RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLI4 (Homo sapiens)

Ensembl gene IDs: ENSG00000250571

Ensembl transcript IDs: ENST00000340042.2, ENST00000344692.7, ENST00000517468.5, ENST00000517530.5, ENST00000519876.1, ENST00000520021.5, ENST00000521682.5, ENST00000522033.1, ENST00000522479.1, ENST00000523522.5, ENST00000523812.1

Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTaGCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCCATG +
Preference number: 1 (lower is better)
Translates to: PCRGCGPYGHSSSWG*PRPRWQVCCRPAPM
Trigger: CATGGGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
3UTR GCA 90 bp GGAGCCTGGGGGACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTTaGCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGC +
Preference number: 1 (lower is better)
Translates to: GAWGTPELQRAPQSP*RGCGPYGHSSSWGC
Trigger: GCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTCCCCCAGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
3UTR GCA 90 bp GTGACCCAGAGCTGCTGGGACCATCCACAGTCACCACGGCGGCCGTaGCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTCAC +
Preference number: 1 (lower is better)
Translates to: VTQSCWDHPQSPRRP*RCTEPQWQDRPWGH
Trigger: GTGACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGTGGATGGTCCCAGCAGCTCTGGGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
3UTR CCA 90 bp GACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTTGCCGAGGATGTaGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCG +
Preference number: 1 (lower is better)
Translates to: DARAPEGASKPLPRM*SIWAQLLMGLPQAS
Trigger: CGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
3UTR CCA 90 bp CAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATaGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCT +
Preference number: 1 (lower is better)
Translates to: QSPCRGCGPYGHSSS*GCPRPRWQVCCRPA
Trigger: AGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
3UTR CCA 90 bp GCTCCAGAGGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATaGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGT +
Preference number: 1 (lower is better)
Translates to: APEGASKPLPRMWSI*AQLLMGLPQASVAS
Trigger: ACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTCTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
3UTR CCA 90 bp ACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAACCCTaGGAGCTTCTCAAGGGGGAGGTGCAGGGGACCTGGACACAGCTC +
Preference number: 1 (lower is better)
Translates to: TVKSSHITNIAQREP*ELLKGEVQGTWTQL
Trigger: GAGCTGTGTCCAGGTCCCCTGCACCTCCCCCTTGAGAAGCTCCCAGGGTTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR CCA 90 bp GGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCGGCCACTGGCGCAGGTaGCTGTGGGCTGCAGTCACC +
Preference number: 2 (lower is better)
Translates to: GTAPHGAAPGLGGKCAAAGHWRR*LWAAVT
Trigger: GGTGACTGCAGCCCACAGCCACCTGCGCCAGTGGCC...GGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR TCA 90 bp CACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGGGACAGTGGTGCCCTaGGCCAGAAGCCCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: HHGGRAGARSHSGKTDHGGTVVP*ARSPSP
Trigger: TGGGCTGGGGCTTCTGGCTCAGGGCACCACTGTCCC...CCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517468.5
3UTR-3UTR CCA 90 bp AGGACCCGGAGCCTGGGGGACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTTGTCCACGTGGGGCCACTaGCGCAGGTGGCTGTGGGCT +
Preference number: 2 (lower is better)
Translates to: RTRSLGDARAPEGASKPLSTWGH*RRWLWA
Trigger: AGCCCACAGCCACCTGCGCCAGTGGCCCCACGTGGA...CAAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTCCCCCAGGCTCCGGGTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517468.5
3UTR-3UTR GCA 90 bp CGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGCGGCGGCCGTGCCGGTaGACGGAGCCACAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: RGCGPYGHSSSWGCPRPRRRPCR*TEPQWQ
Trigger: TTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCG...CCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
3UTR-3UTR TCA 90 bp GCTGGGACCATCCACAGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTAGCACTAAGTGTTGGTaGGGACCCGGAGCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: AGTIHSHHGGRAGARSHSSTKCW*GPGAWG
Trigger: CCCCCAGGCTCCGGGTCCTCACCAACACTTAGTGCT...ACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGTGGATGGTCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
3UTR-3UTR CCA 90 bp ACAGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCAGGGCCGCCCAGATGTaGGCGAGGGCTCAGCACTGT +
Preference number: 2 (lower is better)
Translates to: TVTTAAVPVHGATVARQTRAAQM*ARAQHC
Trigger: ACAGTGCTGAGCCCTCGCCCACATCTGGGCGGCCCT...GGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
3UTR CAA 90 bp CGGAGCCTGGGGGACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTaGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: RSLGDARAPEGASKP*PRMWSIWAQLLMGL
Trigger: CAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTCCCCCAGGCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
3UTR-3UTR TCA 90 bp TCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCCGGAGGGAGGAGTTCCTaGTTCACTGTGTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SSWGCPRPRWQVCCRPAPGGRSS*FTVSSW
Trigger: CCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCC...GGGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR GCA 90 bp GAGGACCCGGAGCCTGGGGGACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTTTTCTCAAGGGGGAGGTaGAGGGGACCTGGACACAGC +
Preference number: 2 (lower is better)
Translates to: EDPEPGGRQSSRGRLKALFSRGR*RGPGHS
Trigger: GCTGTGTCCAGGTCCCCTGCACCTCCCCCTTGAGAA...AAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTCCCCCAGGCTCCGGGTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000517468.5
3UTR-3UTR CCA 90 bp GCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTCACCCTTAGCCAGGGCCACTGGCGCAGGTaGCTGTGGGCTGCAGTCACC +
Preference number: 2 (lower is better)
Translates to: AGARSHSGKTDHGVTLSQGHWRR*LWAAVT
Trigger: GGTGACTGCAGCCCACAGCCACCTGCGCCAGTGGCC...CTGGCTAAGGGTGACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517468.5
3UTR-3UTR TCA 90 bp CACCCCAGGAGCTTCCCACGCAAATCTCTGGCCCAGGGTCTCTTTCCAGGGACCGGGACAGTGGTGCCCTaGGCCAGAAGCCCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: HPRSFPRKSLAQGLFPGTGTVVP*ARSPSP
Trigger: TGGGCTGGGGCTTCTGGCTCAGGGCACCACTGTCCC...GGTCCCTGGAAAGAGACCCTGGGCCAGAGATTTGCGTGGGAAGCTCCTGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR GCA 90 bp TGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAACAGGTGGCTGTGGGCTaGAGTCACCGCCTCGGGAAG +
Preference number: 2 (lower is better)
Translates to: CGPYGHSSSWGCPRPRWQQVAVG*SHRLGK
Trigger: CTTCCCGAGGCGGTGACTGCAGCCCACAGCCACCTG...TTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR CCA 90 bp GAGGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCTCCACGTGGGGCCACTaGCGCAGGTGGCTGTGGGCT +
Preference number: 2 (lower is better)
Translates to: EGASKPLPRMWSIWAQLLSTWGH*RRWLWA
Trigger: AGCCCACAGCCACCTGCGCCAGTGGCCCCACGTGGA...GAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR CCA 90 bp GCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTCACCCTTAGCCAGTTCACTGTGTCCAGCTaGGGCCGGCAGGAGTCCACG +
Preference number: 2 (lower is better)
Translates to: AGARSHSGKTDHGVTLSQFTVSS*GRQEST
Trigger: CGTGGACTCCTGCCGGCCCCAGCTGGACACAGTGAA...CTGGCTAAGGGTGACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517468.5
3UTR-3UTR CCA 90 bp GGGCGTTGCAGGGTGACCCAGAGCTGCTGGGACCATCCACAGTCACCACGGCGGTGCACGGAGCCACAGTaGCAAGACAGACCATGGGGT +
Preference number: 2 (lower is better)
Translates to: GRCRVTQSCWDHPQSPRRCTEPQ*QDRPWG
Trigger: ACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCA...CCGCCGTGGTGACTGTGGATGGTCCCAGCAGCTCTGGGTCACCCTGCAACGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
3UTR-3UTR GCA 90 bp GGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCCAGCATTGGGGGTaGCACAGAGGTGGGCATTGT +
Preference number: 2 (lower is better)
Translates to: GPYGHSSSWGCPRPRWQVCQHWG*HRGGHC
Trigger: ACAATGCCCACCTCTGTGGCACCCCCAATGCTGGCA...CACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344692.7
3UTR-3UTR CCA 90 bp TGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGCACGCGCAGAGCTCTaGTCCCCCAGTAACCCGATT +
Preference number: 2 (lower is better)
Translates to: WSIWAQLLMGLPQASVASARAEL*SPSNPI
Trigger: AATCGGGTTACTGGGGGACCAGAGCTCTGCGCGTGC...ACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344692.7
3UTR-3UTR CCA 90 bp GGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCGGAAGCATCAGTAACTaGACTGGCATTAGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: GTAPHGAAPGLGGKCAAAGSISN*TGIRVG
Trigger: CCCCACTCTAATGCCAGTCCAGTTACTGATGCTTCC...GGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344692.7
3UTR-3UTR TCA 90 bp GAGGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCGGAGGGAGGAGTTCCTaGTTCACTGTGTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: EGASKPLPRMWSIWAQLLGGRSS*FTVSSW
Trigger: CCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCC...GAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR GCA 90 bp GGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATTTCTCAAGGGGGAGGTaGAGGGGACCTGGACACAGC +
Preference number: 2 (lower is better)
Translates to: GRLKALAEDVVHMGTAPHFSRGR*RGPGHS
Trigger: GCTGTGTCCAGGTCCCCTGCACCTCCCCCTTGAGAA...ATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR CCA 90 bp TGTGGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGCGGCAGGAGTCCACGTaGGGCCACTGGCGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: CGRGLSTVKSSHITNIAQRQEST*GHWRRW
Trigger: CCACCTGCGCCAGTGGCCCCACGTGGACTCCTGCCG...CTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR CCA 90 bp AAGACAGACCATGGGGTCACCCTTAGCCAGGAGGAAGCACTAAGTGTTGGTGAGCGGCAGGAGTCCACGTaGGGCCACTGGCGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: KTDHGVTLSQEEALSVGERQEST*GHWRRW
Trigger: CCACCTGCGCCAGTGGCCCCACGTGGACTCCTGCCG...CTCACCAACACTTAGTGCTTCCTCCTGGCTAAGGGTGACCCCATGGTCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517468.5
3UTR-3UTR CCA 90 bp CGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAATGGCGCAGGTGGCTGTaGGCTGCAGTCACCGCCTCG +
Preference number: 2 (lower is better)
Translates to: RGLSTVKSSHITNIAQREWRRWL*AAVTAS
Trigger: CGAGGCGGTGACTGCAGCCCACAGCCACCTGCGCCA...TTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR GCA 90 bp CCAGATGTGGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCAGGAAGGGGGTGGTaGCAGCATTGGGGGTGCCAC +
Preference number: 2 (lower is better)
Translates to: PDVGEGSALLNPAISLTSPGRGW*QHWGCH
Trigger: GTGGCACCCCCAATGCTGGCACCACCCCCTTCCTGG...CGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCCACATCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344692.7
3UTR-3UTR CCA 90 bp GGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGATAACTCGTGGATCTaGGGGGACAGTGGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: GRGLSTVKSSHITNIAQRDNSWI*GDSGAL
Trigger: CAGGGCACCACTGTCCCCCCAGATCCACGAGTTATC...CCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR-3UTR CCA 90 bp CGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAAGATAACTCGTGGATCTaGGGGGACAGTGGTGCCCTG +
Preference number: 2 (lower is better)
Translates to: RGLSTVKSSHITNIAQREDNSWI*GDSGAL
Trigger: CAGGGCACCACTGTCCCCCCAGATCCACGAGTTATC...TTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
3UTR GCA 72 bp ATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTaGCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGG +
Preference number: 3 (lower is better)
