCAGGGCACTaGGGTCAAGGGGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDHRPGH*GQGGRG
Trigger: CCCCCGGCCCCCTTGACCTCAGTGCCCTGGCCTGTG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCACAGCTCTCCCTGCATaGCAGGCCAGGTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSTALPA*QARSPP
Trigger: GGGTGGGGACCTGGCCTGTCATGCAGGGAGAGCTGT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAGGCCTGGCCTGGGGTaGGGACGGCGGCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCRPGLG*GRRLQS
Trigger: GCTCTGCAGCCGCCGTCCTCACCCCAGGCCAGGCCT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGTGGGGAAGTGCCTCTaGGAAAGCGGCCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSVGKCL*ESGPAG
Trigger: CCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCAC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTGGACATCAGCACCCTaGGCGGCGCCCGCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCWTSAP*AAPAAR
Trigger: CCTGGCCGCGGGCGCCGCGCAGGGTGCTGATGTCCA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGTCCCGGATCCCGATaGCGGGCGGCGCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGPGSR*RAAQTS
Trigger: ACTGGTTTGCGCCGCCCGGCATCGGGATCCGGGACC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGGACAGCGAGCTGCTaGCATTGGGGGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGTASC*HWGSPA
Trigger: GGCTGGACTCCCCCAATGGCAGCAGCTCGCTGTCCC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGAGGCAGGTCCCCGTTaGCCTGGCGCTCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQEAGPR*PGARGT
Trigger: TGTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGAGGCAGGTCCCCGTTaGCCTGGCGCTCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLEAGPR*PGARGT
Trigger: TGTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGGGGTGGGCGCAGCTaGAGGAGCTCTTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGGGRS*RSSCCS
Trigger: CGAGCAGCAAGAGCTCCTGCAGCTGCGCCCACCCCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCCTGGCACCTCCCCTTaGCAGCTCAGGGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLPGTSP*QLRGPR
Trigger: CCGAGGGCCCCTGAGCTGGCAAGGGGAGGTGCCAGG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCAGGTCCCCGTTGCCCTaGCGCTCGGGGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLRSPLP*RSGDSE
Trigger: CTCGCTGTCCCCCGAGCGCCAGGGCAACGGGGACCT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAAGGTCCCCGTTGCCCTaGCGCTCGGGGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQRSPLP*RSGDSE
Trigger: CTCGCTGTCCCCCGAGCGCCAGGGCAACGGGGACCT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGAAGTCCGAGGCACTaGGCACTGGAGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGSPRH*ALEAGP
Trigger: GGGACCTGCCTCCAGTGCCCAGTGCCTCGGACTTCC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCTTGAAACCTCGGCCATaGCGGGCGCAGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSLKPRP*RAQPSQ
Trigger: CTGGGAGGGCTGCGCCCGCCATGGCCGAGGTTTCAA...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCGGGCAGTGGCGGCTTaGGGGGTGGGCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCRAVAA*GVGAAA
Trigger: TGCAGCTGCGCCCACCCCCCAAGCCGCCACTGCCCG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCGGGCAGTGGCGGCTTaGGGGGTGGGCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHRAVAA*GVGAAA
Trigger: TGCAGCTGCGCCCACCCCCCAAGCCGCCACTGCCCG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTAGGCAGGACGGGGCCTaGCAGCCCAGGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSRQDGA*QPRAHA
Trigger: GGCATGGGCCCTGGGCTGCCAGGCCCCGTCCTGCCT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTGCCCAGGGCCCTGGTaGGCACCGACCCACGCCCCT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCCPGPW*APTHAP
Trigger: AGGGGCGTGGGTCGGTGCCCACCAGGGCCCTGGGCA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTTGCCCAGGGCCCTGGTaGGCACCGACCCACGCCCCT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSCPGPW*APTHAP
Trigger: AGGGGCGTGGGTCGGTGCCCACCAGGGCCCTGGGCA...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTGCCCAGGGCCCTGGTaGGCACCGACCCACGCCCCT +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDCPGPW*APTHAP
Trigger: AGGGGCGTGGGTCGGTGCCCACCAGGGCCCTGGGCA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCCATGCCCAGGGCCCTaGTGGGCACCGACCCACGCC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDPCPGP*WAPTHA
Trigger: GGCGTGGGTCGGTGCCCACCAGGGCCCTGGGCATGG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCCATGCCCAGGGCCCTaGTGGGCACCGACCCACGCC +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCPCPGP*WAPTHA
Trigger: GGCGTGGGTCGGTGCCCACCAGGGCCCTGGGCATGG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAACTGCAGGCCTGGCCTaGGGTGAGGACGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQTAGLA*GEDGGC
Trigger: GCAGCCGCCGTCCTCACCCCAGGCCAGGCCTGCAGT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCACGGGGCGCTGGGCCTaGCCCCACATGCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLTGRWA*PHMLPE
Trigger: CTCAGGGAGCATGTGGGGCCAGGCCCAGCGCCCCGT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCAGGAAGACGGGGCGCTaGGCCTGGCCCCACATGCTC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQARKTGR*AWPHML
Trigger: GAGCATGTGGGGCCAGGCCCAGCGCCCCGTCTTCCT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCTGTGTCCCAGCCTGTaGTCGGTCGTCCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSLCPSL*SVVPSQ
Trigger: CTGGCTGGGGACGACCGACCACAGGCTGGGACACAG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGGCAGCGAGTGCAGTaGGCGGATACACGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGQRVQ*ADTREG
Trigger: TCCCTCGCGTGTATCCGCTCACTGCACTCGCTGCCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCTGCTGGCAGCTGAGTTaGCGCCCGTGGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSCWQLS*RPWTGP
Trigger: TGGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCA...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTGGGCTGCTGGCAGCTaGGTTGACGCCCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAWAAGS*VDARGQ
Trigger: CTGTCCACGGGCGTCAACTCAGCTGCCAGCAGCCCA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCACCACAGCCGGTTTaGGCAGCACCGAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLSPQPV*AAPSPA
Trigger: CGCCGGGCTCGGTGCTGCTCAAACCGGCTGTGGTGA...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGCCAGGGCAGCGAGTaGAGTGAGCGGATACACGCG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGQGSE*SERIHA
Trigger: CGCGTGTATCCGCTCACTGCACTCGCTGCCCTGGCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGCGACTCCCTGCCGTaGCCTCGGTCTCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGDSLP*PRSQFP
Trigger: GGGAAACTGAGACCGAGGGCACGGCAGGGAGTCGCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGGCTCGTCCAGGGAGTaGATGGTGAGGGGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLGSSRE*MVRGPE
Trigger: CTCCGGCCCCCTCACCATGCACTCCCTGGACGAGCC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTAGGCCCAGCTCCCTGTaGAGAGCACGGGGCCGGACC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSRPSSL*RARGRT
Trigger: GGTCCGGCCCCGTGCTCTGCACAGGGAGCTGGGCCT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGAGGCAGGTCCCCGTTaGCCTGGCGCTCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSEAGPR*PGARGT
Trigger: TGTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGCGGGAGAAGCTCTTaGTGCAGGTCGGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGGRSS*CRSDSG
Trigger: ACCGCTGTCCGACCTGCAGCAAGAGCTTCTCCCGCC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGGACCCAAAGGCCTCTaGAGGGGGCGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDGPKGL*RGRCPG
Trigger: GCCTGGGCAGCGCCCCCTGCAGAGGCCTTTGGGTCC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGACCCAAAGGCCTCTaGAGGGGGCGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGPKGL*RGRCPG
Trigger: GCCTGGGCAGCGCCCCCTGCAGAGGCCTTTGGGTCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGGAGCCCCCTCCCCTaGATGCTGTCACTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGSPLP*MLSLGA
Trigger: GGCTCCAAGTGACAGCATGCAGGGGAGGGGGCTCCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCTCGTCGGCCTTCCAGTaGCCTGTTCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSSSAFQ*PVPPLC
Trigger: GCAGAGCGGAGGAACAGGGCACTGGAAGGCCGACGA...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTAGGTCCCCGTTGCCCTaGCGCTCGGGGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSRSPLP*RSGDSE
Trigger: CTCGCTGTCCCCCGAGCGCCAGGGCAACGGGGACCT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAGGTCCCCGTTGCCCTaGCGCTCGGGGGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCRSPLP*RSGDSE
Trigger: CTCGCTGTCCCCCGAGCGCCAGGGCAACGGGGACCT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCGAGGCACTGGGCACTaGAGGCAGGTCCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLRGTGH*RQVPVA
Trigger: GGCAACGGGGACCTGCCTCCAGTGCCCAGTGCCTCG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGGCAGGGGCAGGTCTaGCGAGAGGCACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGQGQV*REALVL
Trigger: AAGGACAAGTGCCTCTCGCCAGACCTGCCCCTGCCC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGCGCAGCCCTCCCAGTaGCAGCAGTACCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLAQPSQ*QQYPAS
Trigger: GGATGCGGGGTACTGCTGCCACTGGGAGGGCTGCGC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGAGTCCATCGGGGCTTaGCCGGGAGCAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAESIGA*PGAAAL
Trigger: GAGAGCAGCTGCTCCCGGCCAAGCCCCGATGGACTC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGTCCAGCACGGTGCCTaGCAGCAGGGGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAVQHGA*QQGESI
Trigger: GATGGACTCCCCCTGCTGCCAGGCACCGTGCTGGAC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGGAAGGGCAGGCCTCTaGTCCCTGGGGGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLGRAGL*SLGAPL
Trigger: GAGAGGAGCCCCCAGGGACCAGAGGCCTGCCCTTCC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGAAGGGCAGGCCTCTaGTCCCTGGGGGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGRAGL*SLGAPL
Trigger: GAGAGGAGCCCCCAGGGACCAGAGGCCTGCCCTTCC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCCCCAGGGCAGGGGCTaGGTAAGCCTAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAPQGRG*VSLGGK
Trigger: CTTCCCTCCTAGGCTTACCCAGCCCCTGCCCTGGGG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTACTGCAGGCCTGGCCTaGGGTGAGGACGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSTAGLA*GEDGGC
Trigger: GCAGCCGCCGTCCTCACCCCAGGCCAGGCCTGCAGT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGCCAGCTATCCCGTCTaGTACTGCAGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSASYPV*YCRPGL
Trigger: CAGGCCAGGCCTGCAGTACCAGACGGGATAGCTGGC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGTGCAGGGGTGGAGTaGCCAGCTATCCCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGAGVE*PAIPSG
Trigger: ACCAGACGGGATAGCTGGCCACTCCACCCCTGCACC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCTGTGTCCCAGCCTGTaGTCGGTCGTCCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQALCPSL*SVVPSQ
Trigger: CTGGCTGGGGACGACCGACCACAGGCTGGGACACAG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGGGGCAGAGCCAGTGTaGCTGGGCCCTGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLGAEPV*LGPVRA
Trigger: AGCCCTGACAGGGCCCAGCCACACTGGCTCTGCCCC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCGGCCCTGCCGAGCCTaGTCCGTCACCGAGTCGCAT +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLRPCRA*SVTESH
Trigger: ATGCGACTCGGTGACGGACCAGGCTCGGCAGGGCCG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAACCCCTCACGCTGGTaGGACGGCGGGCGACTCCCT +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDNPSRW*DGGRLP
Trigger: AGGGAGTCGCCCGCCGTCTCACCAGCGTGAGGGGTT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR TCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAACCCCTCACGCTGGTaGGACGGCGGGCGACTCCCT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCNPSRW*DGGRLP
Trigger: AGGGAGTCGCCCGCCGTCTCACCAGCGTGAGGGGTT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCATGGTGGTGACAGGCTaGGGTCCACGAGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAMVVTG*GPREGL
Trigger: CAGCCCCTCTCGTGGACCTCAGCCTGTCACCACCAT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGGGCTGCTGGCAGCTaGGTTGACGCCCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLWAAGS*VDARGQ
Trigger: CTGTCCACGGGCGTCAACTCAGCTGCCAGCAGCCCA...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACTCCCAACACAGCACTaGCTGGGAGCCCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQLPTQH*LGAPSP
Trigger: AGGGGAGGGGGCTCCCAGTCAGTGCTGTGTTGGGAG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAACGACGAGGCCCGATaGCGAGCAATCCGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSNDEAR*RAIRAS
Trigger: GGAAGCTCGGATTGCTCGGCATCGGGCCTCGTCGTT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGGTCCCGGATCCCGATaGCGGGCGGCGCAAACCAGT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSGPGSR*RAAQTS
Trigger: ACTGGTTTGCGCCGCCCGGCATCGGGATCCGGGACC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGAAGGCGGCAGGAATaGCTCTCTGCGGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGRRQE*LSAGPD
Trigger: ATCAGGGCCCGCAGAGAGGCATTCCTGCCGCCTTCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGCTCGTCCAGGGAGTaGATGGTGAGGGGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGSSRE*MVRGPE
Trigger: CTCCGGCCCCCTCACCATGCACTCCCTGGACGAGCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCTCCCGCTTCTCTCTTaGCGCCCGGAGCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSLPLLS*RPELGD
Trigger: ATCACCAAGCTCCGGGCGGCAAGAGAGAAGCGGGAG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGGACAGCGAGCTGCTaGCATTGGGGGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGTASC*HWGSPA
Trigger: GGCTGGACTCCCCCAATGGCAGCAGCTCGCTGTCCC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCGGGGGACAGCGAGCTaGTGCCATTGGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLRGTAS*CHWGSP
Trigger: TGGACTCCCCCAATGGCAGCAGCTCGCTGTCCCCCG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACGGGGGACAGCGAGCTaGTGCCATTGGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQRGTAS*CHWGSP
Trigger: TGGACTCCCCCAATGGCAGCAGCTCGCTGTCCCCCG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGGGGTGGGCGCAGCTaGAGGAGCTCTTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGGGRS*RSSCCS
