RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLI3 (Homo sapiens)

Ensembl gene IDs: ENSG00000106571

Ensembl transcript IDs: ENST00000395925.8, ENST00000428534.2, ENST00000437480.1, ENST00000479210.1, ENST00000642432.1, ENST00000643264.1, ENST00000647255.1, ENST00000677288.1, ENST00000677605.1, ENST00000677990.1, ENST00000678429.1, ENST00000678978.1

Found 1822 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTTCATCTGTGGCTGGGCTGCAGCCCCTGGGCTTGAGGTGGGCGTaGTCACGGGGAATGCAGGCTTGTCCGAGGAACGCCTGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: SSSVAGLQPLGLRWA*SRGMQACPRNAWAS
Trigger: ACTGGCCCAGGCGTTCCTCGGACAAGCCTGCATTCCCCGTGATCACGCCCACCTCAAGCCCAGGGGCTGCAGCCCAGCCACAGATGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR GCA 90 bp ACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTaGACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTC +
Preference number: 1 (lower is better)
Translates to: TRQPRLCYHRALSGW*THSLGVLIGQHQLV
Trigger: GACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 90 bp CCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTaGCTGGTGCACACACAGCCTTGGAGTGCTGATTGGGCAACACCA +
Preference number: 1 (lower is better)
Translates to: PGYKTASTLLPPCAL*LVHTQPWSADWATP
Trigger: TGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 90 bp GATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTaGTGCACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTG +
Preference number: 1 (lower is better)
Translates to: DTRQPRLCYHRALSG*CTHSLGVLIGQHQL
Trigger: CAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR GCA 90 bp CACATGAAACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTaGGCTCTCTGGCTGGTGCACACACAGCCTTGGAGTGCTGATTGG +
Preference number: 1 (lower is better)
Translates to: HMKPGYKTASTLLPP*ALWLVHTQPWSADW
Trigger: CCAATCAGCACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTTTCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR GCA 90 bp TCAACCACCAGCCAGCACACGAATAGTGTCCCAACTTGGAAATCCTaGACCCCACGAGCTCTAAACCCAGACAGGGCCAGGTCCAAAGCC +
Preference number: 1 (lower is better)
Translates to: STTSQHTNSVPTWKS*TPRALNPDRARSKA
Trigger: GGCTTTGGACCTGGCCCTGTCTGGGTTTAGAGCTCGTGGGGTGCAGGATTTCCAAGTTGGGACACTATTCGTGTGCTGGCTGGTGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR CCA 90 bp ATGGCGATGTCAACCACCAGCCAGCACACGAATAGTGTCCCAACTTaGAAATCCTGCACCCCACGAGCTCTAAACCCAGACAGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: MAMSTTSQHTNSVPT*KSCTPRALNPDRAR
Trigger: CCTGGCCCTGTCTGGGTTTAGAGCTCGTGGGGTGCAGGATTTCCAAGTTGGGACACTATTCGTGTGCTGGCTGGTGGTTGACATCGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR TCA 90 bp ACCACCGTGCGCTCTCTGGCTGGTGCACACACAGCCTTGGAGTGCTaGTTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACA +
Preference number: 1 (lower is better)
Translates to: TTVRSLAGAHTALEC*LGNTNWSLSLTRLT
Trigger: TGTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGCACGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 90 bp ACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTaGATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACT +
Preference number: 1 (lower is better)
Translates to: TNCPSLLSNCSAKQH*MFMKVVGGEANVIT
Trigger: AGTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 90 bp AACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACACATaGAACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCG +
Preference number: 1 (lower is better)
Translates to: NLSEENILLSVQNNT*NQDTRQPRLCYHRA
Trigger: CGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTTTCATGTGTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 90 bp TACCATCTATCTAACTTCTTACCAGAACAGATAAAAGTAGCAATGTaGCTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGT +
Preference number: 1 (lower is better)
Translates to: YHLSNFLPEQIKVAM*LSVTNCPSLLSNCS
Trigger: ACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAGCCACATTGCTACTTTTATCTGTTCTGGTAAGAAGTTAGATAGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 90 bp CATCTAGTTGAAAGCAAACCTAATAGTCTTAGCCAAAGTCCCCAGTaGCAAATCAACCTCCATGCGGAGATTCTTGGTCCAAATGAAAGA +
Preference number: 1 (lower is better)
Translates to: HLVESKPNSLSQSPQ*QINLHAEILGPNER
Trigger: TCTTTCATTTGGACCAAGAATCTCCGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCTAAGACTATTAGGTTTGCTTTCAACTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 90 bp GAGCCTCTACTTTCCTATGCTCAGATCAGTAGTTCTCTTTTGTTATaGGGCTGTTCCAAAGGAGACACATCCGTTAATTTCAAAGAAGAC +
Preference number: 1 (lower is better)
Translates to: EPLLSYAQISSSLLL*GCSKGDTSVNFKED
Trigger: GTCTTCTTTGAAATTAACGGATGTGTCTCCTTTGGAACAGCCCCATAACAAAAGAGAACTACTGATCTGAGCATAGGAAAGTAGAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 90 bp TTATGCCTTGTTTCAGAAACACAGAGAAAGTCTTGCTTTTTCAACTaGAAAGTGGTAGAGCCTCTACTTTCCTATGCTCAGATCAGTAGT +
Preference number: 1 (lower is better)
Translates to: LCLVSETQRKSCFFN*KVVEPLLSYAQISS
Trigger: ACTACTGATCTGAGCATAGGAAAGTAGAGGCTCTACCACTTTTCAGTTGAAAAAGCAAGACTTTCTCTGTGTTTCTGAAACAAGGCATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 90 bp AGATTTGGAGATTTGTGGAAAAGTGAGACTGGATCTCTGATTCTGTaGCAACATTATGCCTTGTTTCAGAAACACAGAGAAAGTCTTGCT +
Preference number: 1 (lower is better)
Translates to: RFGDLWKSETGSLIL*QHYALFQKHRESLA
Trigger: AGCAAGACTTTCTCTGTGTTTCTGAAACAAGGCATAATGTTGTCACAGAATCAGAGATCCAGTCTCACTTTTCCACAAATCTCCAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 90 bp AGAATGGAAATCCTCCCTCACTATAGTGGAATTAATAAATGTTACTaGTACAGCCGCTTGTGGGGTTGTTTAAATACCTATATACTTAGA +
Preference number: 1 (lower is better)
Translates to: RMEILPHYSGINKCY*YSRLWGCLNTYILR
Trigger: TCTAAGTATATAGGTATTTAAACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAGGGAGGATTTCCATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CAA 90 bp GCAGCCCCTGGGCTTGAGGTGGGCGTGATCACGGGGAATGCAGGCTaGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCT +
Preference number: 2 (lower is better)
Translates to: AAPGLEVGVITGNAG*SEERLGQSHLNAMP
Trigger: AGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCCTGCATTCCCCGTGATCACGCCCACCTCAAGCCCAGGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGACAGCCTTGGAGTGCTaGTTGGGCAACACCAACTGG +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWTALEC*LGNTNW
Trigger: CCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAACTCTGCTACCACCGTaGGCTCTCTGGCTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTITLLPP*ALWLVH
Trigger: GTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TGGATGGACAGAAGGATGGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACAGAAGAAAGGGCCTCTaGGCTTCCAGCAATCCACGC +
Preference number: 2 (lower is better)
Translates to: WMDRRMEGHGDVNHQPAHRRKGL*ASSNPR
Trigger: GCGTGGATTGCTGGAAGCGCAGAGGCCCTTTCTTCT...GTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCCATCCTTCTGTCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR-3UTR TCA 90 bp TGGACAGAAGGATGGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACGAATTGCAGAGGCAGCAGGTaGCCAGGTTGCAGAAGAAAG +
Preference number: 2 (lower is better)
Translates to: WTEGWRAMAMSTTSQHTNCRGSR*PGCRRK
Trigger: CTTTCTTCTGCAACCTGGTCACCTGCTGCCTCTGCA...ATTCGTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCCATCCTTCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGCCAAAGTCCCCAGTaGCAAATCAACCTCCATGCG +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWSQSPQ*QINLHA
Trigger: CGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATGGAGGAGGTCAGCATaGTCCCTTCCACCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIWRRSA*SLPPKL
Trigger: GAGCTTGGGTGGAAGGGACCATGCTGACCTCCTCCA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGACAACAACAGTGGTaGGCCGGATCACTGTGCATC +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRQQQW*AGSLCI
Trigger: GATGCACAGTGATCCGGCCCACCACTGTTGTTGTCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACACTGGAAGAGCCCTCTaGTGGAGGAGGTCAGCATGG +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDTGRAL*WRRSAW
Trigger: CCATGCTGACCTCCTCCATCAGAGGGCTCTTCCAGT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TGGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACGAATAGTGTCCCAACTACACACCAGTCCCTGTaGTCAAGACTGAGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: WRAMAMSTTSQHTNSVPTTHQSL*SRLSAE
