RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLIPR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000139278

Ensembl transcript IDs: ENST00000266659.8, ENST00000456650.7, ENST00000536703.5, ENST00000550491.1

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCAGTGCAAACTGGATTGACAGTCCTCTCCTGACCTCTGGTCTGTaGTTGGAAAAGACTCTTTGTTGTGAAAGATACAAACCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: FSANWIDSPLLTSGL*LEKTLCCERYKPRA
Trigger: TGCCCTGGGTTTGTATCTTTCACAACAAAGAGTCTTTTCCAAGCACAGACCAGAGGTCAGGAGAGGACTGTCAATCCAGTTTGCACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CCA 90 bp TCTTCACCTGTCTCCTGGGGGTTCTTGCTTCATTATTCCCTTCCTTaGCTATATCCTAAAGCCTTCCCTTTCTACTTCTGCTCAGCATGT +
Preference number: 1 (lower is better)
Translates to: SSPVSWGFLLHYSLP*LYPKAFPFYFCSAC
Trigger: ACATGCTGAGCAGAAGTAGAAAGGGAAGGCTTTAGGATATAGCCAAGGAAGGGAATAATGAAGCAAGAACCCCCAGGAGACAGGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CCA 90 bp GTGCTACTGTACCTTGCTCATTTTGCAGATTTAGAAGCTGAAACATaGGTTAGGTTACTTACTAAAAGTCCACCTGTGGCAACCTGCAAA +
Preference number: 1 (lower is better)
Translates to: VLLYLAHFADLEAET*VRLLTKSPPVATCK
Trigger: TTTGCAGGTTGCCACAGGTGGACTTTTAGTAAGTAACCTAACCCATGTTTCAGCTTCTAAATCTGCAAAATGAGCAAGGTACAGTAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
3UTR CCA 90 bp ATAATTTATAATTTAGAGGCAGCTAATGCCTATTTCAGTGCAAACTaGATTGACAGTCCTCTCCTGACCTCTGGTCTGTGCTTGGAAAAG +
Preference number: 1 (lower is better)
Translates to: IIYNLEAANAYFSAN*IDSPLLTSGLCLEK
Trigger: CTTTTCCAAGCACAGACCAGAGGTCAGGAGAGGACTGTCAATCCAGTTTGCACTGAAATAGGCATTAGCTGCCTCTAAATTATAAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CCA 90 bp GAGAAAGAGAGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTaGATATACAACAGAGTAGTAACCTGTGAAACAAACATAGAATAT +
Preference number: 1 (lower is better)
Translates to: EKERSVSVTWIYGPA*IYNRVVTCETNIEY
Trigger: ATATTCTATGTTTGTTTCACAGGTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCTCTCTTTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
3UTR TCA 90 bp TGGGAGACAGGTCAGTTATACACATTTTACATGTTGGCTGTATATTaGATGAACAAGCTGTTGCTTTTGCTAATTAGTCACCAATTCCTG +
Preference number: 1 (lower is better)
Translates to: WETGQLYTFYMLAVY*MNKLLLLLISHQFL
Trigger: CAGGAATTGGTGACTAATTAGCAAAAGCAACAGCTTGTTCATTCAATATACAGCCAACATGTAAAATGTGTATAACTGACCTGTCTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CAA 90 bp AGTGCAAACTGGATTGACAGTCCTCTCCTGACCTCTGGTCTGTGCTaGGAAAAGACTCTTTGTTGTGAAAGATACAAACCCAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SANWIDSPLLTSGLC*EKTLCCERYKPRAA
Trigger: GGCTGCCCTGGGTTTGTATCTTTCACAACAAAGAGTCTTTTCCAAGCACAGACCAGAGGTCAGGAGAGGACTGTCAATCCAGTTTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCATCCCTGAACTACTCTaGGTTGTATTCCATGGAGGT +
Preference number: 2 (lower is better)
Translates to: PPASASSMCSLNSIFTCLIPELL*VVFHGG
Trigger: ACCTCCATGGAATACAACCCAGAGTAGTTCAGGGAT...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR GCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCTGCTTCCATAACACCTaGCTTATTTCTTATGGCCCT +
Preference number: 2 (lower is better)
Translates to: PPASASSMCSLNSIFTCLCFHNT*LISYGP
Trigger: AGGGCCATAAGAAATAAGGCAGGTGTTATGGAAGCA...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCCATTATTCCCTTCCTTaGCTATATCCTAAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: PPASASSMCSLNSIFTCLHYSLP*LYPKAF
Trigger: GAAGGCTTTAGGATATAGCCAAGGAAGGGAATAATG...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CCA 90 bp ATGAGAAAGAGAGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATTACGTACGTTTGACTTaGTCTCGCTGTCGGTTAACA +
Preference number: 2 (lower is better)
Translates to: MRKREVYLLRGYMGQPGYYVRLT*SRCRLT
Trigger: TGTTAACCGACAGCGAGACCAAGTCAAACGTACGTA...ATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCTCTCTTTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
3UTR-3UTR TCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAATGTGATCCTGTACTTTaGATGGTAAGAAAAAGTTGC +
Preference number: 2 (lower is better)
Translates to: ARRSLSSAVMPLKEELSECDPVL*MVRKSC
Trigger: GCAACTTTTTCTTACCATTCAAAGTACAGGATCACA...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR TCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTATGCAAGAAGATCCCTaGGCTCTGCTGTCATGCCTC +
Preference number: 2 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCMQEDP*ALLSCL
Trigger: GAGGCATGACAGCAGAGCTCAGGGATCTTCTTGCAT...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR TCA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGAGTTACTCCTCTGTTCTaGATCTGGGGAAGTAGTAAA +
Preference number: 2 (lower is better)
Translates to: TWISHHLRLKDADRSYSGVTPLF*IWGSSK
Trigger: TTTACTACTTCCCCAGATTCAGAACAGAGGAGTAAC...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR TCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATAAAGACTCTTTGTTGTaGAAGATACAAACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYKDSLL*KIQTQG
Trigger: GCCCTGGGTTTGTATCTTTCACAACAAAGAGTCTTT...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR GCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTACCCAGGGCAGCCAGTaGATCTTCTGTAGAAATGCA +
Preference number: 2 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCTQGSQ*IFCRNA
Trigger: TGCATTTCTACAGAAGATGCACTGGCTGCCCTGGGT...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCCTGCCTTATTTCTTATaGCCCTTTCTTGTAGTAATT +
Preference number: 2 (lower is better)
Translates to: PPASASSMCSLNSIFTCLLPYFL*PFLVVI
Trigger: AATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCGGAAGTTTTGGATCATaGAGGAAATTGATAGTAGTT +
Preference number: 2 (lower is better)
Translates to: PPASASSMCSLNSIFTCLGSFGS*RKLIVV
Trigger: AACTACTATCAATTTCCTCCATGATCCAAAACTTCC...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR TCA 90 bp TGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAACAAAGCCATATGTGAATaGGGTTGGTTTTTGGGTTTT +
Preference number: 2 (lower is better)
Translates to: CICYVDIWASLDIQQSSNKAICE*GWFLGF
Trigger: AAAACCCAAAAACCAACCTCATTCACATATGGCTTT...GTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536703.5
3UTR-3UTR GCA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCAAGGATATTGTGACTTaGTTAGGACATGACTTCTCC +
Preference number: 2 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSKDIVT*LGHDFS
Trigger: GGAGAAGTCATGTCCTAAGCAAGTCACAATATCCTT...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR TCA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCTCACACTTTTGGCATTaGTTAGATAGTTGGCTTCTA +
Preference number: 2 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSSHFWH*LDSWLL
Trigger: TAGAAGCCAACTATCTAATCAATGCCAAAAGTGTGA...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR TCA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCCTATTAGTGCGAAAGTaGTTGTGGTTTTTAAATGGC +
Preference number: 2 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSLLVRK*LWFLNG
Trigger: GCCATTTAAAAACCACAATCACTTTCGCACTAATAG...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR TCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTCTTCTCACACTTTTCTaGATCAGTGACCTTCCATGC +
Preference number: 2 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCLLTLF*ISDLPC
Trigger: GCATGGAAGGTCACTGATTCAGAAAAGTGTGAGAAG...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR GCA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATAATCACCTAAAAATGTaGTACTGTACCTTGCTCATT +
Preference number: 2 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNNHLKM*YCTLLI
Trigger: AATGAGCAAGGTACAGTAGCACATTTTTAGGTGATT...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR GCA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGAAACCTGTCAGTTGAGTaGTTTGAAGGTACTCAATAT +
Preference number: 2 (lower is better)
Translates to: TWISHHLRLKDADRSYSGNLSVE*FEGTQY
Trigger: ATATTGAGTACCTTCAAAGCACTCAACTGACAGGTT...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGATATATGGGCCAGCCTaGATATACAACAGAGTAGTA +
Preference number: 2 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQIYGPA*IYNRVV
Trigger: TACTACTCTGTTGTATATCCAGGCTGGCCCATATAT...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536703.5
3UTR CAA 90 bp AAAGTGAACAGTGACACACTGAAGGGAGAGGGCTCACCAGCAATATaGTACATAGACTGGGTCAGAAACAGATATAATACATTATTATTT +
Preference number: 2 (lower is better)
Translates to: KVNSDTLKGEGSPAI*YIDWVRNRYNTLLF
Trigger: AAATAATAATGTATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCCCTTCAGTGTGTCACTGTTCACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTCTAAAAGTCCACCTGTaGCAACCTGCAAATAATGCT +
Preference number: 2 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCLKVHL*QPANNA
Trigger: AGCATTATTTGCAGGTTGCCACAGGTGGACTTTTAG...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATATTGTGGTTTTTAAATaGCAGAAATCACTTTCGCAC +