Trigger: CGAGCAGCAAGAGCTCCTGCAGCTGCGCCCACCCCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCTCCCCCTCGGCCTTaGCACCAGCTGCGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLSPPRP*HQLRQQ
Trigger: TTGCTGGCGCAGCTGGTGGCAAGGCCGAGGGGGAGA...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAGCAGGGAGGGCAGATaGCACCCCACCCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHSREGR*HPTHPL
Trigger: GAGGGGGTGGGTGGGGTGGCATCTGCCCTCCCTGCT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCAGCTGCCAGAGGACCTaGAGGGCCACTAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQASCQRT*RATKDP
Trigger: GGGGTCCTTAGTGGCCCTGCAGGTCCTCTGGCAGCT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGGGGTCAGCAGAGCTaGCAGAGGACCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLWGQQS*QRTCRA
Trigger: GGCCCTGCAGGTCCTCTGGCAGCTCTGCTGACCCCA...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTCGTCGGCCTTCCAGTaGCCTGTTCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQASSAFQ*PVPPLC
Trigger: GCAGAGCGGAGGAACAGGGCACTGGAAGGCCGACGA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCGAGGCACTGGGCACTaGAGGCAGGTCCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSRGTGH*RQVPVA
Trigger: GGCAACGGGGACCTGCCTCCAGTGCCCAGTGCCTCG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGAAGTCCGAGGCACTaGGCACTGGAGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGSPRH*ALEAGP
Trigger: GGGACCTGCCTCCAGTGCCCAGTGCCTCGGACTTCC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGACACACCAGCTGCTTaGGCAGGGGCAGGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQDTPAA*AGAGLA
Trigger: CGCCAGACCTGCCCCTGCCCAAGCAGCTGGTGTGTC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGCGCAGCCCTCCCAGTaGCAGCAGTACCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHAQPSQ*QQYPAS
Trigger: GGATGCGGGGTACTGCTGCCACTGGGAGGGCTGCGC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGCGCAGCCCTCCCAGTaGCAGCAGTACCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSAQPSQ*QQYPAS
Trigger: GGATGCGGGGTACTGCTGCCACTGGGAGGGCTGCGC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGTCCAGCACGGTGCCTaGCAGCAGGGGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQVQHGA*QQGESI
Trigger: GATGGACTCCCCCTGCTGCCAGGCACCGTGCTGGAC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCACCCACCCCCTCTGCTaGGAGAGGGCAACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSTHPLC*ERATCH
Trigger: ATGGCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCAGGCCTCTGGTCCCTaGGGGCTCCTCTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLQASGP*GLLSGR
Trigger: CCTTCCTGAGAGGAGCCCCCAGGGACCAGAGGCCTG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGGAAGGGCAGGCCTCTaGTCCCTGGGGGCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDGRAGL*SLGAPL
Trigger: GAGAGGAGCCCCCAGGGACCAGAGGCCTGCCCTTCC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACCCCAGGGCAGGGGCTaGGTAAGCCTAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQPQGRG*VSLGGK
Trigger: CTTCCCTCCTAGGCTTACCCAGCCCCTGCCCTGGGG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCTGGTACTGCAGGCCTaGCCTGGGGTGAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSLVLQA*PGVRTA
Trigger: CGCCGTCCTCACCCCAGGCCAGGCCTGCAGTACCAG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGCCAGCTATCCCGTCTaGTACTGCAGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAASYPV*YCRPGL
Trigger: CAGGCCAGGCCTGCAGTACCAGACGGGATAGCTGGC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGGAAGACGGGGCGCTaGGCCTGGCCCCACATGCTC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDRKTGR*AWPHML
Trigger: GAGCATGTGGGGCCAGGCCCAGCGCCCCGTCTTCCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAGGAAGACGGGGCGCTaGGCCTGGCCCCACATGCTC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHRKTGR*AWPHML
Trigger: GAGCATGTGGGGCCAGGCCCAGCGCCCCGTCTTCCT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCAACACAGCACTGACTaGGAGCCCCCTCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSQHSTD*EPPPLH
Trigger: ATGCAGGGGAGGGGGCTCCCAGTCAGTGCTGTGTTG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGGGGCAGAGCCAGTGTaGCTGGGCCCTGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCGAEPV*LGPVRA
Trigger: AGCCCTGACAGGGCCCAGCCACACTGGCTCTGCCCC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGGGCAGAGCCAGTGTaGCTGGGCCCTGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGAEPV*LGPVRA
Trigger: AGCCCTGACAGGGCCCAGCCACACTGGCTCTGCCCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCGGCCCTGCCGAGCCTaGTCCGTCACCGAGTCGCAT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHRPCRA*SVTESH
Trigger: ATGCGACTCGGTGACGGACCAGGCTCGGCAGGGCCG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGTTCAGCAGGAAGCCTaGGGGCGGGGAGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCVQQEA*GRGAWR
Trigger: TCTCCAGGCTCCCCGCCCTCAGGCTTCCTGCTGAAC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCACGAGAGGGGCTGCTaGAAAGCGTCCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAHERGC*KASLHL
Trigger: AAGGTGGAGGGACGCTTTTCAGCAGCCCCTCTCGTG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCATGGTGGTGACAGGCTaGGGTCCACGAGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLMVVTG*GPREGL
Trigger: CAGCCCCTCTCGTGGACCTCAGCCTGTCACCACCAT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAATGGTGGTGACAGGCTaGGGTCCACGAGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQMVVTG*GPREGL
Trigger: CAGCCCCTCTCGTGGACCTCAGCCTGTCACCACCAT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACAGCCCAGATGGTGGTaGCAGGCTGAGGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQQPRWW*QAEVHE
Trigger: CTCGTGGACCTCAGCCTGTCACCACCATCTGGGCTG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTCTTGTACCTGGCGTTaGAACCTCGGCCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQASCTWR*NLGHGG
Trigger: CCCGCCATGGCCGAGGTTTCAACGCCAGGTACAAGA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCAGTGGCCATGGGCCTTaGTGTGCTTGCGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQASGHGP*CACAVS
Trigger: GCTCACTGCGCAAGCACATCAAGGCCCATGGCCACT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCACAGGCCAGGGCACTaGGGTCAAGGGGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNHRPGH*GQGGRG
Trigger: CCCCCGGCCCCCTTGACCTCAGTGCCCTGGCCTGTG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATGCTGGCAGCTGAGTTaGCGCCCGTGGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQCWQLS*RPWTGP
Trigger: TGGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTACAGCTCTCCCTGCATaGCAGGCCAGGTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSTALPA*QARSPP
Trigger: GGGTGGGGACCTGGCCTGTCATGCAGGGAGAGCTGT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTTGGGTGGTCACTAGGTaGGGGAGGTGCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSWVVTR*GRCQGG
Trigger: CCCACCCTGGCACCTCCCTCACCTAGTGACCACCCA...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTGGGTGGTCACTAGGTaGGGGAGGTGCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCWVVTR*GRCQGG
Trigger: CCCACCCTGGCACCTCCCTCACCTAGTGACCACCCA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCTCCCAACACAGCACTaGCTGGGAGCCCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDLPTQH*LGAPSP
Trigger: AGGGGAGGGGGCTCCCAGTCAGTGCTGTGTTGGGAG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGTGGGGAAGTGCCTCTaGGAAAGCGGCCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDVGKCL*ESGPAG
Trigger: CCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCAC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGGCCAGGGCAGCGAGTaGAGTGAGCGGATACACGCG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCGQGSE*SERIHA
Trigger: CGCGTGTATCCGCTCACTGCACTCGCTGCCCTGGCC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGGGACAGCGAGCTGCTaGCATTGGGGGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDGTASC*HWGSPA
Trigger: GGCTGGACTCCCCCAATGGCAGCAGCTCGCTGTCCC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCGGGGGACAGCGAGCTaGTGCCATTGGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSRGTAS*CHWGSP
Trigger: TGGACTCCCCCAATGGCAGCAGCTCGCTGTCCCCCG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCAGCGACACACCAGCTaGTTGGGCAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLQRHTS*LGRGRS
Trigger: AGACCTGCCCCTGCCCAAGCAGCTGGTGTGTCGCTG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGCCTTGCCACCAGCTaGGCCAGCAAGGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGLATS*ASKEGD
Trigger: GTCTCCCTCCTTGCTGGCGCAGCTGGTGGCAAGGCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGGCCTTGCCACCAGCTaGGCCAGCAAGGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCGLATS*ASKEGD
Trigger: GTCTCCCTCCTTGCTGGCGCAGCTGGTGGCAAGGCC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTCTCCCCCTCGGCCTTaGCACCAGCTGCGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCSPPRP*HQLRQQ
Trigger: TTGCTGGCGCAGCTGGTGGCAAGGCCGAGGGGGAGA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTCTCCCCCTCGGCCTTaGCACCAGCTGCGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDSPPRP*HQLRQQ
Trigger: TTGCTGGCGCAGCTGGTGGCAAGGCCGAGGGGGAGA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGAGCACAGCTCTCCCTaGATGACAGGCCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLEHSSP*MTGQVP
Trigger: GGGGACCTGGCCTGTCATGCAGGGAGAGCTGTGCTC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCCCACCCACCCCCTCTaGTGGGAGAGGGCAACTTGC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHPTHPL*WERATC
Trigger: GCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGTGGG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCCCACCCACCCCCTCTaGTGGGAGAGGGCAACTTGC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSPTHPL*WERATC
Trigger: GCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGTGGG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGCCTGCATCTGTCTTaGTTTCCCTCTGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGLHLS*FPSGGR
Trigger: CCTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGGGAGCCCCCTCCCCTaGATGCTGTCACTTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDGSPLP*MLSLGA
Trigger: GGCTCCAAGTGACAGCATGCAGGGGAGGGGGCTCCC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCAGTGGTTCTGGCCCCTaGCAGGGTCCCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLSGSGP*QGPSEW
Trigger: CCACTCAGAGGGACCCTGGCAGGGGCCAGAACCACT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTGGGGTCAGCAGAGCTaGCAGAGGACCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDWGQQS*QRTCRA
Trigger: GGCCCTGCAGGTCCTCTGGCAGCTCTGCTGACCCCA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCAAAGTACACCGGCCCTaGCGAGCCTGGTCCGTCACC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLKVHRP*RAWSVT
Trigger: GGTGACGGACCAGGCTCGGCAGGGCCGGTGTACTTT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCCGCTCCGCCACATCTaGAGCTCGGGCAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDPLRHI*SSGREG
Trigger: ACCTTCCCTGCCCGAGCTGCAGATGTGGCGGAGCGG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433375.2
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGCGAGCTGCTGCCATTaGGGGAGTCCAGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQASCCH*GSPAQM
Trigger: CATCTGGGCTGGACTCCCCCAATGGCAGCAGCTCGC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGAAGTCCGAGGCACTaGGCACTGGAGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGSPRH*ALEAGP
Trigger: GGGACCTGCCTCCAGTGCCCAGTGCCTCGGACTTCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGACACACCAGCTGCTTaGGCAGGGGCAGGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCDTPAA*AGAGLA
Trigger: CGCCAGACCTGCCCCTGCCCAAGCAGCTGGTGTGTC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTTGAAACCTCGGCCATaGCGGGCGCAGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDLKPRP*RAQPSQ
Trigger: CTGGGAGGGCTGCGCCCGCCATGGCCGAGGTTTCAA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAGGCAGGACGGGGCCTaGCAGCCCAGGGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNRQDGA*QPRAHA
Trigger: GGCATGGGCCCTGGGCTGCCAGGCCCCGTCCTGCCT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACTGCCCAGGGCCCTGGTaGGCACCGACCCACGCCCCT +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNCPGPW*APTHAP
Trigger: AGGGGCGTGGGTCGGTGCCCACCAGGGCCCTGGGCA...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCCATGCCCAGGGCCCTaGTGGGCACCGACCCACGCC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNPCPGP*WAPTHA
Trigger: GGCGTGGGTCGGTGCCCACCAGGGCCCTGGGCATGG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGAGTCCATCGGGGCTTaGCCGGGAGCAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHESIGA*PGAAAL
Trigger: GAGAGCAGCTGCTCCCGGCCAAGCCCCGATGGACTC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGTCCAGCACGGTGCCTaGCAGCAGGGGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHVQHGA*QQGESI
Trigger: GATGGACTCCCCCTGCTGCCAGGCACCGTGCTGGAC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGTCCAGCACGGTGCCTaGCAGCAGGGGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDVQHGA*QQGESI
Trigger: GATGGACTCCCCCTGCTGCCAGGCACCGTGCTGGAC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCAACTGTCCGCAGGATaGGCTCAGTTCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSQLSAG*AQFTTA
Trigger: GGCTGTGGTGAACTGAGCCCATCCTGCGGACAGTTG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCAGGCCTCTGGTCCCTaGGGGCTCCTCTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDQASGP*GLLSGR
Trigger: CCTTCCTGAGAGGAGCCCCCAGGGACCAGAGGCCTG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCAGGCCTCTGGTCCCTaGGGGCTCCTCTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSQASGP*GLLSGR
Trigger: CCTTCCTGAGAGGAGCCCCCAGGGACCAGAGGCCTG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCCCCAGGGCAGGGGCTaGGTAAGCCTAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHPQGRG*VSLGGK
Trigger: CTTCCCTCCTAGGCTTACCCAGCCCCTGCCCTGGGG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCCCCAGGGCAGGGGCTaGGTAAGCCTAGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSPQGRG*VSLGGK
Trigger: CTTCCCTCCTAGGCTTACCCAGCCCCTGCCCTGGGG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGAGGCGCCTTGTCCTaGGGGGCATGCTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGGALS*GACFYL