Translates to: IYSGHVACGAGQ*PPWGTGWRVGW
Trigger: CCAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
3UTR GCA 72 bp GGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTaGCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCA +
Preference number: 3 (lower is better)
Translates to: GCGPYGHSSSWG*PRPRWQVCCRP
Trigger: TGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
3UTR GCA 72 bp TGGGACCATCCACAGTCACCACGGCGGCCGTGCCGGTaGACGGAGCCACAGTGGCAAGACAGACCATGGGGT +
Preference number: 3 (lower is better)
Translates to: WDHPQSPRRPCR*TEPQWQDRPWG
Trigger: ACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGTGGATGGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
3UTR GCA 72 bp AGCTGCTGGGACCATCCACAGTCACCACGGCGGCCGTaGCGGTGCACGGAGCCACAGTGGCAAGACAGACCA +
Preference number: 3 (lower is better)
Translates to: SCWDHPQSPRRP*RCTEPQWQDRP
Trigger: TGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGTGGATGGTCCCAGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
3UTR-3UTR CAA 90 bp GAGGGAGGAGTTCCTGATTCACTGTGTCCAGCTGGGGCCGGCAGGAGTCCACGTGGGGTGGTGCCAGCATaGGGGGTGCCACAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: EGGVPDSLCPAGAGRSPRGVVPA*GVPQRW
Trigger: CCACCTCTGTGGCACCCCCAATGCTGGCACCACCCC...ACGTGGACTCCTGCCGGCCCCAGCTGGACACAGTGAATCAGGAACTCCTCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344692.7
3UTR CCA 72 bp TGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATaGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGC +
Preference number: 3 (lower is better)
Translates to: CRGCGPYGHSSS*GCPRPRWQVCC
Trigger: GCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
3UTR GCA 72 bp GGGACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTTaGCGAGGATGTGGTCCATATGGGCACAGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: GTPELQRAPQSP*RGCGPYGHSSS
Trigger: TGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
3UTR CCA 72 bp TCCAGCCATATCACTAACATCGCCCAGAGGGAACCCTaGGAGCTTCTCAAGGGGGAGGTGCAGGGGACCTGG +
Preference number: 3 (lower is better)
Translates to: SSHITNIAQREP*ELLKGEVQGTW
Trigger: CCAGGTCCCCTGCACCTCCCCCTTGAGAAGCTCCCAGGGTTCCCTCTGGGCGATGTTAGTGATATGGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
CDS-3UTR GCA 90 bp CCCCCGCGCGCTGCCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCGGCCCGGCCGCTGCTTaGTGCACGAGCGTCACGCGC +
Preference number: 4 (lower is better)
Translates to: PPRAALPAPTEVDSQLGSGPAAA*CTSVTR
Trigger: GCGCGTGACGCTCGTGCAGCAAGCAGCGGCCGGGCC...GCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGGCAGCGCGCGGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR GCA 90 bp CGCGCGCTGCCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCCCCCGCGCGCTGCCCTaGCGGCTCCGACCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RALPCRLRPKLTPSSAARPRALP*RLRPKL
Trigger: CAACTTCGGTCGGAGCCGGCAGGGCAGCGCGCGGGG...GCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGGCAGCGCGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR GCA 90 bp TGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGGGGGCCCCGCGCGCTGCCCTaGCGGCTCCGACCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CGAGQCPPWGTGWRVGWGPRALP*RLRPKL
Trigger: CAACTTCGGTCGGAGCCGGCAGGGCAGCGCGCGGGG...CCCCCAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp CACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGCCCGGCCGCTGCTTaGTGCACGAGCGTCACGCGC +
Preference number: 4 (lower is better)
Translates to: HVACGAGQCPPWGTGWRVGPAAA*CTSVTR
Trigger: GCGCGTGACGCTCGTGCAGCAAGCAGCGGCCGGGCC...CACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGGCCCGGCCGCTGCTTaGTGCACGAGCGTCACGCGC +
Preference number: 4 (lower is better)
Translates to: GHVACGAGQCPPWGTGWRGPAAA*CTSVTR
Trigger: GCGCGTGACGCTCGTGCAGCAAGCAGCGGCCGGGCC...CCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGGCCCCGCGCGCTGCCCTaGCGGCTCCGACCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ACGAGQCPPWGTGWRVGWPRALP*RLRPKL
Trigger: CAACTTCGGTCGGAGCCGGCAGGGCAGCGCGCGGGG...CCAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp CCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGGCGCACCGGCCGCTCCGCGCTaGATTCAGGCCCGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: PCRLRPKLTPSSAARSGAPAAPR*IQARSR
Trigger: CCGGCTTCGGGCCTGAATCCAGCGCGGAGCGGCCGG...TGCGCCCGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR TCA 90 bp CGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGCCCTCGTCAGGGGCCTaGGAGCCAGGAGAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: RGMRCWAVPTVGDGVEGGPSSGA*EPGERG
Trigger: TCCACGCTCTCCTGGCTCTCAGGCCCCTGACGAGGG...CCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp CTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGGCGCACCCTCGGGCCCGGCCGCTaGTTGCTGCACGAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: LPAPTEVDSQLGSPLGRTLGPGR*LLHERH
Trigger: GTGACGCTCGTGCAGCAAGCAGCGGCCGGGCCCGAG...GGTGCGCCCGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR GCA 90 bp GGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGCTCGGGCCCGGCCGCTaGTTGCTGCACGAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: GMRCWAVPTVGDGVEGGLLGPGR*LLHERH
Trigger: GTGACGCTCGTGCAGCAAGCAGCGGCCGGGCCCGAG...CAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp CGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGGAGCCTGCTCCGGCTTaGGCTCGGAGTCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RGMRCWAVPTVGDGVEGGEPAPA*ARSRAR
Trigger: TCTGGCCCGACTCCGAGCCCAAGCCGGAGCAGGCTC...CCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp GGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGGGCTCCGACCGAAGTTaGCTCCCAGCTCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GMRCWAVPTVGDGVEGGLGSDRS*LPARQP
Trigger: GGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCC...CAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp CCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGGCGCAGGCTCCGACCGAAGTTaGCTCCCAGCTCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PCRLRPKLTPSSAARSGAGSDRS*LPARQP
Trigger: GGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCC...TGCGCCCGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR TCA 90 bp GCGCTGCCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGTGCGGTGGTGCTGGATaGAGCCCGACCAGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: ALPCRLRPKLTPSSAARSCGGAG*SPTSRG
Trigger: TCCGCGGCTGGTCGGGCTTCATCCAGCACCACCGCA...CGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGGCAGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR TCA 90 bp CACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGTGCGGTGGTGCTGGATaGAGCCCGACCAGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: HVACGAGQCPPWGTGWRVCGGAG*SPTSRG
Trigger: TCCGCGGCTGGTCGGGCTTCATCCAGCACCACCGCA...CACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp TTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGCTCGGGCCCGGCCGCTaGTTGCTGCACGAGCGTCAC +
Preference number: 4 (lower is better)
Translates to: FRTRGMRCWAVPTVGDGVLGPGR*LLHERH
Trigger: GTGACGCTCGTGCAGCAAGCAGCGGCCGGGCCCGAG...CACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp TGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGGGGGGTGTGGGTCCGCAGGTaGCGGAAGAAGTGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: CGAGQCPPWGTGWRVGWGVWVRR*RKKCER
Trigger: CCGCTCGCACTTCTTCCGGCACCTGCGGACCCACAC...CCCCCAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp TGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGGGGGACACGTGGCATGCGGTaGTGGGCAGTGCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: CGAGQCPPWGTGWRVGWGTRGMR*WAVPTV
Trigger: CACGGTGGGCACTGCCCAGCACCGCATGCCACGTGT...CCCCCAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCGGCGGCCGTGCCGGTaGACGGAGCCACAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GHSSSWGCPRPRWQVCCRRRPCR*TEPQWQ
Trigger: TTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCG...GCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp TGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCCATGCCCACCCCAGGGACAGTGGTGCCCTaGGCCAGAAGCCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: CPRPRWQVCCRPAPMPTPGTVVP*ARSPSP
Trigger: TGGGCTGGGGCTTCTGGCTCAGGGCACCACTGTCCC...TGGGGTGGGCATGGGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp TATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGCGCTGCACCGGGCCCTaGGGGGAAGGCTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: YSGHVACGAGQCPPWGTGRCTGP*GEGSSG
Trigger: TCCTGAGGAGCCTTCCCCGCAGGGCCCGGTGCAGCG...CCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp CACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGACACGTGGCATGCGGTaGTGGGCAGTGCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: HVACGAGQCPPWGTGWRVTRGMR*WAVPTV
Trigger: CACGGTGGGCACTGCCCAGCACCGCATGCCACGTGT...CACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCTGACCTCAGACACCTaGTCCCCACCCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GHSSSWGCPRPRWQVCCRLTSDT*SPPQGR
Trigger: GCGGCCCTGGGGTGGGGAGCAGGTGTCTGAGGTCAG...GCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp CGCGCGCTGCCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RALPCRLRPKLTPSSAARSRSDG*ESTLGL
Trigger: CAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGA...GCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGGCAGCGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR CCA 90 bp CCCCCGCGCGCTGCCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCTGGATGCGGTGGTGCTaGATGAAGCCCGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: PPRAALPAPTEVDSQLGSWMRWC*MKPDQP
Trigger: CGGCTGGTCGGGCTTCATCCAGCACCACCGCATCCA...GCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGGCAGCGCGCGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR CCA 90 bp TATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGCGTGGCATGCGGTGCTaGGCAGTGCCCACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: YSGHVACGAGQCPPWGTGRGMRC*AVPTVG
Trigger: CCCCACGGTGGGCACTGCCCAGCACCGCATGCCACG...CCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp CTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCTCCACGTGGGGCCACTaGCGCAGGTGGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLMGLPQASVASVLPPSSSTWGH*RRWLWA
Trigger: AGCCCACAGCCACCTGCGCCAGTGGCCCCACGTGGA...GGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCTCCACGTGGGGCCACTaGCGCAGGTGGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTAPHGAAPGLGGKCAAASTWGH*RRWLWA
Trigger: AGCCCACAGCCACCTGCGCCAGTGGCCCCACGTGGA...GGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GGACCATCCACAGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCACGGCAGGAGTCCACGTaGGGCCACTGGCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPSTVTTAAVPVHGATVARQEST*GHWRRW
Trigger: CCACCTGCGCCAGTGGCCCCACGTGGACTCCTGCCG...TGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGTGGATGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp TGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGGGGGACAGAAGGGGACTCCTaGATGTCCCCTAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CGAGQCPPWGTGWRVGWGTEGDS*MSPRAA
Trigger: GGCAGCCCTAGGGGACATTCAGGAGTCCCCTTCTGT...CCCCCAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp CGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGCCGGTGATGAGAGACTaGCAGGGGACGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: RGMRCWAVPTVGDGVEGGPVMRD*QGTGQK
Trigger: CTTCTGTCCCGTCCCCTGTCAGTCTCTCATCACCGG...CCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp TATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGGGCTCCGACCGAAGTTaGCTCCCAGCTCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: YSGHVACGAGQCPPWGTGGSDRS*LPARQP