Preference number: 2 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYIVVFK*QKSLSH
Trigger: GTGCGAAAGTGATTTCTGCCATTTAAAAACCACAAT...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR GCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGAATCACCTAAAAATGTaGTACTGTACCTTGCTCATT +
Preference number: 2 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQNHLKM*YCTLLI
Trigger: AATGAGCAAGGTACAGTAGCACATTTTTAGGTGATT...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
3UTR-3UTR TCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTAAAGCCATATGTGAATaGGGTTGGTTTTTGGGTTTT +
Preference number: 2 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCKAICE*GWFLGF
Trigger: AAAACCCAAAAACCAACCTCATTCACATATGGCTTT...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR TCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTAGGAAAAACCAATTGTaGAACCTAAGGAAGGTAATG +
Preference number: 2 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCRKNQL*NLRKVM
Trigger: CATTACCTTCCTTAGGTTTCACAATTGGTTTTTCCT...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CCA 72 bp ATCAGTGACCTTCCATGCCATATCCCTGAACTACTCTaGGTTGTATTCCATGGAGGTGCTTTCCTACCTCCA +
Preference number: 3 (lower is better)
Translates to: ISDLPCHIPELL*VVFHGGAFLPP
Trigger: TGGAGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCATGGAAGGTCACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR TCA 72 bp TTCTTCCACCTGCATCAGCCTCTTCTATGTGTTCTTTaGATTCCATCTTCACCTGTCTCCTGGGGGTTCTTG +
Preference number: 3 (lower is better)
Translates to: FFHLHQPLLCVL*IPSSPVSWGFL
Trigger: CAAGAACCCCCAGGAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CAA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCACCTCTGGTCTGTGCTaGGAAAAGACTCTTTGTTGT +
Preference number: 3 (lower is better)
Translates to: PPASASSMCSLNSIFTCLTSGLC*EKTLCC
Trigger: ACAACAAAGAGTCTTTTCCAAGCACAGACCAGAGGT...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CAA 90 bp AGTGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAAGATTGTCCAAACACTaGTCATTATTGGGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: SVSVTWIYGPAWIYNRVVRLSKH*SLLGQA
Trigger: TGCCTGCCCCAATAATGACAAGTGTTTGGACAATCT...TACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
3UTR GCA 72 bp AACTGGATTGACAGTCCTCTCCTGACCTCTGGTCTGTaGTTGGAAAAGACTCTTTGTTGTGAAAGATACAAA +
Preference number: 3 (lower is better)
Translates to: NWIDSPLLTSGL*LEKTLCCERYK
Trigger: TTTGTATCTTTCACAACAAAGAGTCTTTTCCAAGCACAGACCAGAGGTCAGGAGAGGACTGTCAATCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR GCA 72 bp TTTGAATTCCATCTTCACCTGTCTCCTGGGGGTTCTTaGTTCATTATTCCCTTCCTTGGCTATATCCTAAAG +
Preference number: 3 (lower is better)
Translates to: FEFHLHLSPGGS*FIIPFLGYILK
Trigger: CTTTAGGATATAGCCAAGGAAGGGAATAATGAAGCAAGAACCCCCAGGAGACAGGTGAAGATGGAATTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CCA 72 bp AGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTaGATATACAACAGAGTAGTAACCTGTGAAACAAAC +
Preference number: 3 (lower is better)
Translates to: RSVSVTWIYGPA*IYNRVVTCETN
Trigger: GTTTGTTTCACAGGTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
3UTR-3UTR CAA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATCAGTGTCTGATGCTATaGGTTAGTAATGATGTCCCA +
Preference number: 3 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYQCLML*VSNDVP
Trigger: TGGGACATCATTACTAACCAATAGCATCAGACACTG...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CAA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCTTTTGGTGGTGGTGGTaGTTCATAGAAGAGTGTTCT +
Preference number: 3 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSFWWWW*FIEECS
Trigger: AGAACACTCTTCTATGAACAACCACCACCACCAAAA...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CAA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGACATACCCAAAACTCCTaGACTAGAACTATCTCCTTT +
Preference number: 3 (lower is better)
Translates to: TWISHHLRLKDADRSYSGHTQNS*TRTISF
Trigger: AAAGGAGATAGTTCTAGTCAAGGAGTTTTGGGTATG...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR TCA 72 bp CTGACAGGTCTTATTCAGGAGCTATTAGTGCGAAAGTaGTTGTGGTTTTTAAATGGCAGAAATCACTTTCGC +
Preference number: 3 (lower is better)
Translates to: LTGLIQELLVRK*LWFLNGRNHFR
Trigger: GCGAAAGTGATTTCTGCCATTTAAAAACCACAATCACTTTCGCACTAATAGCTCCTGAATAAGACCTGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR GCA 72 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATaGCACTACCTTTATTCCAGGCTCTCATCTATTCTT +
Preference number: 3 (lower is better)
Translates to: SPIPDSSGFYSA*HYLYSRLSSIL
Trigger: AAGAATAGATGAGAGCCTGGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CCA 72 bp TACCTTGCTCATTTTGCAGATTTAGAAGCTGAAACATaGGTTAGGTTACTTACTAAAAGTCCACCTGTGGCA +
Preference number: 3 (lower is better)
Translates to: YLAHFADLEAET*VRLLTKSPPVA
Trigger: TGCCACAGGTGGACTTTTAGTAAGTAACCTAACCCATGTTTCAGCTTCTAAATCTGCAAAATGAGCAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
3UTR CCA 72 bp GAGGTTTGTGACCCTGTAGCCACTGTAAATGTTCCATaGATAAAAGTTCGTTTAGTCTGCAATACTCTTTTC +
Preference number: 3 (lower is better)
Translates to: EVCDPVATVNVP*IKVRLVCNTLF
Trigger: GAAAAGAGTATTGCAGACTAAACGAACTTTTATCCATGGAACATTTACAGTGGCTACAGGGTCACAAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CAA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTTGTCAGTTGAGTGCTTaGAAGGTACTCAATATACTC +
Preference number: 3 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCCQLSA*KVLNIL
Trigger: GAGTATATTGAGTACCTTCAAAGCACTCAACTGACA...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR-3UTR CAA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTAACAAGCTGTTGCTTTaGCTAATTAGTCACCAATTC +
Preference number: 3 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCNKLLL*LISHQF
Trigger: GAATTGGTGACTAATTAGCAAAAGCAACAGCTTGTT...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TTTAAGATTGATGTACGTACGTTTGACTTGGTCTCGCTGTCGGTTAACACAGAGGGAGCCTTGGGAGGCTaGAGTCCAGAGCCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: FKIDVRTFDLVSLSVNTEGALGG*SPEPPQ
Trigger: CTGCGGCGGCTCTGGACTGCAGCCTCCCAAGGCTCC...CTCTGTGTTAACCGACAGCGAGACCAAGTCAAACGTACGTACATCAATCTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
3UTR CAA 72 bp GCTGAGTGCATGGGGGTGTGCAGTGGGGCGTTCACATaGATTATAAACTGCATCCAGGAGGTTTGTGACCCT +
Preference number: 4 (lower is better)
Translates to: AECMGVCSGAFT*IINCIQEVCDP
Trigger: AGGGTCACAAACCTCCTGGATGCAGTTTATAATCAATGTGAACGCCCCACTGCACACCCCCATGCACTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTGAGTGCATGGGGGTGTaGAGTGGGGCGTTCACATTG +
Preference number: 4 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPECMGV*SGAFTL
Trigger: CAATGTGAACGCCCCACTGCACACCCCCATGCACTC...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTGGCAGGCACTGCAGGTaGCTCCTCTCTTATATGGCC +
Preference number: 4 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPGRHCR*LLSYMA
Trigger: GGCCATATAAGAGAGGAGCCACCTGCAGTGCCTGCC...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGGGAGCCTTGGGAGGCTaGAGTCCAGAGCCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQGALGG*SPEPPQ
Trigger: CTGCGGCGGCTCTGGACTGCAGCCTCCCAAGGCTCC...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS-3UTR CCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCCACGCATGCTTTGTCTaGCATGGAGCCTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PPASASSMCSLNSIFTCLHACFV*HGALGG
Trigger: GCCTCCCAAGGCTCCATGCCAGACAAAGCATGCGTG...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CAA 72 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTaGTCATTATTGGGGCAGGCACTGCAGGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRCRLTQRLSKH*SLLGQALQVAP
Trigger: AGGAGCCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAAAGCCGCCGCAGTTTCTaGGAGTGTGATTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSESRRSF*ECDCLS
Trigger: ACTCAGGCAATCACACTCTCAGAAACTGCGGCGGCT...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TTTAAGATTGATGTACGTACGTTTGACTTGGTCTCGCTGTCGGTTAACACAGAGTCTGGCATGGAGCCTTaGGAGGCTGCAGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: FKIDVRTFDLVSLSVNTESGMEP*EAAVQS
Trigger: GCTCTGGACTGCAGCCTCCCAAGGCTCCATGCCAGA...CTCTGTGTTAACCGACAGCGAGACCAAGTCAAACGTACGTACATCAATCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp GTACGTACGTTTGACTTGGTCTCGCTGTCGGTTAACACAGAGATTGTCCAAACATTTGGGTGCAGCTTGTaGGGTGGCTTCAGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: VRTFDLVSLSVNTEIVQTFGCSL*GGFSRV
Trigger: TACACGGCTGAAGCCACCCCACAAGCTGCACCCAAA...TGTTTGGACAATCTCTGTGTTAACCGACAGCGAGACCAAGTCAAACGTACGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
3UTR CAA 72 bp GTGACCTTCCATGCCATATCCCTGAACTACTCTGGGTaGTATTCCATGGAGGTGCTTTCCTACCTCCACACT +