Trigger: CTCTGCACTCAGTCTTGATCACAGGGACTGGTGTGT...AGTTGGGACACTATTCGTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGGAGGAGGTCAGCATaGTCCCTTCCACCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDWRRSA*SLPPKL
Trigger: GAGCTTGGGTGGAAGGGACCATGCTGACCTCCTCCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGGGCCGGATCACTGTaGATCCCTCCAGGAAGGACA +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILWAGSL*IPPGRT
Trigger: TGTCCTTCCTGGAGGGATGCACAGTGATCCGGCCCA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGGAGGAGGTCAGCATaGTCCCTTCCACCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILWRRSA*SLPPKL
Trigger: GAGCTTGGGTGGAAGGGACCATGCTGACCTCCTCCA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGATCCGAGAATACTACTaGAAGAGCCCTCTGATGGAG +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWIREYY*KSPLME
Trigger: CTCCATCAGAGGGCTCTTCCAGTAGTATTCTCGGAT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAACAAGACAACAACAGTaGTGGGCCGGATCACTGTGC +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTITRQQQ*WAGSLC
Trigger: GCACAGTGATCCGGCCCACCACTGTTGTTGTCTTGT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCTCTTCAACTCCTATTaGTTTCCGTTGGTTGCAGTC +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWLFNSY*FPLVAV
Trigger: GACTGCAACCAACGGAAATCAATAGGAGTTGAAGAG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCAAATCAACCTCCATaGGGAGATTCTTGGTCCAAA +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWANQPP*GDSWSK
Trigger: TTTGGACCAAGAATCTCCGCATGGAGGTTGATTTGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTCTCAAGATATGAGATaGCTAGCCTACAGAGATCCC +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWSQDMR*LAYRDP
Trigger: GGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGAGAACAGCAGGCATaGAAGGGGAATTGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGEQQA*KGNCSV
Trigger: GACACTGCAATTCCCCTTCCATGCCTGCTGTTCTCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCACACTTACAGACATaGAGAGCTGAAAACCAAAAC +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWAHLQT*RAENQN
Trigger: GTTTTGGTTTTCAGCTCTTCATGTCTGTAAGTGTGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGCAAATGTGATAACTaGGAATCGACCATACAGACA +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGKCDN*ESTIQT
Trigger: TGTCTGTATGGTCGATTCTCAGTTATCACATTTGCC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCTTGGAGGCTGGGGGTaGGTCTCAAGATATGAGATG +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILLGGWG*VSRYEM
Trigger: CATCTCATATCTTGAGACTCACCCCCAGCCTCCAAG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTGGGCCGGATCACTGTaGATCCCTCCAGGAAGGACA +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINWAGSL*IPPGRT
Trigger: TGTCCTTCCTGGAGGGATGCACAGTGATCCGGCCCA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAATCCGAGAATACTACTaGAAGAGCCCTCTGATGGAG +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIIREYY*KSPLME
Trigger: CTCCATCAGAGGGCTCTTCCAGTAGTATTCTCGGAT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGTGCACACACAGCCTTaGAGTGCTGATTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILVHTQP*SADWAT
Trigger: TGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCAC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAACTGTGGAATGCCCTaGACTGAATTGGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILNCGMP*TELEMG
Trigger: CCCCATCTCCAATTCAGTTCAGGGCATTCCACAGTT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAGTGCGAAACAGCACTaGATGTTCATGAAGGTAGTG +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISAKQH*MFMKVV
Trigger: CACTACCTTCATGAACATTCAGTGCTGTTTCGCACT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATCAATAGACAGGGTGTaGAAAAAGGCATCCACACAG +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISIDRV*KKASTQ
Trigger: CTGTGTGGATGCCTTTTTTCACACCCTGTCTATTGA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGATTTGTGGAAAAGTaGGACTGGATCTCTGATTCT +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRFVEK*DWISDS
Trigger: AGAATCAGAGATCCAGTCTCACTTTTCCACAAATCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGAACTGAATTGGAGATaGGGGGAACATCAATATTCT +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWELNWR*GEHQYS
Trigger: AGAATATTGATGTTCCCCCCATCTCCAATTCAGTTC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGATAAAAGTAGCAATGTaGCTGAGTGTCACCAACTGT +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWIKVAM*LSVTNC
Trigger: ACAGTTGGTGACACTCAGCCACATTGCTACTTTTAT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATGTATCAAATGCACGTaGGGAGTAGCTGCACTTCAA +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTICIKCT*GVAALQ
Trigger: TTGAAGTGCAGCTACTCCCCACGTGCATTTGATACA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACATCCGAGAATACTACTaGAAGAGCCCTCTGATGGAG +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDIREYY*KSPLME
Trigger: CTCCATCAGAGGGCTCTTCCAGTAGTATTCTCGGAT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAGACCTTCCTTCCACTaGACTGCCACAACAGATCAC +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRPSFH*TATTDH
Trigger: GTGATCTGTTGTGGCAGTCCAGTGGAAGGAAGGTCT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGCAAATGTGATAACTaGGAATCGACCATACAGACA +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGKCDN*ESTIQT
Trigger: TGTCTGTATGGTCGATTCTCAGTTATCACATTTGCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGTGCGAAACAGCACTaGATGTTCATGAAGGTAGTG +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSAKQH*MFMKVV
Trigger: CACTACCTTCATGAACATTCAGTGCTGTTTCGCACT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGTGAGACTGGATCTCTaGTTCTGTGACAACATTATG +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIVRLDL*FCDNIM
Trigger: CATAATGTTGTCACAGAATCAGAGATCCAGTCTCAC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGAGTTGGAAAGGGATTaGACCAAACCATTAGAGCAC +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDELERD*TKPLEH
Trigger: GTGCTCTAATGGTTTGGTTCAATCCCTTTCCAACTC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTCAGGCCCCATGCTTTaGAAACAAGAGTTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILSGPML*KQELER
Trigger: CCTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGCCAAACATTGAGCTaGAACTTGCATCTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSQTLS*NLHLLQ
Trigger: TTGCAGGAGATGCAAGTTTCAGCTCAATGTTTGGCT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp AAATCAGTGTGCCCAGATAGGCAGTGTCCAGGAACGAGGAAAACGGGCCAGCTCACTCCATGCTTGAACTaGAATGCCTCTCAACACTTT +
Preference number: 2 (lower is better)
Translates to: KSVCPDRQCPGTRKTGQLTPCLN*NASQHF
Trigger: AAAGTGTTGAGAGGCATTTCAGTTCAAGCATGGAGT...GAGCTGGCCCGTTTTCCTCGTTCCTGGACACTGCCTATCTGGGCACACTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTCCATGTACTCTTTGTaGACACACAGTATGACTTTT +
Preference number: 2 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWSMYSL*THSMTF
Trigger: AAAAGTCATACTGTGTGTGCACAAAGAGTACATGGA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACATTGCAGTGTCCCTCTaGTTGTCTCAGGAACATCTA +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDIAVSL*LSQEHL
Trigger: TAGATGTTCCTGAGACAAGCAGAGGGACACTGCAAT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTTCCTTCCACTGGACTaGCACAACAGATCACTGAAA +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDFLPLD*HNRSLK
Trigger: TTTCAGTGATCTGTTGTGGCAGTCCAGTGGAAGGAA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAGCCAAAGTCCCCAGTaGCAAATCAACCTCCATGCG +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSQSPQ*QINLHA
Trigger: CGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGGAGAACAGCAGGCATaGAAGGGGAATTGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINGEQQA*KGNCSV
Trigger: GACACTGCAATTCCCCTTCCATGCCTGCTGTTCTCC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACACAAGACAACAACAGTaGTGGGCCGGATCACTGTGC +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINTRQQQ*WAGSLC
Trigger: GCACAGTGATCCGGCCCACCACTGTTGTTGTCTTGT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CAA 90 bp GGGGAGAACAGCAGGCATGGAAGGGGAATTGCAGTGTCCCTCTGCTaGTCTCAGGAACATCTAGTTGAAAGCAAACCTAATAGTCTTAGC +
Preference number: 2 (lower is better)
Translates to: GENSRHGRGIAVSLC*SQEHLVESKPNSLS
Trigger: GCTAAGACTATTAGGTTTGCTTTCAACTAGATGTTCCTGAGACAAGCAGAGGGACACTGCAATTCCCCTTCCATGCCTGCTGTTCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAACTGTGGAATGCCCTaGACTGAATTGGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINNCGMP*TELEMG
