RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLIS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000174332

Ensembl transcript IDs: ENST00000312233.4, ENST00000628545.1

Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTaGCTCCCCTGGGTCATGGCCTGGCTGTTCCGGCTGTGGCCTGGC +
Preference number: 1 (lower is better)
Translates to: ARMAAPWQRWVGWQR*LPWVMAWLFRLWPG
Trigger: GCCAGGCCACAGCCGGAACAGCCAGGCCATGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR CCA 90 bp GCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGCTCCCTaGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCATG +
Preference number: 1 (lower is better)
Translates to: AGTSVRPAQARMAAP*QRWVGWQRWLPWVM
Trigger: CATGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR CCA 90 bp CCAGCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTaGCAGCGCTGGCTCCCCTGGGTCATGGCCTGGCTGTTCCGGCTG +
Preference number: 1 (lower is better)
Translates to: PAQARMAAPWQRWVG*QRWLPWVMAWLFRL
Trigger: CAGCCGGAACAGCCAGGCCATGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR CCA 90 bp TCTGTGCGCCCAGCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTaGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCATGGCCTGGCTG +
Preference number: 1 (lower is better)
Translates to: SVRPAQARMAAPWQR*VGWQRWLPWVMAWL
Trigger: CAGCCAGGCCATGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGCTGGGCGCACAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR CCA 90 bp TGGCAGCGCTGGCTCCCCTGGGTCATGGCCTGGCTGTTCCGGCTGTaGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGC +
Preference number: 1 (lower is better)
Translates to: WQRWLPWVMAWLFRL*PGTPARCTEGGSDS
Trigger: GCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACAGCCAGGCCATGACCCAGGGGAGCCAGCGCTGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR GCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTaGGCCCAGCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGG +
Preference number: 1 (lower is better)
Translates to: IEGMLQGHRSWRAPL*AQLKLGWRLPGSAG
Trigger: CCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR CCA 90 bp GAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAGATCCTaGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGCTC +
Preference number: 1 (lower is better)
Translates to: EREDKIEGMLQGHRS*RAPLCAQLKLGWRL
Trigger: GAGCCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR GCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGGGGCGAGGTGGCATCTaGAGTGCTGGATGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWGRGGI*SAGWAG
Trigger: GCCTGCCCATCCAGCACTGCAGATGCCACCTCGCCC...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR GCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGAGGTGGCATCTGCAGTaGTGGATGGGCAGGCGCATG +
Preference number: 2 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWRWHLQ*WMGRRM
Trigger: CATGCGCCTGCCCATCCAGCACTGCAGATGCCACCT...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR GCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGGGGCGAGGTGGCATCTaGAGTGCTGGATGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRGRGGI*SAGWAG
Trigger: GCCTGCCCATCCAGCACTGCAGATGCCACCTCGCCC...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGCTCCCTGGCAGCGCTaGGTGGGGTGGCAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDAPWQR*VGWQRW
Trigger: CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGC...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCCTGGCAGCGCTGGGTaGGGTGGCAGCGCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQPGSAG*GGSAGS
Trigger: GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGG...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCGGATGGCGGCTCCCTaGCAGCGCTGGGTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQRMAAP*QRWVGW
Trigger: CCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCG...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR GCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGAGGTGGCATCTGCAGTaGTGGATGGGCAGGCGCATG +
Preference number: 2 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRRWHLQ*WMGRRM
Trigger: CATGCGCCTGCCCATCCAGCACTGCAGATGCCACCT...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGATCTGCAGTGCTGGATaGGCAGGCGCATGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: CGLALLLGARRVGATAGGICSAG*AGACGG
Trigger: GCCCCCACATGCGCCTGCCCATCCAGCACTGCAGAT...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp GGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTTGGCATCTGCAGTGCTaGATGGGCAGGCGCATGTGG +
Preference number: 2 (lower is better)
Translates to: GCGLALLLGARRVGATAGWHLQC*MGRRMW
Trigger: CCACATGCGCCTGCCCATCCAGCACTGCAGATGCCA...ACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCGGCTCCCCTGGGTCATaGCCTGGCTGTTCCGGCTGT +
Preference number: 2 (lower is better)
Translates to: RSRECYRATDPGGHLCAPGSPGS*PGCSGC
Trigger: ACAGCCGGAACAGCCAGGCCATGACCCAGGGGAGCC...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR GCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCGGCACTCCTGCTAGGTaGACGGAGGGTGGGAGCGAC +
Preference number: 2 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAGTPAR*TEGGSD
Trigger: GTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCC...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGTGGCTGTTCCGGCTGTaGCCTGGCACTCCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQWLFRL*PGTPAR
Trigger: CCTAGCAGGAGTGCCAGGCCACAGCCGGAACAGCCA...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCAGGTGGGCGAGGTaGCATCTGCAGTGCTGGATG +
Preference number: 2 (lower is better)
Translates to: RSRECYRATDPGGHLCAPSRWAR*HLQCWM
Trigger: CATCCAGCACTGCAGATGCCACCTCGCCCACCTGCT...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGACAGCGCTGGGTGGGGTaGCAGCGCTGGCTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRQRWVG*QRWLPW
Trigger: CCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTG...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACATGGCTGTTCCGGCTGTaGCCTGGCACTCCTGCTAGG +
Preference number: 2 (lower is better)
Translates to: TTAGRNGKTRSRECYRATWLFRL*PGTPAR
Trigger: CCTAGCAGGAGTGCCAGGCCACAGCCGGAACAGCCA...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACTGGCATCTGCAGTGCTaGATGGGCAGGCGCATGTGG +
Preference number: 2 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHWHLQC*MGRRMW
Trigger: CCACATGCGCCTGCCCATCCAGCACTGCAGATGCCA...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAGCTCCCTGGCAGCGCTaGGTGGGGTGGCAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTAPWQR*VGWQRW
Trigger: CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGC...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR-3UTR CCA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAATCTGCAGTGCTGGATaGGCAGGCGCATGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTICSAG*AGACGG
Trigger: GCCCCCACATGCGCCTGCCCATCCAGCACTGCAGAT...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR CCA 72 bp GCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTaGCTCCCCTGGGTCATGGCCTGGCTGTTCCGGCTG +
Preference number: 3 (lower is better)
Translates to: AAPWQRWVGWQR*LPWVMAWLFRL
Trigger: CAGCCGGAACAGCCAGGCCATGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR CCA 72 bp CCAGCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTaGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCATG +
Preference number: 3 (lower is better)
Translates to: PAQARMAAPWQR*VGWQRWLPWVM
Trigger: CATGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR GCA 72 bp AGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTaGAGTGCTGGATGGGCAGGCGCATGTGGGGGCTCC +
Preference number: 3 (lower is better)
Translates to: RVGATAGGRGGI*SAGWAGACGGS
Trigger: GGAGCCCCCACATGCGCCTGCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR CCA 72 bp TGGCTCCCCTGGGTCATGGCCTGGCTGTTCCGGCTGTaGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: WLPWVMAWLFRL*PGTPARCTEGG
Trigger: CCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACAGCCAGGCCATGACCCAGGGGAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
3UTR GCA 72 bp ATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTaGGCCCAGCTCAAGCTCGGATGGCGGCTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: MLQGHRSWRAPL*AQLKLGWRLPG
Trigger: GCCAGGGAGCCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCAACCCTGAAGGCCATGTaGGCGCCGAGGCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSTLKAM*APRLAG
Trigger: CCCCGCCAGCCTCGGCGCGCACATGGCCTTCAGGGT...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS-3UTR CCA 90 bp AAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCAGCGCTGGGTGGGGTaGCAGCGCTGGCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KLGWRLPGSAGWGGSAGSQRWVG*QRWLPW
Trigger: CCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTG...GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCAGCGCTGTGGGGCATaGGGCCTCAGCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWQRCGA*GLSQGL
Trigger: GAGGCCCTGGCTGAGGCCTCATGCCCCACAGCGCTG...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGGTGGGGTGGCAGCGCTaGCTCCCCTGGGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWVGWQR*LPWVMA
Trigger: GGCCATGACCCAGGGGAGCCAGCGCTGCCACCCCAC...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCATGGCGGGCACCTCTGTaGGCCCAGCTCAAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSWRAPL*AQLKLG
Trigger: TCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCA...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGAGCGGGCCCCGACAGTaGGCAGACAGGGATGTGCGG +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWSGPRQ*ADRDVR
Trigger: CCGCACATCCCTGTCTGCCCACTGTCGGGGCCCGCT...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGAGGAGGCTGGGGAGGTaGGGGGTAGGCCCAAGACGC +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWRRLGR*GVGPRR
Trigger: GCGTCTTGGGCCTACCCCCCACCTCCCCAGCCTCCT...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCAGGGAGCGACAGCAGGTaGGCGAGGTGGCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSGSDSR*ARWHLQ
Trigger: CTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCC...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp AAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCAGCAGGCTCTTCTCTaGGCCCGGGGTACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KLGWRLPGSAGWGGSAGSQQALL*ARGTVS