Preference number: 4 (lower is better)
Translates to: VTFHAISLNYSG*YSMEVLSYLHT
Trigger: AGTGTGGAGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCATGGAAGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCATGCAAGAAGATCCCTaGGCTCTGCTGTCATGCCTC +
Preference number: 4 (lower is better)
Translates to: PPASASSMCSLNSIFTCLMQEDP*ALLSCL
Trigger: GAGGCATGACAGCAGAGCTCAGGGATCTTCTTGCAT...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp GTACGTACGTTTGACTTGGTCTCGCTGTCGGTTAACACAGAGATTGTCCAAACAGAAGTGAAGTTTGGGTaGAGCTTGTGGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VRTFDLVSLSVNTEIVQTEVKFG*SLWGGF
Trigger: GAAGCCACCCCACAAGCTGCACCCAAACTTCACTTC...TGTTTGGACAATCTCTGTGTTAACCGACAGCGAGACCAAGTCAAACGTACGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR GCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAATATTGGGGCAGGCACTaGAGGTGGCTCCTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSEYWGRH*RWLLSY
Trigger: ATAAGAGAGGAGCCACCTGCAGTGCCTGCCCCAATA...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATTGGGGCAGGCACTGCATATTGGGGCAGGCACTaGAGGTGGCTCCTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: SVNTEIVQTLVIIGAGTAYWGRH*RWLLSY
Trigger: ATAAGAGAGGAGCCACCTGCAGTGCCTGCCCCAATA...TGCAGTGCCTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATTGGGGCAGGTGCAGCTTGTGGGGTaGCTTCAGCCGTGTATTATG +
Preference number: 4 (lower is better)
Translates to: SRCRLTQRLSKHLSLLGQVQLVG*LQPCIM
Trigger: CATAATACACGGCTGAAGCCACCCCACAAGCTGCAC...CTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp AGTGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAGGCAGGCACTGCAGGTaGCTCCTCTCTTATATGGCC +
Preference number: 4 (lower is better)
Translates to: SVSVTWIYGPAWIYNRVVGRHCR*LLSYMA
Trigger: GGCCATATAAGAGAGGAGCCACCTGCAGTGCCTGCC...TACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp ATGAGAAAGAGAGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATAGCCGCCGCAGTTTCTaGGAGTGTGATTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: MRKREVYLLRGYMGQPGYSRRSF*ECDCLS
Trigger: ACTCAGGCAATCACACTCTCAGAAACTGCGGCGGCT...ATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCTCTCTTTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCTCTCTCCCAGTGAAGTaGAGTTTGGGTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PPASASSMCSLNSIFTCLSLPVK*SLGAAC
Trigger: ACAAGCTGCACCCAAACTTCACTTCACTGGGAGAGA...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCACTCAGCCCACAGCTTTaGAAACCTAGCCGACTTCAG +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSLSPQL*KPSRLQ
Trigger: CTGAAGTCGGCTAGGTTTGCAAAGCTGTGGGCTGAG...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCAGAAGTGAAGTTTGGGTaGAGCTTGTGGGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSEVKFG*SLWGGF
Trigger: GAAGCCACCCCACAAGCTGCACCCAAACTTCACTTC...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAAACCCAGGGCAGCCAGTaGATCTTCTGTAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSETQGSQ*IFCRNA
Trigger: TGCATTTCTACAGAAGATGCACTGGCTGCCCTGGGT...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTCATGCTTTTGCAATTTaGGCTAGTGCTGGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPHAFAI*ASAGSQ
Trigger: TTGGGACCCAGCACTAGCCCAAATTGCAAAAGCATG...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTAGTGTATCTGTTACGTaGATATATGGGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPSVSVT*IYGPAW
Trigger: CCAGGCTGGCCCATATATCCACGTAACAGATACACT...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAACAGCCGTGTATTATGTaGAAACTGGCAATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSEQPCIM*KLAIAG
Trigger: GCCAGCAATTGCCAGTTTTCACATAATACACGGCTG...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATTGGGGCAGCGTCATACCAGTTTGTaGTGGCGGAAGACACAGAAA +
Preference number: 4 (lower is better)
Translates to: SRCRLTQRLSKHLSLLGQRHTSL*WRKTQK
Trigger: TTTCTGTGTCTTCCGCCATCACAAACTGGTATGACG...CTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATAGGCATATTTTGAGCTaGGTGCATGGGGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNRHILS*VHGGVQ
Trigger: CTGCACACCCCCATGCACTCAGCTCAAAATATGCCT...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAACCTCAGCCCACAGCTTTaGAAACCTAGCCGACTTCAG +
Preference number: 4 (lower is better)
Translates to: CICYVDIWASLDIQQSSNLSPQL*KPSRLQ
Trigger: CTGAAGTCGGCTAGGTTTGCAAAGCTGTGGGCTGAG...GTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATTTTGGGTGCAGCTTGTaGGGTGGCTTCAGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYFGCSL*GGFSRV
Trigger: TACACGGCTGAAGCCACCCCACAAGCTGCACCCAAA...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCACTGGGTTGTATTCCATaGAGGTGCTTTCCTACCTCC +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSLGCIP*RCFPTS
Trigger: GGAGGTAGGAAAGCACCTCCATGGAATACAACCCAG...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCCAGTTTCTGAGAGTGTaGTTGCCTGAGTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSQFLRV*LPECSA
Trigger: GGCTGAGCACTCAGGCAATCACACTCTCAGAAACTG...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAACTCTCTCCCAGTGAAGTaGAGTTTGGGTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: CICYVDIWASLDIQQSSNSLPVK*SLGAAC
Trigger: ACAAGCTGCACCCAAACTTCACTTCACTGGGAGAGA...GTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAATCCATGCCATATCCCTaGACTACTCTGGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSESMPYP*TTLGCI
Trigger: AATACAACCCAGAGTAGTTCAGGGATATGGCATGGA...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATCATCCAGGAGGTTTGTaGCCCTGTAGCCACTGTAAA +
Preference number: 4 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNHPGGL*PCSHCK
Trigger: TTTACAGTGGCTACAGGGTCACAAACCTCCTGGATG...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTTGCTTCCATAACACCTaGCTTATTTCTTATGGCCCT +
Preference number: 4 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPCFHNT*LISYGP
Trigger: AGGGCCATAAGAAATAAGGCAGGTGTTATGGAAGCA...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAATCTCCTGGGGGTTCTTaGTTCATTATTCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSESPGGS*FIIPFL
Trigger: AAGGAAGGGAATAATGAAGCAAGAACCCCCAGGAGA...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTTCTGGCATGGAGCCTTaGGAGGCTGCAGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCSGMEP*EAAVQS
Trigger: GCTCTGGACTGCAGCCTCCCAAGGCTCCATGCCAGA...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TTAATGAAACAATTTAAGATTGATGTACGTACGTTTGACTTGGTCTCGCTGTCGCACGCATGCTTTGTCTaGCATGGAGCCTTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LMKQFKIDVRTFDLVSLSHACFV*HGALGG
Trigger: GCCTCCCAAGGCTCCATGCCAGACAAAGCATGCGTG...CGACAGCGAGACCAAGTCAAACGTACGTACATCAATCTTAAATTGTTTCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCACTTATATGGCCAAGTTaGGTAATTCCCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSLIWPS*VIPSWS
Trigger: GGACCAGGAGGGAATTACCCAACTTGGCCATATAAG...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATAACACTTGTCATTATTaGGGCAGGCACTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNNTCHY*GRHCRW
Trigger: CCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTT...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAACAACACTTGTCATTATTaGGGCAGGCACTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CICYVDIWASLDIQQSSNNTCHY*GRHCRW
Trigger: CCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTT...GTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAATCTTCACCTGTCTCCTaGGGGTTCTTGCTTCATTAT +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSESSPVS*GFLLHY
Trigger: ATAATGAAGCAAGAACCCCCAGGAGACAGGTGAAGA...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CAA 72 bp TGGATTGACAGTCCTCTCCTGACCTCTGGTCTGTGCTaGGAAAAGACTCTTTGTTGTGAAAGATACAAACCC +
Preference number: 4 (lower is better)
Translates to: WIDSPLLTSGLC*EKTLCCERYKP
Trigger: GGGTTTGTATCTTTCACAACAAAGAGTCTTTTCCAAGCACAGACCAGAGGTCAGGAGAGGACTGTCAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp AAACAATTTAAGATTGATGTACGTACGTTTGACTTGGTCTCGCTGTCGGTTAACCAGTTTCTGAGAGTGTaGTTGCCTGAGTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: KQFKIDVRTFDLVSLSVNQFLRV*LPECSA
Trigger: GGCTGAGCACTCAGGCAATCACACTCTCAGAAACTG...GTTAACCGACAGCGAGACCAAGTCAAACGTACGTACATCAATCTTAAATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp TGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAACCAGCCGTGTATTATGTaGAAACTGGCAATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CICYVDIWASLDIQQSSNQPCIM*KLAIAG
Trigger: GCCAGCAATTGCCAGTTTTCACATAATACACGGCTG...GTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAATGCATATCCGAGTCTTaGAGTCATAGTCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSECISES*SHSPGF
Trigger: AAATCCAGGACTATGACTTCAAGACTCGGATATGCA...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp GAGATTGTCCAAACACTTGTCATTATTGGGGCAGGCACTGCAGGTGGCTCCTCTAATCACCTAAAAATGTaGTACTGTACCTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: EIVQTLVIIGAGTAGGSSNHLKM*YCTLLI