Trigger: CAGGTAGAAGCATGCCCCCCAGGACAAGGCGCCTCC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCCTGGGGTGCAGGGGTaGAGTGGCCAGCTATCCCGT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHPGVQG*SGQLSR
Trigger: ACGGGATAGCTGGCCACTCCACCCCTGCACCCCAGG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGTCACTCAGTATCTTaGCACCACAGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGHSVS*HHSWPG
Trigger: GCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGTCCTGGGATGGGACTaGGGCACAAGGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDVLGWD*GTRPSS
Trigger: GCTGGAGGGCCTTGTGCCCCAGTCCCATCCCAGGAC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGTCCTGGGATGGGACTaGGGCACAAGGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCVLGWD*GTRPSS
Trigger: GCTGGAGGGCCTTGTGCCCCAGTCCCATCCCAGGAC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGGCCCTGTCAGGGCTaGAGTCCAAAGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGPCQG*SPKPSG
Trigger: GCCACTGGGCTTTGGACTCCAGCCCTGACAGGGCCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCAGTGGGCTCCCAGCTaGTCTTCACGCAGGAACCTC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAQWAPS*SSRRNL
Trigger: GAGGTTCCTGCGTGAAGACCAGCTGGGAGCCCACTG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433375.2
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACCGCCCGGAGCTTGGTaGTACTCAGCTTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQPPGAW*YSASGR
Trigger: TCGACCTGAAGCTGAGTATCACCAAGCTCCGGGCGG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTATGGTGGTGACAGGCTaGGGTCCACGAGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSMVVTG*GPREGL
Trigger: CAGCCCCTCTCGTGGACCTCAGCCTGTCACCACCAT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCAGCCCAGATGGTGGTaGCAGGCTGAGGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDQPRWW*QAEVHE
Trigger: CTCGTGGACCTCAGCCTGTCACCACCATCTGGGCTG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCAGCCCAGATGGTGGTaGCAGGCTGAGGTCCACGAG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHQPRWW*QAEVHE
Trigger: CTCGTGGACCTCAGCCTGTCACCACCATCTGGGCTG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATCTTGTACCTGGCGTTaGAACCTCGGCCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQSCTWR*NLGHGG
Trigger: CCCGCCATGGCCGAGGTTTCAACGCCAGGTACAAGA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGTGTGCGGATGTGGATaGGCATCTTGTACCTGGCGT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSVCGCG*ASCTWR
Trigger: ACGCCAGGTACAAGATGCTCATCCACATCCGCACAC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGATGTGCTTGCGCAGTaGGCTGGGGTCCGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDDVLAQ*AGVRVA
Trigger: CGCTACACGGACCCCAGCTCACTGCGCAAGCACATC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGATGTGCTTGCGCAGTaGGCTGGGGTCCGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSDVLAQ*AGVRVA
Trigger: CGCTACACGGACCCCAGCTCACTGCGCAAGCACATC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAAGTGGCCATGGGCCTTaGTGTGCTTGCGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQSGHGP*CACAVS
Trigger: GCTCACTGCGCAAGCACATCAAGGCCCATGGCCACT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTGCTGGCAGCTGAGTTaGCGCCCGTGGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDCWQLS*RPWTGP
Trigger: TGGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTGCTGGCAGCTGAGTTaGCGCCCGTGGACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCCWQLS*RPWTGP
Trigger: TGGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCAAGTCGCAAACCCATaGCCCCGCCAGGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAQVANP*PRQGLK
Trigger: CTTAAGTCCCTGGCGGGGTCATGGGTTTGCGACTTG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCACCGAGTCGCATGCTaGGCTCGTCGGCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSHRVAC*ARRPSS
Trigger: ACTGGAAGGCCGACGAGCTCAGCATGCGACTCGGTG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCACCGAGTCGCATGCTaGGCTCGTCGGCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHHRVAC*ARRPSS
Trigger: ACTGGAAGGCCGACGAGCTCAGCATGCGACTCGGTG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCCCGAAGCTCCTCTGTaGTGGAAGCCTTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSPEAPL*WKPWPG
Trigger: GCCTGGCCAAGGCTTCCAGCACAGAGGAGCTTCGGG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCTCCCGCTTCTCTCTTaGCGCCCGGAGCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLLPLLS*RPELGD
Trigger: ATCACCAAGCTCCGGGCGGCAAGAGAGAAGCGGGAG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAGGCCCAGCTCCCTGTaGAGAGCACGGGGCCGGACC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNRPSSL*RARGRT
Trigger: GGTCCGGCCCCGTGCTCTGCACAGGGAGCTGGGCCT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGAGGCAGGTCCCCGTTaGCCTGGCGCTCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNEAGPR*PGARGT
Trigger: TGTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCAGCGACACACCAGCTaGTTGGGCAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDQRHTS*LGRGRS
Trigger: AGACCTGCCCCTGCCCAAGCAGCTGGTGTGTCGCTG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCAGCGACACACCAGCTaGTTGGGCAGGGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHQRHTS*LGRGRS
Trigger: AGACCTGCCCCTGCCCAAGCAGCTGGTGTGTCGCTG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGGCGGGAGAAGCTCTTaGTGCAGGTCGGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCGGRSS*CRSDSG
Trigger: ACCGCTGTCCGACCTGCAGCAAGAGCTTCTCCCGCC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGGCGGGAGAAGCTCTTaGTGCAGGTCGGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSGGRSS*CRSDSG
Trigger: ACCGCTGTCCGACCTGCAGCAAGAGCTTCTCCCGCC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATTGGCCGGGAGCAGCTaGTCTCCGTCCTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQLAGSS*SPSFQG
Trigger: CCCTTGAAAGGACGGAGAGCAGCTGCTCCCGGCCAA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTTGGCCGGGAGCAGCTaGTCTCCGTCCTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLLAGSS*SPSFQG
Trigger: CCCTTGAAAGGACGGAGAGCAGCTGCTCCCGGCCAA...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCTTCTACCTGGGGCTTTaGAGGGGCCTGCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSFYLGL*RGLHLS
Trigger: AGACAGATGCAGGCCCCTGCAAAGCCCCAGGTAGAA...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCCTGGCACCTCCCCTTaGCAGCTCAGGGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNPGTSP*QLRGPR
Trigger: CCGAGGGCCCCTGAGCTGGCAAGGGGAGGTGCCAGG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGCTGCCAGAGGACCTaGAGGGCCACTAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDSCQRT*RATKDP
Trigger: GGGGTCCTTAGTGGCCCTGCAGGTCCTCTGGCAGCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTTCGTCGGCCTTCCAGTaGCCTGTTCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSSSAFQ*PVPPLC
Trigger: GCAGAGCGGAGGAACAGGGCACTGGAAGGCCGACGA...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGTCTAGATCCCTCCTaGACATCAGCACCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGLDPS*TSAPCA
Trigger: CGCGCAGGGTGCTGATGTCCAGGAGGGATCTAGACC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGAAGCTCCTCTGTGCTaGAAGCCTTGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHEAPLC*KPWPGP
Trigger: GGGGCCTGGCCAAGGCTTCCAGCACAGAGGAGCTTC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGAAGCTCCTCTGTGCTaGAAGCCTTGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDEAPLC*KPWPGP
Trigger: GGGGCCTGGCCAAGGCTTCCAGCACAGAGGAGCTTC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCAGTGGGCTCCCAGCTaGTCTTCACGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLQWAPS*SSRRNL
Trigger: CAGGTTCCTGCGTGAAGACCAGCTGGGAGCCCACTG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGCGAGCTGCTGCCATTaGGGGAGTCCAGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDASCCH*GSPAQM
Trigger: CATCTGGGCTGGACTCCCCCAATGGCAGCAGCTCGC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGCGAGCTGCTGCCATTaGGGGAGTCCAGCCCAGATG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHASCCH*GSPAQM
Trigger: CATCTGGGCTGGACTCCCCCAATGGCAGCAGCTCGC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGGGCAGGGGCAGGTCTaGCGAGAGGCACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDGQGQV*REALVL
Trigger: AAGGACAAGTGCCTCTCGCCAGACCTGCCCCTGCCC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGGGCAGGGGCAGGTCTaGCGAGAGGCACTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSGQGQV*REALVL
Trigger: AAGGACAAGTGCCTCTCGCCAGACCTGCCCCTGCCC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGACACAAAGTGGCCATaGGCCTTGATGTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSDTKWP*ALMCLR
Trigger: GCGCAAGCACATCAAGGCCCATGGCCACTTTGTGTC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCACCCACCCCCTCTGCTaGGAGAGGGCAACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLTHPLC*ERATCH
Trigger: ATGGCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGGAGGCGCCTTGTCCTaGGGGGCATGCTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSGGALS*GACFYL
Trigger: CAGGTAGAAGCATGCCCCCCAGGACAAGGCGCCTCC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGCCAGCTATCCCGTCTaGTACTGCAGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCASYPV*YCRPGL
Trigger: CAGGCCAGGCCTGCAGTACCAGACGGGATAGCTGGC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCAACACAGCACTGACTaGGAGCCCCCTCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLQHSTD*EPPPLH
Trigger: ATGCAGGGGAGGGGGCTCCCAGTCAGTGCTGTGTTG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCACCCTTAAGTGGTTCTaGCCCCTGCCAGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLTLKWF*PLPGSL
Trigger: GAGGGACCCTGGCAGGGGCCAGAACCACTTAAGGGT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTCCCTCAGGGCGTCCTaGGATGGGACTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCSLRAS*DGTGAQ
Trigger: TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACTCCCTCAGGGCGTCCTaGGATGGGACTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHSLRAS*DGTGAQ
Trigger: TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGA...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTTCCCTCAGGGCGTCCTaGGATGGGACTGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSSLRAS*DGTGAQ
Trigger: TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGA...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGCCTCGTTTTACAGATaGGGAGGTGGAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAASFYR*GGGRAW
Trigger: CCAGGCCCTTCCACCTCCCCATCTGTAAAACGAGGC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCCGCCCGGAGCTTGGTaGTACTCAGCTTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDPPGAW*YSASGR
Trigger: TCGACCTGAAGCTGAGTATCACCAAGCTCCGGGCGG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCCGCCCGGAGCTTGGTaGTACTCAGCTTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSPPGAW*YSASGR
Trigger: TCGACCTGAAGCTGAGTATCACCAAGCTCCGGGCGG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCACGAGAGGGGCTGCTaGAAAGCGTCCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSHERGC*KASLHL
Trigger: AAGGTGGAGGGACGCTTTTCAGCAGCCCCTCTCGTG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACTCTTGTACCTGGCGTTaGAACCTCGGCCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHSCTWR*NLGHGG
Trigger: CCCGCCATGGCCGAGGTTTCAACGCCAGGTACAAGA...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAGTGGCCATGGGCCTTaGTGTGCTTGCGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCSGHGP*CACAVS
Trigger: GCTCACTGCGCAAGCACATCAAGGCCCATGGCCACT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCCGAGCCCGGCGGGATaGCCACCCAGCCAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELPSPAG*PPSQGP
Trigger: TGGCCCCTGGCTGGGTGGTCATCCCGCCGGGCTCGG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTTTGGGCTAATCCCGTaGCCCCCGCCCTGTTATCTT +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAFGLIP*PPPCYL
Trigger: AAGATAACAGGGCGGGGGGCACGGGATTAGCCCAAA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCTCCCGCTTCTCTCTTaGCGCCCGGAGCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCLPLLS*RPELGD
Trigger: ATCACCAAGCTCCGGGCGGCAAGAGAGAAGCGGGAG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGGAGAAGCTCTTGCTaGAGGTCGGACAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGRSSC*RSDSGV
Trigger: CACACCGCTGTCCGACCTGCAGCAAGAGCTTCTCCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGGGAGAAGCTCTTGCTaGAGGTCGGACAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDGRSSC*RSDSGV
Trigger: CACACCGCTGTCCGACCTGCAGCAAGAGCTTCTCCC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGCTTCTCACCTGTGTaGGACCGGTTGTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGFSPV*DRLWIF
Trigger: GAAGATCCACAACCGGTCGCACACAGGTGAGAAGCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTGCAGGAGCTCTTGCTaGTCGTGGGACACAAAGTGG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQACRSSC*SWDTKW
Trigger: CCACTTTGTGTCCCACGAGCAGCAAGAGCTCCTGCA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTTGGCCGGGAGCAGCTaGTCTCCGTCCTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDLAGSS*SPSFQG
Trigger: CCCTTGAAAGGACGGAGAGCAGCTGCTCCCGGCCAA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGGCCTGCATCTGTCTTaGTTTCCCTCTGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLGLHLS*FPSGGR
Trigger: CCTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTTCTACCTGGGGCTTTaGAGGGGCCTGCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAFYLGL*RGLHLS
Trigger: AGACAGATGCAGGCCCCTGCAAAGCCCCAGGTAGAA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAGGGGCCCTCGGACCTaGTTCCCACGCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNRGPRT*FPRSQG
Trigger: ACCCTGGGAGCGTGGGAAGCAGGTCCGAGGGCCCCT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGGTCTAGATCCCTCCTaGACATCAGCACCCTGCGCG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCGLDPS*TSAPCA
Trigger: CGCGCAGGGTGCTGATGTCCAGGAGGGATCTAGACC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCATCCGAGCTTCCGCTTaGTTCCTAGCTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAIRASA*FLAWSQ
Trigger: CTGGGACCAAGCTAGGAACCAAGCGGAAGCTCGGAT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCAGTGGGCTCCCAGCTaGTCTTCACGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDQWAPS*SSRRNL