Trigger: GGACACCGTACCCCGGGCTCAGAGAAGAGCCTGCTG...GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGGGGGCTGACTATTGGTaGGAGGAGGCCGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWGADYW*EEAGPQ
Trigger: TTGGGGCCCGGCCTCCTCTCACCAATAGTCAGCCCC...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCATCCGTCCCCACCGGCTaGTGGTTCAGCCATCCGGTA +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSSVPTG*WFSHPV
Trigger: TACCGGATGGCTGAACCAGCAGCCGGTGGGGACGGA...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCAGGTGGTGGGAACTGGTaGTGGCATCCAGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSGGGNW*WHPAGG
Trigger: ACCACCCGCTGGATGCCACCACCAGTTCCCACCACC...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCGGTAACCTTGTGGGCTaGGCAGAGGCGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KLGWRLPGSAGWGGSAGSGNLVG*AEAGVE
Trigger: CTCCACCCCCGCCTCTGCCCAGCCCACAAGGTTACC...GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCATGGCTGTTCCGGCTGTaGCCTGGCACTCCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSWLFRL*PGTPAR
Trigger: CCTAGCAGGAGTGCCAGGCCACAGCCGGAACAGCCA...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGCCACCTCGCAATGCATaGCGCCGGGGCGGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGPPRNA*RRGGAH
Trigger: GTGCGCCCCGCCCCGGCGCCATGCATTGCGAGGTGG...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS-3UTR TCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGGCCCCTTCAGGGGGCTaGCTATTGGTGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWAPSGG*LLVRGG
Trigger: GCCTCCTCTCACCAATAGTCAGCCCCCTGAAGGGGC...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCAAGGTGGCATCTGCAGTaGTGGATGGGCAGGCGCATG +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSRWHLQ*WMGRRM
Trigger: CATGCGCCTGCCCATCCAGCACTGCAGATGCCACCT...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGAGCGGGCCCCGACAGTaGGCAGACAGGGATGTGCGG +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRSGPRQ*ADRDVR
Trigger: CCGCACATCCCTGTCTGCCCACTGTCGGGGCCCGCT...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCCTGGGTGCAGGCCAGTaGCCAGCGGGCCCCGACAGT +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGLGAGQ*PAGPDS
Trigger: ACTGTCGGGGCCCGCTGGCCACTGGCCTGCACCCAG...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGCGGGAGGTCCAGGTCTaGGTGCAGGCCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRREVQV*VQASGQ
Trigger: CTGGCCACTGGCCTGCACCCAGACCTGGACCTCCCG...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCAGGAAGGCGCAGGGGTaGCGAGGCTTCGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGRKAQG*RGFGPG
Trigger: TCCCGGGCCGAAGCCTCGCCACCCCTGCGCCTTCCT...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACACTGCCCTCGGGGAGGTaGGTCTCGGGCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATLPSGR*VSGWRP
Trigger: GGGCCTCCAGCCCGAGACCCACCTCCCCGAGGGCAG...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGAGGAGGCTGGGGAGGTaGGGGGTAGGCCCAAGACGC +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRRRLGR*GVGPRR
Trigger: GCGTCTTGGGCCTACCCCCCACCTCCCCAGCCTCCT...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGAGGTACGTCGTGCGCTaGGGGCAGGAGGCCCGATGC +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRRYVVR*GQEARC
Trigger: GCATCGGGCCTCCTGCCCCCAGCGCACGACGTACCT...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCGTCCCCACCGGCTGCTaGTTCAGCCATCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: KLGWRLPGSAGWGGSAGSVPTGC*FSHPVA
Trigger: TGCTACCGGATGGCTGAACCAGCAGCCGGTGGGGAC...GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGGTGGGGTGGCAGCGCTaGCTCCCCTGGGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGVGWQR*LPWVMA
Trigger: GGCCATGACCCAGGGGAGCCAGCGCTGCCACCCCAC...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGCAGGGCCACAGATCCTaGCGGGCACCTCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRQGHRS*RAPLCA
Trigger: GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTG...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGAGGTCCAGGTCTGGGTaGAGGCCAGTGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGRSRSG*RPVASG
Trigger: CCCGCTGGCCACTGGCCTGCACCCAGACCTGGACCT...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAATGGCTGTCCGTCGATaGAGGGCCAGGCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATMAVRR*RARPGP
Trigger: CGGGCCCGGCCTGGCCCTGCATCGACGGACAGCCAT...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCATCATCCGCGGGTTCCTaGTTCAGGAAGCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSSSAGS*FRKLAF
Trigger: GAAGGCGAGCTTCCTGAAGCAGGAACCCGCGGATGA...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCTGCTGCTCATAGGCTaGACAGCAGTCCACCCAGCG +
Preference number: 4 (lower is better)
Translates to: KLGWRLPGSAGWGGSAGSLLLIG*TAVHPA
Trigger: CGCTGGGTGGACTGCTGTGCAGCCTATGAGCAGCAG...GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCCGTAGTCTCGGGGACTaGGGGGCCGGAGGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGRSLGD*GAGGGR
Trigger: ACGACCTCCTCCGGCCCCGCAGTCCCCGAGACTACG...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS-3UTR CCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCAGGTGGGTCTCGGGCTaGAGGCCCAGGCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGRWVSG*RPRPEL
Trigger: CAGCTCTGGCCTGGGCCTCCAGCCCGAGACCCACCT...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGTCCTCGCCCTTGCGCTaGTCGATGTGGCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWSSPLR*SMWLFS
Trigger: CGAGAAGAGCCACATCGACCAGCGCAAGGGCGAGGA...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGGGTGCGCTGGTGCTTaGCGCGGTCGCTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWGCAGA*RGRWSC
Trigger: GCAACTCCAGCGACCGCGCCAAGCACCAGCGCACCC...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGGATGGTGGTGGGAACTaGTGGTGGCATCCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWDGGGN*WWHPAG
Trigger: ACCCGCTGGATGCCACCACCAGTTCCCACCACCATC...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGGCCCTGGTAACCTTGTaGGCTGGGCAGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGALVTL*AGQRRG
Trigger: CCCCCGCCTCTGCCCAGCCCACAAGGTTACCAGGGC...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGCAGCTCAAGCTCGGATaGCGGCTCCCTGGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRQLKLG*RLPGSA
Trigger: AGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGCTG...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCAGGGCCACAGATCCTaGCGGGCACCTCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGQGHRS*RAPLCA
Trigger: GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTG...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGGAGGTTCTCCAGCCGTaGGAAGGCCTTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWREVLQP*EGLAAA
Trigger: GGCTGCAGCAAGGCCTTCTCACGGCTGGAGAACCTC...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCATCCTCAGGTGGATCTTaGGGTTCTCCAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSSSGGS*GSPAVR
Trigger: TCTCACGGCTGGAGAACCTCAAGATCCACCTGAGGA...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGCTGAATGGGCCTTaGCGTGCTTGCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRWLNGP*RACGGS
Trigger: GCTCCCTCCGCAAGCACGTCAAGGCCCATTCAGCCA...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGGGATGTGCGGGCCTCTaGCATGGCTTGGTAGTCGGG +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRGCAGL*HGLVVG
Trigger: CCCGACTACCAAGCCATGGCAGAGGCCCGCACATCC...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCGGCAGGCTTCAAGTTaGAAGCTGCCCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWRQASS*KLPSWL
Trigger: CAGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCG...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACACTGGAAGGTACGTCGTaGGCTGGGGGCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATLEGTS*AGGRRP
Trigger: GGGCCTCCTGCCCCCAGCGCACGACGTACCTTCCAG...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGGCATCCAGCGGGTGGTaGCTGGAAGGTACGTCGTGC +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRASSGW*LEGTSC
Trigger: GCACGACGTACCTTCCAGGCACCACCCGCTGGATGC...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGCCAACCCATCCCGGGTaGTCTCAGCCATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRPTHPG*SQPWAE
Trigger: CTCTGCCCATGGCTGAGAGCACCCGGGATGGGTTGG...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGGCACTCCTGCTAGGTaGACGGAGGGTGGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWGTPAR*TEGGSD
Trigger: GTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCC...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCGGCCCAGGCCAGAGCTaGGTTCGCTGCCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGGPGQS*VRCPEG
Trigger: ACCTTCTGGGCAGCGAACCCAGCTCTGGCCTGGGCC...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGGGCTTCGTGTCTAGGTaGGTGCGCTGGTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRGFVSR*VRWCLA
Trigger: CGCCAAGCACCAGCGCACCCACCTAGACACGAAGCC...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGCCAGCGGGTGGTGCCTaGAAGGTACGTCGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWPAGGA*KVRRAL
Trigger: CAGCGCACGACGTACCTTCCAGGCACCACCCGCTGG...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGGTAACCTTGTGGGCTaGGCAGAGGCGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWGNLVG*AEAGVE
Trigger: CTCCACCCCCGCCTCTGCCCAGCCCACAAGGTTACC...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGAGGGGGTTGAAACCGTaGGTCTCCCCGACCAGTCCG +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRRGLKP*VSPTSP
Trigger: CGGACTGGTCGGGGAGACCCACGGTTTCAACCCCCT...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGGCTGTGGCAGCGCTGTaGGGCATGAGGCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGAVAAL*GMRPQP
Trigger: TGGCTGAGGCCTCATGCCCCACAGCGCTGCCACAGC...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGGCTGTGGCAGCGCTGTaGGGCATGAGGCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGAVAAL*GMRPQP
Trigger: TGGCTGAGGCCTCATGCCCCACAGCGCTGCCACAGC...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGATCTGCAGTGCTGGATaGGCAGGCGCATGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRICSAG*AGACGG
Trigger: GCCCCCACATGCGCCTGCCCATCCAGCACTGCAGAT...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCGGCTCCCCTGGGTCATaGCCTGGCTGTTCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGGSPGS*PGCSGC