Trigger: AATGAGCAAGGTACAGTAGCACATTTTTAGGTGATT...AGAGGAGCCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTTGGACAATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR GCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCACTGACCTCTGGTCTGTaGTTGGAAAAGACTCTTTGT +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSLTSGL*LEKTLC
Trigger: ACAAAGAGTCTTTTCCAAGCACAGACCAGAGGTCAG...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCATGTATTCCATGGAGGTaGTTTCCTACCTCCACACTT +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSCIPWR*FPTSTL
Trigger: AAGTGTGGAGGTAGGAAAGCACCTCCATGGAATACA...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TTTAAGATTGATGTACGTACGTTTGACTTGGTCTCGCTGTCGGTTAACACAGAGCATGCTTTTGCAATTTaGGCTAGTGCTGGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FKIDVRTFDLVSLSVNTEHAFAI*ASAGSQ
Trigger: TTGGGACCCAGCACTAGCCCAAATTGCAAAAGCATG...CTCTGTGTTAACCGACAGCGAGACCAAGTCAAACGTACGTACATCAATCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATTGGGGCAGGTATTATGTGAAAACTaGCAATTGCTGGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: SRCRLTQRLSKHLSLLGQVLCEN*QLLAHA
Trigger: AGCATGGGCCAGCAATTGCCAGTTTTCACATAATAC...CTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGGTGCAGCTTGTGGGGTaGCTTCAGCCGTGTATTATG +
Preference number: 4 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQVQLVG*LQPCIM
Trigger: CATAATACACGGCTGAAGCCACCCCACAAGCTGCAC...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS-3UTR CCA 90 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATTGGGGCAGTGTTACGTGGATATATaGGCCAGCCTGGATATACAA +
Preference number: 4 (lower is better)
Translates to: SRCRLTQRLSKHLSLLGQCYVDI*ASLDIQ
Trigger: TTGTATATCCAGGCTGGCCCATATATCCACGTAACA...CTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp TGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAACAGTGTATCTGTTACGTaGATATATGGGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CICYVDIWASLDIQQSSNSVSVT*IYGPAW
Trigger: CCAGGCTGGCCCATATATCCACGTAACAGATACACT...GTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATTGGGGCAGCTAAAAGTCCACCTGTaGCAACCTGCAAATAATGCT +
Preference number: 4 (lower is better)
Translates to: SRCRLTQRLSKHLSLLGQLKVHL*QPANNA
Trigger: AGCATTATTTGCAGGTTGCCACAGGTGGACTTTTAG...CTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAATTCCACAACCATGGTTaGAGTCTTTCAGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSEFHNHG*SLSGKI
Trigger: AATCTTCCCTGAAAGACTCCAACCATGGTTGTGGAA...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGACGTCATACCAGTTTGTaGTGGCGGAAGACACAGAAA +
Preference number: 4 (lower is better)
Translates to: TWISHHLRLKDADRSYSGRHTSL*WRKTQK
Trigger: TTTCTGTGTCTTCCGCCATCACAAACTGGTATGACG...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCATCATGCCATTTCTTCTaGTGCATCCTCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSSCHFF*CILFCI
Trigger: AATGCAGAAGAGGATGCATCAGAAGAAATGGCATGA...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCAAAAGACTCTTTGTTGTaGAAGATACAAACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSKDSLL*KIQTQG
Trigger: GCCCTGGGTTTGTATCTTTCACAACAAAGAGTCTTT...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCGACTTGCTTAGGACATaGCTTCTCCTCTACATTATT +
Preference number: 4 (lower is better)
Translates to: PPASASSMCSLNSIFTCLDLLRT*LLLYII
Trigger: AATAATGTAGAGGAGAAGTCATGTCCTAAGCAAGTC...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCACTTCTGCTCAGCATGTaGACTCATTGCTTTCTACAT +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSLLLSM*THCFLH
Trigger: ATGTAGAAAGCAATGAGTTCACATGCTGAGCAGAAG...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTTTCTGGCTTTTATTCTaGATGCCACTACCTTTATTC +
Preference number: 4 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPFWLLF*MPLPLF
Trigger: GAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAA...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATTGGGGCAGAAAACTGGCAATTGCTaGCCCATGCTTTTGCAATTT +
Preference number: 4 (lower is better)
Translates to: SRCRLTQRLSKHLSLLGQKTGNC*PMLLQF
Trigger: AAATTGCAAAAGCATGGGCCAGCAATTGCCAGTTTT...CTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCAGTATTATGTGAAAACTaGCAATTGCTGGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSVLCEN*QLLAHA
Trigger: AGCATGGGCCAGCAATTGCCAGTTTTCACATAATAC...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATATCCCTGAACTACTCTaGGTTGTATTCCATGGAGGT +
Preference number: 4 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNIPELL*VVFHGG
Trigger: ACCTCCATGGAATACAACCCAGAGTAGTTCAGGGAT...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CAA 72 bp AGTGACACACTGAAGGGAGAGGGCTCACCAGCAATATaGTACATAGACTGGGTCAGAAACAGATATAATACA +
Preference number: 4 (lower is better)
Translates to: SDTLKGEGSPAI*YIDWVRNRYNT
Trigger: TGTATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCCCTTCAGTGTGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp GAAAGAGAGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAATGCATATCCGAGTCTTaGAGTCATAGTCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: EREKCICYVDIWASLDIQCISES*SHSPGF
Trigger: AAATCCAGGACTATGACTTCAAGACTCGGATATGCA...TTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCTCTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCTCACACTTTTGGCATTaGTTAGATAGTTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: PPASASSMCSLNSIFTCLSHFWH*LDSWLL
Trigger: TAGAAGCCAACTATCTAATCAATGCCAAAAGTGTGA...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGAACTTTTCTGAATCAGTaGCCTTCCATGCCATATCCC +
Preference number: 4 (lower is better)
Translates to: TWISHHLRLKDADRSYSGTFLNQ*PSMPYP
Trigger: GGGATATGGCATGGAAGGTCACTGATTCAGAAAAGT...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATCTTCTCACACTTTTCTaGATCAGTGACCTTCCATGC +
Preference number: 4 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYLLTLF*ISDLPC
Trigger: GCATGGAAGGTCACTGATTCAGAAAAGTGTGAGAAG...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAAATGTTGGCTGTATATTaGATGAACAAGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: ARRSLSSAVMPLKEELSEMLAVY*MNKLLL
Trigger: AAGCAACAGCTTGTTCATTCAATATACAGCCAACAT...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCAACCTGTCAGTTGAGTaGTTTGAAGGTACTCAATAT +
Preference number: 4 (lower is better)
Translates to: PPASASSMCSLNSIFTCLNLSVE*FEGTQY
Trigger: ATATTGAGTACCTTCAAAGCACTCAACTGACAGGTT...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGAAGATCCCTGAGCTCTaGTGTCATGCCTCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQKIPEL*CHASQR
Trigger: TCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTT...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTATTATTGTGACTGTGTaGTCTATGGTTGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPIIVTV*SMVVLV
Trigger: AACAAGAACAACCATAGAGCACACAGTCACAATAAT...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATGATCGGAACTTGTTATaGATTCGAACGCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNDRNLL*IRTQSL
Trigger: CAAAGACTGCGTTCGAATCCATAACAAGTTCCGATC...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCCTCTTCTCTCACGTATaGGTTTTCTTCCACCTGCAT +
Preference number: 4 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSLFSHV*VFFHLH
Trigger: ATGCAGGTGGAAGAAAACCCATACGTGAGAGAAGAG...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp AGTGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTACTTATATGGCCAAGTTaGGTAATTCCCTCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SVSVTWIYGPAWIYNRVVLIWPS*VIPSEC
Trigger: ACACTCAGAGGGAATTACCCAACTTGGCCATATAAG...TACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATTGTTGGTTTCACCTCTaGTCGGAACTTGTTATGGAT +
Preference number: 4 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYCWFHL*SELVMD
Trigger: ATCCATAACAAGTTCCGATCAGAGGTGAAACCAACA...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTCAGAGTAGTAACGTTTaGCTTGGTCTCGCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCQSSNV*LGLAVG
Trigger: ACCGACAGCGAGACCAAGTCAAACGTTACTACTCTG...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCAAGGAAAAACCAATTGTaGAACCTAAGGAAGGTAATG +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSRKNQL*NLRKVM
Trigger: CATTACCTTCCTTAGGTTTCACAATTGGTTTTTCCT...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCATATGTCTGGCTCACATaGATAGCAAAGTTCATAGAT +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSYVWLT*IAKFID
Trigger: ATCTATGAACTTTGCTATTCATGTGAGCCAGACATA...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATCTTCTATGTGTTCTTTaGATTCCATCTTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNLLCVL*IPSSPV