Trigger: CAGGTTCCTGCGTGAAGACCAGCTGGGAGCCCACTG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCCTTCTCGGGGAACTTaGAGTTCAGCAGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAPSRGT*SSAGSL
Trigger: CAGGCTTCCTGCTGAACTCCAAGTTCCCCGAGAAGG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCATCCAAATAGCGCAGTaGCTGGAAGTCCGAGGCACT +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSIQIAQ*LEVRGT
Trigger: AGTGCCTCGGACTTCCAGCCACTGCGCTATTTGGAT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCAGAGCTGGTTACACTTaGCCCAGCGACACACCAGCT +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQARAGYT*PSDTPA
Trigger: AGCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGTCGGACAGCGGTGTaGCTTCTCGTTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGRTAV*LLVGVC
Trigger: ACACACACCAACGAGAAGCCACACCGCTGTCCGACC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGGTCGGACAGCGGTGTaGCTTCTCGTTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLGRTAV*LLVGVC
Trigger: ACACACACCAACGAGAAGCCACACCGCTGTCCGACC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGTGTGCGACCGGTTGTaGATCTTCAGGTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAVCDRL*IFRFSR
Trigger: CCTGGAGAACCTGAAGATCCACAACCGGTCGCACAC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCAACTGTCCGCAGGATaGGCTCAGTTCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLQLSAG*AQFTTA
Trigger: GGCTGTGGTGAACTGAGCCCATCCTGCGGACAGTTG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACAACTGTCCGCAGGATaGGCTCAGTTCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQQLSAG*AQFTTA
Trigger: GGCTGTGGTGAACTGAGCCCATCCTGCGGACAGTTG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCACCCACCCCCTCTGCTaGGAGAGGGCAACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCTHPLC*ERATCH
Trigger: ATGGCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTACCCACCCCCTCTGCTaGGAGAGGGCAACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSTHPLC*ERATCH
Trigger: ATGGCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCTGCATGCTGTCACTTaGAGCCCCCAGACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDLHAVT*SPQTRS
Trigger: GCTCCTGGTCTGGGGGCTCCAAGTGACAGCATGCAG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCAACACAGCACTGACTaGGAGCCCCCTCCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHQHSTD*EPPPLH
Trigger: ATGCAGGGGAGGGGGCTCCCAGTCAGTGCTGTGTTG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACACCCTTAAGTGGTTCTaGCCCCTGCCAGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHTLKWF*PLPGSL
Trigger: GAGGGACCCTGGCAGGGGCCAGAACCACTTAAGGGT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGCACCACCCTTAAGTaGTTCTGGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDSTTLK*FWPLPG
Trigger: CCCTGGCAGGGGCCAGAACCACTTAAGGGTGGTGCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTAGCACCACCCTTAAGTaGTTCTGGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSSTTLK*FWPLPG
Trigger: CCCTGGCAGGGGCCAGAACCACTTAAGGGTGGTGCT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAGCACCACCCTTAAGTaGTTCTGGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCSTTLK*FWPLPG
Trigger: CCCTGGCAGGGGCCAGAACCACTTAAGGGTGGTGCT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGCCTCGTTTTACAGATaGGGAGGTGGAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQASFYR*GGGRAW
Trigger: CCAGGCCCTTCCACCTCCCCATCTGTAAAACGAGGC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCGGCCCTGCCGAGCCTaGTCCGTCACCGAGTCGCAT +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNRPCRA*SVTESH
Trigger: ATGCGACTCGGTGACGGACCAGGCTCGGCAGGGCCG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACTGGGCTGCTGGCAGCTaGGTTGACGCCCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNWAAGS*VDARGQ
Trigger: CTGTCCACGGGCGTCAACTCAGCTGCCAGCAGCCCA...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGAGGCCAGCCATGAATaGCCTAGCACCATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQEASHE*PSTILA
Trigger: AGCAAGGATGGTGCTAGGTCATTCATGGCTGGCCTC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCAAGTCGCAAACCCATaGCCCCGCCAGGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHQVANP*PRQGLK
Trigger: CTTAAGTCCCTGGCGGGGTCATGGGTTTGCGACTTG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCAAGTCGCAAACCCATaGCCCCGCCAGGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCQVANP*PRQGLK
Trigger: CTTAAGTCCCTGGCGGGGTCATGGGTTTGCGACTTG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGCCCAGCTGTTTTCTaGCTCGTGTTGAACCACAGA +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGPAVF*LVLNHR
Trigger: TCTGTGGTTCAACACGAGGCAGAAAACAGCTGGGCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCGGGGGACAGCGAGCTaGTGCCATTGGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNRGTAS*CHWGSP
Trigger: TGGACTCCCCCAATGGCAGCAGCTCGCTGTCCCCCG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATGGAATAGCGCTTGTTaGAGCCCTCGTAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQWNSAC*SPRRGR
Trigger: TCTGCCCCTACGAGGGCTGCAACAAGCGCTATTCCA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATGCAGGAGCTCTTGCTaGTCGTGGGACACAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQCRSSC*SWDTKW
Trigger: CCACTTTGTGTCCCACGAGCAGCAAGAGCTCCTGCA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAAGCTGCAGGAGCTCTTaGTGCTCGTGGGACACAAAG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQSCRSS*CSWDTK
Trigger: CTTTGTGTCCCACGAGCAGCAAGAGCTCCTGCAGCT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACTCTCCCCCTCGGCCTTaGCACCAGCTGCGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNSPPRP*HQLRQQ
Trigger: TTGCTGGCGCAGCTGGTGGCAAGGCCGAGGGGGAGA...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATGGGAGAGGGCAACTTaGCATGGGTGGTCACTAGGT +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQWERAT*HGWSLG
Trigger: ACCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGGCCTGCATCTGTCTTaGTTTCCCTCTGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSGLHLS*FPSGGR
Trigger: CCTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGCCTGCATCTGTCTTaGTTTCCCTCTGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGLHLS*FPSGGR
Trigger: CCTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATTCTACCTGGGGCTTTaGAGGGGCCTGCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQFYLGL*RGLHLS
Trigger: AGACAGATGCAGGCCCCTGCAAAGCCCCAGGTAGAA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACTGGGGTCAGCAGAGCTaGCAGAGGACCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNWGQQS*QRTCRA
Trigger: GGCCCTGCAGGTCCTCTGGCAGCTCTGCTGACCCCA...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACCTGTTCCTCCGCTCTaGTCAAGTCGCAAACCCATG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQPVPPL*SSRKPM
Trigger: CATGGGTTTGCGACTTGAGCAGAGCGGAGGAACAGG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGGAAGTCCGAGGCACTaGGCACTGGAGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNGSPRH*ALEAGP
Trigger: GGGACCTGCCTCCAGTGCCCAGTGCCTCGGACTTCC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCAGAACTGGAAGGAGCTaGGGACACCATCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRTGRS*GHHPNS
Trigger: GCTATTTGGATGGTGTCCCCAGCTCCTTCCAGTTCT...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCAGAGCTGGTTACACTTaGCCCAGCGACACACCAGCT +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLRAGYT*PSDTPA
Trigger: AGCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGTGTGTGTGCGGATGTaGATGAGCATCTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSVCVRM*MSILYL
Trigger: CAGGTACAAGATGCTCATCCACATCCGCACACACAC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGTCGGACAGCGGTGTaGCTTCTCGTTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGRTAV*LLVGVC
Trigger: ACACACACCAACGAGAAGCCACACCGCTGTCCGACC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCAGCGGTCACTGGAGTTaGAATAGCGCTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQASGHWS*NSACCS
Trigger: GCTGCAACAAGCGCTATTCCAACTCCAGTGACCGCT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGACACAAAGTGGCCATaGGCCTTGATGTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQDTKWP*ALMCLR
Trigger: GCGCAAGCACATCAAGGCCCATGGCCACTTTGTGTC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATCGTGGGACACAAAGTaGCCATGGGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQSWDTK*PWALMC
Trigger: GCACATCAAGGCCCATGGCCACTTTGTGTCCCACGA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCGTGGGACACAAAGTaGCCATGGGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLSWDTK*PWALMC
Trigger: GCACATCAAGGCCCATGGCCACTTTGTGTCCCACGA...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCAACTGTCCGCAGGATaGGCTCAGTTCACCACAGCC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDQLSAG*AQFTTA
Trigger: GGCTGTGGTGAACTGAGCCCATCCTGCGGACAGTTG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGCAACTTGCCATGGGTaGTCACTAGGTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLATCHG*SLGEGG
Trigger: ACCTCCCTCACCTAGTGACCACCCATGGCAAGTTGC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGTCTTGCTTTCCCTCTaGAGGCAGGGTCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQVLLSL*RQGQRE
Trigger: TTCCCTCTGACCCTGCCTCCAGAGGGAAAGCAAGAC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCCTGGGGTGCAGGGGTaGAGTGGCCAGCTATCCCGT +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNPGVQG*SGQLSR
Trigger: ACGGGATAGCTGGCCACTCCACCCCTGCACCCCAGG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCTGTGTCCCAGCCTGTaGTCGGTCGTCCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNLCPSL*SVVPSQ
Trigger: CTGGCTGGGGACGACCGACCACAGGCTGGGACACAG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGAAGCAACGTGTCATaGGTCCAGCACCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGSNVS*VQHPPP
Trigger: TGGAGGAGGGTGCTGGACCCATGACACGTTGCTTCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGTCCTGGGATGGGACTaGGGCACAAGGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNVLGWD*GTRPSS
Trigger: GCTGGAGGGCCTTGTGCCCCAGTCCCATCCCAGGAC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGCCTCGTTTTACAGATaGGGAGGTGGAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHASFYR*GGGRAW
Trigger: CCAGGCCCTTCCACCTCCCCATCTGTAAAACGAGGC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGGGCCCTGTCAGGGCTaGAGTCCAAAGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNGPCQG*SPKPSG
Trigger: GCCACTGGGCTTTGGACTCCAGCCCTGACAGGGCCC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTTTTCTGCCTCGTGTTaGACCACAGACTCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAFSASC*TTDSRS
Trigger: AGAACGCGAGTCTGTGGTTCAACACGAGGCAGAAAA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR TCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGTGTGCGGATGTGGATaGGCATCTTGTACCTGGCGT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHVCGCG*ASCTWR
Trigger: ACGCCAGGTACAAGATGCTCATCCACATCCGCACAC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGATGTGCTTGCGCAGTaGGCTGGGGTCCGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNDVLAQ*AGVRVA
Trigger: CGCTACACGGACCCCAGCTCACTGCGCAAGCACATC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGAGGCCAGCCATGAATaGCCTAGCACCATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSEASHE*PSTILA
Trigger: AGCAAGGATGGTGCTAGGTCATTCATGGCTGGCCTC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTTTGGGCTAATCCCGTaGCCCCCGCCCTGTTATCTT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCFGLIP*PPPCYL
Trigger: AAGATAACAGGGCGGGGGGCACGGGATTAGCCCAAA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCGGCGGGCGACTCCCTaGCGTGCCCTCGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELRRATP*RALGLS
Trigger: ACTGAGACCGAGGGCACGGCAGGGAGTCGCCCGCCG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCCCGAAGCTCCTCTGTaGTGGAAGCCTTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNPEAPL*WKPWPG
Trigger: GCCTGGCCAAGGCTTCCAGCACAGAGGAGCTTCGGG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGAGGCCCAGCTCCCTGTaGAGAGCACGGGGCCGGACC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELRPSSL*RARGRT
Trigger: GGTCCGGCCCCGTGCTCTGCACAGGGAGCTGGGCCT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGGCTTCTCACCTGTGTaGGACCGGTTGTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDGFSPV*DRLWIF
Trigger: GAAGATCCACAACCGGTCGCACACAGGTGAGAAGCC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTTGGAATAGCGCTTGTTaGAGCCCTCGTAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSWNSAC*SPRRGR
Trigger: TCTGCCCCTACGAGGGCTGCAACAAGCGCTATTCCA...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTGGAATAGCGCTTGTTaGAGCCCTCGTAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCWNSAC*SPRRGR
Trigger: TCTGCCCCTACGAGGGCTGCAACAAGCGCTATTCCA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTGCAGGAGCTCTTGCTaGTCGTGGGACACAAAGTGG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCCRSSC*SWDTKW
Trigger: CCACTTTGTGTCCCACGAGCAGCAAGAGCTCCTGCA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAGCTGCAGGAGCTCTTaGTGCTCGTGGGACACAAAG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHSCRSS*CSWDTK
Trigger: CTTTGTGTCCCACGAGCAGCAAGAGCTCCTGCAGCT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAGCTGCAGGAGCTCTTaGTGCTCGTGGGACACAAAG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCSCRSS*CSWDTK
Trigger: CTTTGTGTCCCACGAGCAGCAAGAGCTCCTGCAGCT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGAGCACAGCTCTCCCTaGATGACAGGCCAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNEHSSP*MTGQVP
Trigger: GGGGACCTGGCCTGTCATGCAGGGAGAGCTGTGCTC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACTGGGAGAGGGCAACTTaGCATGGGTGGTCACTAGGT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHWERAT*HGWSLG
Trigger: ACCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCA...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTTCTACCTGGGGCTTTaGAGGGGCCTGCATCTGTCT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCFYLGL*RGLHLS
Trigger: AGACAGATGCAGGCCCCTGCAAAGCCCCAGGTAGAA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCCTGGCACCTCCCCTTaGCAGCTCAGGGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELPGTSP*QLRGPR
Trigger: CCGAGGGCCCCTGAGCTGGCAAGGGGAGGTGCCAGG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAGCTGCCAGAGGACCTaGAGGGCCACTAAGGACCCC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNSCQRT*RATKDP