Trigger: CCCCATCTCCAATTCAGTTCAGGGCATTCCACAGTT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAATTAATAAATGTTACTaGTACAGCCGCTTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIINKCY*YSRLWG
Trigger: ACCCCACAAGCGGCTGTATCAGTAACATTTATTAAT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTCAATAGACAGGGTGTaGAAAAAGGCATCCACACAG +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILSIDRV*KKASTQ
Trigger: CTGTGTGGATGCCTTTTTTCACACCCTGTCTATTGA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGATCTCTGATTCTGTaGCAACATTATGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGSLIL*QHYALF
Trigger: AAACAAGGCATAATGTTGTCACAGAATCAGAGATCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGTGAGACTGGATCTCTaGTTCTGTGACAACATTATG +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDVRLDL*FCDNIM
Trigger: CATAATGTTGTCACAGAATCAGAGATCCAGTCTCAC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAGATTTGTGGAAAAGTaGGACTGGATCTCTGATTCT +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIRFVEK*DWISDS
Trigger: AGAATCAGAGATCCAGTCTCACTTTTCCACAAATCT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAACTGGAAGAGCCCTCTaGTGGAGGAGGTCAGCATGG +
Preference number: 2 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKTGRAL*WRRSAW
Trigger: CCATGCTGACCTCCTCCATCAGAGGGCTCTTCCAGT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAGCCAAACATTGAGCTaGAACTTGCATCTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILSQTLS*NLHLLQ
Trigger: TTGCAGGAGATGCAAGTTTCAGCTCAATGTTTGGCT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCAAATCAACCTCCATaGGGAGATTCTTGGTCCAAA +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILANQPP*GDSWSK
Trigger: TTTGGACCAAGAATCTCCGCATGGAGGTTGATTTGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGTATCAAATGCACGTaGGGAGTAGCTGCACTTCAA +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILCIKCT*GVAALQ
Trigger: TTGAAGTGCAGCTACTCCCCACGTGCATTTGATACA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp ATCCATATGATTCTGTTTTCCTTTCTACGAATAGCGTCAGTGCAGGGGTCCAAGGGATGGACAGAAGGATaGAGGGCCATGGCGATGTCA +
Preference number: 2 (lower is better)
Translates to: IHMILFSFLRIASVQGSKGWTEG*RAMAMS
Trigger: TGACATCGCCATGGCCCTCCATCCTTCTGTCCATCC...CTTGGACCCCTGCACTGACGCTATTCGTAGAAAGGAAAACAGAATCATATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAATACAGCAGGTAGCCTaGGGTGTTAATATTTTAACA +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIIQQVA*GVNILT
Trigger: TGTTAAAATATTAACACCTCAGGCTACCTGCTGTAT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGAACTGAATTGGAGATaGGGGGAACATCAATATTCT +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDELNWR*GEHQYS
Trigger: AGAATATTGATGTTCCCCCCATCTCCAATTCAGTTC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAGATTTGGAGATTTGTaGAAAAGTGAGACTGGATCT +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIRFGDL*KSETGS
Trigger: AGATCCAGTCTCACTTTTCCACAAATCTCCAAATCT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACATCCGAGAATACTACTaGAAGAGCCCTCTGATGGAG +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINIREYY*KSPLME
Trigger: CTCCATCAGAGGGCTCTTCCAGTAGTATTCTCGGAT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCTCTTCAACTCCTATTaGTTTCCGTTGGTTGCAGTC +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINLFNSY*FPLVAV
Trigger: GACTGCAACCAACGGAAATCAATAGGAGTTGAAGAG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAACTGTGGAATGCCCTaGACTGAATTGGAGATGGGG +
Preference number: 2 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVNCGMP*TELEMG
Trigger: CCCCATCTCCAATTCAGTTCAGGGCATTCCACAGTT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACATACAGCAGGTAGCCTaGGGTGTTAATATTTTAACA +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDIQQVA*GVNILT
Trigger: TGTTAAAATATTAACACCTCAGGCTACCTGCTGTAT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAGATTTGTGGAAAAGTaGGACTGGATCTCTGATTCT +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRFVEK*DWISDS
Trigger: AGAATCAGAGATCCAGTCTCACTTTTCCACAAATCT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TCCTTCCCTACCCAGTACAGTCAGCAAAGCACACTCATGAAACCGGGTGAAGAAAGCAGGGACAGGAAGTaGAGGTTACCATTAACATAT +
Preference number: 2 (lower is better)
Translates to: SFPTQYSQQSTLMKPGEESRDRK*RLPLTY
Trigger: ATATGTTAATGGTAACCTTCACTTCCTGTCCCTGCT...TTCTTCACCCGGTTTCATGAGTGTGCTTTGCTGACTGTACTGGGTAGGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTAATTCTACCCAATTaGTTCAATCTACCATCTATC +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTILILPN*FNLPSI
Trigger: GATAGATGGTAGATTGAAGCAATTGGGTAGAATTAG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTTCCTTCCACTGGACTaGCACAACAGATCACTGAAA +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINFLPLD*HNRSLK
Trigger: TTTCAGTGATCTGTTGTGGCAGTCCAGTGGAAGGAA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTCTCAAGATATGAGATaGCTAGCCTACAGAGATCCC +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSQDMR*LAYRDP
Trigger: GGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATTTATTTTACATGTCTaGAGGATACACAAGGGTAAC +
Preference number: 2 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIFILHV*RIHKGN
Trigger: GTTACCCTTGTGTATCCTGCAGACATGTAAAATAAA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGAAGTGTAACCCCTTaGTCACAAGCACACCAACTC +
Preference number: 2 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGSVTP*SQAHQL
Trigger: GAGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTATAAAAGTAGCAATGTaGCTGAGTGTCACCAACTGT +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILIKVAM*LSVTNC
Trigger: ACAGTTGGTGACACTCAGCCACATTGCTACTTTTAT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAATTCCAGGGGTCAATaGGACAGAATACAGCAGGTA +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINNSRGQ*DRIQQV
Trigger: TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGGAGAACAGCAGGCATaGAAGGGGAATTGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRGEQQA*KGNCSV
Trigger: GACACTGCAATTCCCCTTCCATGCCTGCTGTTCTCC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGATTTGGAGATTTGTaGAAAAGTGAGACTGGATCT +
Preference number: 2 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDRFGDL*KSETGS
Trigger: AGATCCAGTCTCACTTTTCCACAAATCTCCAAATCT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAACAAGACAACAACAGTaGTGGGCCGGATCACTGTGC +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRTRQQQ*WAGSLC
Trigger: GCACAGTGATCCGGCCCACCACTGTTGTTGTCTTGT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CAA 90 bp TTAGCCAAAGTCCCCAGTGGCAAATCAACCTCCATGCGGAGATTCTaGGTCCAAATGAAAGAACATAAACATGAGAAAAGTGGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: LAKVPSGKSTSMRRF*VQMKEHKHEKSGLV
Trigger: GACCAGCCCACTTTTCTCATGTTTATGTTCTTTCATTTGGACCAAGAATCTCCGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGCACACTTACAGACATaGAGAGCTGAAAACCAAAAC +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINAHLQT*RAENQN
Trigger: GTTTTGGTTTTCAGCTCTTCATGTCTGTAAGTGTGC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTATACAGCAGGTAGCCTaGGGTGTTAATATTTTAACA +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILIQQVA*GVNILT
Trigger: TGTTAAAATATTAACACCTCAGGCTACCTGCTGTAT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTATATTCTGTCATCTATaGTACAGTGCACCCACAAAA +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILIFCHL*YSAPTK
Trigger: TTTTGTGGGTGCACTGTAGCATAGATGACAGAATAT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTCCATGTACTCTTTGTaGACACACAGTATGACTTTT +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILSMYSL*THSMTF
Trigger: AAAAGTCATACTGTGTGTGCACAAAGAGTACATGGA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGGAAGTGTAACCCCTTaGTCACAAGCACACCAACTC +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRGSVTP*SQAHQL
Trigger: GAGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCAATGTGTGAGGAGTTaGGAGGGGTTAACTTTTTCA +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINQCVRS*EGLTFS
Trigger: TGAAAAAGTTAACCCCTCCCAACTCCTCACACATTG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCTCTTCAACTCCTATTaGTTTCCGTTGGTTGCAGTC +
Preference number: 2 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLFNSY*FPLVAV