Trigger: GACAGGTGAAGATGGAATTCAAAGAACACATAGAAG...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAACTTCCTCATAATGCACTaGCAGAATTCACATAGCTCT +
Preference number: 4 (lower is better)
Translates to: CICYVDIWASLDIQQSSNFLIMH*QNSHSS
Trigger: AGAGCTATGTGAATTCTGTCAGTGCATTATGAGGAA...GTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR GCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATGGCTTTTATTCTGCATaGCACTACCTTTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYGFYSA*HYLYSR
Trigger: CCTGGAATAAAGGTAGTGGCATGCAGAATAAAAGCC...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGTTGTCAGGTGTCTTCTaGTTCATTTCCTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQLSGVF*FISFPT
Trigger: GGTGGGAAAGGAAATGAAGCAGAAGACACCTGACAA...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATTGTATAGCATATCACTaGCTGTTGGTTTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYCIAYH*LLVSPL
Trigger: CAGAGGTGAAACCAACAGCCAGTGATATGCTATACA...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATAAAACTGGCAATTGCTaGCCCATGCTTTTGCAATTT +
Preference number: 4 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNKTGNC*PMLLQF
Trigger: AAATTGCAAAAGCATGGGCCAGCAATTGCCAGTTTT...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATCTAAAAGTCCACCTGTaGCAACCTGCAAATAATGCT +
Preference number: 4 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYLKVHL*QPANNA
Trigger: AGCATTATTTGCAGGTTGCCACAGGTGGACTTTTAG...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTTCCTCTCCTGACCTCTaGTCTGTGCTTGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCSSPDL*SVLGKD
Trigger: GTCTTTTCCAAGCACAGACCAGAGGTCAGGAGAGGA...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTCATGGGGGTGTGCAGTaGGGCGTTCACATTGATTAT +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCHGGVQ*GVHIDY
Trigger: ATAATCAATGTGAACGCCCCACTGCACACCCCCATG...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGTACGTACGTTTGACTTaGTCTCGCTGTCGGTTAACA +
Preference number: 4 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQYVRLT*SRCRLT
Trigger: TGTTAACCGACAGCGAGACCAAGTCAAACGTACGTA...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp GAAAGAGAGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAAAAAGCCATATGTGAATaGGGTTGGTTTTTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: EREKCICYVDIWASLDIQKAICE*GWFLGF
Trigger: AAAACCCAAAAACCAACCTCATTCACATATGGCTTT...TTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCTCTCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGATGGCTGTATATTGAATaGACAAGCTGTTGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TWISHHLRLKDADRSYSGWLYIE*TSCCFC
Trigger: GCAAAAGCAACAGCTTGTTCATTCAATATACAGCCA...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGTTCAGGGAAGATTTGTaGTTGACGGGGAAAATGATG +
Preference number: 4 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQFREDL*LTGKMM
Trigger: CATCATTTTCCCCGTCAATCACAAATCTTCCCTGAA...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATATCAGTCTAAAAACTTaGCTTCTTCCTTGCAACGTG +
Preference number: 4 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYISLKT*LLPCNV
Trigger: CACGTTGCAAGGAAGAAGTCAAGTTTTTAGACTGAT...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp TGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACAGAGTAGTAACCAGAGTAGTAACCTGTaGAACAAACATAGAATATCC +
Preference number: 4 (lower is better)
Translates to: CICYVDIWASLDIQQSSNQSSNL*NKHRIS
Trigger: GGATATTCTATGTTTGTTTCACAGGTTACTACTCTG...GTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR GCA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGATTCCCTTTCTACTTCTaGTCAGCATGTGAACTCATT +
Preference number: 4 (lower is better)
Translates to: TWISHHLRLKDADRSYSGFPFYF*SACELI
Trigger: AATGAGTTCACATGCTGAGCAGAAGTAGAAAGGGAA...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGTGTATAGCATATCACTaGCTGTTGGTTTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQCIAYH*LLVSPL
Trigger: CAGAGGTGAAACCAACAGCCAGTGATATGCTATACA...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS-3UTR CCA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCAATTGTGGTTTTTAAATaGCAGAAATCACTTTCGCAC +
Preference number: 4 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSIVVFK*QKSLSH
Trigger: GTGCGAAAGTGATTTCTGCCATTTAAAAACCACAAT...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATATAATGCTATGTAAGTaGGAGACAGGTCAGTTATAC +
Preference number: 4 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNIMLCK*ETGQLY
Trigger: GTATAACTGACCTGTCTCCCACTTACATAGCATTAT...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGAAAAGCCATATGTGAATaGGGTTGGTTTTTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TWISHHLRLKDADRSYSGKAICE*GWFLGF
Trigger: AAAACCCAAAAACCAACCTCATTCACATATGGCTTT...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATTGTGATCCTGTACTTTaGATGGTAAGAAAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYCDPVL*MVRKSC
Trigger: GCAACTTTTTCTTACCATTCAAAGTACAGGATCACA...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTGTGAAAACTGGCAATTaGTGGCCCATGCTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCVKTGN*WPMLLQ
Trigger: TTGCAAAAGCATGGGCCAGCAATTGCCAGTTTTCAC...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR GCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGAAGGATATTGTGACTTaGTTAGGACATGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQKDIVT*LGHDFS
Trigger: GGAGAAGTCATGTCCTAAGCAAGTCACAATATCCTT...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGCATTATTCCCTTCCTTaGCTATATCCTAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQHYSLP*LYPKAF
Trigger: GAAGGCTTTAGGATATAGCCAAGGAAGGGAATAATG...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266659.8
3UTR CAA 72 bp ATGAAACAATTTAAGATTGATGTACGTACGTTTGACTaGGTCTCGCTGTCGGTTAACACAGAGATTGTCCAA +
Preference number: 4 (lower is better)
Translates to: MKQFKIDVRTFD*VSLSVNTEIVQ
Trigger: TTGGACAATCTCTGTGTTAACCGACAGCGAGACCAAGTCAAACGTACGTACATCAATCTTAAATTGTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR TCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTGTTACTCCTCTGTTCTaGATCTGGGGAAGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCVTPLF*IWGSSK
Trigger: TTTACTACTTCCCCAGATTCAGAACAGAGGAGTAAC...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTTTGGCAACATTATTGTaGCTGTGTGCTCTATGGTTG +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCLATLL*LCALWL
Trigger: CAACCATAGAGCACACAGTCACAATAATGTTGCCAA...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTTGGGTAATTCCCTCCTaGTCCGTAGTTGCATATAAA +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCWVIPS*SVVAYK
Trigger: TTTATATGCAACTACGGACCAGGAGGGAATTACCCA...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTTGTTACGTGGATATATaGGCCAGCCTGGATATACAA +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCCYVDI*ASLDIQ
Trigger: TTGTATATCCAGGCTGGCCCATATATCCACGTAACA...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGAGGAAGTTTTGGATCATaGAGGAAATTGATAGTAGTT +
Preference number: 4 (lower is better)
Translates to: TWISHHLRLKDADRSYSGGSFGS*RKLIVV
Trigger: AACTACTATCAATTTCCTCCATGATCCAAAACTTCC...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR TCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTCTATTAGTGCGAAAGTaGTTGTGGTTTTTAAATGGC +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCLLVRK*LWFLNG
Trigger: GCCATTTAAAAACCACAATCACTTTCGCACTAATAG...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CCA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTCTGCCTTATTTCTTATaGCCCTTTCTTGTAGTAATT +
Preference number: 4 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCLPYFL*PFLVVI
Trigger: AATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS TCA 90 bp GCCTTGGGAGGCTGCAGTCCAGAGCCGCCGCAGTTTCTGAGAGTGTaGTTGCCTGAGTGCTCAGCCCACAGCTTTGCAAACCTAGCCGAC +
Preference number: 5 (lower is better)
Translates to: ALGGCSPEPPQFLRV*LPECSAHSFANLAD
Trigger: GTCGGCTAGGTTTGCAAAGCTGTGGGCTGAGCACTCAGGCAATCACACTCTCAGAAACTGCGGCGGCTCTGGACTGCAGCCTCCCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS TCA 90 bp GGCATGGAGCCTTGGGAGGCTGCAGTCCAGAGCCGCCGCAGTTTCTaGGAGTGTGATTGCCTGAGTGCTCAGCCCACAGCTTTGCAAACC +
Preference number: 5 (lower is better)
Translates to: GMEPWEAAVQSRRSF*ECDCLSAQPTALQT
Trigger: GGTTTGCAAAGCTGTGGGCTGAGCACTCAGGCAATCACACTCTCAGAAACTGCGGCGGCTCTGGACTGCAGCCTCCCAAGGCTCCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS TCA 90 bp AGGCTGCAGTCCAGAGCCGCCGCAGTTTCTGAGAGTGTGATTGCCTaGGTGCTCAGCCCACAGCTTTGCAAACCTAGCCGACTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: RLQSRAAAVSESVIA*VLSPQLCKPSRLQL
Trigger: AAGCTGAAGTCGGCTAGGTTTGCAAAGCTGTGGGCTGAGCACTCAGGCAATCACACTCTCAGAAACTGCGGCGGCTCTGGACTGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS CCA 90 bp GTCCAGATGTTCTCTCCCAGTGAAGTGAAGTTTGGGTGCAGCTTGTaGGGTGGCTTCAGCCGTGTATTATGTGAAAACTGGCAATTGCTG +