Trigger: ACAGCCGGAACAGCCAGGCCATGACCCAGGGGAGCC...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCACAGCGCTGGGTGGGGTaGCAGCGCTGGCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPQRWVG*QRWLPW
Trigger: CCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTG...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCCGGATGGCGGCTCCCTaGCAGCGCTGGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPRMAAP*QRWVGW
Trigger: CCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCG...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTCAGCTCAAGCTCGGATaGCGGCTCCCTGGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: GCGLALLLGARRVGATAGQLKLG*RLPGSA
Trigger: AGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGCTG...ACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCGGCGGCGGCCTTGGATaGACCGTAGTCTCGGGGACT +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGGGGLG*TVVSGT
Trigger: AGTCCCCGAGACTACGGTCCATCCAAGGCCGCCGCC...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS-3UTR TCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACACAGCAGGCTCTTCTCTaGGCCCGGGGTACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATQQALL*ARGTVS
Trigger: GGACACCGTACCCCGGGCTCAGAGAAGAGCCTGCTG...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGGCTTGTAGCGGGCGTTaGAGGGCTTGTAGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGACSGR*RACSGA
Trigger: TGCGCCGCTACAAGCCCTTCAACGCCCGCTACAAGC...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCGGTCGCTGGAGTTGCTaGAGGCCTTCTGGCAACCCG +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGGRWSC*RPSGNP
Trigger: CGGGTTGCCAGAAGGCCTTCAGCAACTCCAGCGACC...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp AAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCTGCTGCTCTTTGGCTaGATGGGCCTTGACGTGCTT +
Preference number: 4 (lower is better)
Translates to: KLGWRLPGSAGWGGSAGSLLLFG*MGLDVL
Trigger: AAGCACGTCAAGGCCCATTCAGCCAAAGAGCAGCAG...GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGGGCGGTGGGCTTCCTaGAGGGAGAAACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATGRWAS*REKQAL
Trigger: CAGGGCCTGTTTCTCCCTGCAGGAAGCCCACCGCCC...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGTCAGGGTGGGGGAAATaGAGCAGCCTCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWSGWGK*SSLSQA
Trigger: AGCTTGTGAGAGGCTGCTGCATTTCCCCCACCCTGA...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAAGCACCGCTTCAGGCTaGCCTCGGGGAGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATSTASG*PRGGGS
Trigger: AGACCCACCTCCCCGAGGGCAGCCTGAAGCGGTGCT...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTTCAAGTTGCAAGCTaGCCTCATGGCTGTCCGTCG +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWLQVAS*PHGCPS
Trigger: CGACGGACAGCCATGAGGGCAGCTTGCAACTTGAAG...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGTCGTGTCTAGGTGGGTaGGCTGGTGCTTGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGSCLGG*AGAWRG
Trigger: ACCGCGCCAAGCACCAGCGCACCCACCTAGACACGA...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGGCATCCAGCGGGTGGTaGCTGGAAGGTACGTCGTGC +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGASSGW*LEGTSC
Trigger: GCACGACGTACCTTCCAGGCACCACCCGCTGGATGC...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCCAACCCATCCCGGGTaGTCTCAGCCATGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGPTHPG*SQPWAE
Trigger: CTCTGCCCATGGCTGAGAGCACCCGGGATGGGTTGG...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGAGGTGGCATCTGCAGTaGTGGATGGGCAGGCGCATG +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRRWHLQ*WMGRRM
Trigger: CATGCGCCTGCCCATCCAGCACTGCAGATGCCACCT...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGGGCGAGGTGGCATCTaGAGTGCTGGATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATGRGGI*SAGWAG
Trigger: GCCTGCCCATCCAGCACTGCAGATGCCACCTCGCCC...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGTCAGCCACCTCGCAATaGATGGCGCCGGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQSATSQ*MAPGRG
Trigger: GCCCCGCCCCGGCGCCATGCATTGCGAGGTGGCTGA...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS-3UTR CCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGTGCGGGCCTCTGCCATaGCTTGGTAGTCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWCGPLP*LGSRAR
Trigger: CCTTGCCCGACTACCAAGCCATGGCAGAGGCCCGCA...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGGCCCAGGCCAGAGCTaGGTTCGCTGCCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATGPGQS*VRCPEG
Trigger: ACCTTCTGGGCAGCGAACCCAGCTCTGGCCTGGGCC...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGTGGCATCCAGCGGGTaGTGCCTGGAAGGTACGTCG +
Preference number: 4 (lower is better)
Translates to: GCGLALLLGARRVGATAGVASSG*CLEGTS
Trigger: CGACGTACCTTCCAGGCACCACCCGCTGGATGCCAC...ACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGGGTAGGACGGCTTGCTaGGGAGTGTGGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGGRTAC*GVWGRA
Trigger: AGCCCTTCCCCACACTCCCCAGCAAGCCGTCCTACC...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGAGGGCTCTGGAAGGGTaGGTAGGACGGCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWRALEG*VGRLAG
Trigger: CCCAGCAAGCCGTCCTACCCACCCTTCCAGAGCCCT...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGAGGGGGTTGAAACCGTaGGTCTCCCCGACCAGTCCG +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGRGLKP*VSPTSP
Trigger: CGGACTGGTCGGGGAGACCCACGGTTTCAACCCCCT...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCATCACAAGCTTGGGGGTaGGCCCGGGGCGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPSQAWG*ARGGGL
Trigger: AAGCCCACCGCCCCGGGCTCACCCCCAAGCTTGTGA...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGCAGAGCTGGGTTCGCTaGCCAGAAGGTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRQSWVR*PEGSRK
Trigger: CTTCCTGCTACCTTCTGGGCAGCGAACCCAGCTCTG...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGGACGTGTGGAGCTGCTaGAGGACCAGACACTCGGTC +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGDVWSC*RTRHSV
Trigger: GACCGAGTGTCTGGTCCTGCAGCAGCTCCACACGTC...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGACGTGTGGAGCTGCTaGAGGACCAGACACTCGGTC +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWDVWSC*RTRHSV
Trigger: GACCGAGTGTCTGGTCCTGCAGCAGCTCCACACGTC...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGTGCAAGCTGCCCTCATaGCTGTCCGTCGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGCKLPS*LSVDAG
Trigger: CCCTGCATCGACGGACAGCCATGAGGGCAGCTTGCA...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGTCCTCGCCCTTGCGCTaGTCGATGTGGCTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGSSPLR*SMWLFS
Trigger: CGAGAAGAGCCACATCGACCAGCGCAAGGGCGAGGA...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGGTACGTCGTGCGCTaGGGGCAGGAGGCCCGATGC +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPRYVVR*GQEARC
Trigger: GCATCGGGCCTCCTGCCCCCAGCGCACGACGTACCT...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGGATGGTGGTGGGAACTaGTGGTGGCATCCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGDGGGN*WWHPAG
Trigger: ACCCGCTGGATGCCACCACCAGTTCCCACCACCATC...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGGGGTGCTCTCAGCCATaGGCAGAGGGGACAGATGGT +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGGCSQP*AEGTDG
Trigger: ACCATCTGTCCCCTCTGCCCATGGCTGAGAGCACCC...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCGGAAGCAACTCTGGATaGAGTGGAAACTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: KLGWRLPGSAGWGGSAGSGSNSG*SGNCPG
Trigger: ACCAGGGCAGTTTCCACTCCATCCAGAGTTGCTTCC...GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGATGTGGCCCAGGCAGTaGTCAAAGGCTCCATTGGGG +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRMWPRQ*SKAPLG
Trigger: CCCCAATGGAGCCTTTGACCACTGCCTGGGCCACAT...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGTGGCATCTGCAGTGCTaGATGGGCAGGCGCATGTGG +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWWHLQC*MGRRMW
Trigger: CCACATGCGCCTGCCCATCCAGCACTGCAGATGCCA...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGAGCAGGTGGGCGAGGTaGCATCTGCAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWSRWAR*HLQCWM
Trigger: CATCCAGCACTGCAGATGCCACCTCGCCCACCTGCT...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCGGCGGCGGCGGCCTTaGATGGACCGTAGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCARRRRP*MDRSLG
Trigger: CCCGAGACTACGGTCCATCCAAGGCCGCCGCCGCCG...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS-3UTR TCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGGTCCATTTACACAGGTaGCCAGAGACGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRVHLHR*PETSGR
Trigger: CCTCCCAGACGTCTCTGGTCACCTGTGTAAATGGAC...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGAGGCCCAAAGAGCTCTaGAAACTCATCCGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRRPKEL*KLIRGF
Trigger: GAACCCGCGGATGAGTTTTCAGAGCTCTTTGGGCCT...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGGTGTGGTTGGGAGGCTaGCGTTCACATACGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGVWLGG*RSHTWP
Trigger: AGGCCACGTATGTGAACGGCAGCCTCCCAACCACAC...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCAGGTCCAGGTCTGGGTaGAGGCCAGTGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCARSRSG*RPVASG
Trigger: CCCGCTGGCCACTGGCCTGCACCCAGACCTGGACCT...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCACCGCTTCAGGCTaGCCTCGGGGAGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPSTASG*PRGGGS
Trigger: AGACCCACCTCCCCGAGGGCAGCCTGAAGCGGTGCT...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGCGGCAGGCTTCAAGTTaGAAGCTGCCCTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGRQASS*KLPSWL
Trigger: CAGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCG...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACATTCTGGCAACCCGGGTaGTGGCACAGGTACGGCTTC +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATFWQPG*WHRYGF
Trigger: GAAGCCGTACCTGTGCCAGCACCCGGGTTGCCAGAA...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GCTCAAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGAGCTTCTTACGCACCTaGTGCTCTTTGGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: AQARMAAPWQRWVGWQRWSFLRT*CSLAEW
Trigger: CCATTCAGCCAAAGAGCAGCAGGTGCGTAAGAAGCT...CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCTGGAAGGTACGTCGTaGGCTGGGGGCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCALEGTS*AGGRRP