Trigger: GGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCC...CCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp CCACAGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGATCACCACGGCGGCCGTaGCGGTGCACGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: PQSPRRPCRCTEPQWQDRSPRRP*RCTEPQ
Trigger: CTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGA...TCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGTGG
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp TTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGCGTGGCATGCGGTGCTaGGCAGTGCCCACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LFRTRGMRCWAVPTVGDGRGMRC*AVPTVG
Trigger: CCCCACGGTGGGCACTGCCCAGCACCGCATGCCACG...CCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp GGGCGTTGCAGGGTGACCCAGAGCTGCTGGGACCATCCACAGTCACCACGGCGGCGGCAGGAGTCCACGTaGGGCCACTGGCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRCRVTQSCWDHPQSPRRRQEST*GHWRRW
Trigger: CCACCTGCGCCAGTGGCCCCACGTGGACTCCTGCCG...CCGCCGTGGTGACTGTGGATGGTCCCAGCAGCTCTGGGTCACCCTGCAACGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp GGGCGTTGCAGGGTGACCCAGAGCTGCTGGGACCATCCACAGTCACCACGGCGGGGGACAGTGGTGCCCTaGGCCAGAAGCCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRCRVTQSCWDHPQSPRRGTVVP*ARSPSP
Trigger: TGGGCTGGGGCTTCTGGCTCAGGGCACCACTGTCCC...CCGCCGTGGTGACTGTGGATGGTCCCAGCAGCTCTGGGTCACCCTGCAACGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp TCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCCAGCACTAAGTGTTGGTaGGGACCCGGAGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SSWGCPRPRWQVCCRPAPSTKCW*GPGAWG
Trigger: CCCCCAGGCTCCGGGTCCTCACCAACACTTAGTGCT...GGGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp GCTGCTGGGACCATCCACAGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGCACTAAGTGTTGGTaGGGACCCGGAGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AAGTIHSHHGGRAGARSHSTKCW*GPGAWG
Trigger: CCCCCAGGCTCCGGGTCCTCACCAACACTTAGTGCT...GTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGTGGATGGTCCCAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp GCGCTGCCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGTGTGGATGCGGTGGTaGTGGATGAAGCCCGACCAG +
Preference number: 4 (lower is better)
Translates to: ALPCRLRPKLTPSSAARSVWMRW*WMKPDQ
Trigger: CTGGTCGGGCTTCATCCAGCACCACCGCATCCACAC...CGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGGCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR GCA 90 bp GGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGTGGATGCGGTGGTaGTGGATGAAGCCCGACCAG +
Preference number: 4 (lower is better)
Translates to: GHVACGAGQCPPWGTGWRVWMRW*WMKPDQ
Trigger: CTGGTCGGGCTTCATCCAGCACCACCGCATCCACAC...CCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp AGGACCCGGAGCCTGGGGGACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTTGCAGGTGGCTGTGGGCTaGAGTCACCGCCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RTRSLGDARAPEGASKPLQVAVG*SHRLGK
Trigger: CTTCCCGAGGCGGTGACTGCAGCCCACAGCCACCTG...CAAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTCCCCCAGGCTCCGGGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp GAGGACCCGGAGCCTGGGGGACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTTAGCTCCTCATGGGGCTaGCCCAGGCCTCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: EDPEPGGRQSSRGRLKALSSSWG*PRPRWQ
Trigger: TTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCT...AAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTCCCCCAGGCTCCGGGTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp CCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTAGGGCCGCCCAGATGTaGGCGAGGGCTCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: PRRPCRCTEPQWQDRPWGRAAQM*ARAQHC
Trigger: ACAGTGCTGAGCCCTCGCCCACATCTGGGCGGCCCT...ACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp CCCAGAGCTGCTGGGACCATCCACAGTCACCACGGCGGCCGTGCCGGTGCACGGCCGGTGATGAGAGACTaGCAGGGGACGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: PRAAGTIHSHHGGRAGARPVMRD*QGTGQK
Trigger: CTTCTGTCCCGTCCCCTGTCAGTCTCTCATCACCGG...CCGTGCACCGGCACGGCCGCCGTGGTGACTGTGGATGGTCCCAGCAGCTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp TTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGTGCGGTGGTGCTGGATaGAGCCCGACCAGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: FIPDTWHAVLGSAHRGGRCGGAG*SPTSRG
Trigger: TCCGCGGCTGGTCGGGCTTCATCCAGCACCACCGCA...CCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp CTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCGGGGCAGAGGTGAGCTaGTGCCAGGGAAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLMGLPQASVASVLPPSSGAEVS*CQGRKG
Trigger: CCCTTTTCTTCCCTGGCATCAGCTCACCTCTGCCCC...GGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR GCA 90 bp GAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGATGCGGTGCTGGGCAGTaGCCACCGTGGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: EFIPDTWHAVLGSAHRGGCGAGQ*PPWGTG
Trigger: CCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCA...TCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GGTGCCAGCATTGGGGGTGCCACAGAGGTGGGCATTGTGAGGAGCCTGGCACGCCTGACCTCAGACACCTaGTCCCCACCCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GASIGGATEVGIVRSLARLTSDT*SPPQGR
Trigger: GCGGCCCTGGGGTGGGGAGCAGGTGTCTGAGGTCAG...GCGTGCCAGGCTCCTCACAATGCCCACCTCTGTGGCACCCCCAATGCTGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR GCA 90 bp AGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGCGGCGGCCGTGCCGGTaGACGGAGCCACAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RMWSIWAQLLMGLPQASVRRPCR*TEPQWQ
Trigger: TTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCG...CACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCTCCACGTGGGGCCACTaGCGCAGGTGGCTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: AEDVVHMGTAPHGAAPGLSTWGH*RRWLWA
Trigger: AGCCCACAGCCACCTGCGCCAGTGGCCCCACGTGGA...GAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp CCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCGGCAGGAGTCCACGTaGGGCCACTGGCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PCRGCGPYGHSSSWGCPRRQEST*GHWRRW
Trigger: CCACCTGCGCCAGTGGCCCCACGTGGACTCCTGCCG...CCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp ACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTTCACTGTGTCCAGCTaGGGCCGGCAGGAGTCCACG +
Preference number: 4 (lower is better)
Translates to: TTAAVPVHGATVARQTMGFTVSS*GRQEST
Trigger: CGTGGACTCCTGCCGGCCCCAGCTGGACACAGTGAA...CCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp ACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGGAGGTGCAGGGGACCTaGACACAGCTCCAACCAGGC +
Preference number: 4 (lower is better)
Translates to: TTAAVPVHGATVARQTMGEVQGT*TQLQPG
Trigger: GCCTGGTTGGAGCTGTGTCCAGGTCCCCTGCACCTC...CCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp CTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCTTCCCTGAGACCTGCTaGAGGTGTCACACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LLMGLPQASVASVLPPSSFPETC*RCHTWD
Trigger: GTCCCAGGTGTGACACCTTCAGCAGGTCTCAGGGAA...GGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp TGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCCATGCCCACCCCATTCCCTGAGACCTGCTaGAGGTGTCACACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: CPRPRWQVCCRPAPMPTPFPETC*RCHTWD
Trigger: GTCCCAGGTGTGACACCTTCAGCAGGTCTCAGGGAA...TGGGGTGGGCATGGGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp CCCAGAGCTGCTGGGACCATCCACAGTCACCACGGCGGCCGTGCCGGTGCACGGGGCTGCCATCTTCCCTaGGACCTGCTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PRAAGTIHSHHGGRAGARGCHLP*DLLKVS
Trigger: TGACACCTTCAGCAGGTCTCAGGGAAGATGGCAGCC...CCGTGCACCGGCACGGCCGCCGTGGTGACTGTGGATGGTCCCAGCAGCTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp TTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGGCTGCCATCTTCCCTaGGACCTGCTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: FRTRGMRCWAVPTVGDGVGCHLP*DLLKVS
Trigger: TGACACCTTCAGCAGGTCTCAGGGAAGATGGCAGCC...CACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp CCCCCGCGCGCTGCCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCGCAGCGAGTTATACTTaGAACTCTTGCCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PPRAALPAPTEVDSQLGSAASYT*NSCRRP
Trigger: AGGCCTGCGGCAAGAGTTTCAAGTATAACTCGCTGC...GCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGGCAGCGCGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR TCA 90 bp CGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGGCAGCGAGTTATACTTaGAACTCTTGCCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGMRCWAVPTVGDGVEGGAASYT*NSCRRP
Trigger: AGGCCTGCGGCAAGAGTTTCAAGTATAACTCGCTGC...CCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GGTGCCAGCATTGGGGGTGCCACAGAGGTGGGCATTGTGAGGAGCCTGGCACGCCCAGGAAGGGGGTGGTaGCAGCATTGGGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GASIGGATEVGIVRSLARPGRGW*QHWGCH
Trigger: GTGGCACCCCCAATGCTGGCACCACCCCCTTCCTGG...GCGTGCCAGGCTCCTCACAATGCCCACCTCTGTGGCACCCCCAATGCTGGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR GCA 90 bp CCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCAGCTCCTCATGGGGCTaGCCCAGGCCTCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PYGHSSSWGCPRPRWQVCSSSWG*PRPRWQ
Trigger: TTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCT...GCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp CCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGGCGCAACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGC +
Preference number: 4 (lower is better)
Translates to: PCRLRPKLTPSSAARSGATSSTS*RSRSDG
Trigger: GCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGT...TGCGCCCGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR CCA 90 bp GCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGGACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGC +
Preference number: 4 (lower is better)
Translates to: ACGAGQCPPWGTGWRVGWTSSTS*RSRSDG
Trigger: GCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGT...CCAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp GGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGTTTATTCCGGACACGTaGCATGCGGTGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GMRCWAVPTVGDGVEGGLFIPDT*HAVLGS
Trigger: ACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAA...CAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp TCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGTGGCGCAGGTGGCTGTaGGCTGCAGTCACCGCCTCG +
Preference number: 4 (lower is better)
Translates to: SIWAQLLMGLPQASVASVWRRWL*AAVTAS
Trigger: CGAGGCGGTGACTGCAGCCCACAGCCACCTGCGCCA...CACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp TGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGGCCACTGGCGCAGGTaGCTGTGGGCTGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: CGPYGHSSSWGCPRPRWQGHWRR*LWAAVT
Trigger: GGTGACTGCAGCCCACAGCCACCTGCGCCAGTGGCC...TTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp TCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCCTGCACGGAGCCACAGTaGCAAGACAGACCATGGGGT +
Preference number: 4 (lower is better)
Translates to: SSWGCPRPRWQVCCRPAPCTEPQ*QDRPWG
Trigger: ACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCA...GGGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp GAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACCCTCGTCAGGGGCCTaGGAGCCAGGAGAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: EFIPDTWHAVLGSAHRGGPSSGA*EPGERG
Trigger: TCCACGCTCTCCTGGCTCTCAGGCCCCTGACGAGGG...TCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp CACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGGAGGGAGGAGTTCCTaGTTCACTGTGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HHGGRAGARSHSGKTDHGGGRSS*FTVSSW