Preference number: 5 (lower is better)
Translates to: VQMFSPSEVKFGCSL*GGFSRVLCENWQLL
Trigger: CAGCAATTGCCAGTTTTCACATAATACACGGCTGAAGCCACCCCACAAGCTGCACCCAAACTTCACTTCACTGGGAGAGAACATCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
ENST00000550491.1
CDS CCA 90 bp AGAGATTGTCCAAACACTTGTCATTATTGGGGCAGGCACTGCAGGTaGCTCCTCTCTTATATGGCCAAGTTGGGTAATTCCCTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: RDCPNTCHYWGRHCR*LLSYMAKLGNSLLV
Trigger: GACCAGGAGGGAATTACCCAACTTGGCCATATAAGAGAGGAGCCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTTGGACAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000550491.1
CDS-3UTR CAA 90 bp GTACGTACGTTTGACTTGGTCTCGCTGTCGGTTAACACAGAGATTGTCCAAACATGTGACACGCATGCTTaGTCTGGCATGGAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: VRTFDLVSLSVNTEIVQTCDTHA*SGMEPW
Trigger: CCAAGGCTCCATGCCAGACAAAGCATGCGTGTCACA...TGTTTGGACAATCTCTGTGTTAACCGACAGCGAGACCAAGTCAAACGTACGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS CCA 90 bp ATTGAACTGCGCAGCCAACTTTGTAACTATCTGCCCAAACAACCCTaGATTTTCTCGCGCGAGATTCAAGAACCCTCTCTTGGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: IELRSQLCNYLPKQP*IFSREIQEPSLGVW
Trigger: CCAAACCCCAAGAGAGGGTTCTTGAATCTCGCGCGAGAAAATCCAGGGTTGTTTGGGCAGATAGTTACAAAGTTGGCTGCGCAGTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456650.7
CDS-3UTR CAA 90 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATTGGGGCAGTGCTGGCCCATGCTTTaGCAATTTGGGCTAGTGCTG +
Preference number: 5 (lower is better)
Translates to: SRCRLTQRLSKHLSLLGQCWPML*QFGLVL
Trigger: CAGCACTAGCCCAAATTGCAAAAGCATGGGCCAGCA...CTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CAA 90 bp GAGATTGTCCAAACACTTGTCATTATTGGGGCAGGCACTGCAGGTGGCTCCTCTTGGCCACAGACTTTTTaGCATATCCGAGTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: EIVQTLVIIGAGTAGGSSWPQTF*HIRVLK
Trigger: CTTCAAGACTCGGATATGCAAAAAAGTCTGTGGCCA...AGAGGAGCCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTTGGACAATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CAA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTGTCTCCTGGGGGTTCTaGCTTCATTATTCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPVSWGF*LHYSLP
Trigger: AGGAAGGGAATAATGAAGCAAGAACCCCCAGGAGAC...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATTGGGGCAGGTACGTACGTTTGACTaGGTCTCGCTGTCGGTTAAC +
Preference number: 5 (lower is better)
Translates to: SRCRLTQRLSKHLSLLGQVRTFD*VSLSVN
Trigger: GTTAACCGACAGCGAGACCAAGTCAAACGTACGTAC...CTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CAA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCTGTGACACGCATGCTTaGTCTGGCATGGAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSCDTHA*SGMEPW
Trigger: CCAAGGCTCCATGCCAGACAAAGCATGCGTGTCACA...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTAGATTGTCCAAACACTaGTCATTATTGGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPRLSKH*SLLGQA
Trigger: TGCCTGCCCCAATAATGACAAGTGTTTGGACAATCT...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS GCA 90 bp AACTTTAGGGCAAAATTGAACTGCGCAGCCAACTTTGTAACTATCTaGCCAAACAACCCTGGATTTTCTCGCGCGAGATTCAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: NFRAKLNCAANFVTI*PNNPGFSRARFKNP
Trigger: AGGGTTCTTGAATCTCGCGCGAGAAAATCCAGGGTTGTTTGGGCAGATAGTTACAAAGTTGGCTGCGCAGTTCAATTTTGCCCTAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456650.7
CDS CCA 90 bp GTATTATGTGAAAACTGGCAATTGCTGGCCCATGCTTTTGCAATTTaGGCTAGTGCTGGGTCCCAAGTCATGTATAGCATATCACTGGCT +
Preference number: 5 (lower is better)
Translates to: VLCENWQLLAHAFAI*ASAGSQVMYSISLA
Trigger: AGCCAGTGATATGCTATACATGACTTGGGACCCAGCACTAGCCCAAATTGCAAAAGCATGGGCCAGCAATTGCCAGTTTTCACATAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CCA 90 bp GAGAAAGAGAGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTaGATATACAACAGAGTAGTAACGTTTGACTTGGTCTCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: EKERSVSVTWIYGPA*IYNRVVTFDLVSLS
Trigger: CGACAGCGAGACCAAGTCAAACGTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCTCTCTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp TTAATGAAACAATTTAAGATTGATGTACGTACGTTTGACTTGGTCTCGCTGTCGAAGTTTGGGTGCAGCTaGTGGGGTGGCTTCAGCCGT +
Preference number: 5 (lower is better)
Translates to: LMKQFKIDVRTFDLVSLSKFGCS*WGGFSR
Trigger: ACGGCTGAAGCCACCCCACAAGCTGCACCCAAACTT...CGACAGCGAGACCAAGTCAAACGTACGTACATCAATCTTAAATTGTTTCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CAA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCATCTTATATGGCCAAGTaGGGTAATTCCCTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSSYMAK*GNSLLV
Trigger: GACCAGGAGGGAATTACCCAACTTGGCCATATAAGA...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp ATGAGAAAGAGAGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATAAACACTTGTCATTATaGGGGCAGGCACTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: MRKREVYLLRGYMGQPGYKHLSL*GQALQV
Trigger: CACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTT...ATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCTCTCTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CAA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCCTTATCCCTCCTACTTaGTCTGCCATTGAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: PPASASSMCSLNSIFTCLLIPPT*SAIEAS
Trigger: AGAAGCTTCAATGGCAGACAAAGTAGGAGGGATAAG...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS GCA 90 bp CCAAGTTGGGTAATTCCCTCCTGGTCCGTAGTTGCATATAAAATGTaGTCCATTGGAAAGAGCGTCAAAGCCAGAAACTTTAGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: PSWVIPSWSVVAYKM*SIGKSVKARNFRAK
Trigger: TTTTGCCCTAAAGTTTCTGGCTTTGACGCTCTTTCCAATGGAGCACATTTTATATGCAACTACGGACCAGGAGGGAATTACCCAACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000550491.1
CDS-3UTR CAA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGAGCATATCACTGGCTGTaGGTTTCACCTCTGATCGGA +
Preference number: 5 (lower is better)
Translates to: TWISHHLRLKDADRSYSGAYHWL*VSPLIG
Trigger: TCCGATCAGAGGTGAAACCAACAGCCAGTGATATGC...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGTGCTGGCCCATGCTTTaGCAATTTGGGCTAGTGCTG +
Preference number: 5 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQCWPML*QFGLVL
Trigger: CAGCACTAGCCCAAATTGCAAAAGCATGGGCCAGCA...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS-3UTR CAA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTAAGTTTGGGTGCAGCTaGTGGGGTGGCTTCAGCCGT +
Preference number: 5 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCKFGCS*WGGFSR
Trigger: ACGGCTGAAGCCACCCCACAAGCTGCACCCAAACTT...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATAAACACTTGTCATTATaGGGGCAGGCACTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYKHLSL*GQALQV
Trigger: CACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTT...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCCAGTGTCTGATGCTATaGGTTAGTAATGATGTCCCA +
Preference number: 5 (lower is better)
Translates to: PPASASSMCSLNSIFTCLQCLML*VSNDVP
Trigger: TGGGACATCATTACTAACCAATAGCATCAGACACTG...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCTGTAAAACCTGTCAGTaGAGTGCTTTGAAGGTACTC +
Preference number: 5 (lower is better)
Translates to: PPASASSMCSLNSIFTCLCKTCQ*SALKVL
Trigger: GAGTACCTTCAAAGCACTCAACTGACAGGTTTTACA...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAAGGATCATGGAGGAAATaGATAGTAGTTAGGGGGAAA +
Preference number: 5 (lower is better)
Translates to: ARRSLSSAVMPLKEELSEGSWRK*IVVRGK
Trigger: TTTCCCCCTAACTACTATCAATTTCCTCCATGATCC...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS GCA 90 bp ATTGGAAAGAGCGTCAAAGCCAGAAACTTTAGGGCAAAATTGAACTaGGCAGCCAACTTTGTAACTATCTGCCCAAACAACCTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: IGKSVKARNFRAKLN*AANFVTICPNNLSV
Trigger: TACACTCAGGTTGTTTGGGCAGATAGTTACAAAGTTGGCTGCGCAGTTCAATTTTGCCCTAAAGTTTCTGGCTTTGACGCTCTTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000550491.1
CDS GCA 90 bp ATTGGAAAGAGCGTCAAAGCCAGAAACTTTAGGGCAAAATTGAACTaGGCAGCCAACTTTGTAACTATCTGCCCAAACAACCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: IGKSVKARNFRAKLN*AANFVTICPNNPGF
Trigger: AAATCCAGGGTTGTTTGGGCAGATAGTTACAAAGTTGGCTGCGCAGTTCAATTTTGCCCTAAAGTTTCTGGCTTTGACGCTCTTTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456650.7
CDS-3UTR CAA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCACCTCTGATCGGAACTaGTTATGGATTCGAACGCAG +
Preference number: 5 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSTSDRN*LWIRTQ
Trigger: CTGCGTTCGAATCCATAACAAGTTCCGATCAGAGGT...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp TTTAAGATTGATGTACGTACGTTTGACTTGGTCTCGCTGTCGGTTAACACAGAGAGATTGTCCAAACACTaGTCATTATTGGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: FKIDVRTFDLVSLSVNTERLSKH*SLLGQA