Trigger: GGGCCTCCTGCCCCCAGCGCACGACGTACCTTCCAG...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGGGATGGAGTGGAAACTaGCCTGGTAACCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRGWSGN*PGNLVG
Trigger: GCCCACAAGGTTACCAGGGCAGTTTCCACTCCATCC...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGGGGCGAGGTGGCATCTaGAGTGCTGGATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQGRGGI*SAGWAG
Trigger: GCCTGCCCATCCAGCACTGCAGATGCCACCTCGCCC...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCGGCACTCCTGCTAGGTaGACGGAGGGTGGGAGCGAC +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPGTPAR*TEGGSD
Trigger: GTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCC...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCCTCTTGTCCGAGTGTaGCTCAGCCACCTCGCAATG +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGPLVRV*LSHLAM
Trigger: CATTGCGAGGTGGCTGAGGCACACTCGGACAAGAGG...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS-3UTR CCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCGTGAGCCCGGGGCGGTaGGCTTCCTGCAGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPVSPGR*ASCREK
Trigger: TTTCTCCCTGCAGGAAGCCCACCGCCCCGGGCTCAC...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGGTGAGCCCGGGGCGGTaGGCTTCCTGCAGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQVSPGR*ASCREK
Trigger: TTTCTCCCTGCAGGAAGCCCACCGCCCCGGGCTCAC...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACCTGCCCTCGGGGAGGTaGGTCTCGGGCTGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHLPSGR*VSGWRP
Trigger: GGGCCTCCAGCCCGAGACCCACCTCCCCGAGGGCAG...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGCCAGGATACACACCTaGGAGCAGCTCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDARIHT*EQLLAQ
Trigger: CTGGGCCAGGAGCTGCTCCCAGGTGTGTATCCTGGC...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCACCAGCGGGTGGTGCCTaGAAGGTACGTCGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPPAGGA*KVRRAL
Trigger: CAGCGCACGACGTACCTTCCAGGCACCACCCGCTGG...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCGGTGGGAACTGGTGGTaGCATCCAGCGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPGGNWW*HPAGGA
Trigger: GGCACCACCCGCTGGATGCCACCACCAGTTCCCACC...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGGGGACAGATGGTGGTaGGAACTGGTGGTGGCATCC +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATGDRWW*ELVVAS
Trigger: GGATGCCACCACCAGTTCCCACCACCATCTGTCCCC...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGTAGGACGGCTTGCTaGGGAGTGTGGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDGRTAC*GVWGRA
Trigger: AGCCCTTCCCCACACTCCCCAGCAAGCCGTCCTACC...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATAGGGCTCTGGAAGGGTaGGTAGGACGGCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDRALEG*VGRLAG
Trigger: CCCAGCAAGCCGTCCTACCCACCCTTCCAGAGCCCT...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCGCCCTGGTAACCTTGTaGGCTGGGCAGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAALVTL*AGQRRG
Trigger: CCCCCGCCTCTGCCCAGCCCACAAGGTTACCAGGGC...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGAGTCCTCGGGGCCGCTaGACACCACATCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWSPRGR*TPHLQM
Trigger: CATCTGAAGATGTGGTGTCCAGCGGCCCCGAGGACT...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGATGTGGCCCAGGCAGTaGTCAAAGGCTCCATTGGGG +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGMWPRQ*SKAPLG
Trigger: CCCCAATGGAGCCTTTGACCACTGCCTGGGCCACAT...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGAGGTGTCTGTGTAGATaGAGGGGATGTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGRCLCR*RGCGPG
Trigger: GCCTGGGCCACATCCCCTCCATCTACACAGACACCT...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACACCTGGCAGCGCTGGGTaGGGTGGCAGCGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATPGSAG*GGSAGS
Trigger: GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGG...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAGCTCCCTGGCAGCGCTaGGTGGGGTGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATAPWQR*VGWQRW
Trigger: CCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGC...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCGGCCTGGGGTCTAGGTaGCCTGTCAGGGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAGLGSR*PVRVGE
Trigger: TTCCCCCACCCTGACAGGTCACCTAGACCCCAGGCC...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTTGTAGCGGGCGTTaGAGGGCTTGTAGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPACSGR*RACSGA
Trigger: TGCGCCGCTACAAGCCCTTCAACGCCCGCTACAAGC...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGCACTCGCATGTGGATaGGCAGCTTGTAGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDALACG*AACSGR
Trigger: ACGCCCGCTACAAGCTGCTCATCCACATGCGAGTGC...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCGGTCGCTGGAGTTGCTaGAGGCCTTCTGGCAACCCG +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPGRWSC*RPSGNP
Trigger: CGGGTTGCCAGAAGGCCTTCAGCAACTCCAGCGACC...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGGAGCAGCCAGGGATCTaGCAGGCGTACGGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQEQPGI*QAYGFV
Trigger: CACGAAGCCGTACGCCTGTCAGATCCCTGGCTGCTC...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCGAGCAGCCAGGGATCTaGCAGGCGTACGGCTTCGTG +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPEQPGI*QAYGFV
Trigger: CACGAAGCCGTACGCCTGTCAGATCCCTGGCTGCTC...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCGGGGCTGACTATTGGTaGGAGGAGGCCGGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAGADYW*EEAGPQ
Trigger: TTGGGGCCCGGCCTCCTCTCACCAATAGTCAGCCCC...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCGGGCGGTGGGCTTCCTaGAGGGAGAAACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAGRWAS*REKQAL
Trigger: CAGGGCCTGTTTCTCCCTGCAGGAAGCCCACCGCCC...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAATGGCTGTCCGTCGATaGAGGGCCAGGCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATMAVRR*RARPGP
Trigger: CGGGCCCGGCCTGGCCCTGCATCGACGGACAGCCAT...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATTTCTGGCAACCCGGGTaGTGGCACAGGTACGGCTTC +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDFWQPG*WHRYGF
Trigger: GAAGCCGTACCTGTGCCAGCACCCGGGTTGCCAGAA...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCATCGTGTCTAGGTGGGTaGGCTGGTGCTTGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPSCLGG*AGAWRG
Trigger: ACCGCGCCAAGCACCAGCGCACCCACCTAGACACGA...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGTTCTTACGCACCTGCTaGTCTTTGGCTGAATGGGCC +
Preference number: 4 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRFLRTC*SLAEWA
Trigger: GGCCCATTCAGCCAAAGAGCAGCAGGTGCGTAAGAA...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGTGGGTAGGACGGCTTaGTGGGGAGTGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPVGRTA*WGVWGR
Trigger: CCTTCCCCACACTCCCCAGCAAGCCGTCCTACCCAC...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGTCCGTCCCCACCGGCTaGTGGTTCAGCCATCCGGTA +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQSVPTG*WFSHPV
Trigger: TACCGGATGGCTGAACCAGCAGCCGGTGGGGACGGA...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCTGGCGGGCACCTCTGTaGGCCCAGCTCAAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAWRAPL*AQLKLG
Trigger: TCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCA...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACCTGGGTGCAGGCCAGTaGCCAGCGGGCCCCGACAGT +
Preference number: 4 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHLGAGQ*PAGPDS
Trigger: ACTGTCGGGGCCCGCTGGCCACTGGCCTGCACCCAG...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAGGAAGGCGCAGGGGTaGCGAGGCTTCGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHRKAQG*RGFGPG
Trigger: TCCCGGGCCGAAGCCTCGCCACCCCTGCGCCTTCCT...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTTGCTCTTTGGCTGAATaGGCCTTGACGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GCGLALLLGARRVGATAGCSLAE*ALTCLR
Trigger: CCGCAAGCACGTCAAGGCCCATTCAGCCAAAGAGCA...ACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGTGCTCTTTGGCTGAATaGGCCTTGACGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGCSLAE*ALTCLR
Trigger: CCGCAAGCACGTCAAGGCCCATTCAGCCAAAGAGCA...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGGATGCAAGTCCGTTATaGGGGGTGATGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGWERQQVGEVASAVLDGDASPL*GVMEPG
Trigger: TCCTGGCTCCATCACCCCCCATAACGGACTTGCATC...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGTGGCATCCAGCGGGTaGTGCCTGGAAGGTACGTCG +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPVASSG*CLEGTS
Trigger: CGACGTACCTTCCAGGCACCACCCGCTGGATGCCAC...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGTCCCCACCGGCTGCTaGTTCAGCCATCCGGTAGCA +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPVPTGC*FSHPVA
Trigger: TGCTACCGGATGGCTGAACCAGCAGCCGGTGGGGAC...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCATCTGCAGTGCTGGATaGGCAGGCGCATGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPICSAG*AGACGG
Trigger: GCCCCCACATGCGCCTGCCCATCCAGCACTGCAGAT...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCATGGCTGTTCCGGCTGTaGCCTGGCACTCCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPWLFRL*PGTPAR
Trigger: CCTAGCAGGAGTGCCAGGCCACAGCCGGAACAGCCA...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCACTCGCATGTGGATaGGCAGCTTGTAGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPALACG*AACSGR
Trigger: ACGCCCGCTACAAGCTGCTCATCCACATGCGAGTGC...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGTGTGGTTGGGAGGCTaGCGTTCACATACGTGGCCT +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDVWLGG*RSHTWP
Trigger: AGGCCACGTATGTGAACGGCAGCCTCCCAACCACAC...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCTTCTTACGCACCTGCTaGTCTTTGGCTGAATGGGCC +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGFLRTC*SLAEWA
Trigger: GGCCCATTCAGCCAAAGAGCAGCAGGTGCGTAAGAA...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCGTGGGTAGGACGGCTTaGTGGGGAGTGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAVGRTA*WGVWGR
Trigger: CCTTCCCCACACTCCCCAGCAAGCCGTCCTACCCAC...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGTTCACATACGTGGCCTaGGGTCTAGGTGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWFTYVA*GLGDLS
