Pregenerated sensors for GLIDR (Homo sapiens)
Ensembl gene IDs: ENSG00000278175Ensembl transcript IDs: ENST00000618092.2, ENST00000625350.1, ENST00000627065.2, ENST00000638724.1, ENST00000657066.1, ENST00000660231.1, ENST00000663590.1, ENST00000665892.1, ENST00000666618.1, ENST00000666906.1, ENST00000667968.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTCTGGTGGCCATTTCACCTTTATCATTTCTTTGTGTTGGTAACATaGAAAATCCTCTCTCCCAGGTATCTGCGCACGCGTCGCAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: VWWPFHLYHFFVLVT*KILSPRYLRTRRSH Trigger: ATGGCTGCGACGCGTGCGCAGATACCTGGGAGAGAGGATTTTTCATGTTACCAACACAAAGAAATGATAAAGGTGAAATGGCCACCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666618.1 |
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| CDS GCA 90 bp | GGTGGTTTGCTGGCAATCTTTGGCATCCCTGGGCTTGTAGAATTCTaGCTTCATCTTCATATGGCATATCCCCTGTGTTATCTCTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: GGLLAIFGIPGLVEF*LHLHMAYPLCYLCA Trigger: TGCACAGAGATAACACAGGGGATATGCCATATGAAGATGAAGGCAGAATTCTACAAGCCCAGGGATGCCAAAGATTGCCAGCAAACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666906.1 ENST00000667968.1 |
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| CDS TCA 90 bp | GTCTGGTGGCCATTTCACCTTTATCATTTCTTTGTGTTGGTAACATaGAAAATCCTCTCTCCCAGGTATCGAGGAGGCGTCTCTTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: VWWPFHLYHFFVLVT*KILSPRYRGGVSSV Trigger: CACGGAAGAGACGCCTCCTCGATACCTGGGAGAGAGGATTTTTCATGTTACCAACACAAAGAAATGATAAAGGTGAAATGGCCACCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638724.1 |
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| CDS TCA 90 bp | TCACCTGCAAGGGAAGCACTTTATCATTTCTTTGTGTTGGTAACATaGAAAATCCTCTCTCCCAGGTATCGAGGAGGCGTCTCTTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: SPAREALYHFFVLVT*KILSPRYRGGVSSV Trigger: CACGGAAGAGACGCCTCCTCGATACCTGGGAGAGAGGATTTTTCATGTTACCAACACAAAGAAATGATAAAGTGCTTCCCTTGCAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657066.1 ENST00000663590.1 |
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| CDS TCA 90 bp | ATGCCCATGACCTCAAACCTTTATCATTTCTTTGTGTTGGTAACATaGAAAATCCTCTCTCCCAGGTATCGAGGAGGCGTCTCTTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: MPMTSNLYHFFVLVT*KILSPRYRGGVSSV Trigger: CACGGAAGAGACGCCTCCTCGATACCTGGGAGAGAGGATTTTTCATGTTACCAACACAAAGAAATGATAAAGGTTTGAGGTCATGGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665892.1 |
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| CDS TCA 90 bp | GAATTTCTAGACCTCCATAGCATGCAAAGCTCTAGAACAGTTCTTTaGACACAGAAGGTGCTTGACAAATATTTTCTGAAAGAAAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: EFLDLHSMQSSRTVL*TQKVLDKYFLKEKE Trigger: TTCTTTTTCTTTCAGAAAATATTTGTCAAGCACCTTCTGTGTTCAAAGAACTGTTCTAGAGCTTTGCATGCTATGGAGGTCTAGAAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000618092.2 ENST00000625350.1 ENST00000627065.2 ENST00000660231.1 |
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| CDS CCA 72 bp | CAAGTGCCAGAGCCACGACTCAGATCTACACAGGTCTaGCTCCAGAGCCCCCAATCTAACCTCTTAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: QVPEPRLRSTQV*LQSPQSNLLTS Trigger: AGAGGTTAAGAGGTTAGATTGGGGGCTCTGGAGCCAGACCTGTGTAGATCTGAGTCGTGGCTCTGGCACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000618092.2 ENST00000625350.1 ENST00000627065.2 ENST00000660231.1 |
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| CDS GCA 72 bp | ACTAAGTATCTTAACCAAGGTCACACGGCTTTCAAGTaGCAGAGCCACGACTCAGATCTACACAGGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: TKYLNQGHTAFK*QSHDSDLHRSG Trigger: GCCAGACCTGTGTAGATCTGAGTCGTGGCTCTGGCACTTGAAAGCCGTGTGACCTTGGTTAAGATACTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000618092.2 ENST00000625350.1 ENST00000627065.2 ENST00000660231.1 |