Trigger: GACTGCAACCAACGGAAATCAATAGGAGTTGAAGAG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAGTGCGAAACAGCACTaGATGTTCATGAAGGTAGTG +
Preference number: 2 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSAKQH*MFMKVV
Trigger: CACTACCTTCATGAACATTCAGTGCTGTTTCGCACT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACATTAATAAATGTTACTaGTACAGCCGCTTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKININKCY*YSRLWG
Trigger: ACCCCACAAGCGGCTGTATCAGTAACATTTATTAAT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTCTTGCTTTTTCAACTaGAAAGTGGTAGAGCCTCTA +
Preference number: 2 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSCFFN*KVVEPL
Trigger: TAGAGGCTCTACCACTTTTCAGTTGAAAAAGCAAGA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATCAGGCCCCATGCTTTaGAAACAAGAGTTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKSGPML*KQELER
Trigger: CCTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCAGGCCCCATGCTTTaGAAACAAGAGTTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSGPML*KQELER
Trigger: CCTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTTTATTTTACATGTCTaGAGGATACACAAGGGTAAC +
Preference number: 2 (lower is better)
Translates to: LSEERLGQSHLNAMPTILFILHV*RIHKGN
Trigger: GTTACCCTTGTGTATCCTGCAGACATGTAAAATAAA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAGCCAAAGTCCCCAGTaGCAAATCAACCTCCATGCG +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSQSPQ*QINLHA
Trigger: CGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGGAGAACAGCAGGCATaGAAGGGGAATTGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNGEQQA*KGNCSV
Trigger: GACACTGCAATTCCCCTTCCATGCCTGCTGTTCTCC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACACAAGACAACAACAGTaGTGGGCCGGATCACTGTGC +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNTRQQQ*WAGSLC
Trigger: GCACAGTGATCCGGCCCACCACTGTTGTTGTCTTGT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TCTGTTTTCCTTTCTACGAATAGCGTCAGTGCAGGGGTCCAAGCATTTATGAAAAATAGTGTCCCAACTTaGAAATCCTGCACCCCACGA +
Preference number: 2 (lower is better)
Translates to: SVFLSTNSVSAGVQAFMKNSVPT*KSCTPR
Trigger: TCGTGGGGTGCAGGATTTCCAAGTTGGGACACTATT...TTTCATAAATGCTTGGACCCCTGCACTGACGCTATTCGTAGAAAGGAAAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR-3UTR TCA 90 bp GGGTTGGAGGAGACTGCTGTCCTGTCACTAATTTTGACAAGACAACTTTTGTGTCAACACAAAGCATTTTaGACTCTTGCCAGACTAGTC +
Preference number: 2 (lower is better)
Translates to: GLEETAVLSLILTRQLLCQHKAF*TLARLV
Trigger: GACTAGTCTGGCAAGAGTTCAAAATGCTTTGTGTTG...ACACAAAAGTTGTCTTGTCAAAATTAGTGACAGGACAGCAGTCTCCTCCAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGCAAATCAACCTCCATaGGGAGATTCTTGGTCCAAA +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRANQPP*GDSWSK
Trigger: TTTGGACCAAGAATCTCCGCATGGAGGTTGATTTGC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAATTGCAGTGTCCCTCTaGTTGTCTCAGGAACATCTA +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRIAVSL*LSQEHL
Trigger: TAGATGTTCCTGAGACAAGCAGAGGGACACTGCAAT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACTGAGAAATGGAGGTTaGATCCGAGAATACTACTGG +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLRNGG*IREYYW
Trigger: CCAGTAGTATTCTCGGATGCAACCTCCATTTCTCAG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGTATCAAATGCACGTaGGGAGTAGCTGCACTTCAA +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRCIKCT*GVAALQ
Trigger: TTGAAGTGCAGCTACTCCCCACGTGCATTTGATACA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp AAATATAAGAATAGCAGGTTGACTCATACAAATCAGTGTGCCCAGATAGGCAGTATTAGTGGCCCACAATaGAGAAACAGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: KYKNSRLTHTNQCAQIGSISGPQ*RNSRDR
Trigger: CCTGTCCCTGCTGTTTCTCCATTGTGGGCCACTAAT...ACTGCCTATCTGGGCACACTGATTTGTATGAGTCAACCTGCTATTCTTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR CAA 90 bp GTGGTAGAGCCTCTACTTTCCTATGCTCAGATCAGTAGTTCTCTTTaGTTATGGGGCTGTTCCAAAGGAGACACATCCGTTAATTTCAAA +
Preference number: 2 (lower is better)
Translates to: VVEPLLSYAQISSSL*LWGCSKGDTSVNFK
Trigger: TTTGAAATTAACGGATGTGTCTCCTTTGGAACAGCCCCATAACAAAAGAGAACTACTGATCTGAGCATAGGAAAGTAGAGGCTCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGGCAAATGTGATAACTaGGAATCGACCATACAGACA +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRGKCDN*ESTIQT
Trigger: TGTCTGTATGGTCGATTCTCAGTTATCACATTTGCC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGAACTGAATTGGAGATaGGGGGAACATCAATATTCT +
Preference number: 2 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNELNWR*GEHQYS
Trigger: AGAATATTGATGTTCCCCCCATCTCCAATTCAGTTC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAGTGCGAAACAGCACTaGATGTTCATGAAGGTAGTG +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSAKQH*MFMKVV
Trigger: CACTACCTTCATGAACATTCAGTGCTGTTTCGCACT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGGATCTCTGATTCTGTaGCAACATTATGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRGSLIL*QHYALF
Trigger: AAACAAGGCATAATGTTGTCACAGAATCAGAGATCC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGATCTCTGATTCTGTaGCAACATTATGCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGSLIL*QHYALF
Trigger: AAACAAGGCATAATGTTGTCACAGAATCAGAGATCC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp AAATATAAGAATAGCAGGTTGACTCATACAAATCAGTGTGCCCAGATAGGCAGTTCAACACTCCATGCTTaGACTGAAATGCCTCTCAAC +
Preference number: 2 (lower is better)
Translates to: KYKNSRLTHTNQCAQIGSSTLHA*TEMPLN
Trigger: GTTGAGAGGCATTTCAGTTCAAGCATGGAGTGTTGA...ACTGCCTATCTGGGCACACTGATTTGTATGAGTCAACCTGCTATTCTTATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR-3UTR TCA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTACTCATGAAACCGGGTaGAGAAGTGCAGGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: PEAKYIGSIYSDRITIKITHETG*RSAGEK
Trigger: CTTCTCACCTGCACTTCTTCACCCGGTTTCATGAGT...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCATCTATGCTACAGTaGACCCACAAAAGTTTCTTA +
Preference number: 2 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSSMLQ*THKSFL
Trigger: TAAGAAACTTTTGTGGGTGCACTGTAGCATAGATGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACATTGCAGTGTCCCTCTaGTTGTCTCAGGAACATCTA +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNIAVSL*LSQEHL
Trigger: TAGATGTTCCTGAGACAAGCAGAGGGACACTGCAAT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAACACTCAGGCCCCATaGTTTGAAAACAAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNNTQAP*FENKSW
Trigger: CCAACTCTTGTTTTCAAAGCATGGGGCCTGAGTGTT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp GGGTTGGAGGAGACTGCTGTCCTGTCACTAATTTTGACAAGACAACTTTTGTGTAGCATTTTGAACTCTTaGCAGACTAGTCAAGATGAT +
Preference number: 2 (lower is better)
Translates to: GLEETAVLSLILTRQLLCSILNS*QTSQDD
Trigger: ATCATCTTGACTAGTCTGGCAAGAGTTCAAAATGCT...ACACAAAAGTTGTCTTGTCAAAATTAGTGACAGGACAGCAGTCTCCTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR-3UTR GCA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTGAGAAGTGGCCAGGCTaGTTGGAAGTATATGCCCTT +
Preference number: 2 (lower is better)
Translates to: PEAKYIGSIYSDRITIKIEKWPG*LEVYAL
Trigger: AAGGGCATATACTTCCAAGCAGCCTGGCCACTTCTC...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAATTCCAGGGGTCAATaGGACAGAATACAGCAGGTA +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNNSRGQ*DRIQQV
Trigger: TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACACATCTCAGTTAGGTaGGATGAGATTGCTAAAATA +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRHISVR*DEIAKI
Trigger: TATTTTAGCAATCTCATCTCACCTAACTGAGATGTG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCATCTATGCTACAGTaGACCCACAAAAGTTTCTTA +
Preference number: 2 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSSMLQ*THKSFL
Trigger: TAAGAAACTTTTGTGGGTGCACTGTAGCATAGATGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAATATTCTGTCATCTATaGTACAGTGCACCCACAAAA +
Preference number: 2 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKIFCHL*YSAPTK
Trigger: TTTTGTGGGTGCACTGTAGCATAGATGACAGAATAT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACTAATTCTACCCAATTaGTTCAATCTACCATCTATC +
Preference number: 2 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVLILPN*FNLPSI
Trigger: GATAGATGGTAGATTGAAGCAATTGGGTAGAATTAG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTTTATGTGTATCAAATaGACGTGGGGAGTAGCTGCA +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNFMCIK*TWGVAA