Trigger: TGACAGGTCACCTAGACCCCAGGCCACGTATGTGAA...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGGGGGACAGATGGTGGTaGGAACTGGTGGTGGCATCC +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQGDRWW*ELVVAS
Trigger: GGATGCCACCACCAGTTCCCACCACCATCTGTCCCC...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGGGTGCTCTCAGCCATaGGCAGAGGGGACAGATGGT +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPGCSQP*AEGTDG
Trigger: ACCATCTGTCCCCTCTGCCCATGGCTGAGAGCACCC...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATAGTCCTCGGGGCCGCTaGACACCACATCTTCAGATG +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDSPRGR*TPHLQM
Trigger: CATCTGAAGATGTGGTGTCCAGCGGCCCCGAGGACT...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATAGGTGTCTGTGTAGATaGAGGGGATGTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDRCLCR*RGCGPG
Trigger: GCCTGGGCCACATCCCCTCCATCTACACAGACACCT...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGTGGCATCTGCAGTGCTaGATGGGCAGGCGCATGTGG +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQWHLQC*MGRRMW
Trigger: CCACATGCGCCTGCCCATCCAGCACTGCAGATGCCA...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAGGCCTGGGGTCTAGGTaGCCTGTCAGGGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATGLGSR*PVRVGE
Trigger: TTCCCCCACCCTGACAGGTCACCTAGACCCCAGGCC...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCGCAAGGACTCCTGTTTaGTGTGTTGTGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGARTPV*CVVWLG
Trigger: TCCCAACCACACAACACATCAAACAGGAGTCCTTGC...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGTGAGAAGGCCTTGCTaGAGCCTTCAAACATGCACT +
Preference number: 4 (lower is better)
Translates to: GCGLALLLGARRVGATAGVRRPC*SLQTCT
Trigger: AGTGCATGTTTGAAGGCTGCAGCAAGGCCTTCTCAC...ACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGCCGTGAGAAGGCCTTaGTGCAGCCTTCAAACATGC +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDAVRRP*CSLQTC
Trigger: GCATGTTTGAAGGCTGCAGCAAGGCCTTCTCACGGC...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCGTGGACGTGTGGAGCTaGTGCAGGACCAGACACTCG +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAVDVWS*CRTRHS
Trigger: CGAGTGTCTGGTCCTGCAGCAGCTCCACACGTCCAC...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAACATCTTCAGATGGCTaGTGTGGCAGCGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPTSSDG*CGSAVG
Trigger: CCCCACAGCGCTGCCACAGCAGCCATCTGAAGATGT...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAGGTGGGAACTGGTGGTaGCATCCAGCGGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATGGNWW*HPAGGA
Trigger: GGCACCACCCGCTGGATGCCACCACCAGTTCCCACC...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACGGGAGCGACAGCAGGTaGGCGAGGTGGCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHGSDSR*ARWHLQ
Trigger: CTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCC...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAGGCTCCCCTGGGTCATaGCCTGGCTGTTCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATGSPGS*PGCSGC
Trigger: ACAGCCGGAACAGCCAGGCCATGACCCAGGGGAGCC...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGACCTGGCAGCGCTGGGTaGGGTGGCAGCGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRPGSAG*GGSAGS
Trigger: GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGG...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp TGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCCTGGGTCATTCAAGTTACAAGACTaGCTGCTTTTTGGCATTTAC +
Preference number: 4 (lower is better)
Translates to: WRLPGSAGWGGSAGSPGSFKLQD*LLFGIY
Trigger: GTAAATGCCAAAAAGCAGTCAGTCTTGTAACTTGAA...TGACCCAGGGGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS-3UTR TCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAGAGGTTCTCCAGCCGTaGGAAGGCCTTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATEVLQP*EGLAAA
Trigger: GGCTGCAGCAAGGCCTTCTCACGGCTGGAGAACCTC...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCATCCTCAGGTGGATCTTaGGGTTCTCCAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPSSGGS*GSPAVR
Trigger: TCTCACGGCTGGAGAACCTCAAGATCCACCTGAGGA...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTGCTGCTCTTTGGCTaGATGGGCCTTGACGTGCTT +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQLLLFG*MGLDVL
Trigger: AAGCACGTCAAGGCCCATTCAGCCAAAGAGCAGCAG...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAACTTTCTATGAGGGATaGGCTAGCCTTCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CSGCGLALLLGARRVGATTFYEG*ASLPRP
Trigger: AGGCCTTGGAAGGCTAGCGCATCCCTCATAGAAAGT...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS-3UTR GCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACGGATGTGCGGGCCTCTaGCATGGCTTGGTAGTCGGG +
Preference number: 4 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHGCAGL*HGLVVG
Trigger: CCCGACTACCAAGCCATGGCAGAGGCCCGCACATCC...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCACTTCAAGTTGCAAGCTaGCCTCATGGCTGTCCGTCG +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPLQVAS*PHGCPS
Trigger: CGACGGACAGCCATGAGGGCAGCTTGCAACTTGAAG...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGGATGGAGTGGAAACTaGCCTGGTAACCTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPGWSGN*PGNLVG
Trigger: GCCCACAAGGTTACCAGGGCAGTTTCCACTCCATCC...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCACATCTTCAGATGGCTaGTGTGGCAGCGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCATSSDG*CGSAVG
Trigger: CCCCACAGCGCTGCCACAGCAGCCATCTGAAGATGT...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACATGCGGGCCTCTGCCATaGCTTGGTAGTCGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATCGPLP*LGSRAR
Trigger: CCTTGCCCGACTACCAAGCCATGGCAGAGGCCCGCA...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGGATGCAAGTCCGTTATaGGGGGTGATGGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQDASPL*GVMEPG
Trigger: TCCTGGCTCCATCACCCCCCATAACGGACTTGCATC...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACGGTGGTGGGAACTGGTaGTGGCATCCAGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHGGGNW*WHPAGG
Trigger: ACCACCCGCTGGATGCCACCACCAGTTCCCACCACC...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGTCAAAGGCTCCATTaGGGAAGAAGCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDGQRLH*GRSHSP
Trigger: AGGACTGTGGCTTCTTCCCCAATGGAGCCTTTGACC...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCTCAGGGTGGGGGAAATaGAGCAGCCTCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCASGWGK*SSLSQA
Trigger: AGCTTGTGAGAGGCTGCTGCATTTCCCCCACCCTGA...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACACTGCTGCTCATAGGCTaGACAGCAGTCCACCCAGCG +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATLLLIG*TAVHPA
Trigger: CGCTGGGTGGACTGCTGTGCAGCCTATGAGCAGCAG...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACGTGGACGTGTGGAGCTaGTGCAGGACCAGACACTCG +
Preference number: 4 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHVDVWS*CRTRHS
Trigger: CGAGTGTCTGGTCCTGCAGCAGCTCCACACGTCCAC...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGATGTGTTGTGTGGTTaGGAGGCTGCCGTTCACATA +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDDVLCG*EAAVHI
Trigger: TATGTGAACGGCAGCCTCCCAACCACACAACACATC...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGACGGGAGGTCCAGGTCTaGGTGCAGGCCAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRREVQV*VQASGQ
Trigger: CTGGCCACTGGCCTGCACCCAGACCTGGACCTCCCG...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAAGGTGGGTCTCGGGCTaGAGGCCCAGGCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRRWVSG*RPRPEL
Trigger: CAGCTCTGGCCTGGGCCTCCAGCCCGAGACCCACCT...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGTGCGCTGGTGCTTaGCGCGGTCGCTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRGCAGA*RGRWSC
Trigger: GCAACTCCAGCGACCGCGCCAAGCACCAGCGCACCC...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAATGGGCAGGCGCATGTaGGGGCTCCTTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATMGRRM*GLLQVS
Trigger: AGACACCTGAAGGAGCCCCCACATGCGCCTGCCCAT...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACACGGATGGCGGCTCCCTaGCAGCGCTGGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTRMAAP*QRWVGW
Trigger: CCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCG...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCGCAAGGACTCCTGTTTaGTGTGTTGTGTGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPARTPV*CVVWLG
Trigger: TCCCAACCACACAACACATCAAACAGGAGTCCTTGC...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACACAGCGCTGTGGGGCATaGGGCCTCAGCCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTQRCGA*GLSQGL
Trigger: GAGGCCCTGGCTGAGGCCTCATGCCCCACAGCGCTG...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATTATACACGAGGTCTGTaGTTTCAAAACCACTGCGGG +
Preference number: 4 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDYTRGL*FQNHCG
Trigger: CCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATA...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACACAGAGCTGGGTTCGCTaGCCAGAAGGTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATQSWVR*PEGSRK
Trigger: CTTCCTGCTACCTTCTGGGCAGCGAACCCAGCTCTG...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTTCTTACGCACCTaGTGCTCTTTGGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPSFLRT*CSLAEW
Trigger: CCATTCAGCCAAAGAGCAGCAGGTGCGTAAGAAGCT...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCTTCACATACGTGGCCTaGGGTCTAGGTGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAFTYVA*GLGDLS
Trigger: TGACAGGTCACCTAGACCCCAGGCCACGTATGTGAA...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCGATGTGTTGTGTGGTTaGGAGGCTGCCGTTCACATA +
Preference number: 4 (lower is better)
Translates to: RSRECYRATDPGGHLCAPDVLCG*EAAVHI
Trigger: TATGTGAACGGCAGCCTCCCAACCACACAACACATC...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGAGCTTCTTATTCAGATaGAGAAATTCAACCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGSFLFR*RNSTRW
Trigger: CCACCTGGTTGAATTTCTTCATCTGAATAAGAAGCT...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS-3UTR TCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGCCCCTTCAGGGGGCTaGCTATTGGTGAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRAPSGG*LLVRGG
Trigger: GCCTCCTCTCACCAATAGTCAGCCCCCTGAAGGGGC...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGTATACACGAGGTCTGTaGTTTCAAAACCACTGCGGG +
Preference number: 4 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQYTRGL*FQNHCG