Trigger: CCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCC...CCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp CCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGGCGCAGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PCRLRPKLTPSSAARSGAARRCL*RSPLPL
Trigger: TAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGC...TGCGCCCGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR GCA 90 bp AGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGCCTCGGTGGCAAGTGTaGTGCCGCCCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: RMWSIWAQLLMGLPQASVPRWQV*CRPAPM
Trigger: CATGGGAGCTGGGCGGCAGCACACTTGCCACCGAGG...CACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp GGGGAGGGAGGAGTTCCTGATTCACTGTGTCCAGCTGGGGCCGGCAGGAGTCCACCTCGGTGGCAAGTGTaGTGCCGCCCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: GEGGVPDSLCPAGAGRSPPRWQV*CRPAPM
Trigger: CATGGGAGCTGGGCGGCAGCACACTTGCCACCGAGG...TGGACTCCTGCCGGCCCCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
CDS-3UTR CCA 90 bp AGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATTCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SHHGGRAGARSHSGKTDHSRSDG*ESTLGL
Trigger: CAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGA...ATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521682.5
CDS-3UTR CCA 90 bp AAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGCCGGCCGCTCCGCGCTaGATTCAGGCCCGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: KEFIPDTWHAVLGSAHRGPAAPR*IQARSR
Trigger: CCGGCTTCGGGCCTGAATCCAGCGCGGAGCGGCCGG...CCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp CGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTTCACTGTGTCCAGCTaGGGCCGGCAGGAGTCCACG +
Preference number: 4 (lower is better)
Translates to: RGCGPYGHSSSWGCPRPRFTVSS*GRQEST
Trigger: CGTGGACTCCTGCCGGCCCCAGCTGGACACAGTGAA...CCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GAGGACCCGGAGCCTGGGGGACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTTGATAACTCGTGGATCTaGGGGGACAGTGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: EDPEPGGRQSSRGRLKALDNSWI*GDSGAL
Trigger: CAGGGCACCACTGTCCCCCCAGATCCACGAGTTATC...AAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTCCCCCAGGCTCCGGGTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GGGGGTGGTGCCAGCATTGGGGGTGCCACAGAGGTGGGCATTGTGAGGAGCCTGGAGGTGCAGGGGACCTaGACACAGCTCCAACCAGGC +
Preference number: 4 (lower is better)
Translates to: GGGASIGGATEVGIVRSLEVQGT*TQLQPG
Trigger: GCCTGGTTGGAGCTGTGTCCAGGTCCCCTGCACCTC...CAGGCTCCTCACAATGCCCACCTCTGTGGCACCCCCAATGCTGGCACCACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR CCA 90 bp CTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCAGGGCCGCCCAGATGTaGGCGAGGGCTCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: LAEDVVHMGTAPHGAAPGRAAQM*ARAQHC
Trigger: ACAGTGCTGAGCCCTCGCCCACATCTGGGCGGCCCT...GCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
3UTR CAA 72 bp GGGGACGCCAGAGCTCCAGAGGGCGCCTCAAAGCCCTaGCCGAGGATGTGGTCCATATGGGCACAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GDARAPEGASKP*PRMWSIWAQLL
Trigger: GAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTCTGGAGCTCTGGCGTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp TTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGTTCCCTGAGACCTGCTaGAGGTGTCACACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LFRTRGMRCWAVPTVGDGFPETC*RCHTWD
Trigger: GTCCCAGGTGTGACACCTTCAGCAGGTCTCAGGGAA...CCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp CGTTGCAGGGTGACCCAGAGCTGCTGGGACCATCCACAGTCACCACGGCGGCCGTTCCCTGAGACCTGCTaGAGGTGTCACACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: RCRVTQSCWDHPQSPRRPFPETC*RCHTWD
Trigger: GTCCCAGGTGTGACACCTTCAGCAGGTCTCAGGGAA...CGGCCGCCGTGGTGACTGTGGATGGTCCCAGCAGCTCTGGGTCACCCTGCAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp CGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGACAGAAGGGGACTCCTaGATGTCCCCTAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGCGPYGHSSSWGCPRPRTEGDS*MSPRAA
Trigger: GGCAGCCCTAGGGGACATTCAGGAGTCCCCTTCTGT...CCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp TTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGCCGGTGATGAGAGACTaGCAGGGGACGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: FIPDTWHAVLGSAHRGGRPVMRD*QGTGQK
Trigger: CTTCTGTCCCGTCCCCTGTCAGTCTCTCATCACCGG...CCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp CCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCCCGGTGATGAGAGACTaGCAGGGGACGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: PYGHSSSWGCPRPRWQVCPVMRD*QGTGQK
Trigger: CTTCTGTCCCGTCCCCTGTCAGTCTCTCATCACCGG...GCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp AGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATCCGGTGATGAGAGACTaGCAGGGGACGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: SHHGGRAGARSHSGKTDHPVMRD*QGTGQK
Trigger: CTTCTGTCCCGTCCCCTGTCAGTCTCTCATCACCGG...ATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp CCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCGGGACAGTGGTGCCCTaGGCCAGAAGCCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PQSPCRGCGPYGHSSSWGGTVVP*ARSPSP
Trigger: TGGGCTGGGGCTTCTGGCTCAGGGCACCACTGTCCC...GCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp GCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTCACCCTTACGTGCCCAGGAGAGCTaGCATAGACACAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVPVHGATVARQTMGSPLRAQES*HRHRGG
Trigger: CCCACCCCTGTGTCTATGTCAGCTCTCCTGGGCACG...TAAGGGTGACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521682.5
CDS-3UTR GCA 90 bp AAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGGAGAGCGTGGAGCCTaGTCCGGCTTGGGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: KNLFRTRGMRCWAVPTVGGERGA*SGLGSE
Trigger: CTCCGAGCCCAAGCCGGAGCAGGCTCCACGCTCTCC...CCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GAGGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCCAGGTGGCTGTGGGCTaGAGTCACCGCCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: EGASKPLPRMWSIWAQLLQVAVG*SHRLGK
Trigger: CTTCCCGAGGCGGTGACTGCAGCCCACAGCCACCTG...GAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GGGGAGGGAGGAGTTCCTGATTCACTGTGTCCAGCTGGGGCCGGCAGGAGTCCATCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGGVPDSLCPAGAGRSPSRSDG*ESTLGL
Trigger: CAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGA...TGGACTCCTGCCGGCCCCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR CCA 90 bp TATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTTTATTCCGGACACGTaGCATGCGGTGCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: YSGHVACGAGQCPPWGTGFIPDT*HAVLGS
Trigger: ACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAA...CCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp GCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGCACGCGCAGAGCTCTaGTCCCCCAGTAACCCGATT +
Preference number: 4 (lower is better)
Translates to: AEDVVHMGTAPHGAAPGLARAEL*SPSNPI
Trigger: AATCGGGTTACTGGGGGACCAGAGCTCTGCGCGTGC...GAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR CCA 90 bp TGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGAGGTGCAGGGGACCTaGACACAGCTCCAACCAGGC +
Preference number: 4 (lower is better)
Translates to: WSIWAQLLMGLPQASVASEVQGT*TQLQPG
Trigger: GCCTGGTTGGAGCTGTGTCCAGGTCCCCTGCACCTC...ACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCCCAGAGGGAACCCTaGGAGCTTCTCAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: VHMGTAPHGAAPGLGGKCAQREP*ELLKGE
Trigger: CTCCCCCTTGAGAAGCTCCCAGGGTTCCCTCTGGGC...ACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp CGTTGCAGGGTGACCCAGAGCTGCTGGGACCATCCACAGTCACCACGGCGGCCGGTGACCCAGAGCTGCTaGGACCATCCACAGTCACCA +
Preference number: 4 (lower is better)
Translates to: RCRVTQSCWDHPQSPRRPVTQSC*DHPQSP
Trigger: TGGTGACTGTGGATGGTCCCAGCAGCTCTGGGTCAC...CGGCCGCCGTGGTGACTGTGGATGGTCCCAGCAGCTCTGGGTCACCCTGCAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp CCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCGGCTGCCATCTTCCCTaGGACCTGCTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PYGHSSSWGCPRPRWQVCGCHLP*DLLKVS
Trigger: TGACACCTTCAGCAGGTCTCAGGGAAGATGGCAGCC...GCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp GGAGGGGAGGGAGGAGTTCCTGATTCACTGTGTCCAGCTGGGGCCGGCAGGAGTACAGAAGGGGACTCCTaGATGTCCCCTAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GGEGGVPDSLCPAGAGRSTEGDS*MSPRAA
Trigger: GGCAGCCCTAGGGGACATTCAGGAGTCCCCTTCTGT...ACTCCTGCCGGCCCCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
CDS-3UTR TCA 90 bp GGTGCCAGCATTGGGGGTGCCACAGAGGTGGGCATTGTGAGGAGCCTGGCACGCGGAGGGAGGAGTTCCTaGTTCACTGTGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GASIGGATEVGIVRSLARGGRSS*FTVSSW
Trigger: CCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCC...GCGTGCCAGGCTCCTCACAATGCCCACCTCTGTGGCACCCCCAATGCTGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR GCA 90 bp CCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PRRPCRCTEPQWQDRPWGARRCL*RSPLPL
Trigger: TAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGC...ACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp AAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGTCCGGACACGTGGCATaGGGTGCTGGGCAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KNLFRTRGMRCWAVPTVGSGHVA*GAGQCP
Trigger: TGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGA...CCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTCACCCTTAGCCAGTTCTCAAGGGGGAGGTaGAGGGGACCTGGACACAGC +
Preference number: 4 (lower is better)
Translates to: AGARSHSGKTDHGVTLSQFSRGR*RGPGHS
Trigger: GCTGTGTCCAGGTCCCCTGCACCTCCCCCTTGAGAA...CTGGCTAAGGGTGACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp AGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGTCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RIYSGHVACGAGQCPPWGSRSDG*ESTLGL
Trigger: CAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGA...CCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp CCACAGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGAACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGC +
Preference number: 4 (lower is better)
Translates to: PQSPRRPCRCTEPQWQDRTSSTS*RSRSDG
Trigger: GCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGT...TCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGTGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGATGGATGCGGTGGTGCTaGATGAAGCCCGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: EFIPDTWHAVLGSAHRGGWMRWC*MKPDQP
Trigger: CGGCTGGTCGGGCTTCATCCAGCACCACCGCATCCA...TCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp GAGGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCGCCCAGAGGGAACCCTaGGAGCTTCTCAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: EGASKPLPRMWSIWAQLLAQREP*ELLKGE
Trigger: CTCCCCCTTGAGAAGCTCCCAGGGTTCCCTCTGGGC...GAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GGGCTGCAGTCACCGCCTCGGGAAGCATCAGTAACTGGACGGGCCAGAAGGTGTGCCCAGAGGGAACCCTaGGAGCTTCTCAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLQSPPREASVTGRARRCAQREP*ELLKGE
Trigger: CTCCCCCTTGAGAAGCTCCCAGGGTTCCCTCTGGGC...ACACCTTCTGGCCCGTCCAGTTACTGATGCTTCCCGAGGCGGTGACTGCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517468.5
CDS-3UTR CCA 90 bp GGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATAGGGCCGCCCAGATGTaGGCGAGGGCTCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: GRLKALAEDVVHMGTAPHRAAQM*ARAQHC