Trigger: TGCCTGCCCCAATAATGACAAGTGTTTGGACAATCT...CTCTGTGTTAACCGACAGCGAGACCAAGTCAAACGTACGTACATCAATCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CAA 90 bp CCACCTGCATCAGCCTCTTCTATGTGTTCTTTGAATTCCATCTTCACCTGTCTCCGGTTAACACAGAGATaGTCCAAACACTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: PPASASSMCSLNSIFTCLRLTQR*SKHLSL
Trigger: TAATGACAAGTGTTTGGACAATCTCTGTGTTAACCG...GAGACAGGTGAAGATGGAATTCAAAGAACACATAGAAGAGGCTGATGCAGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGAGTAGTAACGTTTGACTaGGTCTCGCTGTCGGTTAAC +
Preference number: 5 (lower is better)
Translates to: TWISHHLRLKDADRSYSGVVTFD*VSLSVN
Trigger: GTTAACCGACAGCGAGACCAAGTCAAACGTTACTAC...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp GCAAGAAGATCCCTGAGCTCTGCTGTCATGCCTCTCAAAGAGGAATTATCAGAATGTCAGTTGAGTGCTTaGAAGGTACTCAATATACTC +
Preference number: 5 (lower is better)
Translates to: ARRSLSSAVMPLKEELSECQLSA*KVLNIL
Trigger: GAGTATATTGAGTACCTTCAAAGCACTCAACTGACA...TTCTGATAATTCCTCTTTGAGAGGCATGACAGCAGAGCTCAGGGATCTTCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCGGCTCACCAGCAATATaGTACATAGACTGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSGSPAI*YIDWVR
Trigger: TCTGACCCAGTCTATGTACAATATTGCTGGTGAGCC...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp TGCCATATCCCTGAACTACTCTGGGTTGTATTCCATGGAGGTGCTTTCCTACCTCAGCATGTGAACTCATaGCTTTCTACATCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: CHIPELLWVVFHGGAFLPQHVNS*LSTSLF
Trigger: AAAAAGAGATGTAGAAAGCAATGAGTTCACATGCTG...AGGTAGGAAAGCACCTCCATGGAATACAACCCAGAGTAGTTCAGGGATATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGTTGATGTACGTACGTTaGACTTGGTCTCGCTGTCGG +
Preference number: 5 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQLMYVR*TWSRCR
Trigger: CCGACAGCGAGACCAAGTCAAACGTACGTACATCAA...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CAA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGACCTCTGATCGGAACTaGTTATGGATTCGAACGCAG +
Preference number: 5 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQTSDRN*LWIRTQ
Trigger: CTGCGTTCGAATCCATAACAAGTTCCGATCAGAGGT...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS-3UTR CAA 90 bp GTACGTACGTTTGACTTGGTCTCGCTGTCGGTTAACACAGAGATTGTCCAAACAACTAAATTAGGGTACTaGTGCTGTACCAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: VRTFDLVSLSVNTEIVQTTKLGY*CCTKMV
Trigger: TACCATTTTGGTACAGCACAAGTACCCTAATTTAGT...TGTTTGGACAATCTCTGTGTTAACCGACAGCGAGACCAAGTCAAACGTACGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CAA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATACCTCTGGTCTGTGCTaGGAAAAGACTCTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYTSGLC*EKTLCC
Trigger: ACAACAAAGAGTCTTTTCCAAGCACAGACCAGAGGT...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp TCACCAATTCCTGATAGTTCTGGCTTTTATTCTGCATGCCACTACCTTTATTCCTTTCCACAACCATGGTaGGAGTCTTTCAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SPIPDSSGFYSACHYLYSFPQPW*ESFRED
Trigger: ATCTTCCCTGAAAGACTCCAACCATGGTTGTGGAAA...GGAATAAAGGTAGTGGCATGCAGAATAAAAGCCAGAACTATCAGGAATTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATAACTTGACTTCTTCCTaGCAACGTGGCTACCAAATT +
Preference number: 5 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNNLTSS*QRGYQI
Trigger: AATTTGGTAGCCACGTTGCAAGGAAGAAGTCAAGTT...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGAAGTGGGGCGTTCACATaGATTATAAACTGCATCCAG +
Preference number: 5 (lower is better)
Translates to: TWISHHLRLKDADRSYSGSGAFT*IINCIQ
Trigger: CTGGATGCAGTTTATAATCAATGTGAACGCCCCACT...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGTGGCCACAGACTTTTTaGCATATCCGAGTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQWPQTF*HIRVLK
Trigger: CTTCAAGACTCGGATATGCAAAAAAGTCTGTGGCCA...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS-3UTR CAA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATATAAAATGTGCTCCATaGGAAAGAGCGTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYIKCAP*ERASKP
Trigger: TGGCTTTGACGCTCTTTCCAATGGAGCACATTTTAT...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp GAAAGAGAGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTGGATATACAACGGTTAACACAGAGATaGTCCAAACACTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: EREKCICYVDIWASLDIQRLTQR*SKHLSL
Trigger: TAATGACAAGTGTTTGGACAATCTCTGTGTTAACCG...TTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCTCTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS-3UTR CAA 90 bp GGAGAGGGCTCACCAGCAATATTGTACATAGACTGGGTCAGAAACAGATATAATCATACCCAAAACTCCTaGACTAGAACTATCTCCTTT +
Preference number: 5 (lower is better)
Translates to: GEGSPAILYIDWVRNRYNHTQNS*TRTISF
Trigger: AAAGGAGATAGTTCTAGTCAAGGAGTTTTGGGTATG...ATTATATCTGTTTCTGACCCAGTCTATGTACAATATTGCTGGTGAGCCCTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp TACCCTAATTTAGTTTCTCCACACGGTGGAGGCTTTAACACTCTGTGCTTCTCAAACAAGCTGTTGCTTTaGCTAATTAGTCACCAATTC +
Preference number: 5 (lower is better)
Translates to: YPNLVSPHGGGFNTLCFSNKLLL*LISHQF
Trigger: GAATTGGTGACTAATTAGCAAAAGCAACAGCTTGTT...TGAGAAGCACAGAGTGTTAAAGCCTCCACCGTGTGGAGAAACTAAATTAGGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS CCA 90 bp AGCATATCACTGGCTGTTGGTTTCACCTCTGATCGGAACTTGTTATaGATTCGAACGCAGTCTTTGATGAAATCTTCATTTTCGATATCT +
Preference number: 5 (lower is better)
Translates to: SISLAVGFTSDRNLL*IRTQSLMKSSFSIS
Trigger: AGATATCGAAAATGAAGATTTCATCAAAGACTGCGTTCGAATCCATAACAAGTTCCGATCAGAGGTGAAACCAACAGCCAGTGATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS-3UTR CAA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGTTTTGGTGGTGGTGGTaGTTCATAGAAGAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQFWWWW*FIEECS
Trigger: AGAACACTCTTCTATGAACAACCACCACCACCAAAA...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp ACATGGATTTCTCATCACCTTAGACTAAAGGATGCTGACAGGTCTTATTCAGGACTACTTTGTCTGCCATaGAAGCTTCTTCAAATTTTC +
Preference number: 5 (lower is better)
Translates to: TWISHHLRLKDADRSYSGLLCLP*KLLQIF
Trigger: GAAAATTTGAAGAAGCTTCAATGGCAGACAAAGTAG...TCCTGAATAAGACCTGTCAGCATCCTTTAGTCTAAGGTGATGAGAAATCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp ACCTCCACACTTTTGTGTATGTATTCCCCTCAGCTTAGACTCTGTTTCCTTTATTCTTCTATGTGTTCTTaGAATTCCATCTTCACCTGT +
Preference number: 5 (lower is better)
Translates to: TSTLLCMYSPQLRLCFLYSSMCS*NSIFTC
Trigger: ACAGGTGAAGATGGAATTCAAAGAACACATAGAAGA...ATAAAGGAAACAGAGTCTAAGCTGAGGGGAATACATACACAAAAGTGTGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp GGAGTTACTAAGAATCACCTAAAAATGTGCTACTGTACCTTGCTCATTTTGCAGGATCAGTCTAAAAACTaGACTTCTTCCTTGCAACGT +
Preference number: 5 (lower is better)
Translates to: GVTKNHLKMCYCTLLILQDQSKN*TSSLQR
Trigger: ACGTTGCAAGGAAGAAGTCAAGTTTTTAGACTGATC...CTGCAAAATGAGCAAGGTACAGTAGCACATTTTTAGGTGATTCTTAGTAACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTAACTTTAGGGCAAAATaGAACTGCGCAGCCAACTTT +
Preference number: 5 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCNFRAK*NCAANF
Trigger: AAAGTTGGCTGCGCAGTTCAATTTTGCCCTAAAGTT...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS-3UTR CAA 90 bp CTGCCTTATTTCTTATGGCCCTTTCTTGTAGTAATTGACTTATCTTTCTTCTGTACTAAATTAGGGTACTaGTGCTGTACCAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: LPYFLWPFLVVIDLSFFCTKLGY*CCTKMV
Trigger: TACCATTTTGGTACAGCACAAGTACCCTAATTTAGT...ACAGAAGAAAGATAAGTCAATTACTACAAGAAAGGGCCATAAGAAATAAGGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS TCA 72 bp CCTTGGGAGGCTGCAGTCCAGAGCCGCCGCAGTTTCTaGGAGTGTGATTGCCTGAGTGCTCAGCCCACAGCT +
Preference number: 6 (lower is better)
Translates to: PWEAAVQSRRSF*ECDCLSAQPTA
Trigger: AGCTGTGGGCTGAGCACTCAGGCAATCACACTCTCAGAAACTGCGGCGGCTCTGGACTGCAGCCTCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS TCA 72 bp GGCTGCAGTCCAGAGCCGCCGCAGTTTCTGAGAGTGTaGTTGCCTGAGTGCTCAGCCCACAGCTTTGCAAAC +
Preference number: 6 (lower is better)
Translates to: GCSPEPPQFLRV*LPECSAHSFAN
Trigger: GTTTGCAAAGCTGTGGGCTGAGCACTCAGGCAATCACACTCTCAGAAACTGCGGCGGCTCTGGACTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS TCA 72 bp GCACAGACCCAGTCCAGATGTTCTCTCCCAGTGAAGTaGAGTTTGGGTGCAGCTTGTGGGGTGGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: AQTQSRCSLPVK*SLGAACGVASA
Trigger: GGCTGAAGCCACCCCACAAGCTGCACCCAAACTTCACTTCACTGGGAGAGAACATCTGGACTGGGTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
ENST00000550491.1
CDS CAA 90 bp AAAAGAAACCATCCAGGCTATTGTAGCAAGTGTGACACGCATGCTTaGTCTGGCATGGAGCCTTGGGAGGCTGCAGTCCAGAGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: KRNHPGYCSKCDTHA*SGMEPWEAAVQSRR
Trigger: GCGGCGGCTCTGGACTGCAGCCTCCCAAGGCTCCATGCCAGACAAAGCATGCGTGTCACACTTGCTACAATAGCCTGGATGGTTTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS CAA 72 bp CATCCAGGCTATTGTAGCAAGTGTGACACGCATGCTTaGTCTGGCATGGAGCCTTGGGAGGCTGCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: HPGYCSKCDTHA*SGMEPWEAAVQ