Trigger: TGCAGCTACTCCCCACGTGCATTTGATACACATAAA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAAGATTTGGAGATTTGTaGAAAAGTGAGACTGGATCT +
Preference number: 2 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKRFGDL*KSETGS
Trigger: AGATCCAGTCTCACTTTTCCACAAATCTCCAAATCT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACATTAATAAATGTTACTaGTACAGCCGCTTGTGGGGT +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNINKCY*YSRLWG
Trigger: ACCCCACAAGCGGCTGTATCAGTAACATTTATTAAT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCACATCTCAGTTAGGTaGGATGAGATTGCTAAAATA +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNHISVR*DEIAKI
Trigger: TATTTTAGCAATCTCATCTCACCTAACTGAGATGTG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACATACAGCAGGTAGCCTaGGGTGTTAATATTTTAACA +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNIQQVA*GVNILT
Trigger: TGTTAAAATATTAACACCTCAGGCTACCTGCTGTAT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCATCTATGCTACAGTaGACCCACAAAAGTTTCTTA +
Preference number: 2 (lower is better)
Translates to: LTIVELINVTDTAACGVVSSMLQ*THKSFL
Trigger: TAAGAAACTTTTGTGGGTGCACTGTAGCATAGATGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTCCATGTACTCTTTGTaGACACACAGTATGACTTTT +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSMYSL*THSMTF
Trigger: AAAAGTCATACTGTGTGTGCACAAAGAGTACATGGA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCTAATTCTACCCAATTaGTTCAATCTACCATCTATC +
Preference number: 2 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLILPN*FNLPSI
Trigger: GATAGATGGTAGATTGAAGCAATTGGGTAGAATTAG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCTAATTCTACCCAATTaGTTCAATCTACCATCTATC +
Preference number: 2 (lower is better)
Translates to: LTIVELINVTDTAACGVVLILPN*FNLPSI
Trigger: GATAGATGGTAGATTGAAGCAATTGGGTAGAATTAG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR GCA 90 bp AAATATAAGAATAGCAGGTTGACTCATACAAATCAGTGTGCCCAGATAGGCAGTTGTTTGTACCAGGGATaGTCTGGAATTTATTTTCAA +
Preference number: 2 (lower is better)
Translates to: KYKNSRLTHTNQCAQIGSCLYQG*SGIYFQ
Trigger: TTGAAAATAAATTCCAGAGCATCCCTGGTACAAACA...ACTGCCTATCTGGGCACACTGATTTGTATGAGTCAACCTGCTATTCTTATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR-3UTR TCA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTATAAGAATAGCAGGTTaGCTCATACAAATCAGTGTG +
Preference number: 2 (lower is better)
Translates to: PEAKYIGSIYSDRITIKIIRIAG*LIQISV
Trigger: CACACTGATTTGTATGAGTCAACCTGCTATTCTTAT...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR-3UTR CCA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTAGAATACAGAAACAGTaGCTCTGTGTTATCTCTGAA +
Preference number: 2 (lower is better)
Translates to: PEAKYIGSIYSDRITIKIRIQKQ*LCVISE
Trigger: TTCAGAGATAACACAGAGCCACTGTTTCTGTATTCT...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR GCA 72 bp CCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTaGACACACAGCCTTGGAGTGCTGATTGGGCAACAC +
Preference number: 3 (lower is better)
Translates to: PRLCYHRALSGW*THSLGVLIGQH
Trigger: GTGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 72 bp CCACCGTGCGCTCTCTGGCTGGTGCACACACAGCCTTaGAGTGCTGATTGGGCAACACCAACTGGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: PPCALWLVHTQP*SADWATPTGPS
Trigger: AGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGCACGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 72 bp ACAGGGCCAGGTCCAAAGCCCACACACCAGTCCCTGTaGTCAAGACTGAGTGCAGAGGCAGCAGGTGACCAG +
Preference number: 3 (lower is better)
Translates to: TGPGPKPTHQSL*SRLSAEAAGDQ
Trigger: CTGGTCACCTGCTGCCTCTGCACTCAGTCTTGATCACAGGGACTGGTGTGTGGGCTTTGGACCTGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR CCA 72 bp AAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTaGCTGGTGCACACACAGCCTTGGAGTGCTGATTGG +
Preference number: 3 (lower is better)
Translates to: KTASTLLPPCAL*LVHTQPWSADW
Trigger: CCAATCAGCACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 72 bp GTGGTTCTGAAAGCAAAGGTAGAGTTCATCTGTGGCTaGGCTGCAGCCCCTGGGCTTGAGGTGGGCGTGATC +
Preference number: 3 (lower is better)
Translates to: VVLKAKVEFICG*AAAPGLEVGVI
Trigger: GATCACGCCCACCTCAAGCCCAGGGGCTGCAGCCCAGCCACAGATGAACTCTACCTTTGCTTTCAGAACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 72 bp CGCTCTCTGGCTGGTGCACACACAGCCTTGGAGTGCTaGTTGGGCAACACCAACTGGTCCCTCTCATTGACA +
Preference number: 3 (lower is better)
Translates to: RSLAGAHTALEC*LGNTNWSLSLT
Trigger: TGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR GCA 72 bp AGCCAGCACACGAATAGTGTCCCAACTTGGAAATCCTaGACCCCACGAGCTCTAAACCCAGACAGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: SQHTNSVPTWKS*TPRALNPDRAR
Trigger: CCTGGCCCTGTCTGGGTTTAGAGCTCGTGGGGTGCAGGATTTCCAAGTTGGGACACTATTCGTGTGCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTGGAAGTGTAACCCCTaGGTCACAAGCACACCAACT +
Preference number: 3 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWWKCNP*VTSTPT
Trigger: AGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCCA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 72 bp GAGGTTGCATCCGAGAATACTACTGGAAGAGCCCTCTaGTGGAGGAGGTCAGCATGGTCCCTTCCACCCAAG +
Preference number: 3 (lower is better)
Translates to: EVASENTTGRAL*WRRSAWSLPPK
Trigger: CTTGGGTGGAAGGGACCATGCTGACCTCCTCCATCAGAGGGCTCTTCCAGTAGTATTCTCGGATGCAACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCCAATGTGTGAGGAGTaGGGAGGGGTTAACTTTTTC +
Preference number: 3 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWPMCEE*GGVNFF
Trigger: GAAAAAGTTAACCCCTCCCAACTCCTCACACATTGG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 72 bp TCAACCACCAGCCAGCACACGAATAGTGTCCCAACTTaGAAATCCTGCACCCCACGAGCTCTAAACCCAGAC +
Preference number: 3 (lower is better)
Translates to: STTSQHTNSVPT*KSCTPRALNPD
Trigger: GTCTGGGTTTAGAGCTCGTGGGGTGCAGGATTTCCAAGTTGGGACACTATTCGTGTGCTGGCTGGTGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
3UTR-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATGGAAGTGTAACCCCTaGGTCACAAGCACACCAACT +
Preference number: 3 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIWKCNP*VTSTPT
Trigger: AGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCCA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGACTGAGAAATGGAGGTaGCATCCGAGAATACTACTG +
Preference number: 3 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWTEKWR*HPRILL
Trigger: CAGTAGTATTCTCGGATGCAACCTCCATTTCTCAGT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCAAGAATCAAAACTTaGTGGCTCAAGAGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWARIKT*WLKRKS
Trigger: GCTCTTCCTCTTGAGCCACAAAGTTTTGATTCTTGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR GCA 72 bp GGCTTGGAGGCTGGGGGTGAGTCTCAAGATATGAGATaGCTAGCCTACAGAGATCCCAAAAGGATGTCCCAA +
Preference number: 3 (lower is better)
Translates to: GLEAGGESQDMR*LAYRDPKRMSQ
Trigger: TTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGACTCACCCCCAGCCTCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 72 bp ATAGGAAAGAGCAGAAGCACAAGACAACAACAGTGGTaGGCCGGATCACTGTGCATCCCTCCAGGAAGGACA +
Preference number: 3 (lower is better)
Translates to: IGKSRSTRQQQW*AGSLCIPPGRT
Trigger: TGTCCTTCCTGGAGGGATGCACAGTGATCCGGCCCACCACTGTTGTTGTCTTGTGCTTCTGCTCTTTCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGGAAGTGTAACCCCTaGGTCACAAGCACACCAACT +
Preference number: 3 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDWKCNP*VTSTPT
Trigger: AGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTGGAGATTTGGAGATTaGTGGAAAAGTGAGACTGGA +
Preference number: 3 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWWRFGD*WKSETG
Trigger: TCCAGTCTCACTTTTCCACAAATCTCCAAATCTCCA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGAGTTGGAAAGGGATaGAACCAAACCATTAGAGCA +
Preference number: 3 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRVGKG*NQTIRA
Trigger: TGCTCTAATGGTTTGGTTCAATCCCTTTCCAACTCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACCAATGTGTGAGGAGTaGGGAGGGGTTAACTTTTTC +
Preference number: 3 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIPMCEE*GGVNFF
Trigger: GAAAAAGTTAACCCCTCCCAACTCCTCACACATTGG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAACTGAGAAATGGAGGTaGCATCCGAGAATACTACTG +
Preference number: 3 (lower is better)
Translates to: GLSEERLGQSHLNAMPTITEKWR*HPRILL