Trigger: ACAGTGCTGAGCCCTCGCCCACATCTGGGCGGCCCT...ATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp TGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTTCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: WSIWAQLLMGLPQASVASSRSDG*ESTLGH
Trigger: ATGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGA...ACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517468.5
CDS-3UTR CCA 90 bp CACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGGAAGCATCAGTAACTaGACGGGCCAGAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: HHGGRAGARSHSGKTDHGGSISN*TGQKVS
Trigger: AGACACCTTCTGGCCCGTCCAGTTACTGATGCTTCC...CCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp ACAGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: TVTTAAVPVHGATVARQTARRCL*RSPLPL
Trigger: TAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGC...GGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp GGAGGGGAGGGAGGAGTTCCTGATTCACTGTGTCCAGCTGGGGCCGGCAGGAGTTGCCAGCATTGGGGGTaGCACAGAGGTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: GGEGGVPDSLCPAGAGRSCQHWG*HRGGHC
Trigger: ACAATGCCCACCTCTGTGGCACCCCCAATGCTGGCA...ACTCCTGCCGGCCCCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR GCA 90 bp CACCCCAGGAGCTTCCCACGCAAATCTCTGGCCCAGGGTCTCTTTCCAGGGACCTTCTCAAGGGGGAGGTaGAGGGGACCTGGACACAGC +
Preference number: 4 (lower is better)
Translates to: HPRSFPRKSLAQGLFPGTFSRGR*RGPGHS
Trigger: GCTGTGTCCAGGTCCCCTGCACCTCCCCCTTGAGAA...GGTCCCTGGAAAGAGACCCTGGGCCAGAGATTTGCGTGGGAAGCTCCTGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp CGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGC +
Preference number: 4 (lower is better)
Translates to: RGCGPYGHSSSWGCPRPRTSSTS*RSRSDG
Trigger: GCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGT...CCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCACATCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp TGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTCCCTTGCCGAGGATGTaGTCCATATGGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: WSIWAQLLMGLPQASVASPLPRM*SIWAQL
Trigger: GAGCTGTGCCCATATGGACCACATCCTCGGCAAGGG...ACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTCCCTTGCCGAGGATGTaGTCCATATGGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: VHMGTAPHGAAPGLGGKCPLPRM*SIWAQL
Trigger: GAGCTGTGCCCATATGGACCACATCCTCGGCAAGGG...ACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTCACCCTTAGCCAGGTGACCCAGAGCTGCTaGGACCATCCACAGTCACCA +
Preference number: 4 (lower is better)
Translates to: AGARSHSGKTDHGVTLSQVTQSC*DHPQSP
Trigger: TGGTGACTGTGGATGGTCCCAGCAGCTCTGGGTCAC...CTGGCTAAGGGTGACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp TGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTCCAGTAACCCGATTCTaGTCACTCACCGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: WSIWAQLLMGLPQASVASPVTRF*SLTGPE
Trigger: TTCTGGCCCGGTGAGTGAGCAGAATCGGGTTACTGG...ACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR GCA 90 bp CACAGTGGCAAGACAGACCATGGGGTCACCCTTAGCCAGGAGGAAGCACTAAGTCTGACCTCAGACACCTaGTCCCCACCCCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: HSGKTDHGVTLSQEEALSLTSDT*SPPQGR
Trigger: GCGGCCCTGGGGTGGGGAGCAGGTGTCTGAGGTCAG...ACTTAGTGCTTCCTCCTGGCTAAGGGTGACCCCATGGTCTGTCTTGCCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp AAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGAGCCTGCTCCGGCTTaGGCTCGGAGTCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KKNLFRTRGMRCWAVPTVEPAPA*ARSRAR
Trigger: TCTGGCCCGACTCCGAGCCCAAGCCGGAGCAGGCTC...CACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp GGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGGCCACTGGCGCAGGTaGCTGTGGGCTGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: GRGLSTVKSSHITNIAQRGHWRR*LWAAVT
Trigger: GGTGACTGCAGCCCACAGCCACCTGCGCCAGTGGCC...CCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp ACAGACCATGGGGTCACCCTTAGCCAGGAGGAAGCACTAAGTGTTGGTGAGGACGGCCACTGGCGCAGGTaGCTGTGGGCTGCAGTCACC +
Preference number: 4 (lower is better)
Translates to: TDHGVTLSQEEALSVGEDGHWRR*LWAAVT
Trigger: GGTGACTGCAGCCCACAGCCACCTGCGCCAGTGGCC...GTCCTCACCAACACTTAGTGCTTCCTCCTGGCTAAGGGTGACCCCATGGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GGGGAGGGAGGAGTTCCTGATTCACTGTGTCCAGCTGGGGCCGGCAGGAGTCCAAGGATGTGGTCCATATaGGCACAGCTCCTCATGGGG +
Preference number: 4 (lower is better)
Translates to: GEGGVPDSLCPAGAGRSPRMWSI*AQLLMG
Trigger: CCCCATGAGGAGCTGTGCCCATATGGACCACATCCT...TGGACTCCTGCCGGCCCCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
CDS-3UTR CCA 90 bp GCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGGTCACCCTTAGCCAGAGGATGTGGTCCATATaGGCACAGCTCCTCATGGGG +
Preference number: 4 (lower is better)
Translates to: AGARSHSGKTDHGVTLSQRMWSI*AQLLMG
Trigger: CCCCATGAGGAGCTGTGCCCATATGGACCACATCCT...CTGGCTAAGGGTGACCCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp CACCCCAGGAGCTTCCCACGCAAATCTCTGGCCCAGGGTCTCTTTCCAGGGACCCCCTTGCCGAGGATGTaGTCCATATGGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: HPRSFPRKSLAQGLFPGTPLPRM*SIWAQL
Trigger: GAGCTGTGCCCATATGGACCACATCCTCGGCAAGGG...GGTCCCTGGAAAGAGACCCTGGGCCAGAGATTTGCGTGGGAAGCTCCTGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp AAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGTTCCCTGAGACCTGCTaGAGGTGTCACACCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KNLFRTRGMRCWAVPTVGFPETC*RCHTWD
Trigger: GTCCCAGGTGTGACACCTTCAGCAGGTCTCAGGGAA...CCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp GCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCATCTTCCCTaGGACCTGCTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: APQSPCRGCGPYGHSSSWGCHLP*DLLKVS
Trigger: TGACACCTTCAGCAGGTCTCAGGGAAGATGGCAGCC...CCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp AAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGTGTGGGTCCGCAGGTaGCGGAAGAAGTGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: KKNLFRTRGMRCWAVPTVVWVRR*RKKCER
Trigger: CCGCTCGCACTTCTTCCGGCACCTGCGGACCCACAC...CACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp CAACAATCAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCTGCGGTGCTGGGCAGTaGCCACCGTGGGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: QQSKRIYSGHVACGAGQCCGAGQ*PPWGTG
Trigger: CCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCA...GCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTGATTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp AAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGTCCGGACACGTGGCATaGGGTGCTGGGCAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KKNLFRTRGMRCWAVPTVSGHVA*GAGQCP
Trigger: TGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGA...CACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GAGGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCGCGCCTCAAAGCCCTTaGCGAGGATGTGGTCCATAT +
Preference number: 4 (lower is better)
Translates to: EGASKPLPRMWSIWAQLLAPQSP*RGCGPY
Trigger: ATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGC...GAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp CCAGATGTGGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGTCACCACGGCGGCCGTaGCGGTGCACGGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: PDVGEGSALLNPAISLTSSPRRP*RCTEPQ
Trigger: CTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGA...CGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCCACATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGAACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGC +
Preference number: 4 (lower is better)
Translates to: EFIPDTWHAVLGSAHRGGTSSTS*RSRSDG
Trigger: GCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGT...TCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp CCAACAATCAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCGGCCGCTCCGCGCTaGATTCAGGCCCGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: PTIKKNLFRTRGMRCWAVPAAPR*IQARSR
Trigger: CCGGCTTCGGGCCTGAATCCAGCGCGGAGCGGCCGG...CACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTGATTGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp GGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGATAACTCGTGGATCTaGGGGGACAGTGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GRLKALAEDVVHMGTAPHDNSWI*GDSGAL
Trigger: CAGGGCACCACTGTCCCCCCAGATCCACGAGTTATC...ATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp CACCCCAGGAGCTTCCCACGCAAATCTCTGGCCCAGGGTCTCTTTCCAGGGACCTCCCACGCAAATCTCTaGCCCAGGGTCTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HPRSFPRKSLAQGLFPGTSHANL*PRVSFQ
Trigger: CTGGAAAGAGACCCTGGGCCAGAGATTTGCGTGGGA...GGTCCCTGGAAAGAGACCCTGGGCCAGAGATTTGCGTGGGAAGCTCCTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GGAGGGGAGGGAGGAGTTCCTGATTCACTGTGTCCAGCTGGGGCCGGCAGGAGTGGAAGCATCAGTAACTaGACGGGCCAGAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GGEGGVPDSLCPAGAGRSGSISN*TGQKVS
Trigger: AGACACCTTCTGGCCCGTCCAGTTACTGATGCTTCC...ACTCCTGCCGGCCCCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517468.5
CDS-3UTR GCA 90 bp AGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: RIYSGHVACGAGQCPPWGARRCL*RSPLPL
Trigger: TAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGC...CCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp CAACAATCAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCGCTGCACCGGGCCCTaGGGGGAAGGCTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QQSKRIYSGHVACGAGQCRCTGP*GEGSSG
Trigger: TCCTGAGGAGCCTTCCCCGCAGGGCCCGGTGCAGCG...GCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTGATTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp AAGACAGACCATGGGGTCACCCTTAGCCAGGAGGAAGCACTAAGTGTTGGTGAGCAGGTGGCTGTGGGCTaGAGTCACCGCCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: KTDHGVTLSQEEALSVGEQVAVG*SHRLGK
Trigger: CTTCCCGAGGCGGTGACTGCAGCCCACAGCCACCTG...CTCACCAACACTTAGTGCTTCCTCCTGGCTAAGGGTGACCCCATGGTCTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAACTGGCGCAGGTGGCTGTaGGCTGCAGTCACCGCCTCG +
Preference number: 4 (lower is better)
Translates to: EGSALLNPAISLTSPRGNWRRWL*AAVTAS
Trigger: CGAGGCGGTGACTGCAGCCCACAGCCACCTGCGCCA...GTTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGAGGATGTGGTCCATATaGGCACAGCTCCTCATGGGG +
Preference number: 4 (lower is better)
Translates to: APQSPCRGCGPYGHSSSWRMWSI*AQLLMG
Trigger: CCCCATGAGGAGCTGTGCCCATATGGACCACATCCT...CCATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp CAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTACAGAAGGGGACTCCTaGATGTCCCCTAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QKEFIPDTWHAVLGSAHRTEGDS*MSPRAA
Trigger: GGCAGCCCTAGGGGACATTCAGGAGTCCCCTTCTGT...ACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp CAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGTGTGGATGCGGTGGTaGTGGATGAAGCCCGACCAG +
Preference number: 4 (lower is better)
Translates to: QKEFIPDTWHAVLGSAHRVWMRW*WMKPDQ
Trigger: CTGGTCGGGCTTCATCCAGCACCACCGCATCCACAC...ACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp GAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAACCCTCGGTGGCAAGTGTaGTGCCGCCCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: EGSALLNPAISLTSPRGNPRWQV*CRPAPM
Trigger: CATGGGAGCTGGGCGGCAGCACACTTGCCACCGAGG...GTTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp ACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAACCCTGGGAGCTTAGCTCCTCATGGGGCTaGCCCAGGCCTCGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: TVKSSHITNIAQREPWELSSSWG*PRPRWQ
Trigger: TTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCT...AAGCTCCCAGGGTTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GGGCGCCTCAAAGCCCTTGCCGAGGATGTGGTCCATATGGGCACAGCTCCTCATGGAAGCATCAGTAACTaGACTGGCATTAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GRLKALAEDVVHMGTAPHGSISN*TGIRVG