Trigger: CCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATA...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGAGAAATTCAACCAGGTaGTACCACCAAAACATCATG +
Preference number: 4 (lower is better)
Translates to: CGLALLLGARRVGATAGGRNSTR*YHQNIM
Trigger: CATGATGTTTTGGTGGTACCACCTGGTTGAATTTCT...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGCTTCGTGTCTAGGTaGGTGCGCTGGTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRGFVSR*VRWCLA
Trigger: CGCCAAGCACCAGCGCACCCACCTAGACACGAAGCC...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGATGCAAGCTGCCCTCATaGCTGTCCGTCGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRCKLPS*LSVDAG
Trigger: CCCTGCATCGACGGACAGCCATGAGGGCAGCTTGCA...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAATGGGCAGGCGCATGTaGGGGCTCCTTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRMGRRM*GLLQVS
Trigger: AGACACCTGAAGGAGCCCCCACATGCGCCTGCCCAT...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAAGCAGGTGGGCGAGGTaGCATCTGCAGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRSRWAR*HLQCWM
Trigger: CATCCAGCACTGCAGATGCCACCTCGCCCACCTGCT...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACATGGCTGAATGGGCCTTaGCGTGCTTGCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTWLNGP*RACGGS
Trigger: GCTCCCTCCGCAAGCACGTCAAGGCCCATTCAGCCA...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACACCCACTCCGAGTCCATaGGCACAATCTACAATTCCT +
Preference number: 4 (lower is better)
Translates to: TTAGRNGKTRSRECYRATPTPSP*AQSTIP
Trigger: AGGAATTGTAGATTGTGCGCATGGACTCGGAGTGGG...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS-3UTR GCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACGTGAGAAGGCCTTGCTaGAGCCTTCAAACATGCACT +
Preference number: 4 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHVRRPC*SLQTCT
Trigger: AGTGCATGTTTGAAGGCTGCAGCAAGGCCTTCTCAC...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGTCCATTTACACAGGTaGCCAGAGACGTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRVHLHR*PETSGR
Trigger: CCTCCCAGACGTCTCTGGTCACCTGTGTAAATGGAC...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGCCGTGAGAAGGCCTTaGTGCAGCCTTCAAACATGC +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRAVRRP*CSLQTC
Trigger: GCATGTTTGAAGGCTGCAGCAAGGCCTTCTCACGGC...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAACCACCAAAACATCATaGCTTACTGTCCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRTTKTS*LTVHRP
Trigger: GGGGCGGTGGACAGTAAGTCATGATGTTTTGGTGGT...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS-3UTR GCA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACATCATCCGCGGGTTCCTaGTTCAGGAAGCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTSSAGS*FRKLAF
Trigger: GAAGGCGAGCTTCCTGAAGCAGGAACCCGCGGATGA...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CCA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGAAGCAACTCTGGATaGAGTGGAAACTGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRGSNSG*SGNCPG
Trigger: ACCAGGGCAGTTTCCACTCCATCCAGAGTTGCTTCC...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR TCA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGGCCCAAAGAGCTCTaGAAACTCATCCGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTRPKEL*KLIRGF
Trigger: GAACCCGCGGATGAGTTTTCAGAGCTCTTTGGGCCT...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR GCA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACAGTTACAAGACTGACTaGTTTTTGGCATTTACAGCC +
Preference number: 4 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHSYKTD*FLAFTA
Trigger: GGCTGTAAATGCCAAAAAGCAGTCAGTCTTGTAACT...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS-3UTR CCA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAGGTCAAAGGCTCCATTaGGGAAGAAGCCACAGTCCT +
Preference number: 4 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTGQRLH*GRSHSP
Trigger: AGGACTGTGGCTTCTTCCCCAATGGAGCCTTTGACC...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 90 bp GCAGTCCACCCAGCGGCACGCCTGCCGCCCGGCCACCACCCTGCCTaGCAGGCCCAGCCCCAGGCCTCCAAGGCTTGGGCCAGGCGGCAA +
Preference number: 5 (lower is better)
Translates to: AVHPAARLPPGHHPA*QAQPQASKAWARRQ
Trigger: TTGCCGCCTGGCCCAAGCCTTGGAGGCCTGGGGCTGGGCCTGGCAGGCAGGGTGGTGGCCGGGCGGCAGGCGTGCCGCTGGGTGGACTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 90 bp GGCGCAGGGGTGGCGAGGCTTCGGCCCGGGAGGTCCAGGTCTGGGTaGAGGCCAGTGGCCAGCGGGCCCCGACAGTGGGCAGACAGGGAT +
Preference number: 5 (lower is better)
Translates to: GAGVARLRPGRSRSG*RPVASGPRQWADRD
Trigger: ATCCCTGTCTGCCCACTGTCGGGGCCCGCTGGCCACTGGCCTGCACCCAGACCTGGACCTCCCGGGCCGAAGCCTCGCCACCCCTGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 90 bp GGAAGGCGCAGGGGTGGCGAGGCTTCGGCCCGGGAGGTCCAGGTCTaGGTGCAGGCCAGTGGCCAGCGGGCCCCGACAGTGGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: GRRRGGEASAREVQV*VQASGQRAPTVGRQ
Trigger: CTGTCTGCCCACTGTCGGGGCCCGCTGGCCACTGGCCTGCACCCAGACCTGGACCTCCCGGGCCGAAGCCTCGCCACCCCTGCGCCTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 90 bp GTGTCCGTAGCTCCCATTCACCTTCCCGGCGGCGGCGGCCTTGGATaGACCGTAGTCTCGGGGACTGCGGGGCCGGAGGAGGTCGTGGGC +
Preference number: 5 (lower is better)
Translates to: VSVAPIHLPGGGGLG*TVVSGTAGPEEVVG
Trigger: GCCCACGACCTCCTCCGGCCCCGCAGTCCCCGAGACTACGGTCCATCCAAGGCCGCCGCCGCCGGGAAGGTGAATGGGAGCTACGGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS-3UTR CAA 90 bp CTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGCCAGGCCTCCAAGGCTaGGGCCAGGCGGCAACTGAG +
Preference number: 5 (lower is better)
Translates to: LWPGTPARCTEGGSDSRWPGLQG*GQAATE
Trigger: CTCAGTTGCCGCCTGGCCCAAGCCTTGGAGGCCTGG...CCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp AAGCTCGGATGGCGGCTCCCTGGCAGCGCTGGGTGGGGTGGCAGCGCTGGCTCCCGCACCTGCTGCTCTTaGGCTGAATGGGCCTTGACG +
Preference number: 5 (lower is better)
Translates to: KLGWRLPGSAGWGGSAGSRTCCS*AEWALT
Trigger: CGTCAAGGCCCATTCAGCCAAAGAGCAGCAGGTGCG...GGAGCCAGCGCTGCCACCCCACCCAGCGCTGCCAGGGAGCCGCCATCCGAGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGACTGCCCTGGTAACCTaGTGGGCTGGGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRTALVT*WAGQRR
Trigger: CCGCCTCTGCCCAGCCCACAAGGTTACCAGGGCAGT...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 90 bp CCCTTGCCGTCGCTGGCAGCCAGCTGTGTGGACGTGTGGAGCTGCTaGAGGACCAGACACTCGGTCAGGACGTCGGCCTCGGTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: PLPSLAASCVDVWSC*RTRHSVRTSASVSG
Trigger: CCCTGACACCGAGGCCGACGTCCTGACCGAGTGTCTGGTCCTGCAGCAGCTCCACACGTCCACACAGCTGGCTGCCAGCGACGGCAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 90 bp GGGGACAGATGGTGGTGGGAACTGGTGGTGGCATCCAGCGGGTGGTaGCTGGAAGGTACGTCGTGCGCTGGGGGCAGGAGGCCCGATGCA +
Preference number: 5 (lower is better)
Translates to: GDRWWWELVVASSGW*LEGTSCAGGRRPDA
Trigger: TGCATCGGGCCTCCTGCCCCCAGCGCACGACGTACCTTCCAGGCACCACCCGCTGGATGCCACCACCAGTTCCCACCACCATCTGTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp CGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGGGCCTCTGCCATGGCTaGGTAGTCGGGCAAGGACTC +
Preference number: 5 (lower is better)
Translates to: RLWPGTPARCTEGGSDSRGLCHG*VVGQGL
Trigger: GAGTCCTTGCCCGACTACCAAGCCATGGCAGAGGCC...CCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGGCCTCCTTAGGCCTCTaGTCCGAGTGTGCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRASLGL*SECASA
Trigger: GGCTGAGGCACACTCGGACAAGAGGCCTAAGGAGGC...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS GCA 90 bp ACGGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTaGTGGATGGGCAGGCGCATGTGGGGGCTCCTTCAGGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: TEGGSDSRWARWHLQ*WMGRRMWGLLQVSV
Trigger: CACAGACACCTGAAGGAGCCCCCACATGCGCCTGCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 90 bp AGGAAGCTCGCCTTCCGGCAGGCTTCAAGTTGCAAGCTGCCCTCATaGCTGTCCGTCGATGCAGGGCCAGGCCGGGCCCGCTTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RKLAFRQASSCKLPS*LSVDAGPGRARLEG
Trigger: CCCTTCCAAGCGGGCCCGGCCTGGCCCTGCATCGACGGACAGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCGGAAGGCGAGCTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 90 bp AGAGGGGACAGATGGTGGTGGGAACTGGTGGTGGCATCCAGCGGGTaGTGCCTGGAAGGTACGTCGTGCGCTGGGGGCAGGAGGCCCGAT +
Preference number: 5 (lower is better)
Translates to: RGDRWWWELVVASSG*CLEGTSCAGGRRPD
Trigger: ATCGGGCCTCCTGCCCCCAGCGCACGACGTACCTTCCAGGCACCACCCGCTGGATGCCACCACCAGTTCCCACCACCATCTGTCCCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATCCAGGCCTCCAAGGCTaGGGCCAGGCGGCAACTGAG +
Preference number: 5 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDPGLQG*GQAATE
Trigger: CTCAGTTGCCGCCTGGCCCAAGCCTTGGAGGCCTGG...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATTGGGTGCGCTGGTGCTaGGCGCGGTCGCTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDWVRWC*ARSLEL
Trigger: CAACTCCAGCGACCGCGCCAAGCACCAGCGCACCCA...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 90 bp GCGGGTTCCTGCTTCAGGAAGCTCGCCTTCCGGCAGGCTTCAAGTTaGAAGCTGCCCTCATGGCTGTCCGTCGATGCAGGGCCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: AGSCFRKLAFRQASS*KLPSWLSVDAGPGR
Trigger: CCGGCCTGGCCCTGCATCGACGGACAGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCGGAAGGCGAGCTTCCTGAAGCAGGAACCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 90 bp AAGCCACAGTCCTCGGGGCCGCTGGACACCACATCTTCAGATGGCTaGTGTGGCAGCGCTGTGGGGCATGAGGCCTCAGCCAGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: KPQSSGPLDTTSSDG*CGSAVGHEASARAS
Trigger: TGAGGCCCTGGCTGAGGCCTCATGCCCCACAGCGCTGCCACAGCAGCCATCTGAAGATGTGGTGTCCAGCGGCCCCGAGGACTGTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 90 bp GGTACGTCGTGCGCTGGGGGCAGGAGGCCCGATGCAAGTCCGTTATaGGGGGTGATGGAGCCAGGATACACACCTGGGAGCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GTSCAGGRRPDASPL*GVMEPGYTPGSSSW
Trigger: CCAGGAGCTGCTCCCAGGTGTGTATCCTGGCTCCATCACCCCCCATAACGGACTTGCATCGGGCCTCCTGCCCCCAGCGCACGACGTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 90 bp ACAGATGGTGGTGGGAACTGGTGGTGGCATCCAGCGGGTGGTGCCTaGAAGGTACGTCGTGCGCTGGGGGCAGGAGGCCCGATGCAAGTC +
Preference number: 5 (lower is better)
Translates to: TDGGGNWWWHPAGGA*KVRRALGAGGPMQV
Trigger: GACTTGCATCGGGCCTCCTGCCCCCAGCGCACGACGTACCTTCCAGGCACCACCCGCTGGATGCCACCACCAGTTCCCACCACCATCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 90 bp GGCCGCTGGACACCACATCTTCAGATGGCTGCTGTGGCAGCGCTGTaGGGCATGAGGCCTCAGCCAGGGCCTCATAGCCTGTGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: GRWTPHLQMAAVAAL*GMRPQPGPHSLWQA