Trigger: CTGGACTGCAGCCTCCCAAGGCTCCATGCCAGACAAAGCATGCGTGTCACACTTGCTACAATAGCCTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266659.8
ENST00000536703.5
CDS CCA 72 bp CTGGATTTTCTCGCGCGAGATTCAAGAACCCTCTCTTaGGGTTTGGATCCCGACCCCTTTCCTGTGACACCT +
Preference number: 6 (lower is better)
Translates to: LDFLARDSRTLS*GLDPDPFPVTP
Trigger: AGGTGTCACAGGAAAGGGGTCGGGATCCAAACCCCAAGAGAGGGTTCTTGAATCTCGCGCGAGAAAATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456650.7
CDS CCA 72 bp GGCACTGCAGGTGGCTCCTCTCTTATATGGCCAAGTTaGGTAATTCCCTCTGAGTGTAGTGGCCACAGACTT +
Preference number: 6 (lower is better)
Translates to: GTAGGSSLIWPS*VIPSECSGHRL
Trigger: AAGTCTGTGGCCACTACACTCAGAGGGAATTACCCAACTTGGCCATATAAGAGAGGAGCCACCTGCAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536703.5
CDS TCA 72 bp GTGCAGCTTGTGGGGTGGCTTCAGCCGTGTATTATGTaGAAACTGGCAATTGCTGGCCCATGCTTTTGCAAT +
Preference number: 6 (lower is better)
Translates to: VQLVGWLQPCIM*KLAIAGPCFCN
Trigger: ATTGCAAAAGCATGGGCCAGCAATTGCCAGTTTTCACATAATACACGGCTGAAGCCACCCCACAAGCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
ENST00000550491.1
CDS GCA 72 bp GATTGTCCAAACACTTGTCATTATTGGGGCAGGCACTaGAGGTGGCTCCTCTCTTATATGGCCAAGTTGGGT +
Preference number: 6 (lower is better)
Translates to: DCPNTCHYWGRH*RWLLSYMAKLG
Trigger: ACCCAACTTGGCCATATAAGAGAGGAGCCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTTGGACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
ENST00000550491.1
CDS CCA 72 bp TTCTCTCCCAGTGAAGTGAAGTTTGGGTGCAGCTTGTaGGGTGGCTTCAGCCGTGTATTATGTGAAAACTGG +
Preference number: 6 (lower is better)
Translates to: FSPSEVKFGCSL*GGFSRVLCENW
Trigger: CCAGTTTTCACATAATACACGGCTGAAGCCACCCCACAAGCTGCACCCAAACTTCACTTCACTGGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
ENST00000550491.1
CDS CCA 72 bp GGCACTGCAGGTGGCTCCTCTCTTATATGGCCAAGTTaGGTAATTCCCTCCTGGTCCGTAGTTGCATATAAA +
Preference number: 6 (lower is better)
Translates to: GTAGGSSLIWPS*VIPSWSVVAYK
Trigger: TTTATATGCAACTACGGACCAGGAGGGAATTACCCAACTTGGCCATATAAGAGAGGAGCCACCTGCAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000550491.1
CDS CCA 72 bp CCAAACACTTGTCATTATTGGGGCAGGCACTGCAGGTaGCTCCTCTCTTATATGGCCAAGTTGGGTAATTCC +
Preference number: 6 (lower is better)
Translates to: PNTCHYWGRHCR*LLSYMAKLGNS
Trigger: GGAATTACCCAACTTGGCCATATAAGAGAGGAGCCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
ENST00000550491.1
CDS CAA 90 bp GGGCTAGTGCTGGGTCCCAAGTCATGTATAGCATATCACTGGCTGTaGGTTTCACCTCTGATCGGAACTTGTTATGGATTCGAACGCAGT +
Preference number: 6 (lower is better)
Translates to: GLVLGPKSCIAYHWL*VSPLIGTCYGFERS
Trigger: ACTGCGTTCGAATCCATAACAAGTTCCGATCAGAGGTGAAACCAACAGCCAGTGATATGCTATACATGACTTGGGACCCAGCACTAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CAA 90 bp TCTCGCTGTCGGTTAACACAGAGATTGTCCAAACACTTGTCATTATaGGGGCAGGCACTGCAGGTGGCTCCTCTCTTATATGGCCAAGTT +
Preference number: 6 (lower is better)
Translates to: SRCRLTQRLSKHLSL*GQALQVAPLLYGQV
Trigger: AACTTGGCCATATAAGAGAGGAGCCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCGACAGCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CCA 72 bp CGCAGCCAACTTTGTAACTATCTGCCCAAACAACCCTaGATTTTCTCGCGCGAGATTCAAGAACCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: RSQLCNYLPKQP*IFSREIQEPSL
Trigger: AAGAGAGGGTTCTTGAATCTCGCGCGAGAAAATCCAGGGTTGTTTGGGCAGATAGTTACAAAGTTGGCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456650.7
CDS CAA 72 bp GGTGGCTTCAGCCGTGTATTATGTGAAAACTGGCAATaGCTGGCCCATGCTTTTGCAATTTGGGCTAGTGCT +
Preference number: 6 (lower is better)
Translates to: GGFSRVLCENWQ*LAHAFAIWASA
Trigger: AGCACTAGCCCAAATTGCAAAAGCATGGGCCAGCAATTGCCAGTTTTCACATAATACACGGCTGAAGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
ENST00000550491.1
CDS CAA 72 bp ATGTTCTCTCCCAGTGAAGTGAAGTTTGGGTGCAGCTaGTGGGGTGGCTTCAGCCGTGTATTATGTGAAAAC +
Preference number: 6 (lower is better)
Translates to: MFSPSEVKFGCS*WGGFSRVLCEN
Trigger: GTTTTCACATAATACACGGCTGAAGCCACCCCACAAGCTGCACCCAAACTTCACTTCACTGGGAGAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
ENST00000550491.1
CDS GCA 72 bp GCAAAATTGAACTGCGCAGCCAACTTTGTAACTATCTaGCCAAACAACCCTGGATTTTCTCGCGCGAGATTC +
Preference number: 6 (lower is better)
Translates to: AKLNCAANFVTI*PNNPGFSRARF
Trigger: GAATCTCGCGCGAGAAAATCCAGGGTTGTTTGGGCAGATAGTTACAAAGTTGGCTGCGCAGTTCAATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456650.7
CDS CCA 72 bp GAAAACTGGCAATTGCTGGCCCATGCTTTTGCAATTTaGGCTAGTGCTGGGTCCCAAGTCATGTATAGCATA +
Preference number: 6 (lower is better)
Translates to: ENWQLLAHAFAI*ASAGSQVMYSI
Trigger: TATGCTATACATGACTTGGGACCCAGCACTAGCCCAAATTGCAAAAGCATGGGCCAGCAATTGCCAGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CAA 72 bp CGGTTAACACAGAGATTGTCCAAACACTTGTCATTATaGGGGCAGGCACTGCAGGTGGCTCCTCTCTTATAT +
Preference number: 6 (lower is better)
Translates to: RLTQRLSKHLSL*GQALQVAPLLY
Trigger: ATATAAGAGAGGAGCCACCTGCAGTGCCTGCCCCAATAATGACAAGTGTTTGGACAATCTCTGTGTTAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CAA 90 bp TCAGCCGTGTATTATGTGAAAACTGGCAATTGCTGGCCCATGCTTTaGCAATTTGGGCTAGTGCTGGGTCCCAAGTCATGTATAGCATAT +
Preference number: 6 (lower is better)
Translates to: SAVYYVKTGNCWPML*QFGLVLGPKSCIAY
Trigger: ATATGCTATACATGACTTGGGACCCAGCACTAGCCCAAATTGCAAAAGCATGGGCCAGCAATTGCCAGTTTTCACATAATACACGGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CCA 72 bp CTAGTGCTGGGTCCCAAGTCATGTATAGCATATCACTaGCTGTTGGTTTCACCTCTGATCGGAACTTGTTAT +
Preference number: 6 (lower is better)
Translates to: LVLGPKSCIAYH*LLVSPLIGTCY
Trigger: ATAACAAGTTCCGATCAGAGGTGAAACCAACAGCCAGTGATATGCTATACATGACTTGGGACCCAGCACTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CAA 72 bp CTGGGTCCCAAGTCATGTATAGCATATCACTGGCTGTaGGTTTCACCTCTGATCGGAACTTGTTATGGATTC +
Preference number: 6 (lower is better)
Translates to: LGPKSCIAYHWL*VSPLIGTCYGF
Trigger: GAATCCATAACAAGTTCCGATCAGAGGTGAAACCAACAGCCAGTGATATGCTATACATGACTTGGGACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS GCA 72 bp AGCGTCAAAGCCAGAAACTTTAGGGCAAAATTGAACTaGGCAGCCAACTTTGTAACTATCTGCCCAAACAAC +
Preference number: 6 (lower is better)
Translates to: SVKARNFRAKLN*AANFVTICPNN
Trigger: GTTGTTTGGGCAGATAGTTACAAAGTTGGCTGCGCAGTTCAATTTTGCCCTAAAGTTTCTGGCTTTGACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000550491.1
CDS GCA 72 bp GTAATTCCCTCCTGGTCCGTAGTTGCATATAAAATGTaGTCCATTGGAAAGAGCGTCAAAGCCAGAAACTTT +
Preference number: 6 (lower is better)
Translates to: VIPSWSVVAYKM*SIGKSVKARNF
Trigger: AAAGTTTCTGGCTTTGACGCTCTTTCCAATGGAGCACATTTTATATGCAACTACGGACCAGGAGGGAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000550491.1
CDS CCA 72 bp AGAAGTGTATCTGTTACGTGGATATATGGGCCAGCCTaGATATACAACAGAGTAGTAACGTTTGACTTGGTC +
Preference number: 6 (lower is better)
Translates to: RSVSVTWIYGPA*IYNRVVTFDLV
Trigger: GACCAAGTCAAACGTTACTACTCTGTTGTATATCCAGGCTGGCCCATATATCCACGTAACAGATACACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266659.8
CDS CCA 72 bp CTGGCTGTTGGTTTCACCTCTGATCGGAACTTGTTATaGATTCGAACGCAGTCTTTGATGAAATCTTCATTT +
Preference number: 6 (lower is better)
Translates to: LAVGFTSDRNLL*IRTQSLMKSSF
Trigger: AAATGAAGATTTCATCAAAGACTGCGTTCGAATCCATAACAAGTTCCGATCAGAGGTGAAACCAACAGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CAA 72 bp ATATCACTGGCTGTTGGTTTCACCTCTGATCGGAACTaGTTATGGATTCGAACGCAGTCTTTGATGAAATCT +
Preference number: 6 (lower is better)
Translates to: ISLAVGFTSDRN*LWIRTQSLMKS
Trigger: AGATTTCATCAAAGACTGCGTTCGAATCCATAACAAGTTCCGATCAGAGGTGAAACCAACAGCCAGTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CAA 90 bp ATGTATAGCATATCACTGGCTGTTGGTTTCACCTCTGATCGGAACTaGTTATGGATTCGAACGCAGTCTTTGATGAAATCTTCATTTTCG +
Preference number: 6 (lower is better)
Translates to: MYSISLAVGFTSDRN*LWIRTQSLMKSSFS
Trigger: CGAAAATGAAGATTTCATCAAAGACTGCGTTCGAATCCATAACAAGTTCCGATCAGAGGTGAAACCAACAGCCAGTGATATGCTATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CAA 90 bp GGTTTCACCTCTGATCGGAACTTGTTATGGATTCGAACGCAGTCTTaGATGAAATCTTCATTTTCGATATCTGGCAAAATATTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: GFTSDRNLLWIRTQS*MKSSFSISGKIFAV
Trigger: CACAGCAAATATTTTGCCAGATATCGAAAATGAAGATTTCATCAAAGACTGCGTTCGAATCCATAACAAGTTCCGATCAGAGGTGAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5
CDS CAA 72 bp TCTGATCGGAACTTGTTATGGATTCGAACGCAGTCTTaGATGAAATCTTCATTTTCGATATCTGGCAAAATA +
Preference number: 6 (lower is better)
Translates to: SDRNLLWIRTQS*MKSSFSISGKI
Trigger: TATTTTGCCAGATATCGAAAATGAAGATTTCATCAAAGACTGCGTTCGAATCCATAACAAGTTCCGATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266659.8
ENST00000456650.7
ENST00000536703.5