Trigger: CCCCACTCTAATGCCAGTCCAGTTACTGATGCTTCC...ATGAGGAGCTGTGCCCATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR CCA 90 bp CTGTGGGCTGCAGTCACCGCCTCGGGAAGCATCAGTAACTGGACTGGCATTAGATCCCACGCAAATCTCTaGCCCAGGGTCTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LWAAVTASGSISNWTGIRSHANL*PRVSFQ
Trigger: CTGGAAAGAGACCCTGGGCCAGAGATTTGCGTGGGA...TCTAATGCCAGTCCAGTTACTGATGCTTCCCGAGGCGGTGACTGCAGCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS-3UTR TCA 90 bp CCAGATGTGGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGACAGAAGGGGACTCCTaGATGTCCCCTAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PDVGEGSALLNPAISLTSTEGDS*MSPRAA
Trigger: GGCAGCCCTAGGGGACATTCAGGAGTCCCCTTCTGT...CGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCCACATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp AAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGCAGCGAGTTATACTTaGAACTCTTGCCGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KRIYSGHVACGAGQCPPWAASYT*NSCRRP
Trigger: AGGCCTGCGGCAAGAGTTTCAAGTATAACTCGCTGC...CCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR GCA 90 bp AGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAACCCTGGGAGTTCTCAAGGGGGAGGTaGAGGGGACCTGGACACAGC +
Preference number: 4 (lower is better)
Translates to: STVKSSHITNIAQREPWEFSRGR*RGPGHS
Trigger: GCTGTGTCCAGGTCCCCTGCACCTCCCCCTTGAGAA...CTCCCAGGGTTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp CAACAATCAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCTCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QQSKRIYSGHVACGAGQCSRSDG*ESTLGL
Trigger: CAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGA...GCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTGATTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp CAACAATCAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCTGGATGCGGTGGTGCTaGATGAAGCCCGACCAGCCG +
Preference number: 4 (lower is better)
Translates to: QQSKRIYSGHVACGAGQCWMRWC*MKPDQP
Trigger: CGGCTGGTCGGGCTTCATCCAGCACCACCGCATCCA...GCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTGATTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CCA 90 bp TTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAACCCTGGGAGCTTCTCATTCACTGTGTCCAGCTaGGGCCGGCAGGAGTCCACG +
Preference number: 4 (lower is better)
Translates to: LNPAISLTSPRGNPGSFSFTVSS*GRQEST
Trigger: CGTGGACTCCTGCCGGCCCCAGCTGGACACAGTGAA...TGAGAAGCTCCCAGGGTTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000517468.5
CDS-3UTR CCA 90 bp TGTGGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGGATAACTCGTGGATCTaGGGGGACAGTGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CGRGLSTVKSSHITNIAQDNSWI*GDSGAL
Trigger: CAGGGCACCACTGTCCCCCCAGATCCACGAGTTATC...CTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp GATGTGGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGC +
Preference number: 4 (lower is better)
Translates to: DVGEGSALLNPAISLTSPTSSTS*RSRSDG
Trigger: GCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGT...GGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CCA 90 bp AAGACAGACCATGGGGTCACCCTTAGCCAGGAGGAAGCACTAAGTGTTGGTGAGTCCCACGCAAATCTCTaGCCCAGGGTCTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KTDHGVTLSQEEALSVGESHANL*PRVSFQ
Trigger: CTGGAAAGAGACCCTGGGCCAGAGATTTGCGTGGGA...CTCACCAACACTTAGTGCTTCCTCCTGGCTAAGGGTGACCCCATGGTCTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR TCA 90 bp CCAACAATCAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGGGCTGCCATCTTCCCTaGGACCTGCTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PTIKKNLFRTRGMRCWAVGCHLP*DLLKVS
Trigger: TGACACCTTCAGCAGGTCTCAGGGAAGATGGCAGCC...CACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTGATTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR TCA 90 bp ACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAACCCTGGGAGCTTGGAGGGAGGAGTTCCTaGTTCACTGTGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TVKSSHITNIAQREPWELGGRSS*FTVSSW
Trigger: CCAGCTGGACACAGTGAATCAGGAACTCCTCCCTCC...AAGCTCCCAGGGTTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp TGTGGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: CGRGLSTVKSSHITNIAQARRCL*RSPLPL
Trigger: TAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGC...CTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR GCA 90 bp AGCACTGTTAAATCCAGCCATATCACTAACATCGCCCAGAGGGAACCCTGGGAGGCGCCTCAAAGCCCTTaGCGAGGATGTGGTCCATAT +
Preference number: 4 (lower is better)
Translates to: STVKSSHITNIAQREPWEAPQSP*RGCGPY
Trigger: ATATGGACCACATCCTCGGCAAGGGCTTTGAGGCGC...CTCCCAGGGTTCCCTCTGGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS CCA 90 bp CGCAAGGGACGGCCCCAGGCGGCTGGCCCGCCGGCCGCTCCGCGCTaGATTCAGGCCCGAAGCCGGCGCTGCACCGGGCCCTGCGGGGAA +
Preference number: 5 (lower is better)
Translates to: RKGRPQAAGPPAAPR*IQARSRRCTGPCGE
Trigger: TTCCCCGCAGGGCCCGGTGCAGCGCCGGCTTCGGGCCTGAATCCAGCGCGGAGCGGCCGGCGGGCCAGCCGCCTGGGGCCGTCCCTTGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340042.2
ENST00000522033.1
ENST00000522479.1
ENST00000523522.5
ENST00000523812.1
CDS CCA 90 bp CGCAAGGGACGGCCCCAGGCGGCTGGCCCGCCGGCCGCTCCGCGCTaGATTCAGGCCCGAAGCCGGCGCTGCACCGGGCCCGGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: RKGRPQAAGPPAAPR*IQARSRRCTGPGPE
Trigger: TTCTGGCCCGGGCCCGGTGCAGCGCCGGCTTCGGGCCTGAATCCAGCGCGGAGCGGCCGGCGGGCCAGCCGCCTGGGGCCGTCCCTTGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS GCA 90 bp GCTCCGCGCTGGATTCAGGCCCGAAGCCGGCGCTGCACCGGGCCCTaGGGGGAAGGCTCCTCAGGAGGCTGCGCAGCGCCCCGCCCGCCC +
Preference number: 5 (lower is better)
Translates to: APRWIQARSRRCTGP*GEGSSGGCAAPRPP
Trigger: GGGCGGGCGGGGCGCTGCGCAGCCTCCTGAGGAGCCTTCCCCGCAGGGCCCGGTGCAGCGCCGGCTTCGGGCCTGAATCCAGCGCGGAGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340042.2
ENST00000522033.1
ENST00000522479.1
ENST00000523522.5
ENST00000523812.1
CDS GCA 90 bp GGCCCGCCGGCCGCTCCGCGCTGGATTCAGGCCCGAAGCCGGCGCTaGACCGGGCCCTGCGGGGAAGGCTCCTCAGGAGGCTGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: GPPAAPRWIQARSRR*TGPCGEGSSGGCAA
Trigger: CGCTGCGCAGCCTCCTGAGGAGCCTTCCCCGCAGGGCCCGGTGCAGCGCCGGCTTCGGGCCTGAATCCAGCGCGGAGCGGCCGGCGGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340042.2
ENST00000522033.1
ENST00000522479.1
ENST00000523522.5
ENST00000523812.1
CDS-3UTR CAA 90 bp CGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGGGAGCCTGCTCCGGCTaGGGCTCGGAGTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RGMRCWAVPTVGDGVEGGGACSG*GSESGQ
Trigger: CTGGCCCGACTCCGAGCCCAAGCCGGAGCAGGCTCC...CCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp CTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGGCGCACCGGGCCCGGCCGCTGCTaGCTGCACGAGCGTCACGCG +
Preference number: 5 (lower is better)
Translates to: LPAPTEVDSQLGSPLGRTGPGRC*LHERHA
Trigger: CGCGTGACGCTCGTGCAGCAAGCAGCGGCCGGGCCC...GGTGCGCCCGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR CAA 90 bp TCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGGGAGCCTGCTCCGGCTaGGGCTCGGAGTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: SGHVACGAGQCPPWGTGWGACSG*GSESGQ
Trigger: CTGGCCCGACTCCGAGCCCAAGCCGGAGCAGGCTCC...CCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp CCCCCGCGCGCTGCCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCGGCTCCGACCGAAGTaGACTCCCAGCTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PPRAALPAPTEVDSQLGSRLRPK*TPSSAA
Trigger: GGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCG...GCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGGCAGCGCGCGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS GCA 90 bp CTGGGGGTCAGGGAGGCTGGGGCTCACCTCCACCCTCTGGACCACTaGCTCCGCTCCTCTCTGACCGCCACGTGCTCCCGGGCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LGVREAGAHLHPLDH*LRSSLTATCSRAVA
Trigger: GGCCACAGCCCGGGAGCACGTGGCGGTCAGAGAGGAGCGGAGGCAGTGGTCCAGAGGGTGGAGGTGAGCCCCAGCCTCCCTGACCCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522033.1
ENST00000523812.1
CDS-3UTR CAA 90 bp GCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGGCGGCTCCGACCGAAGTaGACTCCCAGCTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ACGAGQCPPWGTGWRVGWRLRPK*TPSSAA
Trigger: GGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCG...CCAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp TCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGGCCAGGGGAGCCATGTaGATGCCCATGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SGHVACGAGQCPPWGTGWARGAM*MPMEVK
Trigger: CTTCACCTCCATGGGCATCAACATGGCTCCCCTGGC...CCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp CCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGGCGCAGCCAGGGGAGCCATGTaGATGCCCATGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PCRLRPKLTPSSAARSGAARGAM*MPMEVK
Trigger: CTTCACCTCCATGGGCATCAACATGGCTCCCCTGGC...TGCGCCCGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR CAA 90 bp AGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGGGGCCCGGCCGCTGCTaGCTGCACGAGCGTCACGCG +
Preference number: 5 (lower is better)
Translates to: RIYSGHVACGAGQCPPWGGPGRC*LHERHA
Trigger: CGCGTGACGCTCGTGCAGCAAGCAGCGGCCGGGCCC...CCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCT
69% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp TTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGCGGCTCCGACCGAAGTaGACTCCCAGCTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LFRTRGMRCWAVPTVGDGRLRPK*TPSSAA
Trigger: GGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCG...CCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS GCA 90 bp GGGGCGGTGAGGACATCACCTGAGACAGCCTTGCCACCTTTGCCCTaGGCTGGGACACCACTGGAGAGGACCTGGCAGCCCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GAVRTSPETALPPLP*AGTPLERTWQPCWG
Trigger: GCCCCAGCAGGGCTGCCAGGTCCTCTCCAGTGGTGTCCCAGCGCAGGGCAAAGGTGGCAAGGCTGTCTCAGGTGATGTCCTCACCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS CCA 90 bp ACCGCCACGTGCTCCCGGGCTGTGGCCCTGACACAGGACACCTCCTaGCCCTCCCAATCCCAACAGCAGGCCCGCTGCTTGGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TATCSRAVALTQDTS*PSQSQQQARCLGFS
Trigger: AGAGAAGCCCAAGCAGCGGGCCTGCTGTTGGGATTGGGAGGGCCAGGAGGTGTCCTGTGTCAGGGCCACAGCCCGGGAGCACGTGGCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS-3UTR CAA 90 bp GCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCGCCAGGGGAGCCATGTaGATGCCCATGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: APHGAAPGLGGKCAAAQLARGAM*MPMEVK
Trigger: CTTCACCTCCATGGGCATCAACATGGCTCCCCTGGC...GAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000521682.5
CDS-3UTR CAA 90 bp TTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGCCAGGGGAGCCATGTaGATGCCCATGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FRTRGMRCWAVPTVGDGVARGAM*MPMEVK
Trigger: CTTCACCTCCATGGGCATCAACATGGCTCCCCTGGC...CACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp GCGCTGCCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGG +
Preference number: 5 (lower is better)
Translates to: ALPCRLRPKLTPSSAARSHFLYV*EIQVGR
Trigger: CCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTG...CGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGGCAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR CAA 90 bp CTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCGGCGCCTCAAAGCCCTaGCCGAGGATGTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: LLMGLPQASVASVLPPSSGASKP*PRMWSI