Trigger: GGGGTCCTTAGTGGCCCTGCAGGTCCTCTGGCAGCT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCCTGTTCCTCCGCTCTaGTCAAGTCGCAAACCCATG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDPVPPL*SSRKPM
Trigger: CATGGGTTTGCGACTTGAGCAGAGCGGAGGAACAGG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCCTGTTCCTCCGCTCTaGTCAAGTCGCAAACCCATG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSPVPPL*SSRKPM
Trigger: CATGGGTTTGCGACTTGAGCAGAGCGGAGGAACAGG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAAAGTACACCGGCCCTaGCGAGCCTGGTCCGTCACC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNKVHRP*RAWSVT
Trigger: GGTGACGGACCAGGCTCGGCAGGGCCGGTGTACTTT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACATCCGAGCTTCCGCTTaGTTCCTAGCTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHIRASA*FLAWSQ
Trigger: CTGGGACCAAGCTAGGAACCAAGCGGAAGCTCGGAT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCCTTCTCGGGGAACTTaGAGTTCAGCAGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSPSRGT*SSAGSL
Trigger: CAGGCTTCCTGCTGAACTCCAAGTTCCCCGAGAAGG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTAGAGCTGGTTACACTTaGCCCAGCGACACACCAGCT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSRAGYT*PSDTPA
Trigger: AGCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGAGCTGGTTACACTTaGCCCAGCGACACACCAGCT +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDRAGYT*PSDTPA
Trigger: AGCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAAGGAGCTCAAAGAGCTaGTTACACTTGGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQRSSKS*LHLAQR
Trigger: TCGCTGGGCCAAGTGTAACCAGCTCTTTGAGCTCCT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGTGTGCGACCGGTTGTaGATCTTCAGGTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCVCDRL*IFRFSR
Trigger: CCTGGAGAACCTGAAGATCCACAACCGGTCGCACAC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGTGTGCGACCGGTTGTaGATCTTCAGGTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDVCDRL*IFRFSR
Trigger: CCTGGAGAACCTGAAGATCCACAACCGGTCGCACAC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGACACAAAGTGGCCATaGGCCTTGATGTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHDTKWP*ALMCLR
Trigger: GCGCAAGCACATCAAGGCCCATGGCCACTTTGTGTC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACTCGTGGGACACAAAGTaGCCATGGGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHSWDTK*PWALMC
Trigger: GCACATCAAGGCCCATGGCCACTTTGTGTCCCACGA...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTTCGTGGGACACAAAGTaGCCATGGGCCTTGATGTGC +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSSWDTK*PWALMC
Trigger: GCACATCAAGGCCCATGGCCACTTTGTGTCCCACGA...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGCAACTTGCCATGGGTaGTCACTAGGTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDATCHG*SLGEGG
Trigger: ACCTCCCTCACCTAGTGACCACCCATGGCAAGTTGC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGCAACTTGCCATGGGTaGTCACTAGGTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCATCHG*SLGEGG
Trigger: ACCTCCCTCACCTAGTGACCACCCATGGCAAGTTGC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGCAACTTGCCATGGGTaGTCACTAGGTGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSATCHG*SLGEGG
Trigger: ACCTCCCTCACCTAGTGACCACCCATGGCAAGTTGC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGTCTTGCTTTCCCTCTaGAGGCAGGGTCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDVLLSL*RQGQRE
Trigger: TTCCCTCTGACCCTGCCTCCAGAGGGAAAGCAAGAC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGTCTTGCTTTCCCTCTaGAGGCAGGGTCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSVLLSL*RQGQRE
Trigger: TTCCCTCTGACCCTGCCTCCAGAGGGAAAGCAAGAC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGACTGCAGGCCTGGCCTaGGGTGAGGACGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELTAGLA*GEDGGC
Trigger: GCAGCCGCCGTCCTCACCCCAGGCCAGGCCTGCAGT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGCCAGCTATCCCGTCTaGTACTGCAGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNASYPV*YCRPGL
Trigger: CAGGCCAGGCCTGCAGTACCAGACGGGATAGCTGGC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCCTCTCTGCGGGCCCTaGTTTCTCCGCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELPLCGP*FLRPAQ
Trigger: CTGGGCTGGGCGGAGAAATCAGGGCCCGCAGAGAGG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR TCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCACGAGAGGGGCTGCTaGAAAGCGTCCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNHERGC*KASLHL
Trigger: AAGGTGGAGGGACGCTTTTCAGCAGCCCCTCTCGTG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAGTGGCCATGGGCCTTaGTGTGCTTGCGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNSGHGP*CACAVS
Trigger: GCTCACTGCGCAAGCACATCAAGGCCCATGGCCACT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGTCACCACAGCCGGTTTaGGCAGCACCGAGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELSPQPV*AAPSPA
Trigger: CGCCGGGCTCGGTGCTGCTCAAACCGGCTGTGGTGA...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGGCCCAGCTGTTTTCTaGCTCGTGTTGAACCACAGA +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCGPAVF*LVLNHR
Trigger: TCTGTGGTTCAACACGAGGCAGAAAACAGCTGGGCC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGGGGTGGGCGCAGCTaGAGGAGCTCTTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGGGRS*RSSCCS
Trigger: CGAGCAGCAAGAGCTCCTGCAGCTGCGCCCACCCCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACTTGGCCGGGAGCAGCTaGTCTCCGTCCTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNLAGSS*SPSFQG
Trigger: CCCTTGAAAGGACGGAGAGCAGCTGCTCCCGGCCAA...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGCTTGGTTCCTAGCTTaGTCCCAGCATTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHAWFLA*SQHLGP
Trigger: TGGTCCCAAATGCTGGGACCAAGCTAGGAACCAAGC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGCTTGGTTCCTAGCTTaGTCCCAGCATTTGGGACCA +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDAWFLA*SQHLGP
Trigger: TGGTCCCAAATGCTGGGACCAAGCTAGGAACCAAGC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGCCGGAGTTGGAGGTaGCAGCAGGCAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGRSWR*QQAVGS
Trigger: GGAGCCCACTGCCTGCTGCCACCTCCAACTCCGGCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCGAGGCACTGGGCACTaGAGGCAGGTCCCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELRGTGH*RQVPVA
Trigger: GGCAACGGGGACCTGCCTCCAGTGCCCAGTGCCTCG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAAGAACTGGAAGGAGCTaGGGACACCATCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQRTGRS*GHHPNS
Trigger: GCTATTTGGATGGTGTCCCCAGCTCCTTCCAGTTCT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAGGAGCTCAAAGAGCTaGTTACACTTGGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCRSSKS*LHLAQR
Trigger: TCGCTGGGCCAAGTGTAACCAGCTCTTTGAGCTCCT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGGAGCTCAAAGAGCTaGTTACACTTGGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDRSSKS*LHLAQR
Trigger: TCGCTGGGCCAAGTGTAACCAGCTCTTTGAGCTCCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGCGCAGCCCTCCCAGTaGCAGCAGTACCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELAQPSQ*QQYPAS
Trigger: GGATGCGGGGTACTGCTGCCACTGGGAGGGCTGCGC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGTGTGTGTGCGGATGTaGATGAGCATCTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQVCVRM*MSILYL
Trigger: CAGGTACAAGATGCTCATCCACATCCGCACACACAC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAGCGGTCACTGGAGTTaGAATAGCGCTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCSGHWS*NSACCS
Trigger: GCTGCAACAAGCGCTATTCCAACTCCAGTGACCGCT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGCGGTCACTGGAGTTaGAATAGCGCTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDSGHWS*NSACCS
Trigger: GCTGCAACAAGCGCTATTCCAACTCCAGTGACCGCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCTGGTACTGCAGGCCTaGCCTGGGGTGAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELLVLQA*PGVRTA
Trigger: CGCCGTCCTCACCCCAGGCCAGGCCTGCAGTACCAG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCTGCATGCTGTCACTTaGAGCCCCCAGACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNLHAVT*SPQTRS
Trigger: GCTCCTGGTCTGGGGGCTCCAAGTGACAGCATGCAG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAGCACCACCCTTAAGTaGTTCTGGCCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNSTTLK*FWPLPG
Trigger: CCCTGGCAGGGGCCAGAACCACTTAAGGGTGGTGCT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTTTTCTGCCTCGTGTTaGACCACAGACTCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCFSASC*TTDSRS
Trigger: AGAACGCGAGTCTGTGGTTCAACACGAGGCAGAAAA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGTTCAGCAGGAAGCCTaGGGGCGGGGAGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELVQQEA*GRGAWR
Trigger: TCTCCAGGCTCCCCGCCCTCAGGCTTCCTGCTGAAC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGTGGGTGGTCACTAGGTaGGGGAGGTGCCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELWVVTR*GRCQGG
Trigger: CCCACCCTGGCACCTCCCTCACCTAGTGACCACCCA...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCTCCCAACACAGCACTaGCTGGGAGCCCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELLPTQH*LGAPSP
Trigger: AGGGGAGGGGGCTCCCAGTCAGTGCTGTGTTGGGAG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGTGGGGAAGTGCCTCTaGGAAAGCGGCCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELVGKCL*ESGPAG
Trigger: CCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCAC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGCCCTGTTATCTTCTTaGTGCTCTGCTGTATGCTGG +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDALLSS*CSAVCW
Trigger: CCAGCATACAGCAGAGCAGCAAGAAGATAACAGGGC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGGACAGCGAGCTGCTaGCATTGGGGGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGTASC*HWGSPA
Trigger: GGCTGGACTCCCCCAATGGCAGCAGCTCGCTGTCCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCCCACCCACCCCCTCTaGTGGGAGAGGGCAACTTGC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELPTHPL*WERATC
Trigger: GCAAGTTGCCCTCTCCCAGCAGAGGGGGTGGGTGGG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAGAACTGGAAGGAGCTaGGGACACCATCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHRTGRS*GHHPNS
Trigger: GCTATTTGGATGGTGTCCCCAGCTCCTTCCAGTTCT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGACACACCAGCTGCTTaGGCAGGGGCAGGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELDTPAA*AGAGLA
Trigger: CGCCAGACCTGCCCCTGCCCAAGCAGCTGGTGTGTC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGTTGAAACCTCGGCCATaGCGGGCGCAGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELLKPRP*RAQPSQ
Trigger: CTGGGAGGGCTGCGCCCGCCATGGCCGAGGTTTCAA...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGTGTGTGTGCGGATGTaGATGAGCATCTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSVCVRM*MSILYL
Trigger: CAGGTACAAGATGCTCATCCACATCCGCACACACAC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCAGGCCTCTGGTCCCTaGGGGCTCCTCTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELQASGP*GLLSGR
Trigger: CCTTCCTGAGAGGAGCCCCCAGGGACCAGAGGCCTG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGGAAGCAACGTGTCATaGGTCCAGCACCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNGSNVS*VQHPPP
Trigger: TGGAGGAGGGTGCTGGACCCATGACACGTTGCTTCC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGTCCTGGGATGGGACTaGGGCACAAGGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELVLGWD*GTRPSS
Trigger: GCTGGAGGGCCTTGTGCCCCAGTCCCATCCCAGGAC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGGCCCTGTCAGGGCTaGAGTCCAAAGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGPCQG*SPKPSG
Trigger: GCCACTGGGCTTTGGACTCCAGCCCTGACAGGGCCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACACAGACTCGCGTTCTTaGGTGTGTTTTGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDTDSRS*VCFVWA
Trigger: AGCCCAAACAAAACACACTCAAGAACGCGAGTCTGT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCACCGAGTCGCATGCTaGGCTCGTCGGCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELHRVAC*ARRPSS
Trigger: ACTGGAAGGCCGACGAGCTCAGCATGCGACTCGGTG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGAAGGCGGCAGGAATaGCTCTCTGCGGGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGRRQE*LSAGPD
Trigger: ATCAGGGCCCGCAGAGAGGCATTCCTGCCGCCTTCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGCGGGAGAAGCTCTTaGTGCAGGTCGGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGGRSS*CRSDSG
Trigger: ACCGCTGTCCGACCTGCAGCAAGAGCTTCTCCCGCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGAGTGGTTCTGGCCCCTaGCAGGGTCCCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELSGSGP*QGPSEW
Trigger: CCACTCAGAGGGACCCTGGCAGGGGCCAGAACCACT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGTCGTCGGCCTTCCAGTaGCCTGTTCCTCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELSSAFQ*PVPPLC
Trigger: GCAGAGCGGAGGAACAGGGCACTGGAAGGCCGACGA...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGAAAGTACACCGGCCCTaGCGAGCCTGGTCCGTCACC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELKVHRP*RAWSVT
Trigger: GGTGACGGACCAGGCTCGGCAGGGCCGGTGTACTTT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCTTGGTCCCAGCATTTaGGACCACCTGCGTCCACTA +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNLGPSI*DHLRPL
Trigger: TAGTGGACGCAGGTGGTCCCAAATGCTGGGACCAAG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCCTTCTCGGGGAACTTaGAGTTCAGCAGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNPSRGT*SSAGSL
Trigger: CAGGCTTCCTGCTGAACTCCAAGTTCCCCGAGAAGG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGACACAAAGTGGCCATaGGCCTTGATGTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNDTKWP*ALMCLR
Trigger: GCGCAAGCACATCAAGGCCCATGGCCACTTTGTGTC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGAGGCGCCTTGTCCTaGGGGGCATGCTTCTACCTG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGGALS*GACFYL
Trigger: CAGGTAGAAGCATGCCCCCCAGGACAAGGCGCCTCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCCGCCCGGAGCTTGGTaGTACTCAGCTTCAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELPPGAW*YSASGR
Trigger: TCGACCTGAAGCTGAGTATCACCAAGCTCCGGGCGG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATGCTGCTCTGCTGTATaGTGGCAAATTGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQCCSAV*WQIVVQ