Trigger: CAGTAGTATTCTCGGATGCAACCTCCATTTCTCAGT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATGGAGATTTGGAGATTaGTGGAAAAGTGAGACTGGA +
Preference number: 3 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIWRFGD*WKSETG
Trigger: TCCAGTCTCACTTTTCCACAAATCTCCAAATCTCCA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCAAGAATCAAAACTTaGTGGCTCAAGAGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDARIKT*WLKRKS
Trigger: GCTCTTCCTCTTGAGCCACAAAGTTTTGATTCTTGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp TCCTTCCCTACCCAGTACAGTCAGCAAAGCACACTCATGAAACCGGGTGAAGAAAAGTGGCCAGGCTGCTaGGAAGTATATGCCCTTAGA +
Preference number: 3 (lower is better)
Translates to: SFPTQYSQQSTLMKPGEEKWPGC*EVYALR
Trigger: TCTAAGGGCATATACTTCCAAGCAGCCTGGCCACTT...TTCTTCACCCGGTTTCATGAGTGTGCTTTGCTGACTGTACTGGGTAGGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR TCA 72 bp CCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTaGATGTTCATGAAGGTAGTGGGAGGAGAGGCAAAT +
Preference number: 3 (lower is better)
Translates to: PSLLSNCSAKQH*MFMKVVGGEAN
Trigger: ATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGATAAGACTGGAGATTaGGAGATTTGTGGAAAAGTG +
Preference number: 3 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIDKTGD*EICGKV
Trigger: CACTTTTCCACAAATCTCCAAATCTCCAGTCTTATC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTACTGAGAAATGGAGGTaGCATCCGAGAATACTACTG +
Preference number: 3 (lower is better)
Translates to: LSEERLGQSHLNAMPTILTEKWR*HPRILL
Trigger: CAGTAGTATTCTCGGATGCAACCTCCATTTCTCAGT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCAAGAATCAAAACTTaGTGGCTCAAGAGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: LSEERLGQSHLNAMPTILARIKT*WLKRKS
Trigger: GCTCTTCCTCTTGAGCCACAAAGTTTTGATTCTTGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACATCAGTAGTTCTCTTTaGTTATGGGGCTGTTCCAAA +
Preference number: 3 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDISSSL*LWGCSK
Trigger: TTTGGAACAGCCCCATAACAAAAGAGAACTACTGAT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCTCAGGCCCCATGCTTaGAAAACAAGAGTTGGAAAG +
Preference number: 3 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINLRPHA*KTRVGK
Trigger: CTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGAG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTATACACAAGGGTAACTaGTCAGAAGAGAACATCCTC +
Preference number: 3 (lower is better)
Translates to: LSEERLGQSHLNAMPTILIHKGN*SEENIL
Trigger: GAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGATAAGACTGGAGATTaGGAGATTTGTGGAAAAGTG +
Preference number: 3 (lower is better)
Translates to: LSEERLGQSHLNAMPTILDKTGD*EICGKV
Trigger: CACTTTTCCACAAATCTCCAAATCTCCAGTCTTATC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 72 bp AGACCTTCCTTCCACTGGACTGCCACAACAGATCACTaGAATTCTGGAGGAGTATACTTTCTTCTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: RPSFHWTATTDH*NSGGVYFLLPP
Trigger: GGGAGGAAGAAGAAAGTATACTCCTCCAGAATTTCAGTGATCTGTTGTGGCAGTCCAGTGGAAGGAAGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 72 bp CAGGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTaGACGCTATGCCTACAATACTTAAATGTATTTACA +
Preference number: 3 (lower is better)
Translates to: QACPRNAWASHI*TLCLQYLNVFT
Trigger: TGTAAATACATTTAAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 72 bp GAAAGCAAACCTAATAGTCTTAGCCAAAGTCCCCAGTaGCAAATCAACCTCCATGCGGAGATTCTTGGTCCA +
Preference number: 3 (lower is better)
Translates to: ESKPNSLSQSPQ*QINLHAEILGP
Trigger: TGGACCAAGAATCTCCGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCTAAGACTATTAGGTTTGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGGAAGTGTAACCCCTaGGTCACAAGCACACCAACT +
Preference number: 3 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRWKCNP*VTSTPT
Trigger: AGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCCA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCAGCCGCTTGTGGGGTaGTTTAAATACCTATATACT +
Preference number: 3 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINQPLVG*FKYLYT
Trigger: AGTATATAGGTATTTAAACAACCCCACAAGCGGCTG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGCAGTGTCCCTCTGCTaGTCTCAGGAACATCTAGTT +
Preference number: 3 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKAVSLC*SQEHLV
Trigger: AACTAGATGTTCCTGAGACAAGCAGAGGGACACTGC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 72 bp TCTAACTTCTTACCAGAACAGATAAAAGTAGCAATGTaGCTGAGTGTCACCAACTGTCCGTCCCTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: SNFLPEQIKVAM*LSVTNCPSLLS
Trigger: AGAGAGAAGGGACGGACAGTTGGTGACACTCAGCCACATTGCTACTTTTATCTGTTCTGGTAAGAAGTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCTCAGGCCCCATGCTTaGAAAACAAGAGTTGGAAAG +
Preference number: 3 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLRPHA*KTRVGK
Trigger: CTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGAG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 72 bp TGTTTAACTGTGGAATGCCCTGAACTGAATTGGAGATaGGGGGAACATCAATATTCTGTCATCTATGCTACA +
Preference number: 3 (lower is better)
Translates to: CLTVECPELNWR*GEHQYSVIYAT
Trigger: TGTAGCATAGATGACAGAATATTGATGTTCCCCCCATCTCCAATTCAGTTCAGGGCATTCCACAGTTAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CCA 72 bp CTTTCCTATGCTCAGATCAGTAGTTCTCTTTTGTTATaGGGCTGTTCCAAAGGAGACACATCCGTTAATTTC +
Preference number: 3 (lower is better)
Translates to: LSYAQISSSLLL*GCSKGDTSVNF
Trigger: GAAATTAACGGATGTGTCTCCTTTGGAACAGCCCCATAACAAAAGAGAACTACTGATCTGAGCATAGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGATAAGACTGGAGATTaGGAGATTTGTGGAAAAGTG +
Preference number: 3 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRDKTGD*EICGKV
Trigger: CACTTTTCCACAAATCTCCAAATCTCCAGTCTTATC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGGAGATTTGGAGATTaGTGGAAAAGTGAGACTGGA +
Preference number: 3 (lower is better)
Translates to: IHKGNLSEENILLSVQNNWRFGD*WKSETG
Trigger: TCCAGTCTCACTTTTCCACAAATCTCCAAATCTCCA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACATCAGTAGTTCTCTTTaGTTATGGGGCTGTTCCAAA +
Preference number: 3 (lower is better)
Translates to: IHKGNLSEENILLSVQNNISSSL*LWGCSK
Trigger: TTTGGAACAGCCCCATAACAAAAGAGAACTACTGAT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 72 bp GATTTGTGGAAAAGTGAGACTGGATCTCTGATTCTGTaGCAACATTATGCCTTGTTTCAGAAACACAGAGAA +
Preference number: 3 (lower is better)
Translates to: DLWKSETGSLIL*QHYALFQKHRE
Trigger: TTCTCTGTGTTTCTGAAACAAGGCATAATGTTGTCACAGAATCAGAGATCCAGTCTCACTTTTCCACAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 72 bp GATTTGGAGATTTGTGGAAAAGTGAGACTGGATCTCTaGTTCTGTGACAACATTATGCCTTGTTTCAGAAAC +
Preference number: 3 (lower is better)
Translates to: DLEICGKVRLDL*FCDNIMPCFRN
Trigger: GTTTCTGAAACAAGGCATAATGTTGTCACAGAATCAGAGATCCAGTCTCACTTTTCCACAAATCTCCAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR TCA 72 bp AAGATAAGACTGGAGATTTGGAGATTTGTGGAAAAGTaGGACTGGATCTCTGATTCTGTGACAACATTATGC +
Preference number: 3 (lower is better)
Translates to: KIRLEIWRFVEK*DWISDSVTTLC
Trigger: GCATAATGTTGTCACAGAATCAGAGATCCAGTCTCACTTTTCCACAAATCTCCAAATCTCCAGTCTTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR-3UTR CAA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTAAGTCAACGTGTAGGTaGAGTGCCAAAATAGAGATT +
Preference number: 3 (lower is better)
Translates to: PEAKYIGSIYSDRITIKIKSTCR*SAKIEI
Trigger: AATCTCTATTTTGGCACTCAACCTACACGTTGACTT...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428534.2
3UTR GCA 72 bp TTAAAGCAATATGCTGGAAAATCCATGTACTCTTTGTaGACACACAGTATGACTTTTATGTGTATCAAATGC +
Preference number: 3 (lower is better)
Translates to: LKQYAGKSMYSL*THSMTFMCIKC
Trigger: GCATTTGATACACATAAAAGTCATACTGTGTGTGCACAAAGAGTACATGGATTTTCCAGCATATTGCTTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCAGGGCGAGATCCCTaGGGAGCGGCGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWAGRDP*GAAAAQ
Trigger: CTGAGCAGCCGCCGCTCCTCAGGGATCTCGCCCTGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGCAGGCCGTCGCTCTaGCTGGCTTCGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGRPSL*LASLER
Trigger: CCGCTCCAGCGAAGCCAGCCAGAGCGACGGCCTGCC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCACCTCCTCGGGGCATaGACTGGAGGCAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWHLLGA*TGGRAT