Trigger: TGCCTGCCACAGGCTATGAGGCCCTGGCTGAGGCCTCATGCCCCACAGCGCTGCCACAGCAGCCATCTGAAGATGTGGTGTCCAGCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCCTCTCACAAGCTaGGGGGTGAGCCCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCAQPLTS*GVSPGR
Trigger: CCGCCCCGGGCTCACCCCCAAGCTTGTGAGAGGCTG...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGCCGGCAGGCTTCAAGTaGCAAGCTGCCCTCATGGCT +
Preference number: 5 (lower is better)
Translates to: CGLALLLGARRVGATAGGPAGFK*QAALMA
Trigger: AGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCGG...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp GGAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCCGGCAGGCTTCAAGTaGCAAGCTGCCCTCATGGCT +
Preference number: 5 (lower is better)
Translates to: GGWERQQVGEVASAVLDGPAGFK*QAALMA
Trigger: AGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCGG...CCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp TGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACAGCAGGTGGGTTGGCTGAATGGGCCTaGACGTGCTTGCGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: CGLALLLGARRVGATAGGLAEWA*TCLRRE
Trigger: CTCCCTCCGCAAGCACGTCAAGGCCCATTCAGCCAA...CCCACCTGCTGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 90 bp GGCCAGCGGGCCCCGACAGTGGGCAGACAGGGATGTGCGGGCCTCTaGCATGGCTTGGTAGTCGGGCAAGGACTCCTGTTTGATGTGTTG +
Preference number: 5 (lower is better)
Translates to: GQRAPTVGRQGCAGL*HGLVVGQGLLFDVL
Trigger: CAACACATCAAACAGGAGTCCTTGCCCGACTACCAAGCCATGGCAGAGGCCCGCACATCCCTGTCTGCCCACTGTCGGGGCCCGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 90 bp GTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATaGGCAGGCGCATGTGGGGGCTCCTTCAGGTGTCTGTGTAGATGG +
Preference number: 5 (lower is better)
Translates to: VGATAGGRGGICSAG*AGACGGSFRCLCRW
Trigger: CCATCTACACAGACACCTGAAGGAGCCCCCACATGCGCCTGCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp GGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATGGCGGAGCCGTGAGAAGGCCTaGCTGCAGCCTTCAAACATG +
Preference number: 5 (lower is better)
Translates to: GHRSWRAPLCAQLKLGWRSREKA*LQPSNM
Trigger: CATGTTTGAAGGCTGCAGCAAGGCCTTCTCACGGCT...CCGCCATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp GAGGGTGGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTGCTGGATGGGCCTCCTCAGGTGGATCTaGAGGTTCTCCAGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: EGGSDSRWARWHLQCWMGLLRWI*RFSSRE
Trigger: CTCACGGCTGGAGAACCTCAAGATCCACCTGAGGAG...GCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCCACCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp TGTTCCGGCTGTGGCCTGGCACTCCTGCTAGGTGCACGGAGGGTGGGAGCGACATTGGCTGAATGGGCCTaGACGTGCTTGCGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: CSGCGLALLLGARRVGATLAEWA*TCLRRE
Trigger: CTCCCTCCGCAAGCACGTCAAGGCCCATTCAGCCAA...TGTCGCTCCCACCCTCCGTGCACCTAGCAGGAGTGCCAGGCCACAGCCGGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp ATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGACTGCCCTGGTAACCTaGTGGGCTGGGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: IEGMLQGHRSWRAPLCAQTALVT*WAGQRR
Trigger: CCGCCTCTGCCCAGCCCACAAGGTTACCAGGGCAGT...CTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp AAGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCTTGGGCCGCAGGGGGTaGAAACCGTGGGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: KIEGMLQGHRSWRAPLCALGRRG*KPWVSP
Trigger: CGGGGAGACCCACGGTTTCAACCCCCTGCGGCCCAA...GGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACACAGCCTCTCACAAGCTaGGGGGTGAGCCCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: TTAGRNGKTRSRECYRATQPLTS*GVSPGR
Trigger: CCGCCCCGGGCTCACCCCCAAGCTTGTGAGAGGCTG...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp TACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCTCAAGCTCGGATCTCCTCAGGTGGATCTaGAGGTTCTCCAGCCGTGAG +
Preference number: 5 (lower is better)
Translates to: YRATDPGGHLCAPSSSSDLLRWI*RFSSRE
Trigger: CTCACGGCTGGAGAACCTCAAGATCCACCTGAGGAG...ATCCGAGCTTGAGCTGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACATTGGGCCGCAGGGGGTaGAAACCGTGGGTCTCCCCG +
Preference number: 5 (lower is better)
Translates to: TTAGRNGKTRSRECYRATLGRRG*KPWVSP
Trigger: CGGGGAGACCCACGGTTTCAACCCCCTGCGGCCCAA...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 90 bp GTTCAGCCATCCGGTAGCAGTCGCCATAGGGGAAGCAACTCTGGATaGAGTGGAAACTGCCCTGGTAACCTTGTGGGCTGGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: VQPSGSSRHRGSNSG*SGNCPGNLVGWAEA
Trigger: CGCCTCTGCCCAGCCCACAAGGTTACCAGGGCAGTTTCCACTCCATCCAGAGTTGCTTCCCCTATGGCGACTGCTACCGGATGGCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp GATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCACTCCTGTTTGATGTGTaGTGTGGTTGGGAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: DRGNVTGPQILAGTSVRPLLFDV*CGWEAA
Trigger: GGCAGCCTCCCAACCACACAACACATCAAACAGGAG...TGGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp AACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACGGCCTCTGCCATGGCTaGGTAGTCGGGCAAGGACTC +
Preference number: 5 (lower is better)
Translates to: NHCGEEREDKIEGMLQGHGLCHG*VVGQGL
Trigger: GAGTCCTTGCCCGACTACCAAGCCATGGCAGAGGCC...GTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCCCTTCAAACATGCACTaGTTGGGCTTCTCGCCCGAG +
Preference number: 5 (lower is better)
Translates to: RSRECYRATDPGGHLCAPPSNMH*LGFSPE
Trigger: CTCGGGCGAGAAGCCCAACAAGTGCATGTTTGAAGG...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp AGATCGAGGGAATGTTACAGGGCCACAGATCCTGGCGGGCACCTCTGTGCGCCCAGCCGTGAGAAGGCCTaGCTGCAGCCTTCAAACATG +
Preference number: 5 (lower is better)
Translates to: RSRECYRATDPGGHLCAPSREKA*LQPSNM
Trigger: CATGTTTGAAGGCTGCAGCAAGGCCTTCTCACGGCT...GGGCGCACAGAGGTGCCCGCCAGGATCTGTGGCCCTGTAACATTCCCTCGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS TCA 90 bp TGCGGGCCTCTGCCATGGCTTGGTAGTCGGGCAAGGACTCCTGTTTaGTGTGTTGTGTGGTTGGGAGGCTGCCGTTCACATACGTGGCCT +
Preference number: 5 (lower is better)
Translates to: CGPLPWLGSRARTPV*CVVWLGGCRSHTWP
Trigger: AGGCCACGTATGTGAACGGCAGCCTCCCAACCACACAACACATCAAACAGGAGTCCTTGCCCGACTACCAAGCCATGGCAGAGGCCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGATGGGTGCGCTGGTGCTaGGCGCGGTCGCTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRWVRWC*ARSLEL
Trigger: CAACTCCAGCGACCGCGCCAAGCACCAGCGCACCCA...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp ACCACTGCGGGGAGGAACGGGAAGACAAGATCGAGGGAATGTTACAGGGCCACACGCACCTGCTGCTCTTaGGCTGAATGGGCCTTGACG +
Preference number: 5 (lower is better)
Translates to: TTAGRNGKTRSRECYRATRTCCS*AEWALT
Trigger: CGTCAAGGCCCATTCAGCCAAAGAGCAGCAGGTGCG...TGTGGCCCTGTAACATTCCCTCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp ACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAGATCGACTCCTGTTTGATGTGTaGTGTGGTTGGGAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: TRSVISKPLRGGTGRQDRLLFDV*CGWEAA
Trigger: GGCAGCCTCCCAACCACACAACACATCAAACAGGAG...TCGATCTTGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS-3UTR CAA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACACCTTCAAACATGCACTaGTTGGGCTTCTCGCCCGAG +
Preference number: 5 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTPSNMH*LGFSPE
Trigger: CTCGGGCGAGAAGCCCAACAAGTGCATGTTTGAAGG...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS TCA 90 bp TATTCAGATGAAGAAATTCAACCAGGTGGTACCACCAAAACATCATaGCTTACTGTCCACCGCCCCCACTCCGAGTCCATGCGCACAATC +
Preference number: 5 (lower is better)
Translates to: YSDEEIQPGGTTKTS*LTVHRPHSESMRTI
Trigger: GATTGTGCGCATGGACTCGGAGTGGGGGCGGTGGACAGTAAGTCATGATGTTTTGGTGGTACCACCTGGTTGAATTTCTTCATCTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS TCA 90 bp CCTTCCAAGGCCTCCCCAGAACATCACAGGAGCTTCTTATTCAGATaGAGAAATTCAACCAGGTGGTACCACCAAAACATCATGACTTAC +
Preference number: 5 (lower is better)
Translates to: PSKASPEHHRSFLFR*RNSTRWYHQNIMTY
Trigger: GTAAGTCATGATGTTTTGGTGGTACCACCTGGTTGAATTTCTTCATCTGAATAAGAAGCTCCTGTGATGTTCTGGGGAGGCCTTGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS-3UTR CAA 90 bp TATATACACGAGGTCTGTGATTTCAAAACCACTGCGGGGAGGAACGGGAAGACAAAGACTGACTGCTTTTaGGCATTTACAGCCATGATG +
Preference number: 5 (lower is better)
Translates to: YIHEVCDFKTTAGRNGKTKTDCF*AFTAMM
Trigger: CATCATGGCTGTAAATGCCAAAAAGCAGTCAGTCTT...TGTCTTCCCGTTCCTCCCCGCAGTGGTTTTGAAATCACAGACCTCGTGTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS GCA 72 bp CGGCGGCGGCCTTGGATGGACCGTAGTCTCGGGGACTaGGGGGCCGGAGGAGGTCGTGGGCGCGCGGTGGCG +
Preference number: 6 (lower is better)
Translates to: RRRPWMDRSLGD*GAGGGRGRAVA
Trigger: CGCCACCGCGCGCCCACGACCTCCTCCGGCCCCGCAGTCCCCGAGACTACGGTCCATCCAAGGCCGCCGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS GCA 72 bp GTGGCGAGGCTTCGGCCCGGGAGGTCCAGGTCTGGGTaGAGGCCAGTGGCCAGCGGGCCCCGACAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: VARLRPGRSRSG*RPVASGPRQWA
Trigger: TGCCCACTGTCGGGGCCCGCTGGCCACTGGCCTGCACCCAGACCTGGACCTCCCGGGCCGAAGCCTCGCCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp AGGGGTGGCGAGGCTTCGGCCCGGGAGGTCCAGGTCTaGGTGCAGGCCAGTGGCCAGCGGGCCCCGACAGTG +
Preference number: 6 (lower is better)
Translates to: RGGEASAREVQV*VQASGQRAPTV
Trigger: CACTGTCGGGGCCCGCTGGCCACTGGCCTGCACCCAGACCTGGACCTCCCGGGCCGAAGCCTCGCCACCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CAA 90 bp GGGCCGCGGTCGGGGCCGGGCGCACCAGGGGCCTCCTTAGGCCTCTaGTCCGAGTGTGCCTCAGCCACCTCGCAATGCATGGCGCCGGGG +
Preference number: 6 (lower is better)
Translates to: GPRSGPGAPGASLGL*SECASATSQCMAPG
Trigger: CCCCGGCGCCATGCATTGCGAGGTGGCTGAGGCACACTCGGACAAGAGGCCTAAGGAGGCCCCTGGTGCGCCCGGCCCCGACCGCGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS CCA 72 bp GCTCCCATTCACCTTCCCGGCGGCGGCGGCCTTGGATaGACCGTAGTCTCGGGGACTGCGGGGCCGGAGGAG +
Preference number: 6 (lower is better)
Translates to: APIHLPGGGGLG*TVVSGTAGPEE
Trigger: CTCCTCCGGCCCCGCAGTCCCCGAGACTACGGTCCATCCAAGGCCGCCGCCGCCGGGAAGGTGAATGGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS CCA 72 bp TCTGGGTGCAGGCCAGTGGCCAGCGGGCCCCGACAGTaGGCAGACAGGGATGTGCGGGCCTCTGCCATGGCT +
Preference number: 6 (lower is better)
Translates to: SGCRPVASGPRQ*ADRDVRASAMA
Trigger: AGCCATGGCAGAGGCCCGCACATCCCTGTCTGCCCACTGTCGGGGCCCGCTGGCCACTGGCCTGCACCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp GGTGGGAACTGGTGGTGGCATCCAGCGGGTGGTGCCTaGAAGGTACGTCGTGCGCTGGGGGCAGGAGGCCCG +