Trigger: TTGAACTACAATTTGCCAGCATACAGCAGAGCAGCA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAATCTTCTTGCTGCTCTaGTGTATGCTGGCAAATTGT +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQIFLLL*CMLANC
Trigger: ACAATTTGCCAGCATACAGCAGAGCAGCAAGAAGAT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGAACGACGAGGCCCGATaGCGAGCAATCCGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELNDEAR*RAIRAS
Trigger: GGAAGCTCGGATTGCTCGGCATCGGGCCTCGTCGTT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCTCCCGCTTCTCTCTTaGCGCCCGGAGCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELLPLLS*RPELGD
Trigger: ATCACCAAGCTCCGGGCGGCAAGAGAGAAGCGGGAG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGGAGAAGCTCTTGCTaGAGGTCGGACAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGRSSC*RSDSGV
Trigger: CACACCGCTGTCCGACCTGCAGCAAGAGCTTCTCCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACATCCAAATAGCGCAGTaGCTGGAAGTCCGAGGCACT +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNIQIAQ*LEVRGT
Trigger: AGTGCCTCGGACTTCCAGCCACTGCGCTATTTGGAT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAGCGGTCACTGGAGTTaGAATAGCGCTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNSGHWS*NSACCS
Trigger: GCTGCAACAAGCGCTATTCCAACTCCAGTGACCGCT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGACCCTTAAGTGGTTCTaGCCCCTGCCAGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELTLKWF*PLPGSL
Trigger: GAGGGACCCTGGCAGGGGCCAGAACCACTTAAGGGT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAAAAATACTGACGTCCTaGAATGTGCAACAACACACC +
Preference number: 4 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQKILTS*NVQQHT
Trigger: GGTGTGTTGTTGCACATTCCAGGACGTCAGTATTTT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCAAAATACTGACGTCCTaGAATGTGCAACAACACACC +
Preference number: 4 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLKILTS*NVQQHT
Trigger: GGTGTGTTGTTGCACATTCCAGGACGTCAGTATTTT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCAAGTCGCAAACCCATaGCCCCGCCAGGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELQVANP*PRQGLK
Trigger: CTTAAGTCCCTGGCGGGGTCATGGGTTTGCGACTTG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAACCTGTTAAAATACTaGCGTCCTGGAATGTGCAAC +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHNLLKY*RPGMCN
Trigger: GTTGCACATTCCAGGACGTCAGTATTTTAACAGGTT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCTGCTGCTCTGCTGTATaGTGGCAAATTGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCCCSAV*WQIVVQ
Trigger: TTGAACTACAATTTGCCAGCATACAGCAGAGCAGCA...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR GCA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACATCTTCTTGCTGCTCTaGTGTATGCTGGCAAATTGT +
Preference number: 4 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHIFLLL*CMLANC
Trigger: ACAATTTGCCAGCATACAGCAGAGCAGCAAGAAGAT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGTGTGTGTGCGGATGTaGATGAGCATCTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNVCVRM*MSILYL
Trigger: CAGGTACAAGATGCTCATCCACATCCGCACACACAC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGTCGGACAGCGGTGTaGCTTCTCGTTGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGRTAV*LLVGVC
Trigger: ACACACACCAACGAGAAGCCACACCGCTGTCCGACC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGTCACTCAGTATCTTaGCACCACAGCTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGHSVS*HHSWPG
Trigger: GCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGCCTCGTTTTACAGATaGGGAGGTGGAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELASFYR*GGGRAW
Trigger: CCAGGCCCTTCCACCTCCCCATCTGTAAAACGAGGC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCAAAATACTGACGTCCTaGAATGTGCAACAACACACC +
Preference number: 4 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCKILTS*NVQQHT
Trigger: GGTGTGTTGTTGCACATTCCAGGACGTCAGTATTTT...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGTGTGCGGATGTGGATaGGCATCTTGTACCTGGCGT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELVCGCG*ASCTWR
Trigger: ACGCCAGGTACAAGATGCTCATCCACATCCGCACAC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGAGGCCAGCCATGAATaGCCTAGCACCATCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELEASHE*PSTILA
Trigger: AGCAAGGATGGTGCTAGGTCATTCATGGCTGGCCTC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGCTTCTCACCTGTGTaGGACCGGTTGTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGFSPV*DRLWIF
Trigger: GAAGATCCACAACCGGTCGCACACAGGTGAGAAGCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGTGCAGGAGCTCTTGCTaGTCGTGGGACACAAAGTGG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELCRSSC*SWDTKW
Trigger: CCACTTTGTGTCCCACGAGCAGCAAGAGCTCCTGCA...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGTGGGAGAGGGCAACTTaGCATGGGTGGTCACTAGGT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELWERAT*HGWSLG
Trigger: ACCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCA...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR GCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCCTGTTCCTCCGCTCTaGTCAAGTCGCAAACCCATG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELPVPPL*SSRKPM
Trigger: CATGGGTTTGCGACTTGAGCAGAGCGGAGGAACAGG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCCTTCTCGGGGAACTTaGAGTTCAGCAGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELPSRGT*SSAGSL
Trigger: CAGGCTTCCTGCTGAACTCCAAGTTCCCCGAGAAGG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGTGTGCGACCGGTTGTaGATCTTCAGGTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELVCDRL*IFRFSR
Trigger: CCTGGAGAACCTGAAGATCCACAACCGGTCGCACAC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGTCTTGCTTTCCCTCTaGAGGCAGGGTCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELVLLSL*RQGQRE
Trigger: TTCCCTCTGACCCTGCCTCCAGAGGGAAAGCAAGAC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTGCTCTGCTGTATGCTaGCAAATTGTAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDCSAVC*QIVVQK
Trigger: TTTTTGAACTACAATTTGCCAGCATACAGCAGAGCA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGATCCAAATAGCGCAGTaGCTGGAAGTCCGAGGCACT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELIQIAQ*LEVRGT
Trigger: AGTGCCTCGGACTTCCAGCCACTGCGCTATTTGGAT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAACCTGTTAAAATACTaGCGTCCTGGAATGTGCAAC +
Preference number: 4 (lower is better)
Translates to: WGSASEKAAQQGKARGSNNLLKY*RPGMCN
Trigger: GTTGCACATTCCAGGACGTCAGTATTTTAACAGGTT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGAGAACTGGAAGGAGCTaGGGACACCATCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELRTGRS*GHHPNS
Trigger: GCTATTTGGATGGTGTCCCCAGCTCCTTCCAGTTCT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR TCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGACAGACTCGCGTTCTTaGGTGTGTTTTGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELTDSRS*VCFVWA
Trigger: AGCCCAAACAAAACACACTCAAGAACGCGAGTCTGT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGAAAATACTGACGTCCTaGAATGTGCAACAACACACC +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELKILTS*NVQQHT
Trigger: GGTGTGTTGTTGCACATTCCAGGACGTCAGTATTTT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CCA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGTGCTCTGCTGTATGCTaGCAAATTGTAGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELCSAVC*QIVVQK
Trigger: TTTTTGAACTACAATTTGCCAGCATACAGCAGAGCA...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS TCA 90 bp CATCAGCACCCTGCGCGGCGCCCGCGGCCAGGGCAGCGAGTGCAGTaGGCGGATACACGCGAGGGAGAAGCCCCGCACCCGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: HQHPARRPRPGQRVQ*ADTREGEAPHPAQL
Trigger: CAGCTGGGCCGGGTGCGGGGCTTCTCCCTCGCGTGTATCCGCTCACTGCACTCGCTGCCCTGGCCGCGGGCGCCGCGCAGGGTGCTGATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS GCA 90 bp CTGGACATCAGCACCCTGCGCGGCGCCCGCGGCCAGGGCAGCGAGTaGAGTGAGCGGATACACGCGAGGGAGAAGCCCCGCACCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LDISTLRGARGQGSE*SERIHAREKPRTRP
Trigger: GGGCCGGGTGCGGGGCTTCTCCCTCGCGTGTATCCGCTCACTGCACTCGCTGCCCTGGCCGCGGGCGCCGCGCAGGGTGCTGATGTCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS TCA 90 bp CCCCGGGCGGCGGGGAAGGCGGCAGGAATGCCTCTCTGCGGGCCCTaGTTTCTCCGCCCAGCCCAGTTCCAGGAACGCGCAGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: PRAAGKAAGMPLCGP*FLRPAQFQERAGSA
Trigger: GGCGCTGCCTGCGCGTTCCTGGAACTGGGCTGGGCGGAGAAATCAGGGCCCGCAGAGAGGCATTCCTGCCGCCTTCCCCGCCGCCCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS CCA 90 bp CCTGCGTCCACTAGCCCGAGCGCCGCGGGAGGTCTAGATCCCTCCTaGACATCAGCACCCTGCGCGGCGCCCGCGGCCAGGGCAGCGAGT +
Preference number: 5 (lower is better)
Translates to: PASTSPSAAGGLDPS*TSAPCAAPAARAAS
Trigger: ACTCGCTGCCCTGGCCGCGGGCGCCGCGCAGGGTGCTGATGTCCAGGAGGGATCTAGACCTCCCGCGGCGCTCGGGCTAGTGGACGCAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGAGGCAGGTCCCCGTaGCCCTGGCGCTCGGGGGAC +
Preference number: 5 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGGRSP*PWRSGD
Trigger: GTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS TCA 90 bp CCACCCAGCCAGGGGCCAACGCCTCTGGGCTGCTGGCAGCTGAGTTaGCGCCCGTGGACAGGTCCAGCACGGTGCCTGGCAGCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: PPSQGPTPLGCWQLS*RPWTGPARCLAAGG
Trigger: TCCCCCTGCTGCCAGGCACCGTGCTGGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCAGCCCAGAGGCGTTGGCCCCTGGCTGGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACGGAGGCAGGTCCCCGTaGCCCTGGCGCTCGGGGGAC +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHGGRSP*PWRSGD
Trigger: GTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTCC...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGGAGGCAGGTCCCCGTaGCCCTGGCGCTCGGGGGAC +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSGGRSP*PWRSGD
Trigger: GTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTCC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS TCA 90 bp GATGACCACCCAGCCAGGGGCCAACGCCTCTGGGCTGCTGGCAGCTaGGTTGACGCCCGTGGACAGGTCCAGCACGGTGCCTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: DDHPARGQRLWAAGS*VDARGQVQHGAWQQ
Trigger: CTGCTGCCAGGCACCGTGCTGGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCAGCCCAGAGGCGTTGGCCCCTGGCTGGGTGGTCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCTTCTCCCCCTCGGCCTaGCCACCAGCTGCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAFSPSA*PPAAPA
Trigger: TGCTGGCGCAGCTGGTGGCAAGGCCGAGGGGGAGAA...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCGGAGTCCATCGGGGCTaGGCCGGGAGCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAGVHRG*AGSSCS
Trigger: AGAGCAGCTGCTCCCGGCCAAGCCCCGATGGACTCC...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCAGGCGGGAGAAGCTCTaGCTGCAGGTCGGACAGCGG +
Preference number: 5 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQARREKL*LQVGQR
Trigger: CCGCTGTCCGACCTGCAGCAAGAGCTTCTCCCGCCT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATTCTCCCCCTCGGCCTaGCCACCAGCTGCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQFSPSA*PPAAPA
Trigger: TGCTGGCGCAGCTGGTGGCAAGGCCGAGGGGGAGAA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGGAGTCCATCGGGGCTaGGCCGGGAGCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLGVHRG*AGSSCS
Trigger: AGAGCAGCTGCTCCCGGCCAAGCCCCGATGGACTCC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGAGTCCATCGGGGCTaGGCCGGGAGCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQGVHRG*AGSSCS
Trigger: AGAGCAGCTGCTCCCGGCCAAGCCCCGATGGACTCC...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCTGCTGGCAGCTGAGTaGACGCCCGTGGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQALLAAE*TPVDRS
Trigger: GGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCAG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGACCTAGCACCATCCTaGCTCCCGGCGGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLDLAPS*LPAGWA
Trigger: AGCCCAGCCCGCCGGGAGCAAGGATGGTGCTAGGTC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS GCA 90 bp AGCACGGGGCCGGACCACACCCAGCGTCCTCTCCCGCTTCTCTCTTaGCGCCCGGAGCTTGGTGATACTCAGCTTCAGGTCGAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: STGPDHTQRPLPLLS*RPELGDTQLQVERL
Trigger: GAGCCGCTCGACCTGAAGCTGAGTATCACCAAGCTCCGGGCGGCAAGAGAGAAGCGGGAGAGGACGCTGGGTGTGGTCCGGCCCCGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCTCTTCCCAGCGCAGTaGGCCTTGAGGAGCCTAGGA +
Preference number: 5 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSLFPAQ*ALRSLG
Trigger: TCCTAGGCTCCTCAAGGCCAACTGCGCTGGGAAGAG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCTTGCCGCCCGGAGCTaGGTGATACTCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSLAARS*VILSFR
Trigger: CCTGAAGCTGAGTATCACCAAGCTCCGGGCGGCAAG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGGAGGCAGGTCCCCGTaGCCCTGGCGCTCGGGGGAC +
Preference number: 5 (lower is better)
Translates to: WGSASEKAAQQGKARGSNGGRSP*PWRSGD
Trigger: GTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTCC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCTCTGGCGAGAGGCACTaGTCCTTGGGAGGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSSGERH*SLGGVR
Trigger: CCTTACCCCTCCCAAGGACAAGTGCCTCTCGCCAGA...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTTTCTCCCCCTCGGCCTaGCCACCAGCTGCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSFSPSA*PPAAPA
Trigger: TGCTGGCGCAGCTGGTGGCAAGGCCGAGGGGGAGAA...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAATTCACCACAGCCGGTTaGAGCAGCACCGAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQFTTAG*SSTEPG
Trigger: GCCGGGCTCGGTGCTGCTCAAACCGGCTGTGGTGAA...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGACCTAGCACCATCCTaGCTCCCGGCGGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSDLAPS*LPAGWA
Trigger: AGCCCAGCCCGCCGGGAGCAAGGATGGTGCTAGGTC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGGGCCTGCATCTGTCTaGCTTTCCCTCTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSGPASV*LSLWRQ
Trigger: CTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCCC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCGCTTGGTTCCTAGCTaGGTCCCAGCATTTGGGACC +
Preference number: 5 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRLVPS*VPAFGT
Trigger: GGTCCCAAATGCTGGGACCAAGCTAGGAACCAAGCG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAGGCGGGAGAAGCTCTaGCTGCAGGTCGGACAGCGG +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHRREKL*LQVGQR