Trigger: CGTGGCCCTGCCTCCAGTTCATGCCCCGAGGAGGTG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACCAAAGGCGCGAGTCTaGGGCACAGCGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIPKARV*GTAGRG
Trigger: GCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATCCGCACCGGGTCGCTaGCCCTCCTCACGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISAPGR*PSSRRG
Trigger: GCCACGGCGTGAGGAGGGCCAGCGACCCGGTGCGGA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGCAGGGCGAGATCCCTaGGGAGCGGCGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIAGRDP*GAAAAQ
Trigger: CTGAGCAGCCGCCGCTCCTCAGGGATCTCGCCCTGC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATGTGGATGGCCCCCGTaGCGGCGGTGGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTICGWPP*RRWQLR
Trigger: CCTCAGCTGCCACCGCCGGCACGGGGGCCATCCACA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACCTTCGGGCTGTTCCTaGTGCCCCCGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIPSGCS*CPRAPG
Trigger: CCCAGGGGCTCGGGGGCAGCAGGAACAGCCCGAAGG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGCCCGTGGGGCACTTTaGTGTCGTCCGGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIARGAL*CRPGGR
Trigger: GCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCAGGTCGGTTTTGCTaGCCTCGGGGCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWAGRFC*PRGRAA
Trigger: AGCAGCCCTGCCCCGAGGGCAGCAAAACCGACCTGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCCAAAGGCGCGAGTCTaGGGCACAGCGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDPKARV*GTAGRG
Trigger: GCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGACAGGCACCGTCGAGTaGACCAGGGGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWTGTVE*TRGHWL
Trigger: CAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGTTTTCGGCTCGGCCTaGCTGACAGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWVFGSA*LTAWGW
Trigger: CCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGAAAAC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGGCCGTCGCTCTGGCTaGCTTCGCTGGAGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHGRRSG*LRWSGA
Trigger: CGCGCCGCTCCAGCGAAGCCAGCCAGAGCGACGGCC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTCATCCTCTCCATGTTaGGCAGGGGCGTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWSSSPC*AGASAA
Trigger: CGCCGCCGACGCCCCTGCCCAACATGGAGAGGATGA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTCCGCACCGGGTCGCTaGCCCTCCTCACGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSAPGR*PSSRRG
Trigger: GCCACGGCGTGAGGAGGGCCAGCGACCCGGTGCGGA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CAA 72 bp GGGCTTGAGGTGGGCGTGATCACGGGGAATGCAGGCTaGTCCGAGGAACGCCTGGGCCAGTCACATCTGAAC +
Preference number: 4 (lower is better)
Translates to: GLEVGVITGNAG*SEERLGQSHLN
Trigger: GTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCCTGCATTCCCCGTGATCACGCCCACCTCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTCAGGTAGGCCGAGCTaGTGGTGCTGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWSGRPS*WCWRCC
Trigger: ACAGCAGCGCCAGCACCATCAGCTCGGCCTACCTGA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACACCTCCTCGGGGCATaGACTGGAGGCAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIHLLGA*TGGRAT
Trigger: CGTGGCCCTGCCTCCAGTTCATGCCCCGAGGAGGTG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGCTTGAGGTGGGCGTaGTCACGGGGAATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGLRWA*SRGMQA
Trigger: AGCCTGCATTCCCCGTGATCACGCCCACCTCAAGCC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATGCAGCCCCTGGGCTTaGGGTGGGCGTGATCACGGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTICSPWA*GGRDHG
Trigger: CCCGTGATCACGCCCACCTCAAGCCCAGGGGCTGCA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGTGGATGGCCCCCGTaGCGGCGGTGGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDCGWPP*RRWQLR
Trigger: CCTCAGCTGCCACCGCCGGCACGGGGGCCATCCACA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTCGGGCTGTTCCTGCTaGCCCCGAGCCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSGCSC*PRAPGL
Trigger: CAGCCCAGGGGCTCGGGGGCAGCAGGAACAGCCCGA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCCTTCGGGCTGTTCCTaGTGCCCCCGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDPSGCS*CPRAPG
Trigger: CCCAGGGGCTCGGGGGCAGCAGGAACAGCCCGAAGG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCCTTCGGGCTGTTCCTaGTGCCCCCGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHPSGCS*CPRAPG
Trigger: CCCAGGGGCTCGGGGGCAGCAGGAACAGCCCGAAGG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCCACGCTCACGTTCTaGGGCCGGCCCTCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDATLTF*GRPSAC
Trigger: ACAGGCCGAGGGCCGGCCGCAGAACGTGAGCGTGGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGGCTCCCCCGTCGCTaGACCTCCTCGGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGLPRR*TSSGHE
Trigger: TTCATGCCCCGAGGAGGTGCAGCGACGGGGGAGCCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCTCCTCAAGGGGTTCTaGGGGTGGACGACCATGCCG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWLLKGF*GWTTMP
Trigger: CGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCCTGGCTGACAGCCTaGGGCTGGAGAATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWAWLTA*GWRIWC
Trigger: GCACCAGATTCTCCAGCCCCAGGCTGTCAGCCAGGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGGCCGGAGCTGACCTaGACGGGGTTCAGAACCGTA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGPELT*TGFRTV
Trigger: TACGGTTCTGAACCCCGTCCAGGTCAGCTCCGGCCC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGCCGTCGCTCTGGCTaGCTTCGCTGGAGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGRRSG*LRWSGA
Trigger: CGCGCCGCTCCAGCGAAGCCAGCCAGAGCGACGGCC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGACAGGGGGACGAGTaGAAGTTTCGGGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGQGDE*KFRDWP
Trigger: CGGCCAGTCCCGAAACTTCCACTCGTCCCCCTGTCC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGGGCATGGAACTGCTaGCCAGCGTGGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRAWNC*PAWLSG
Trigger: GCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGACAGCGCTGGGAATaGGAGGGACGCCCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGQRWE*EGRPRR
Trigger: ACGCCTCGGGCGTCCCTCCCATTCCCAGCGCTGTCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCACCTCCTCGGGGCATaGACTGGAGGCAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHHLLGA*TGGRAT
Trigger: CGTGGCCCTGCCTCCAGTTCATGCCCCGAGGAGGTG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGCCGCGGCCCACACTTaGGCTTGGAGGAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIAAAHT*AWRRTG
Trigger: ACCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTCGCCGAGGAGCTGGTaGGCCAGGTACCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHSPRSW*ARYPCP
Trigger: GGGACAGGGGTACCTGGCTCACCAGCTCCTCGGCGA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCCTTGAGGCGGTACTaGTGGGCGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDALRRY*WAGVRL
Trigger: CAGCCTCACGCCCGCCCAGCAGTACCGCCTCAAGGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGGGCTCCCCCGTCGCTaGACCTCCTCGGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHGLPRR*TSSGHE
Trigger: TTCATGCCCCGAGGAGGTGCAGCGACGGGGGAGCCC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTCTGAAGCACGAGACTaGGCTTCTCCGCGGACGTGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWSEARD*ASPRTW
Trigger: CCACGTCCGCGGAGAAGCGCAGTCTCGTGCTTCAGA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCGCTGGGGAAGTGCTaGTCGTACCCTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWALGKC*SYPAWF
Trigger: GAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATGGGCAGGTCGGTTTTaGTGCCCTCGGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIWAGRF*CPRGRA
Trigger: AGCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCCCCCGGGTGCTGCATaGTGTCGCCGAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDPPGAA*CRRGAG
Trigger: ACCAGCTCCTCGGCGACAGCATGCAGCACCCGGGGG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCGCTCTCTGGCTGGTaGACACACAGCCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWALSGW*THSLGV
Trigger: CACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGACTCTGCTACCACCGTaGGCTCTCTGGCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWTLLPP*ALWLVH