Trigger: TATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCC...GGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CAA 90 bp CTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCTGCCGCCCAGCTCCCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGG +
Preference number: 5 (lower is better)
Translates to: LLMGLPQASVASVLPPSSHFLYV*EIQVGR
Trigger: CCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTG...GGAGCTGGGCGGCAGCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CAA 90 bp TGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGTGGAGGGTGGGTTGGGGGTTATACTTGAAACTCTaGCCGCAGGCCTCGCACCTG +
Preference number: 5 (lower is better)
Translates to: CGAGQCPPWGTGWRVGWGLYLKL*PQASHL
Trigger: CAGGTGCGAGGCCTGCGGCAAGAGTTTCAAGTATAA...CCCCCAACCCACCCTCCACCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp GGGCGTTGCAGGGTGACCCAGAGCTGCTGGGACCATCCACAGTCACCACGGCGGGCCAGGGGAGCCATGTaGATGCCCATGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GRCRVTQSCWDHPQSPRRARGAM*MPMEVK
Trigger: CTTCACCTCCATGGGCATCAACATGGCTCCCCTGGC...CCGCCGTGGTGACTGTGGATGGTCCCAGCAGCTCTGGGTCACCCTGCAACGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521682.5
CDS-3UTR CAA 90 bp CACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCATGGGCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGG +
Preference number: 5 (lower is better)
Translates to: HHGGRAGARSHSGKTDHGHFLYV*EIQVGR
Trigger: CCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTG...CCCATGGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CAA 90 bp CTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGGCGCACCTTATACTTGAAACTCTaGCCGCAGGCCTCGCACCTG +
Preference number: 5 (lower is better)
Translates to: LPAPTEVDSQLGSPLGRTLYLKL*PQASHL
Trigger: CAGGTGCGAGGCCTGCGGCAAGAGTTTCAAGTATAA...GGTGCGCCCGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR CAA 90 bp CCCTGCCGGCTCCGACCGAAGTTGACTCCCAGCTCGGCAGCCCGCTCGGGCGCAAGCAGCGAGTTATACTaGAAACTCTTGCCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: PCRLRPKLTPSSAARSGASSELY*KLLPQA
Trigger: GGCCTGCGGCAAGAGTTTCAAGTATAACTCGCTGCT...TGCGCCCGAGCGGGCTGCCGAGCTGGGAGTCAACTTCGGTCGGAGCCGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS-3UTR CAA 90 bp ACAGTCACCACGGCGGCCGTGCCGGTGCACGGAGCCACAGTGGCAAGACAGACCGGCGCCTCAAAGCCCTaGCCGAGGATGTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: TVTTAAVPVHGATVARQTGASKP*PRMWSI
Trigger: TATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCC...GGTCTGTCTTGCCACTGTGGCTCCGTGCACCGGCACGGCCGCCGTGGTGACTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5
CDS TCA 90 bp GCTCCAGCGCCATGCTCCTACAGAGGGGGCGGTGAGGACATCACCTaGGACAGCCTTGCCACCTTTGCCCTGCGCTGGGACACCACTGGA +
Preference number: 5 (lower is better)
Translates to: APAPCSYRGGGEDIT*DSLATFALRWDTTG
Trigger: TCCAGTGGTGTCCCAGCGCAGGGCAAAGGTGGCAAGGCTGTCTCAGGTGATGTCCTCACCGCCCCCTCTGTAGGAGCATGGCGCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS TCA 90 bp CAGGAGAGCGTGGAGCCTGCTCCGGCTTGGGCTCGGAGTCTGAAATaGGAAACGGCAGAGGCGGATAGTACCCGCATGCCCCCACCGTGG +
Preference number: 5 (lower is better)
Translates to: QESVEPAPAWARSLK*ETAEADSTRMPPPW
Trigger: CCACGGTGGGGGCATGCGGGTACTATCCGCCTCTGCCGTTTCTCATTTCAGACTCCGAGCCCAAGCCGGAGCAGGCTCCACGCTCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523812.1
CDS CCA 90 bp CCGATCTCCACTTCCTCTACGTCTTGGAGATCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCTGGAGCCAGGGGAGCCTTCCGAGCGG +
Preference number: 5 (lower is better)
Translates to: PISTSSTSWRSRSDG*ESTLGLEPGEPSER
Trigger: CCGCTCGGAAGGCTCCCCTGGCTCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522479.1
CDS CCA 90 bp CCGATCTCCACTTCCTCTACGTCTTGGAGATCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCTGGAGCCAGGGGAGCCTGGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: PISTSSTSWRSRSDG*ESTLGLEPGEPGGQ
Trigger: CTGACCCCCAGGCTCCCCTGGCTCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522033.1
ENST00000523812.1
CDS-3UTR CAA 90 bp TTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGG +
Preference number: 5 (lower is better)
Translates to: LFRTRGMRCWAVPTVGDGHFLYV*EIQVGR
Trigger: CCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTG...CCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp CAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGCCCGGCCGCTGCTaGCTGCACGAGCGTCACGCG +
Preference number: 5 (lower is better)
Translates to: QKEFIPDTWHAVLGSAHRGPGRC*LHERHA
Trigger: CGCGTGACGCTCGTGCAGCAAGCAGCGGCCGGGCCC...ACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS GCA 90 bp GGAGCCTGGCACGCGCAGAGCTCTGGTCCCCCAGTAACCCGATTCTaGTCACTCACCGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTC +
Preference number: 5 (lower is better)
Translates to: GAWHAQSSGPPVTRF*SLTGPEGVSADLHF
Trigger: GAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGGTGAGTGAGCAGAATCGGGTTACTGGGGGACCAGAGCTCTGCGCGTGCCAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000523812.1
CDS CCA 90 bp GCTGGGGCTGGTCTTCCAAGTGGAGGTGAGGTGGCTGTACACGTCTaGGGACAGGCGGCAGGTGGGTGCTTTCCTGGCATGTTGATGCCC +
Preference number: 5 (lower is better)
Translates to: AGAGLPSGGEVAVHV*GQAAGGCFPGMLMP
Trigger: GGGCATCAACATGCCAGGAAAGCACCCACCTGCCGCCTGTCCCCAGACGTGTACAGCCACCTCACCTCCACTTGGAAGACCAGCCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS-3UTR CAA 90 bp CCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGTGCCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGG +
Preference number: 5 (lower is better)
Translates to: PYGHSSSWGCPRPRWQVCHFLYV*EIQVGR
Trigger: CCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTG...GCACACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS-3UTR CAA 90 bp TATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGGGGACGGGGAGCAGCGAGTTATACTaGAAACTCTTGCCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: YSGHVACGAGQCPPWGTGSSELY*KLLPQA
Trigger: GGCCTGCGGCAAGAGTTTCAAGTATAACTCGCTGCT...CCCCGTCCCCCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp TGGTCCATATGGGCACAGCTCCTCATGGGGCTGCCCCAGGCCTCGGTGGCAAGTGGCGCCTCAAAGCCCTaGCCGAGGATGTGGTCCATA +
Preference number: 5 (lower is better)
Translates to: WSIWAQLLMGLPQASVASGASKP*PRMWSI
Trigger: TATGGACCACATCCTCGGCAAGGGCTTTGAGGCGCC...ACTTGCCACCGAGGCCTGGGGCAGCCCCATGAGGAGCTGTGCCCATATGGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517468.5
ENST00000521682.5
CDS TCA 90 bp AAATACAGGGCAGGCTCCAGCGCCATGCTCCTACAGAGGGGGCGGTaGGGACATCACCTGAGACAGCCTTGCCACCTTTGCCCTGCGCTG +
Preference number: 5 (lower is better)
Translates to: KYRAGSSAMLLQRGR*GHHLRQPCHLCPAL
Trigger: CAGCGCAGGGCAAAGGTGGCAAGGCTGTCTCAGGTGATGTCCTCACCGCCCCCTCTGTAGGAGCATGGCGCTGGAGCCTGCCCTGTATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS CCA 90 bp CCGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PGQKVSLPISTSSTS*RSRSDGWESTLGLE
Trigger: CTCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344692.7
ENST00000517530.5
ENST00000523812.1
CDS CCA 90 bp TGTCACCATCCCCTGGCAGCCAGGGGAGCTGGCTTGTTCCACAGATaGCCAAATACAGGGCAGGCTCCAGCGCCATGCTCCTACAGAGGG +
Preference number: 5 (lower is better)
Translates to: CHHPLAARGAGLFHR*PNTGQAPAPCSYRG
Trigger: CCCTCTGTAGGAGCATGGCGCTGGAGCCTGCCCTGTATTTGGCCATCTGTGGAACAAGCCAGCTCCCCTGGCTGCCAGGGGATGGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS CCA 90 bp TCGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SGQKVSLPISTSSTS*RSRSDGWESTLGLE
Trigger: CTCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340042.2
ENST00000520021.5
ENST00000522033.1
ENST00000522479.1
ENST00000523522.5
CDS CCA 90 bp AGGACACCTCCTGGCCCTCCCAATCCCAACAGCAGGCCCGCTGCTTaGGCTTCTCTAGCCACGAATGCCCTTTACCTTCCTTCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RTPPGPPNPNSRPAA*ASLATNALYLPSQL
Trigger: GAGCTGGGAAGGAAGGTAAAGGGCATTCGTGGCTAGAGAAGCCCAAGCAGCGGGCCTGCTGTTGGGATTGGGAGGGCCAGGAGGTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS CCA 90 bp ACGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TGQKVSLPISTSSTS*RSRSDGWESTLGLE
Trigger: CTCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521682.5
CDS GCA 90 bp ACACAGGACACCTCCTGGCCCTCCCAATCCCAACAGCAGGCCCGCTaGTTGGGCTTCTCTAGCCACGAATGCCCTTTACCTTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: TQDTSWPSQSQQQAR*LGFSSHECPLPSFP
Trigger: TGGGAAGGAAGGTAAAGGGCATTCGTGGCTAGAGAAGCCCAAGCAGCGGGCCTGCTGTTGGGATTGGGAGGGCCAGGAGGTGTCCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS-3UTR CAA 90 bp GATGTGGGCGAGGGCTCAGCACTGTTAAATCCAGCCATATCACTAACATCGCCCGGGGTGGTGCCAGCATaGGGGGTGCCACAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: DVGEGSALLNPAISLTSPGVVPA*GVPQRW
Trigger: CCACCTCTGTGGCACCCCCAATGCTGGCACCACCCC...GGGCGATGTTAGTGATATGGCTGGATTTAACAGTGCTGAGCCCTCGCCCACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344692.7
CDS GCA 90 bp CCCAGTAACCCGATTCTGCTCACTCACCGGGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTACGTCTTGGAGATCCAGGTCGGACG +
Preference number: 5 (lower is better)
Translates to: PSNPILLTHRARRCL*RSPLPLRLGDPGRT
Trigger: CGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGGTGAGTGAGCAGAATCGGGTTACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000523812.1
CDS GCA 90 bp CAATCCCAACAGCAGGCCCGCTGCTTGGGCTTCTCTAGCCACGAATaGCCTTTACCTTCCTTCCCAGCTCGGTTCAAGAGCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: QSQQQARCLGFSSHE*PLPSFPARFKSLLL
Trigger: GAGGAGGAGGCTCTTGAACCGAGCTGGGAAGGAAGGTAAAGGGCATTCGTGGCTAGAGAAGCCCAAGCAGCGGGCCTGCTGTTGGGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS CCA 90 bp ACGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCATGTT +
Preference number: 5 (lower is better)
Translates to: TGQKVSLPISTSSTS*RSRSDGWESTLGHV
Trigger: AACATGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517468.5
CDS-3UTR CAA 90 bp AAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCCACCGTGGTTATACTTGAAACTCTaGCCGCAGGCCTCGCACCTG +
Preference number: 5 (lower is better)
Translates to: KRIYSGHVACGAGQCPPWLYLKL*PQASHL
Trigger: CAGGTGCGAGGCCTGCGGCAAGAGTTTCAAGTATAA...CCACGGTGGGCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS-3UTR CAA 90 bp CAACAATCAAAAAGAATTTATTCCGGACACGTGGCATGCGGTGCTGGGCAGTGCCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGG +
Preference number: 5 (lower is better)
Translates to: QQSKRIYSGHVACGAGQCHFLYV*EIQVGR
Trigger: CCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTG...GCACTGCCCAGCACCGCATGCCACGTGTCCGGAATAAATTCTTTTTGATTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340042.2
ENST00000523522.5
CDS GCA 72 bp GCCGCTCCGCGCTGGATTCAGGCCCGAAGCCGGCGCTaGACCGGGCCCTGCGGGGAAGGCTCCTCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: AAPRWIQARSRR*TGPCGEGSSGG
Trigger: GCCTCCTGAGGAGCCTTCCCCGCAGGGCCCGGTGCAGCGCCGGCTTCGGGCCTGAATCCAGCGCGGAGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340042.2
ENST00000522033.1
ENST00000522479.1
ENST00000523522.5
ENST00000523812.1
CDS CCA 72 bp CGCCCCCTCGTCAGGGGCCTGAGAGCCAGGAGAGCGTaGAGCCTGCTCCGGCTTGGGCTCGGAGTCGGGCCA +
Preference number: 6 (lower is better)
Translates to: RPLVRGLRARRA*SLLRLGLGVGP
Trigger: TGGCCCGACTCCGAGCCCAAGCCGGAGCAGGCTCCACGCTCTCCTGGCTCTCAGGCCCCTGACGAGGGGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340042.2
ENST00000522033.1
ENST00000522479.1
ENST00000523522.5
CDS GCA 72 bp AGGGAGGCTGGGGCTCACCTCCACCCTCTGGACCACTaGCTCCGCTCCTCTCTGACCGCCACGTGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: REAGAHLHPLDH*LRSSLTATCSR
Trigger: CCGGGAGCACGTGGCGGTCAGAGAGGAGCGGAGGCAGTGGTCCAGAGGGTGGAGGTGAGCCCCAGCCTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522033.1
ENST00000523812.1
CDS GCA 72 bp CTGGACCACTGCCTCCGCTCCTCTCTGACCGCCACGTaGTCCCGGGCTGTGGCCCTGACACAGGACACCTCC +