Trigger: CCGCTGTCCGACCTGCAGCAAGAGCTTCTCCCGCCT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGGCGGGAGAAGCTCTaGCTGCAGGTCGGACAGCGG +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDRREKL*LQVGQR
Trigger: CCGCTGTCCGACCTGCAGCAAGAGCTTCTCCCGCCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACTTTCAAGGGGCGTCTaGTGGCCCTCCATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQLSRGV*WPSMPR
Trigger: CCTGGGCATGGAGGGCCACAAGACGCCCCTTGAAAG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCTTTCAAGGGGCGTCTaGTGGCCCTCCATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLLSRGV*WPSMPR
Trigger: CCTGGGCATGGAGGGCCACAAGACGCCCCTTGAAAG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCTGCTGGCAGCTGAGTaGACGCCCGTGGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSLLAAE*TPVDRS
Trigger: GGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCAG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTTTCACCACAGCCGGTTaGAGCAGCACCGAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSFTTAG*SSTEPG
Trigger: GCCGGGCTCGGTGCTGCTCAAACCGGCTGTGGTGAA...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCCTGCATGCTGTCACTaGGAGCCCCCAGACCAGGAG +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLPACCH*EPPDQE
Trigger: CTCCTGGTCTGGGGGCTCCAAGTGACAGCATGCAGG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS TCA 90 bp CACCCAGCGTCCTCTCCCGCTTCTCTCTTGCCGCCCGGAGCTTGGTaGTACTCAGCTTCAGGTCGAGCGGCTCGTCCAGGGAGTGCATGG +
Preference number: 5 (lower is better)
Translates to: HPASSPASLLPPGAW*YSASGRAARPGSAW
Trigger: CCATGCACTCCCTGGACGAGCCGCTCGACCTGAAGCTGAGTATCACCAAGCTCCGGGCGGCAAGAGAGAAGCGGGAGAGGACGCTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS GCA 90 bp AGCTTGGTGATACTCAGCTTCAGGTCGAGCGGCTCGTCCAGGGAGTaGATGGTGAGGGGGCCGGAGTTGGAGGTGGCAGCAGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: SLVILSFRSSGSSRE*MVRGPELEVAAGSG
Trigger: CCCACTGCCTGCTGCCACCTCCAACTCCGGCCCCCTCACCATGCACTCCCTGGACGAGCCGCTCGACCTGAAGCTGAGTATCACCAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CCA 90 bp GAGGCCCGATGCCGAGCAATCCGAGCTTCCGCTTGGTTCCTAGCTTaGTCCCAGCATTTGGGACCACCTGCGTCCACTAGCCCGAGCGCC +
Preference number: 5 (lower is better)
Translates to: EARCRAIRASAWFLA*SQHLGPPASTSPSA
Trigger: GGCGCTCGGGCTAGTGGACGCAGGTGGTCCCAAATGCTGGGACCAAGCTAGGAACCAAGCGGAAGCTCGGATTGCTCGGCATCGGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS CCA 90 bp ACACTTGGCCCAGCGACACACCAGCTGCTTGGGCAGGGGCAGGTCTaGCGAGAGGCACTTGTCCTTGGGAGGGGTAAGGAAGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: TLGPATHQLLGQGQV*REALVLGRGKEGGG
Trigger: GCCTCCTCCTTCCTTACCCCTCCCAAGGACAAGTGCCTCTCGCCAGACCTGCCCCTGCCCAAGCAGCTGGTGTGTCGCTGGGCCAAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACCAGCGCAGTTGGCCTaGAGGAGCCTAGGAGACGAA +
Preference number: 5 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQPAQLA*RSLGDE
Trigger: TTCGTCTCCTAGGCTCCTCAAGGCCAACTGCGCTGG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGCTTGGTCCCAGCATTaGGGACCACCTGCGTCCACT +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLAWSQH*GPPAST
Trigger: AGTGGACGCAGGTGGTCCCAAATGCTGGGACCAAGC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCCTTGCCGCCCGGAGCTaGGTGATACTCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLLAARS*VILSFR
Trigger: CCTGAAGCTGAGTATCACCAAGCTCCGGGCGGCAAG...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCCAGCTGCAGGAGCTCTaGCTGCTCGTGGGACACAAA +
Preference number: 5 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAQLQEL*LLVGHK
Trigger: TTTGTGTCCCACGAGCAGCAAGAGCTCCTGCAGCTG...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCTTTCAAGGGGCGTCTaGTGGCCCTCCATGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDLSRGV*WPSMPR
Trigger: CCTGGGCATGGAGGGCCACAAGACGCCCCTTGAAAG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACTGGGAGAGGGCAACTaGCCATGGGTGGTCACTAGG +
Preference number: 5 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQLGEGN*PWVVTR
Trigger: CCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCAG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGGGCCTGCATCTGTCTaGCTTTCCCTCTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLGPASV*LSLWRQ
Trigger: CTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCCC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCCTGCATGCTGTCACTaGGAGCCCCCAGACCAGGAG +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDPACCH*EPPDQE
Trigger: CTCCTGGTCTGGGGGCTCCAAGTGACAGCATGCAGG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCCAGCGCAGTTGGCCTaGAGGAGCCTAGGAGACGAA +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHPAQLA*RSLGDE
Trigger: TTCGTCTCCTAGGCTCCTCAAGGCCAACTGCGCTGG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACCTCTTCCCAGCGCAGTaGGCCTTGAGGAGCCTAGGA +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDLFPAQ*ALRSLG
Trigger: TCCTAGGCTCCTCAAGGCCAACTGCGCTGGGAAGAG...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCCGCCCTGTTATCTTCTaGCTGCTCTGCTGTATGCTG +
Preference number: 5 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSRPVIF*LLCCML
Trigger: CAGCATACAGCAGAGCAGCAAGAAGATAACAGGGCG...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp GCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAGGCCCTCCGTTTTCTGCCTCGTGTaGAACCACAGACTCGCGTTC +
Preference number: 5 (lower is better)
Translates to: AASIPQGVLGWDWGTRPSVFCLV*NHRLAF
Trigger: GAACGCGAGTCTGTGGTTCAACACGAGGCAGAAAAC...GGAGGGCCTTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACGCTTGGTTCCTAGCTaGGTCCCAGCATTTGGGACC +
Preference number: 5 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQRLVPS*VPAFGT
Trigger: GGTCCCAAATGCTGGGACCAAGCTAGGAACCAAGCG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCTTGCCGCCCGGAGCTaGGTGATACTCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCLAARS*VILSFR
Trigger: CCTGAAGCTGAGTATCACCAAGCTCCGGGCGGCAAG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCACCTTCTCGGGGAACTaGGAGTTCAGCAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQATFSGN*EFSRKP
Trigger: AGGCTTCCTGCTGAACTCCAAGTTCCCCGAGAAGGT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACTCTGGCGAGAGGCACTaGTCCTTGGGAGGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDSGERH*SLGGVR
Trigger: CCTTACCCCTCCCAAGGACAAGTGCCTCTCGCCAGA...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACTCTGGCGAGAGGCACTaGTCCTTGGGAGGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHSGERH*SLGGVR
Trigger: CCTTACCCCTCCCAAGGACAAGTGCCTCTCGCCAGA...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCAAGAGCTGGTTACACTaGGCCCAGCGACACACCAGC +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLKSWLH*AQRHTS
Trigger: GCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCTT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCATGGTCCACCAGGTCTaGCAGGAGCTCAAAGAGCTG +
Preference number: 5 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAMVHQV*QELKEL
Trigger: CAGCTCTTTGAGCTCCTGCAAGACCTGGTGGACCAT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCAAGTGGCCATGGGCCTaGATGTGCTTGCGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLKWPWA*MCLRSE
Trigger: CTCACTGCGCAAGCACATCAAGGCCCATGGCCACTT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAACAGCTGCAGGAGCTCTaGCTGCTCGTGGGACACAAA +
Preference number: 5 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQQLQEL*LLVGHK
Trigger: TTTGTGTCCCACGAGCAGCAAGAGCTCCTGCAGCTG...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACGACCTAGCACCATCCTaGCTCCCGGCGGGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: WGSASEKAAQQGKARGSNDLAPS*LPAGWA
Trigger: AGCCCAGCCCGCCGGGAGCAAGGATGGTGCTAGGTC...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCTGGGAGAGGGCAACTaGCCATGGGTGGTCACTAGG +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHLGEGN*PWVVTR
Trigger: CCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCAG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCTGGGAGAGGGCAACTaGCCATGGGTGGTCACTAGG +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSLGEGN*PWVVTR
Trigger: CCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCAG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCAGGTCACTCAGTATCTaGGCACCACAGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLRSLSI*APQLAW
Trigger: CCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCAATCCGAGCTTCCGCTaGGTTCCTAGCTTGGTCCCA +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLNPSFR*VPSLVP
Trigger: TGGGACCAAGCTAGGAACCAAGCGGAAGCTCGGATT...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp GGTGCATGGCTGCGTCCATCCCTCAGGGCGTCCTGGGATGGGACTGGGGCACAAACCTTCTCGGGGAACTaGGAGTTCAGCAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: GAWLRPSLRASWDGTGAQTFSGN*EFSRKP
Trigger: AGGCTTCCTGCTGAACTCCAAGTTCCCCGAGAAGGT...TTGTGCCCCAGTCCCATCCCAGGACGCCCTGAGGGATGGACGCAGCCATGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAAGAGCTGGTTACACTaGGCCCAGCGACACACCAGC +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHKSWLH*AQRHTS
Trigger: GCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCTT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACATCTTGTACCTGGCGTaGAAACCTCGGCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDILYLA*KPRPWR
Trigger: CCGCCATGGCCGAGGTTTCAACGCCAGGTACAAGAT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTATCTTGTACCTGGCGTaGAAACCTCGGCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSILYLA*KPRPWR
Trigger: CCGCCATGGCCGAGGTTTCAACGCCAGGTACAAGAT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCCTGTGTGCGACCGGTaGTGGATCTTCAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHPVCDR*WIFRFS
Trigger: GGAGAACCTGAAGATCCACAACCGGTCGCACACAGG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTCCTGTGTGCGACCGGTaGTGGATCTTCAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSPVCDR*WIFRFS
Trigger: GGAGAACCTGAAGATCCACAACCGGTCGCACACAGG...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACAAGTGGCCATGGGCCTaGATGTGCTTGCGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHKWPWA*MCLRSE
Trigger: CTCACTGCGCAAGCACATCAAGGCCCATGGCCACTT...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTAAGTGGCCATGGGCCTaGATGTGCTTGCGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSKWPWA*MCLRSE
Trigger: CTCACTGCGCAAGCACATCAAGGCCCATGGCCACTT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCCAGCTGCAGGAGCTCTaGCTGCTCGTGGGACACAAA +
Preference number: 5 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCQLQEL*LLVGHK
Trigger: TTTGTGTCCCACGAGCAGCAAGAGCTCCTGCAGCTG...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCAGCTGCAGGAGCTCTaGCTGCTCGTGGGACACAAA +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHQLQEL*LLVGHK
Trigger: TTTGTGTCCCACGAGCAGCAAGAGCTCCTGCAGCTG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACCTGCTGGCAGCTGAGTaGACGCCCGTGGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: WGSASEKAAQQGKARGSNLLAAE*TPVDRS
Trigger: GGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCAG...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACTTCACCACAGCCGGTTaGAGCAGCACCGAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: WGSASEKAAQQGKARGSNFTTAG*SSTEPG
Trigger: GCCGGGCTCGGTGCTGCTCAAACCGGCTGTGGTGAA...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTAGGTCACTCAGTATCTaGGCACCACAGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSRSLSI*APQLAW
Trigger: CCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACAGGTCACTCAGTATCTaGGCACCACAGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDRSLSI*APQLAW
Trigger: CCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTAATCCGAGCTTCCGCTaGGTTCCTAGCTTGGTCCCA +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSNPSFR*VPSLVP
Trigger: TGGGACCAAGCTAGGAACCAAGCGGAAGCTCGGATT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACACCTTCTCGGGGAACTaGGAGTTCAGCAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDTFSGN*EFSRKP
Trigger: AGGCTTCCTGCTGAACTCCAAGTTCCCCGAGAAGGT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACATGGTCCACCAGGTCTaGCAGGAGCTCAAAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDMVHQV*QELKEL
Trigger: CAGCTCTTTGAGCTCCTGCAAGACCTGGTGGACCAT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGTTTTCTGCCTCGTGTaGAACCACAGACTCGCGTTC +
Preference number: 5 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCVFCLV*NHRLAF
Trigger: GAACGCGAGTCTGTGGTTCAACACGAGGCAGAAAAC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACTCTGGCGAGAGGCACTaGTCCTTGGGAGGGGTAAGG +
Preference number: 5 (lower is better)
Translates to: WGSASEKAAQQGKARGSNSGERH*SLGGVR
Trigger: CCTTACCCCTCCCAAGGACAAGTGCCTCTCGCCAGA...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp AGATGGGGAGGTGGAAGGGCCTGGCCACTCAGAGGCCTGGTGACAGGGCAGGCCATGTGGATGAGCATCTaGTACCTGGCGTTGAAACCT +
Preference number: 5 (lower is better)
Translates to: RWGGGRAWPLRGLVTGQAMWMSI*YLALKP
Trigger: AGGTTTCAACGCCAGGTACAAGATGCTCATCCACAT...GGCCTGCCCTGTCACCAGGCCTCTGAGTGGCCAGGCCCTTCCACCTCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGTTCTCCCCCTCGGCCTaGCCACCAGCTGCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELFSPSA*PPAAPA
Trigger: TGCTGGCGCAGCTGGTGGCAAGGCCGAGGGGGAGAA...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCTGAGCCAGGGCCCAGGTCACTCAGTATCTTGGCACCACAGCTGGCCTGGCACCACAGACTCGCGTTCTaGAGTGTGTTTTGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: PEPGPRSLSILAPQLAWHHRLAF*SVFCLG
Trigger: GCCCAAACAAAACACACTCAAGAACGCGAGTCTGTG...GTGCCAGGCCAGCTGTGGTGCCAAGATACTGAGTGACCTGGGCCCTGGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAAGAGCTGGTTACACTaGGCCCAGCGACACACCAGC +
Preference number: 5 (lower is better)
Translates to: WGSASEKAAQQGKARGSNKSWLH*AQRHTS
Trigger: GCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCTT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGAGGCGGGAGAAGCTCTaGCTGCAGGTCGGACAGCGG +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELRREKL*LQVGQR
Trigger: CCGCTGTCCGACCTGCAGCAAGAGCTTCTCCCGCCT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACAAGTGGCCATGGGCCTaGATGTGCTTGCGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: WGSASEKAAQQGKARGSNKWPWA*MCLRSE