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| CDS GCA 72 bp | TCATCTTCATATGGCATATCCCCTGTGTTATCTCTGTaGACAAATTTCCCGAGGAGGCGTCTCTTCCGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSSYGISPVLSL*TNFPRRRLFRA Trigger: TGCACGGAAGAGACGCCTCCTCGGGAAATTTGTGCACAGAGATAACACAGGGGATATGCCATATGAAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666906.1 ENST00000667968.1 |
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| CDS CCA 72 bp | AGCTTCTGGTGGTTTGCTGGCAATCTTTGGCATCCCTaGGCTTGTAGAATTCTGCCTTCATCTTCATATGGC | + |
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Preference number: 6 (lower is better) Translates to: SFWWFAGNLWHP*ACRILPSSSYG Trigger: GCCATATGAAGATGAAGGCAGAATTCTACAAGCCCAGGGATGCCAAAGATTGCCAGCAAACCACCAGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666906.1 ENST00000667968.1 |
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| CDS CAA 90 bp | GTGAGGAAGAATCTAATCCACACTTCTCTCCTAGCTTCTGGTGGTTaGCTGGCAATCTTTGGCATCCCTGGGCTTGTAGAATTCTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: VRKNLIHTSLLASGG*LAIFGIPGLVEFCL Trigger: AAGGCAGAATTCTACAAGCCCAGGGATGCCAAAGATTGCCAGCAAACCACCAGAAGCTAGGAGAGAAGTGTGGATTAGATTCTTCCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666906.1 ENST00000667968.1 |
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| CDS CCA 72 bp | ACTACCCTATGGGGTAGGTGCCCTTATTTCTCCATTTaGCAGAGAGGGACTAAGTATCTTAACCAAGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: TTLWGRCPYFSI*QRGTKYLNQGH Trigger: GTGACCTTGGTTAAGATACTTAGTCCCTCTCTGCCAAATGGAGAAATAAGGGCACCTACCCCATAGGGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000618092.2 ENST00000625350.1 ENST00000627065.2 ENST00000660231.1 |
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| CDS GCA 72 bp | CTGGCAATCTTTGGCATCCCTGGGCTTGTAGAATTCTaGCTTCATCTTCATATGGCATATCCCCTGTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: LAIFGIPGLVEF*LHLHMAYPLCY Trigger: ATAACACAGGGGATATGCCATATGAAGATGAAGGCAGAATTCTACAAGCCCAGGGATGCCAAAGATTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666906.1 ENST00000667968.1 |
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| CDS TCA 72 bp | CCATTTCACCTTTATCATTTCTTTGTGTTGGTAACATaGAAAATCCTCTCTCCCAGGTATCGAGGAGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: PFHLYHFFVLVT*KILSPRYRGGV Trigger: GACGCCTCCTCGATACCTGGGAGAGAGGATTTTTCATGTTACCAACACAAAGAAATGATAAAGGTGAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638724.1 |
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| CDS TCA 72 bp | ACCTCAAACCTTTATCATTTCTTTGTGTTGGTAACATaGAAAATCCTCTCTCCCAGGTATCGAGGAGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: TSNLYHFFVLVT*KILSPRYRGGV Trigger: GACGCCTCCTCGATACCTGGGAGAGAGGATTTTTCATGTTACCAACACAAAGAAATGATAAAGGTTTGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665892.1 |
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| CDS TCA 72 bp | CCATTTCACCTTTATCATTTCTTTGTGTTGGTAACATaGAAAATCCTCTCTCCCAGGTATCTGCGCACGCGT | + |
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Preference number: 6 (lower is better) Translates to: PFHLYHFFVLVT*KILSPRYLRTR Trigger: ACGCGTGCGCAGATACCTGGGAGAGAGGATTTTTCATGTTACCAACACAAAGAAATGATAAAGGTGAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666618.1 |
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