Preference number: 6 (lower is better)
Translates to: LDHCLRSSLTAT*SRAVALTQDTS
Trigger: GGAGGTGTCCTGTGTCAGGGCCACAGCCCGGGAGCACGTGGCGGTCAGAGAGGAGCGGAGGCAGTGGTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS CCA 72 bp GCCCTGCTGGGGCTGGTCTTCCAAGTGGAGGTGAGGTaGCTGTACACGTCTGGGGACAGGCGGCAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: ALLGLVFQVEVR*LYTSGDRRQVG
Trigger: ACCCACCTGCCGCCTGTCCCCAGACGTGTACAGCCACCTCACCTCCACTTGGAAGACCAGCCCCAGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS CCA 72 bp CAGCCTTGCCACCTTTGCCCTGCGCTGGGACACCACTaGAGAGGACCTGGCAGCCCTGCTGGGGCTGGTCTT +
Preference number: 6 (lower is better)
Translates to: QPCHLCPALGHH*RGPGSPAGAGL
Trigger: AAGACCAGCCCCAGCAGGGCTGCCAGGTCCTCTCCAGTGGTGTCCCAGCGCAGGGCAAAGGTGGCAAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS CAA 90 bp ACAGAGGGGGCGGTGAGGACATCACCTGAGACAGCCTTGCCACCTTaGCCCTGCGCTGGGACACCACTGGAGAGGACCTGGCAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: TEGAVRTSPETALPP*PCAGTPLERTWQPC
Trigger: GCAGGGCTGCCAGGTCCTCTCCAGTGGTGTCCCAGCGCAGGGCAAAGGTGGCAAGGCTGTCTCAGGTGATGTCCTCACCGCCCCCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS GCA 72 bp CCGGCGCTGCACCGGGCCCGGGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTACGTCTTGGAGATCCA +
Preference number: 6 (lower is better)
Translates to: PALHRARARRCL*RSPLPLRLGDP
Trigger: TGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGGGCCCGGTGCAGCGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS CCA 72 bp CCCCTGGCAGCCAGGGGAGCTGGCTTGTTCCACAGATaGCCAAATACAGGGCAGGCTCCAGCGCCATGCTCC +
Preference number: 6 (lower is better)
Translates to: PLAARGAGLFHR*PNTGQAPAPCS
Trigger: GGAGCATGGCGCTGGAGCCTGCCCTGTATTTGGCCATCTGTGGAACAAGCCAGCTCCCCTGGCTGCCAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS TCA 72 bp CCATGCTCCTACAGAGGGGGCGGTGAGGACATCACCTaGGACAGCCTTGCCACCTTTGCCCTGCGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: PCSYRGGGEDIT*DSLATFALRWD
Trigger: GTCCCAGCGCAGGGCAAAGGTGGCAAGGCTGTCTCAGGTGATGTCCTCACCGCCCCCTCTGTAGGAGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS TCA 72 bp GCAGGCTCCAGCGCCATGCTCCTACAGAGGGGGCGGTaGGGACATCACCTGAGACAGCCTTGCCACCTTTGC +
Preference number: 6 (lower is better)
Translates to: AGSSAMLLQRGR*GHHLRQPCHLC
Trigger: GCAAAGGTGGCAAGGCTGTCTCAGGTGATGTCCTCACCGCCCCCTCTGTAGGAGCATGGCGCTGGAGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS GCA 72 bp AGGACATCACCTGAGACAGCCTTGCCACCTTTGCCCTaGGCTGGGACACCACTGGAGAGGACCTGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: RTSPETALPPLP*AGTPLERTWQP
Trigger: GGGCTGCCAGGTCCTCTCCAGTGGTGTCCCAGCGCAGGGCAAAGGTGGCAAGGCTGTCTCAGGTGATGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS CCA 72 bp GTGGGCATTGTGAGGAGCCTGGCACGCGCAGAGCTCTaGTCCCCCAGTAACCCGATTCTGCTCACTCACCGG +
Preference number: 6 (lower is better)
Translates to: VGIVRSLARAEL*SPSNPILLTHR
Trigger: CCGGTGAGTGAGCAGAATCGGGTTACTGGGGGACCAGAGCTCTGCGCGTGCCAGGCTCCTCACAATGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000523812.1
CDS CAA 72 bp GCGGTGAGGACATCACCTGAGACAGCCTTGCCACCTTaGCCCTGCGCTGGGACACCACTGGAGAGGACCTGG +
Preference number: 6 (lower is better)
Translates to: AVRTSPETALPP*PCAGTPLERTW
Trigger: CCAGGTCCTCTCCAGTGGTGTCCCAGCGCAGGGCAAAGGTGGCAAGGCTGTCTCAGGTGATGTCCTCACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS CAA 90 bp CCCGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: PGPEGVSADLHFLYV*EIQVGRLGEHLRAG
Trigger: TCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517530.5
CDS TCA 72 bp GTGGAGCCTGCTCCGGCTTGGGCTCGGAGTCTGAAATaGGAAACGGCAGAGGCGGATAGTACCCGCATGCCC +
Preference number: 6 (lower is better)
Translates to: VEPAPAWARSLK*ETAEADSTRMP
Trigger: GGGCATGCGGGTACTATCCGCCTCTGCCGTTTCTCATTTCAGACTCCGAGCCCAAGCCGGAGCAGGCTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523812.1
CDS GCA 72 bp CACGCGCAGAGCTCTGGTCCCCCAGTAACCCGATTCTaGTCACTCACCGGGCCAGAAGGTGTCTCTGCCGAT +
Preference number: 6 (lower is better)
Translates to: HAQSSGPPVTRF*SLTGPEGVSAD
Trigger: ATCGGCAGAGACACCTTCTGGCCCGGTGAGTGAGCAGAATCGGGTTACTGGGGGACCAGAGCTCTGCGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000523812.1
CDS CCA 72 bp ACTTCCTCTACGTCTTGGAGATCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCTGGAGCCAGGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: TSSTSWRSRSDG*ESTLGLEPGEP
Trigger: TGGCTCCCCTGGCTCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340042.2
ENST00000344692.7
ENST00000517530.5
ENST00000520021.5
ENST00000521682.5
ENST00000523522.5
CDS CCA 72 bp GGTCTTCCAAGTGGAGGTGAGGTGGCTGTACACGTCTaGGGACAGGCGGCAGGTGGGTGCTTTCCTGGCATG +
Preference number: 6 (lower is better)
Translates to: GLPSGGEVAVHV*GQAAGGCFPGM
Trigger: CATGCCAGGAAAGCACCCACCTGCCGCCTGTCCCCAGACGTGTACAGCCACCTCACCTCCACTTGGAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS CCA 72 bp GGCACCATGTCACCATCCCCTGGCAGCCAGGGGAGCTaGCTTGTTCCACAGATGGCCAAATACAGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: GTMSPSPGSQGS*LVPQMAKYRAG
Trigger: GCCTGCCCTGTATTTGGCCATCTGTGGAACAAGCCAGCTCCCCTGGCTGCCAGGGGATGGTGACATGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS CCA 72 bp ACTTCCTCTACGTCTTGGAGATCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCTGGAGCCAGGGGAGCCT +
Preference number: 6 (lower is better)
Translates to: TSSTSWRSRSDG*ESTLGLEPGEP
Trigger: AGGCTCCCCTGGCTCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522033.1
ENST00000522479.1
ENST00000523812.1
CDS CAA 90 bp GTCGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: VGPEGVSADLHFLYV*EIQVGRLGEHLRAG
Trigger: TCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340042.2
ENST00000522033.1
ENST00000522479.1
ENST00000523522.5
CDS CAA 90 bp ACCGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: TGPEGVSADLHFLYV*EIQVGRLGEHLRAG
Trigger: TCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000523812.1
CDS CAA 90 bp CAGGACACCTCCTGGCCCTCCCAATCCCAACAGCAGGCCCGCTGCTaGGGCTTCTCTAGCCACGAATGCCCTTTACCTTCCTTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: QDTSWPSQSQQQARC*GFSSHECPLPSFPA
Trigger: AGCTGGGAAGGAAGGTAAAGGGCATTCGTGGCTAGAGAAGCCCAAGCAGCGGGCCTGCTGTTGGGATTGGGAGGGCCAGGAGGTGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS CAA 90 bp GACGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: DGPEGVSADLHFLYV*EIQVGRLGEHLRAG
Trigger: TCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521682.5
CDS TCA 72 bp AGAGCGTGGAGCCTGCTCCGGCTTGGGCTCGGAGTCTaGAATGAGAAACGGCAGAGGCGGATAGTACCCGCA +
Preference number: 6 (lower is better)
Translates to: RAWSLLRLGLGV*NEKRQRRIVPA
Trigger: TGCGGGTACTATCCGCCTCTGCCGTTTCTCATTTCAGACTCCGAGCCCAAGCCGGAGCAGGCTCCACGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523812.1
CDS GCA 72 bp CCGGCTTGGGCTCGGAGTCGGGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTACGTCTTGGAGATCCA +
Preference number: 6 (lower is better)
Translates to: PAWARSRARRCL*RSPLPLRLGDP
Trigger: TGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGACTCCGAGCCCAAGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340042.2
ENST00000522033.1
ENST00000522479.1
ENST00000523522.5
CDS GCA 72 bp CCTTCCTCGAGAGCCGAGGGTCCAGAACTGCTTGGCTaGCCCAAAGCAGGATGTGGGGGTCCCAAACCATCT +
Preference number: 6 (lower is better)
Translates to: PSSRAEGPELLG*PKAGCGGPKPS
Trigger: AGATGGTTTGGGACCCCCACATCCTGCTTTGGGGCAGCCAAGCAGTTCTGGACCCTCGGCTCTCGAGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS GCA 72 bp ACCTCCTGGCCCTCCCAATCCCAACAGCAGGCCCGCTaGTTGGGCTTCTCTAGCCACGAATGCCCTTTACCT +
Preference number: 6 (lower is better)
Translates to: TSWPSQSQQQAR*LGFSSHECPLP
Trigger: AGGTAAAGGGCATTCGTGGCTAGAGAAGCCCAAGCAGCGGGCCTGCTGTTGGGATTGGGAGGGCCAGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS CCA 72 bp CCTGGCCCTCCCAATCCCAACAGCAGGCCCGCTGCTTaGGCTTCTCTAGCCACGAATGCCCTTTACCTTCCT +
Preference number: 6 (lower is better)
Translates to: PGPPNPNSRPAA*ASLATNALYLP
Trigger: AGGAAGGTAAAGGGCATTCGTGGCTAGAGAAGCCCAAGCAGCGGGCCTGCTGTTGGGATTGGGAGGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS CAA 72 bp TCCTGGCCCTCCCAATCCCAACAGCAGGCCCGCTGCTaGGGCTTCTCTAGCCACGAATGCCCTTTACCTTCC +
Preference number: 6 (lower is better)
Translates to: SWPSQSQQQARC*GFSSHECPLPS
Trigger: GGAAGGTAAAGGGCATTCGTGGCTAGAGAAGCCCAAGCAGCGGGCCTGCTGTTGGGATTGGGAGGGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS CAA 90 bp GACGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCATGT +
Preference number: 6 (lower is better)
Translates to: DGPEGVSADLHFLYV*EIQVGRLGEHLRAC
Trigger: ACATGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517468.5
CDS CAA 90 bp ATCGGGCCAGAAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTaGGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: IGPEGVSADLHFLYV*EIQVGRLGEHLRAG
Trigger: TCCAGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520021.5
CDS GCA 72 bp AGGCTGAGGGGAGGCCATCGGGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTACGTCTTGGAGATCCA +
Preference number: 6 (lower is better)
Translates to: RLRGGHRARRCL*RSPLPLRLGDP
Trigger: TGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGATGGCCTCCCCTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520021.5
CDS GCA 72 bp CAGCAGGCCCGCTGCTTGGGCTTCTCTAGCCACGAATaGCCTTTACCTTCCTTCCCAGCTCGGTTCAAGAGC +
Preference number: 6 (lower is better)
Translates to: QQARCLGFSSHE*PLPSFPARFKS
Trigger: GCTCTTGAACCGAGCTGGGAAGGAAGGTAAAGGGCATTCGTGGCTAGAGAAGCCCAAGCAGCGGGCCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522033.1
CDS CCA 72 bp AACCATCTTTGGGTCTTTCGGATACCCTCCCCATTGTaGAGACAGGCCTGGGGGCACCATGTCACCATCCCC +
Preference number: 6 (lower is better)
Translates to: NHLWVFRIPSPL*RQAWGHHVTIP
Trigger: GGGGATGGTGACATGGTGCCCCCAGGCCTGTCTCCACAATGGGGAGGGTATCCGAAAGACCCAAAGATGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS GCA 72 bp CCGATTCTGCTCACTCACCGGGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTACGTCTTGGAGATCCA +
Preference number: 6 (lower is better)
Translates to: PILLTHRARRCL*RSPLPLRLGDP
Trigger: TGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGGTGAGTGAGCAGAATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344692.7
ENST00000523812.1
CDS CCA 72 bp AAGGTGTCTCTGCCGATCTCCACTTCCTCTACGTCTTaGAGATCCAGGTCGGACGGCTGGGAGAGCACCTTA +
Preference number: 6 (lower is better)
Translates to: KVSLPISTSSTS*RSRSDGWESTL
Trigger: TAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000340042.2
ENST00000344692.7
ENST00000517468.5
ENST00000517530.5
ENST00000520021.5
ENST00000521682.5
ENST00000522033.1
ENST00000522479.1
ENST00000523522.5
ENST00000523812.1
CDS CCA 72 bp ACTTCCTCTACGTCTTGGAGATCCAGGTCGGACGGCTaGGAGAGCACCTTAGGGCATGTTGATGCCCATGGA +
Preference number: 6 (lower is better)
Translates to: TSSTSWRSRSDG*ESTLGHVDAHG
Trigger: TCCATGGGCATCAACATGCCCTAAGGTGCTCTCCCAGCCGTCCGACCTGGATCTCCAAGACGTAGAGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517468.5
CDS CCA 72 bp GGGTCCAGAACTGCTTGGCTGCCCCAAAGCAGGATGTaGGGGTCCCAAACCATCTTTGGGTCTTTCGGATAC +
Preference number: 6 (lower is better)
Translates to: GSRTAWLPQSRM*GSQTIFGSFGY
Trigger: GTATCCGAAAGACCCAAAGATGGTTTGGGACCCCCACATCCTGCTTTGGGGCAGCCAAGCAGTTCTGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519876.1
CDS GCA 72 bp GAAGCATCAGTAACTGGACGGGCCAGAAGGTGTCTCTaGCGATCTCCACTTCCTCTACGTCTTGGAGATCCA +
Preference number: 6 (lower is better)
Translates to: EASVTGRARRCL*RSPLPLRLGDP
Trigger: TGGATCTCCAAGACGTAGAGGAAGTGGAGATCGGCAGAGACACCTTCTGGCCCGTCCAGTTACTGATGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517468.5
ENST00000521682.5