Trigger: CTCACTGCGCAAGCACATCAAGGCCCATGGCCACTT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGTTCACCACAGCCGGTTaGAGCAGCACCGAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELFTTAG*SSTEPG
Trigger: GCCGGGCTCGGTGCTGCTCAAACCGGCTGTGGTGAA...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACGTTCTTGAGTGTGTTTaGTTTGGGCTAATCCCGTGC +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDVLECV*FGLIPC
Trigger: GCACGGGATTAGCCCAAACAAAACACACTCAAGAAC...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp GCCACTCAGAGGCCTGGTGACAGGGCAGGCCTAGAAGCCAGAACTCCCAGCTGCGTTCTTGAGTGTGTTTaGTTTGGGCTAATCCCGTGC +
Preference number: 5 (lower is better)
Translates to: ATQRPGDRAGLEARTPSCVLECV*FGLIPC
Trigger: GCACGGGATTAGCCCAAACAAAACACACTCAAGAAC...GCAGCTGGGAGTTCTGGCTTCTAGGCCTGCCCTGTCACCAGGCCTCTGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp TGGGGAAGTGCCTCTGAGAAAGCGGCCCAGCAGGGAAAAGCCAGAGGAAGCAACACCTTCTCGGGGAACTaGGAGTTCAGCAGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: WGSASEKAAQQGKARGSNTFSGN*EFSRKP
Trigger: AGGCTTCCTGCTGAACTCCAAGTTCCCCGAGAAGGT...GTTGCTTCCTCTGGCTTTTCCCTGCTGGGCCGCTTTCTCAGAGGCACTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CTCGGACCTGCTTCCCACGCTCCCAGGGTGCCCCAAAAGGTAGAGGGAGGAGACATGTGGATGAGCATCTaGTACCTGGCGTTGAAACCT +
Preference number: 5 (lower is better)
Translates to: LGPASHAPRVPQKVEGGDMWMSI*YLALKP
Trigger: AGGTTTCAACGCCAGGTACAAGATGCTCATCCACAT...GTCTCCTCCCTCTACCTTTTGGGGCACCCTGGGAGCGTGGGAAGCAGGTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTATGTGGATGAGCATCTaGTACCTGGCGTTGAAACCT +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSMWMSI*YLALKP
Trigger: AGGTTTCAACGCCAGGTACAAGATGCTCATCCACAT...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGCTTGGTCCCAGCATTaGGGACCACCTGCGTCCACT +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELAWSQH*GPPAST
Trigger: AGTGGACGCAGGTGGTCCCAAATGCTGGGACCAAGC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCTGGGAGAGGGCAACTaGCCATGGGTGGTCACTAGG +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELLGEGN*PWVVTR
Trigger: CCTAGTGACCACCCATGGCAAGTTGCCCTCTCCCAG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGGGGCCTGCATCTGTCTaGCTTTCCCTCTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELGPASV*LSLWRQ
Trigger: CTGCCTCCAGAGGGAAAGCAAGACAGATGCAGGCCC...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGAAGAGCTGGTTACACTaGGCCCAGCGACACACCAGC +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELKSWLH*AQRHTS
Trigger: GCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCTT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGATCTTGTACCTGGCGTaGAAACCTCGGCCATGGCGG +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELILYLA*KPRPWR
Trigger: CCGCCATGGCCGAGGTTTCAACGCCAGGTACAAGAT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCCTGTGTGCGACCGGTaGTGGATCTTCAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELPVCDR*WIFRFS
Trigger: GGAGAACCTGAAGATCCACAACCGGTCGCACACAGG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CCAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCGGCAGTAGGACATTATaGCTATTTCACAGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: PGGGGQTGARLQHPGAQLGSRTL*LFHRRV
Trigger: AACTCTTCTGTGAAATAGCAATAATGTCCTACTGCC...GAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGATGGTCCACCAGGTCTaGCAGGAGCTCAAAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELMVHQV*QELKEL
Trigger: CAGCTCTTTGAGCTCCTGCAAGACCTGGTGGACCAT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp CAGGTGGTGGGGGACAGACAGGAGCGAGGCTTCAGCACCCAGGAGCACAGCTCTGGCAGTAGGACATTATaGCTATTTCACAGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: QVVGDRQERGFSTQEHSSGSRTL*LFHRRV
Trigger: AACTCTTCTGTGAAATAGCAATAATGTCCTACTGCC...AGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGTCTGTCCCCCACCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGCACAGACTCGCGTTCTaGAGTGTGTTTTGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELHRLAF*SVFCLG
Trigger: GCCCAAACAAAACACACTCAAGAACGCGAGTCTGTG...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS-3UTR CAA 90 bp TTATTGCTATTTCACAGAAGAGTTTCCGTTCGTCGGGGGCAGTGCCGGGAGCTGATGTGGATGAGCATCTaGTACCTGGCGTTGAAACCT +
Preference number: 5 (lower is better)
Translates to: LLLFHRRVSVRRGQCRELMWMSI*YLALKP
Trigger: AGGTTTCAACGCCAGGTACAAGATGCTCATCCACAT...CAGCTCCCGGCACTGCCCCCGACGAACGGAAACTCTTCTGTGAAATAGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS TCA 72 bp CCTGCGCGGCGCCCGCGGCCAGGGCAGCGAGTGCAGTaGGCGGATACACGCGAGGGAGAAGCCCCGCACCCG +
Preference number: 6 (lower is better)
Translates to: PARRPRPGQRVQ*ADTREGEAPHP
Trigger: CGGGTGCGGGGCTTCTCCCTCGCGTGTATCCGCTCACTGCACTCGCTGCCCTGGCCGCGGGCGCCGCGCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS GCA 72 bp AGGCAGCGCCCGGCGGGCAGAGGTCCCGGATCCCGATaGCGGGCGGCGCAAACCAGTTTTCGGGGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: RQRPAGRGPGSR*RAAQTSFRGPA
Trigger: CGCCGGGCCCCGAAAACTGGTTTGCGCCGCCCGGCATCGGGATCCGGGACCTCTGCCCGCCGGGCGCTGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS GCA 72 bp AGCACCCTGCGCGGCGCCCGCGGCCAGGGCAGCGAGTaGAGTGAGCGGATACACGCGAGGGAGAAGCCCCGC +
Preference number: 6 (lower is better)
Translates to: STLRGARGQGSE*SERIHAREKPR
Trigger: GCGGGGCTTCTCCCTCGCGTGTATCCGCTCACTGCACTCGCTGCCCTGGCCGCGGGCGCCGCGCAGGGTGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS CCA 72 bp ACTAGCCCGAGCGCCGCGGGAGGTCTAGATCCCTCCTaGACATCAGCACCCTGCGCGGCGCCCGCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TSPSAAGGLDPS*TSAPCAAPAAR
Trigger: CCTGGCCGCGGGCGCCGCGCAGGGTGCTGATGTCCAGGAGGGATCTAGACCTCCCGCGGCGCTCGGGCTAGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS CCA 72 bp GAGGCACTGGGCACTGGAGGCAGGTCCCCGTTGCCCTaGCGCTCGGGGGACAGCGAGCTGCTGCCATTGGGG +
Preference number: 6 (lower is better)
Translates to: EALGTGGRSPLP*RSGDSELLPLG
Trigger: CCCCAATGGCAGCAGCTCGCTGTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTCCAGTGCCCAGTGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CAA 90 bp ACCACCCAGCCAGGGGCCAACGCCTCTGGGCTGCTGGCAGCTGAGTaGACGCCCGTGGACAGGTCCAGCACGGTGCCTGGCAGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: TTQPGANASGLLAAE*TPVDRSSTVPGSRG
Trigger: CCCCCTGCTGCCAGGCACCGTGCTGGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCAGCCCAGAGGCGTTGGCCCCTGGCTGGGTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS GCA 72 bp AGTCCGAGGCACTGGGCACTGGAGGCAGGTCCCCGTTaGCCTGGCGCTCGGGGGACAGCGAGCTGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: SPRHWALEAGPR*PGARGTASCCH
Trigger: ATGGCAGCAGCTCGCTGTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTCCAGTGCCCAGTGCCTCGGACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS GCA 72 bp TGGGCACCGACCCACGCCCCTTCTCCCCCTCGGCCTTaGCACCAGCTGCGCCAGCAAGGAGGGAGACCACAG +
Preference number: 6 (lower is better)
Translates to: WAPTHAPSPPRP*HQLRQQGGRPQ
Trigger: CTGTGGTCTCCCTCCTTGCTGGCGCAGCTGGTGGCAAGGCCGAGGGGGAGAAGGGGCGTGGGTCGGTGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CAA 72 bp AAGTCCGAGGCACTGGGCACTGGAGGCAGGTCCCCGTaGCCCTGGCGCTCGGGGGACAGCGAGCTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: KSEALGTGGRSP*PWRSGDSELLP
Trigger: TGGCAGCAGCTCGCTGTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTCCAGTGCCCAGTGCCTCGGACTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CAA 72 bp CCGCCAGCCCCAAAGGGCGAGGGCAGCAGCGGGTTCTaGGCCAGATTGAGAGGCAGGACGGGGCCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: PPAPKGEGSSGF*ARLRGRTGPGS
Trigger: GCTGCCAGGCCCCGTCCTGCCTCTCAATCTGGCCAAGAACCCGCTGCTGCCCTCGCCCTTTGGGGCTGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CAA 72 bp CCAGGGGCCAACGCCTCTGGGCTGCTGGCAGCTGAGTaGACGCCCGTGGACAGGTCCAGCACGGTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PGANASGLLAAE*TPVDRSSTVPG
Trigger: GCCAGGCACCGTGCTGGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCAGCCCAGAGGCGTTGGCCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS TCA 72 bp CAGGGGCCAACGCCTCTGGGCTGCTGGCAGCTGAGTTaGCGCCCGTGGACAGGTCCAGCACGGTGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: QGPTPLGCWQLS*RPWTGPARCLA
Trigger: TGCCAGGCACCGTGCTGGACCTGTCCACGGGCGTCAACTCAGCTGCCAGCAGCCCAGAGGCGTTGGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CCA 72 bp CACGGTGCCTGGCAGCAGGGGGAGTCCATCGGGGCTTaGCCGGGAGCAGCTGCTCTCCGTCCTTTCAAGGGG +
Preference number: 6 (lower is better)
Translates to: HGAWQQGESIGA*PGAAALRPFKG
Trigger: CCCCTTGAAAGGACGGAGAGCAGCTGCTCCCGGCCAAGCCCCGATGGACTCCCCCTGCTGCCAGGCACCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CAA 72 bp GCACGGTGCCTGGCAGCAGGGGGAGTCCATCGGGGCTaGGCCGGGAGCAGCTGCTCTCCGTCCTTTCAAGGG +
Preference number: 6 (lower is better)
Translates to: ARCLAAGGVHRG*AGSSCSPSFQG
Trigger: CCCTTGAAAGGACGGAGAGCAGCTGCTCCCGGCCAAGCCCCGATGGACTCCCCCTGCTGCCAGGCACCGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CAA 90 bp GCACCACAACTGTCCGCAGGATGGGCTCAGTTCACCACAGCCGGTTaGAGCAGCACCGAGCCCGGCGGGATGACCACCCAGCCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: APQLSAGWAQFTTAG*SSTEPGGMTTQPGA
Trigger: GGCCCCTGGCTGGGTGGTCATCCCGCCGGGCTCGGTGCTGCTCAAACCGGCTGTGGTGAACTGAGCCCATCCTGCGGACAGTTGTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS TCA 72 bp GCGGGGAAGGCGGCAGGAATGCCTCTCTGCGGGCCCTaGTTTCTCCGCCCAGCCCAGTTCCAGGAACGCGCA +
Preference number: 6 (lower is better)
Translates to: AGKAAGMPLCGP*FLRPAQFQERA
Trigger: TGCGCGTTCCTGGAACTGGGCTGGGCGGAGAAATCAGGGCCCGCAGAGAGGCATTCCTGCCGCCTTCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS GCA 72 bp CAACCCCTCACGCTGGTGAGACGGCGGGCGACTCCCTaGCGTGCCCTCGGTCTCAGTTTCCCTCACGGTAGA +
Preference number: 6 (lower is better)
Translates to: QPLTLVRRRATP*RALGLSFPHGR
Trigger: TCTACCGTGAGGGAAACTGAGACCGAGGGCACGGCAGGGAGTCGCCCGCCGTCTCACCAGCGTGAGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS CAA 90 bp ACCACACCCAGCGTCCTCTCCCGCTTCTCTCTTGCCGCCCGGAGCTaGGTGATACTCAGCTTCAGGTCGAGCGGCTCGTCCAGGGAGTGC +
Preference number: 6 (lower is better)
Translates to: TTPSVLSRFSLAARS*VILSFRSSGSSREC
Trigger: GCACTCCCTGGACGAGCCGCTCGACCTGAAGCTGAGTATCACCAAGCTCCGGGCGGCAAGAGAGAAGCGGGAGAGGACGCTGGGTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS TCA 72 bp TCCTCTCCCGCTTCTCTCTTGCCGCCCGGAGCTTGGTaGTACTCAGCTTCAGGTCGAGCGGCTCGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: SSPASLLPPGAW*YSASGRAARPG
Trigger: CCCTGGACGAGCCGCTCGACCTGAAGCTGAGTATCACCAAGCTCCGGGCGGCAAGAGAGAAGCGGGAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS GCA 72 bp ATACTCAGCTTCAGGTCGAGCGGCTCGTCCAGGGAGTaGATGGTGAGGGGGCCGGAGTTGGAGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: ILSFRSSGSSRE*MVRGPELEVAA
Trigger: TGCTGCCACCTCCAACTCCGGCCCCCTCACCATGCACTCCCTGGACGAGCCGCTCGACCTGAAGCTGAGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS GCA 72 bp CCGGACCACACCCAGCGTCCTCTCCCGCTTCTCTCTTaGCGCCCGGAGCTTGGTGATACTCAGCTTCAGGTC +
Preference number: 6 (lower is better)
Translates to: PDHTQRPLPLLS*RPELGDTQLQV
Trigger: GACCTGAAGCTGAGTATCACCAAGCTCCGGGCGGCAAGAGAGAAGCGGGAGAGGACGCTGGGTGTGGTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CCA 72 bp CCAGCGACACACCAGCTGCTTGGGCAGGGGCAGGTCTaGCGAGAGGCACTTGTCCTTGGGAGGGGTAAGGAA +
Preference number: 6 (lower is better)
Translates to: PATHQLLGQGQV*REALVLGRGKE
Trigger: TTCCTTACCCCTCCCAAGGACAAGTGCCTCTCGCCAGACCTGCCCCTGCCCAAGCAGCTGGTGTGTCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS GCA 72 bp AAGAGCTGGTTACACTTGGCCCAGCGACACACCAGCTaGTTGGGCAGGGGCAGGTCTGGCGAGAGGCACTTG +
Preference number: 6 (lower is better)
Translates to: KSWLHLAQRHTS*LGRGRSGERHL
Trigger: CAAGTGCCTCTCGCCAGACCTGCCCCTGCCCAAGCAGCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CCA 72 bp CCCCGGAGCCGAGGGGCAGGAAGAACTGGAAGGAGCTaGGGACACCATCCAAATAGCGCAGTGGCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: PRSRGAGRTGRS*GHHPNSAVAGS
Trigger: ACTTCCAGCCACTGCGCTATTTGGATGGTGTCCCCAGCTCCTTCCAGTTCTTCCTGCCCCTCGGCTCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CAA 72 bp CGACGAGGCCCGATGCCGAGCAATCCGAGCTTCCGCTaGGTTCCTAGCTTGGTCCCAGCATTTGGGACCACC +
Preference number: 6 (lower is better)
Translates to: RRGPMPSNPSFR*VPSLVPAFGTT
Trigger: GGTGGTCCCAAATGCTGGGACCAAGCTAGGAACCAAGCGGAAGCTCGGATTGCTCGGCATCGGGCCTCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS GCA 72 bp CGAGGGAGAAGCCCCGCACCCGGCCCAGCTGTTTTCTaGCTCGTGTTGAACCACAGACTCGCGTTCTTGAGT +
Preference number: 6 (lower is better)
Translates to: RGRSPAPGPAVF*LVLNHRLAFLS
Trigger: ACTCAAGAACGCGAGTCTGTGGTTCAACACGAGGCAGAAAACAGCTGGGCCGGGTGCGGGGCTTCTCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS CCA 72 bp GACGAGGCCCGATGCCGAGCAATCCGAGCTTCCGCTTaGTTCCTAGCTTGGTCCCAGCATTTGGGACCACCT +
Preference number: 6 (lower is better)
Translates to: DEARCRAIRASA*FLAWSQHLGPP
Trigger: AGGTGGTCCCAAATGCTGGGACCAAGCTAGGAACCAAGCGGAAGCTCGGATTGCTCGGCATCGGGCCTCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS CCA 72 bp TGCCGAGCAATCCGAGCTTCCGCTTGGTTCCTAGCTTaGTCCCAGCATTTGGGACCACCTGCGTCCACTAGC +
Preference number: 6 (lower is better)
Translates to: CRAIRASAWFLA*SQHLGPPASTS
Trigger: GCTAGTGGACGCAGGTGGTCCCAAATGCTGGGACCAAGCTAGGAACCAAGCGGAAGCTCGGATTGCTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS CAA 72 bp GCTGTTGGACACCCCCTCTTCCCAGCGCAGTTGGCCTaGAGGAGCCTAGGAGACGAAAAAGGCATCCCAGAA +
Preference number: 6 (lower is better)
Translates to: AVGHPLFPAQLA*RSLGDEKGIPE
Trigger: TTCTGGGATGCCTTTTTCGTCTCCTAGGCTCCTCAAGGCCAACTGCGCTGGGAAGAGGGGGTGTCCAACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262366.7
ENST00000633051.1
CDS CAA 90 bp CTTCTCGGGCTTGACATGGTAATCGTTGACATGGTCCACCAGGTCTaGCAGGAGCTCAAAGAGCTGGTTACACTTGGCCCAGCGACACAC +
Preference number: 6 (lower is better)
Translates to: LLGLDMVIVDMVHQV*QELKELVTLGPATH
Trigger: GTGTGTCGCTGGGCCAAGTGTAACCAGCTCTTTGAGCTCCTGCAAGACCTGGTGGACCATGTCAACGATTACCATGTCAAGCCCGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1
CDS CAA 72 bp CTTGACATGGTAATCGTTGACATGGTCCACCAGGTCTaGCAGGAGCTCAAAGAGCTGGTTACACTTGGCCCA +
Preference number: 6 (lower is better)
Translates to: LDMVIVDMVHQV*QELKELVTLGP
Trigger: TGGGCCAAGTGTAACCAGCTCTTTGAGCTCCTGCAAGACCTGGTGGACCATGTCAACGATTACCATGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262366.7
ENST00000433375.2
ENST00000612491.1
ENST00000633051.1