Preference number: 6 (lower is better)
Translates to: GGNWWWHPAGGA*KVRRALGAGGP
Trigger: CGGGCCTCCTGCCCCCAGCGCACGACGTACCTTCCAGGCACCACCCGCTGGATGCCACCACCAGTTCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp CGTAGCTCCCATTCACCTTCCCGGCGGCGGCGGCCTTaGATGGACCGTAGTCTCGGGGACTGCGGGGCCGGA +
Preference number: 6 (lower is better)
Translates to: RSSHSPSRRRRP*MDRSLGDCGAG
Trigger: TCCGGCCCCGCAGTCCCCGAGACTACGGTCCATCCAAGGCCGCCGCCGCCGGGAAGGTGAATGGGAGCTACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS CCA 72 bp GTTCGCTGCCCAGAAGGTAGCAGGAAGGCGCAGGGGTaGCGAGGCTTCGGCCCGGGAGGTCCAGGTCTGGGT +
Preference number: 6 (lower is better)
Translates to: VRCPEGSRKAQG*RGFGPGGPGLG
Trigger: ACCCAGACCTGGACCTCCCGGGCCGAAGCCTCGCCACCCCTGCGCCTTCCTGCTACCTTCTGGGCAGCGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp GCCTTCCGGCAGGCTTCAAGTTGCAAGCTGCCCTCATaGCTGTCCGTCGATGCAGGGCCAGGCCGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: AFRQASSCKLPS*LSVDAGPGRAR
Trigger: GCGGGCCCGGCCTGGCCCTGCATCGACGGACAGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCGGAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp TTCAAGTTGCAAGCTGCCCTCATGGCTGTCCGTCGATaGAGGGCCAGGCCGGGCCCGCTTGGAAGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: FKLQAALMAVRR*RARPGPLGRAP
Trigger: GGGGGCCCTTCCAAGCGGGCCCGGCCTGGCCCTGCATCGACGGACAGCCATGAGGGCAGCTTGCAACTTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp CCGTCGCTGGCAGCCAGCTGTGTGGACGTGTGGAGCTaGTGCAGGACCAGACACTCGGTCAGGACGTCGGCC +
Preference number: 6 (lower is better)
Translates to: PSLAASCVDVWS*CRTRHSVRTSA
Trigger: GGCCGACGTCCTGACCGAGTGTCTGGTCCTGCAGCAGCTCCACACGTCCACACAGCTGGCTGCCAGCGACGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp ACCGTGGGTCTCCCCGACCAGTCCGTCCCCACCGGCTaGTGGTTCAGCCATCCGGTAGCAGTCGCCATAGGG +
Preference number: 6 (lower is better)
Translates to: TVGLPDQSVPTG*WFSHPVAVAIG
Trigger: CCCTATGGCGACTGCTACCGGATGGCTGAACCAGCAGCCGGTGGGGACGGACTGGTCGGGGAGACCCACGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp GGGAGCGACAGCAGGTGGGCGAGGTGGCATCTGCAGTaGTGGATGGGCAGGCGCATGTGGGGGCTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: GSDSRWARWHLQ*WMGRRMWGLLQ
Trigger: CTGAAGGAGCCCCCACATGCGCCTGCCCATCCAGCACTGCAGATGCCACCTCGCCCACCTGCTGTCGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CAA 72 bp TCGGGGCCGGGCGCACCAGGGGCCTCCTTAGGCCTCTaGTCCGAGTGTGCCTCAGCCACCTCGCAATGCATG +
Preference number: 6 (lower is better)
Translates to: SGPGAPGASLGL*SECASATSQCM
Trigger: CATGCATTGCGAGGTGGCTGAGGCACACTCGGACAAGAGGCCTAAGGAGGCCCCTGGTGCGCCCGGCCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628545.1
CDS GCA 72 bp TCGCTGGCAGCCAGCTGTGTGGACGTGTGGAGCTGCTaGAGGACCAGACACTCGGTCAGGACGTCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SLAASCVDVWSC*RTRHSVRTSAS
Trigger: CGAGGCCGACGTCCTGACCGAGTGTCTGGTCCTGCAGCAGCTCCACACGTCCACACAGCTGGCTGCCAGCGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp GTGGCATCCAGCGGGTGGTGCCTGGAAGGTACGTCGTaGGCTGGGGGCAGGAGGCCCGATGCAAGTCCGTTA +
Preference number: 6 (lower is better)
Translates to: VASSGWCLEGTS*AGGRRPDASPL
Trigger: TAACGGACTTGCATCGGGCCTCCTGCCCCCAGCGCACGACGTACCTTCCAGGCACCACCCGCTGGATGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp TCCTCGGGGCCGCTGGACACCACATCTTCAGATGGCTaGTGTGGCAGCGCTGTGGGGCATGAGGCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SSGPLDTTSSDG*CGSAVGHEASA
Trigger: GGCTGAGGCCTCATGCCCCACAGCGCTGCCACAGCAGCCATCTGAAGATGTGGTGTCCAGCGGCCCCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp ATCCAGCGGGTGGTGCCTGGAAGGTACGTCGTGCGCTaGGGGCAGGAGGCCCGATGCAAGTCCGTTATGGGG +
Preference number: 6 (lower is better)
Translates to: IQRVVPGRYVVR*GQEARCKSVMG
Trigger: CCCCATAACGGACTTGCATCGGGCCTCCTGCCCCCAGCGCACGACGTACCTTCCAGGCACCACCCGCTGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp AGATGGTGGTGGGAACTGGTGGTGGCATCCAGCGGGTaGTGCCTGGAAGGTACGTCGTGCGCTGGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: RWWWELVVASSG*CLEGTSCAGGR
Trigger: CCTGCCCCCAGCGCACGACGTACCTTCCAGGCACCACCCGCTGGATGCCACCACCAGTTCCCACCACCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CAA 90 bp CGCGGGTTCCTGCTTCAGGAAGCTCGCCTTCCGGCAGGCTTCAAGTaGCAAGCTGCCCTCATGGCTGTCCGTCGATGCAGGGCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: RGFLLQEARLPAGFK*QAALMAVRRCRARP
Trigger: CGGCCTGGCCCTGCATCGACGGACAGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCGGAAGGCGAGCTTCCTGAAGCAGGAACCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp TGCGCTGGGGGCAGGAGGCCCGATGCAAGTCCGTTATaGGGGGTGATGGAGCCAGGATACACACCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: CAGGRRPDASPL*GVMEPGYTPGS
Trigger: GCTCCCAGGTGTGTATCCTGGCTCCATCACCCCCCATAACGGACTTGCATCGGGCCTCCTGCCCCCAGCGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp GCCCCGACAGTGGGCAGACAGGGATGTGCGGGCCTCTaGCATGGCTTGGTAGTCGGGCAAGGACTCCTGTTT +
Preference number: 6 (lower is better)
Translates to: APTVGRQGCAGL*HGLVVGQGLLF
Trigger: AAACAGGAGTCCTTGCCCGACTACCAAGCCATGGCAGAGGCCCGCACATCCCTGTCTGCCCACTGTCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp ACACCACATCTTCAGATGGCTGCTGTGGCAGCGCTGTaGGGCATGAGGCCTCAGCCAGGGCCTCATAGCCTG +
Preference number: 6 (lower is better)
Translates to: TPHLQMAAVAAL*GMRPQPGPHSL
Trigger: CAGGCTATGAGGCCCTGGCTGAGGCCTCATGCCCCACAGCGCTGCCACAGCAGCCATCTGAAGATGTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp CTCCATTGGGGAAGAAGCCACAGTCCTCGGGGCCGCTaGACACCACATCTTCAGATGGCTGCTGTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: LHWGRSHSPRGR*TPHLQMAAVAA
Trigger: CGCTGCCACAGCAGCCATCTGAAGATGTGGTGTCCAGCGGCCCCGAGGACTGTGGCTTCTTCCCCAATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CAA 90 bp GCCCCGACAGTGGGCAGACAGGGATGTGCGGGCCTCTGCCATGGCTaGGTAGTCGGGCAAGGACTCCTGTTTGATGTGTTGTGTGGTTGG +
Preference number: 6 (lower is better)
Translates to: APTVGRQGCAGLCHG*VVGQGLLFDVLCGW
Trigger: CCAACCACACAACACATCAAACAGGAGTCCTTGCCCGACTACCAAGCCATGGCAGAGGCCCGCACATCCCTGTCTGCCCACTGTCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp TGCTTCAGGAAGCTCGCCTTCCGGCAGGCTTCAAGTTaGAAGCTGCCCTCATGGCTGTCCGTCGATGCAGGG +
Preference number: 6 (lower is better)
Translates to: CFRKLAFRQASS*KLPSWLSVDAG
Trigger: CCCTGCATCGACGGACAGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCGGAAGGCGAGCTTCCTGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp GTGTCAGGGCCCGCATGCAGCTTCTTACGCACCTGCTaGTCTTTGGCTGAATGGGCCTTGACGTGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: VSGPACSFLRTC*SLAEWALTCLR
Trigger: CCGCAAGCACGTCAAGGCCCATTCAGCCAAAGAGCAGCAGGTGCGTAAGAAGCTGCATGCGGGCCCTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp TGTGTGGTTGGGAGGCTGCCGTTCACATACGTGGCCTaGGGTCTAGGTGACCTGTCAGGGTGGGGGAAATGC +
Preference number: 6 (lower is better)
Translates to: CVVGRLPFTYVA*GLGDLSGWGKC
Trigger: GCATTTCCCCCACCCTGACAGGTCACCTAGACCCCAGGCCACGTATGTGAACGGCAGCCTCCCAACCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CAA 72 bp CTGCTTCAGGAAGCTCGCCTTCCGGCAGGCTTCAAGTaGCAAGCTGCCCTCATGGCTGTCCGTCGATGCAGG +
Preference number: 6 (lower is better)
Translates to: LLQEARLPAGFK*QAALMAVRRCR
Trigger: CCTGCATCGACGGACAGCCATGAGGGCAGCTTGCAACTTGAAGCCTGCCGGAAGGCGAGCTTCCTGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp CTCCGGAGTCCATTTACACAGGTGACCAGAGACGTCTaGGAGGAGCGGATGATGGAGGTGACGTCGGAGGAG +
Preference number: 6 (lower is better)
Translates to: LRSPFTQVTRDV*EERMMEVTSEE
Trigger: CTCCTCCGACGTCACCTCCATCATCCGCTCCTCCCAGACGTCTCTGGTCACCTGTGTAAATGGACTCCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CAA 72 bp GTGGGCAGACAGGGATGTGCGGGCCTCTGCCATGGCTaGGTAGTCGGGCAAGGACTCCTGTTTGATGTGTTG +
Preference number: 6 (lower is better)
Translates to: VGRQGCAGLCHG*VVGQGLLFDVL
Trigger: CAACACATCAAACAGGAGTCCTTGCCCGACTACCAAGCCATGGCAGAGGCCCGCACATCCCTGTCTGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CAA 90 bp CTCTGCCATGGCTTGGTAGTCGGGCAAGGACTCCTGTTTGATGTGTaGTGTGGTTGGGAGGCTGCCGTTCACATACGTGGCCTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: LCHGLVVGQGLLFDV*CGWEAAVHIRGLGS
Trigger: AGACCCCAGGCCACGTATGTGAACGGCAGCCTCCCAACCACACAACACATCAAACAGGAGTCCTTGCCCGACTACCAAGCCATGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS GCA 72 bp GGCCCAAAGAGCTCTGAAAACTCATCCGCGGGTTCCTaGTTCAGGAAGCTCGCCTTCCGGCAGGCTTCAAGT +
Preference number: 6 (lower is better)
Translates to: GPKSSENSSAGS*FRKLAFRQASS
Trigger: ACTTGAAGCCTGCCGGAAGGCGAGCTTCCTGAAGCAGGAACCCGCGGATGAGTTTTCAGAGCTCTTTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp GTCGGGCAAGGACTCCTGTTTGATGTGTTGTGTGGTTaGGAGGCTGCCGTTCACATACGTGGCCTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: VGQGLLFDVLCG*EAAVHIRGLGS
Trigger: AGACCCCAGGCCACGTATGTGAACGGCAGCCTCCCAACCACACAACACATCAAACAGGAGTCCTTGCCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CCA 72 bp TCCGGTAGCAGTCGCCATAGGGGAAGCAACTCTGGATaGAGTGGAAACTGCCCTGGTAACCTTGTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SGSSRHRGSNSG*SGNCPGNLVGW
Trigger: CCAGCCCACAAGGTTACCAGGGCAGTTTCCACTCCATCCAGAGTTGCTTCCCCTATGGCGACTGCTACCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS CAA 72 bp GGCTTGGTAGTCGGGCAAGGACTCCTGTTTGATGTGTaGTGTGGTTGGGAGGCTGCCGTTCACATACGTGGC +
Preference number: 6 (lower is better)
Translates to: GLVVGQGLLFDV*CGWEAAVHIRG
Trigger: GCCACGTATGTGAACGGCAGCCTCCCAACCACACAACACATCAAACAGGAGTCCTTGCCCGACTACCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS TCA 72 bp CTGCCATGGCTTGGTAGTCGGGCAAGGACTCCTGTTTaGTGTGTTGTGTGGTTGGGAGGCTGCCGTTCACAT +
Preference number: 6 (lower is better)
Translates to: LPWLGSRARTPV*CVVWLGGCRSH
Trigger: ATGTGAACGGCAGCCTCCCAACCACACAACACATCAAACAGGAGTCCTTGCCCGACTACCAAGCCATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312233.4
ENST00000628545.1
CDS TCA 72 bp GAAGAAATTCAACCAGGTGGTACCACCAAAACATCATaGCTTACTGTCCACCGCCCCCACTCCGAGTCCATG +
Preference number: 6 (lower is better)
Translates to: EEIQPGGTTKTS*LTVHRPHSESM
Trigger: CATGGACTCGGAGTGGGGGCGGTGGACAGTAAGTCATGATGTTTTGGTGGTACCACCTGGTTGAATTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312233.4
CDS TCA 72 bp GCCTCCCCAGAACATCACAGGAGCTTCTTATTCAGATaGAGAAATTCAACCAGGTGGTACCACCAAAACATC +
Preference number: 6 (lower is better)
Translates to: ASPEHHRSFLFR*RNSTRWYHQNI
Trigger: GATGTTTTGGTGGTACCACCTGGTTGAATTTCTTCATCTGAATAAGAAGCTCCTGTGATGTTCTGGGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312233.4