Trigger: GTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TGGATGGACAGAAGGATGGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACGTGGTCGTGGAGCTGTaGGACTGGGCCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: WMDRRMEGHGDVNHQPAHVVVEL*DWASMM
Trigger: CATCATGGAGGCCCAGTCCCACAGCTCCACGACCAC...GTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCCATCCTTCTGTCCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGGCTCCGCCACGTGTaGCAGGGACCCATGGATCTC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGLRHV*QGPMDL
Trigger: GAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGACTCGGAAGCAGCAGTaGGGTTCCGGTGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWTRKQQ*GSGVGR
Trigger: TCTCCCCACACCGGAACCCCACTGCTGCTTCCGAGT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGGAAGTTTCGGGACTaGCCGCCCTCGGGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHWKFRD*PPSGRV
Trigger: CACGCGGCCCGAGGGCGGCCAGTCCCGAAACTTCCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCCAGCGTGGCTGTCTaGCAGCCCGGGCGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDASVAV*QPGRVK
Trigger: TTTGACGCGCCCGGGCTGCCAGACAGCCACGCTGGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGCTGCTCGAGGGCATaGAACTGCTGGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGCSRA*NCWPAW
Trigger: CCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGTACCCCTGTCCCACTaGGTCCTGGTTCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWVPLSH*VLVLHA
Trigger: GGCATGCAGAACCAGGACCCAGTGGGACAGGGGTAC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCCCCCGACATCAGGCTaGAGTGGTCCCCATCGTCTA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWPPTSG*SGPHRL
Trigger: TAGACGATGGGGACCACTCCAGCCTGATGTCGGGGG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGACAGCGCTGGGAATaGGAGGGACGCCCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGQRWE*EGRPRR
Trigger: ACGCCTCGGGCGTCCCTCCCATTCCCAGCGCTGTCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACAGAAGGGCCGGAGCTaGCCTGGACGGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIQKGRS*PGRGSE
Trigger: TTCTGAACCCCGTCCAGGTCAGCTCCGGCCCTTCTG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGGCGACCTGGACTGTaGATGGCTGCCGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRRPGL*MAAGIS
Trigger: AGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGCTTGAGGTGGGCGTaGTCACGGGGAATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGLRWA*SRGMQA
Trigger: AGCCTGCATTCCCCGTGATCACGCCCACCTCAAGCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACGAATAGTGTCCCAACTTGGCAGCTCAGCAATGTaGGGCTGCTGGGATCGCTTC +
Preference number: 4 (lower is better)
Translates to: GGPWRCQPPASTRIVSQLGSSAM*GCWDRF
Trigger: GAAGCGATCCCAGCAGCCTCACATTGCTGAGCTGCC...AAGTTGGGACACTATTCGTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCATCGGGTCACCAGTaGTGCTCACTGCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWASGHQ*CSLQTH
Trigger: GTGAGTCTGCAGTGAGCAGCACTGGTGACCCGATGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTGGACTGTGAATGGCTaGCGGAATCTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWWTVNG*RNLSGV
Trigger: CACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGGCTCCCCCGTCGCTaGACCTCCTCGGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGLPRR*TSSGHE
Trigger: TTCATGCCCCGAGGAGGTGCAGCGACGGGGGAGCCC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCCCTCGGGGCAGGGCTaGTCGAGGGCATGGAACTGC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILPSGQG*SRAWNC
Trigger: GCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGGGCAGGTCGGTTTTaGTGCCCTCGGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDWAGRF*CPRGRA
Trigger: AGCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACACAGGCACCGTCGAGTaGACCAGGGGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDTGTVE*TRGHWL
Trigger: CAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCTGACCGGGGCGGCCTaGCCCCGGGTGCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINLTGAA*PRVLHA
Trigger: AGCATGCAGCACCCGGGGGCAGGCCGCCCCGGTCAG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGCTTGACGGCTGGCTaGCCATGCCGTGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSLTAG*PCREPL
Trigger: CAGGGGCTCACGGCATGGGCAGCCAGCCGTCAAGCT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCGTGATCACGGGGAATaGAGGCTTGTCCGAGGAACG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRDHGE*RLVRGT
Trigger: CGTTCCTCGGACAAGCCTGCATTCCCCGTGATCACG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGATATTCCATGTGGATaGCCCCCGTGCCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIDIPCG*PPCRRW
Trigger: CCACCGCCGGCACGGGGGCCATCCACATGGAATATC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGCCTGGCTGACAGCCTaGGGCTGGAGAATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIAWLTA*GWRIWC
Trigger: GCACCAGATTCTCCAGCCCCAGGCTGTCAGCCAGGC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGGTGGCGGCCGAGGATaGATGTCCCCTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHGGGRG*MSPRCF
Trigger: GAAGCAGCGAGGGGACATCCATCCTCGGCCGCCACC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGAATCTCTCGGGGGTaGCGGCCGAGGATGGATGTC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGISRG*RPRMDV
Trigger: GACATCCATCCTCGGCCGCCACCCCCGAGAGATTCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGTCGGCCAGGCGACCTaGACTGTGAATGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDVGQAT*TVNGCR
Trigger: CCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGAC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCGTGCTCCATCCATTTaGTCCCTGCCGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRAPSI*SLPGFS
Trigger: GGAGAAACCCGGCAGGGACCAAATGGATGGAGCACG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTTGAGGCGGTACTGCTaGGCGGGCGTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDLRRYC*AGVRLS
Trigger: GCTCAGCCTCACGCCCGCCCAGCAGTACCGCCTCAA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTCATCCTCTCCATGTTaGGCAGGGGCGTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSSSPC*AGASAA
Trigger: CGCCGCCGACGCCCCTGCCCAACATGGAGAGGATGA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGGAAGTTTCGGGACTaGCCGCCCTCGGGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILWKFRD*PPSGRV
Trigger: CACGCGGCCCGAGGGCGGCCAGTCCCGAAACTTCCA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGACAGGGGGACGAGTaGAAGTTTCGGGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGQGDE*KFRDWP
Trigger: CGGCCAGTCCCGAAACTTCCACTCGTCCCCCTGTCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAGGGCATGGAACTGCTaGCCAGCGTGGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIRAWNC*PAWLSG
Trigger: GCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGCTGCTCGAGGGCATaGAACTGCTGGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGCSRA*NCWPAW
Trigger: CCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCTTCCGGGGCTGTTGTaGAGCATCAAGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWLPGLL*SIKCSG
Trigger: CCCAGAGCACTTGATGCTCCACAACAGCCCCGGAAG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCCCAAAGCTGGCACATaGCTGGTAGCCCCTGACAAC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWPKAGT*LVAPDN
Trigger: GTTGTCAGGGGCTACCAGCCATGTGCCAGCTTTGGG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTCCCTCGGCATAGCCTaGCGCCTGCTGCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHSLGIA*RLLPPK
Trigger: CTTTGGGGGCAGCAGGCGCCAGGCTATGCCGAGGGA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGACAGCGCTGGGAATaGGAGGGACGCCCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGQRWE*EGRPRR
Trigger: ACGCCTCGGGCGTCCCTCCCATTCCCAGCGCTGTCC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACAGCCCACGGGTTGCTaGGATCATGGAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIQPTGC*DHGERW
Trigger: CCATCGCTCTCCATGATCTCAGCAACCCGTGGGCTG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCGGCTTAGGATCTGCTaGTGCATGTGGAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRLRIC*CMWRET
Trigger: CGTCTCTCTCCACATGCATCAGCAGATCCTAAGCCG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCAGAAGGGCCGGAGCTaGCCTGGACGGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHQKGRS*PGRGSE
Trigger: TTCTGAACCCCGTCCAGGTCAGCTCCGGCCCTTCTG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGACAACTGCCAAGCTTaGCGGCTGGCTGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHDNCQA*RLAAHA
Trigger: GGCATGGGCAGCCAGCCGTCAAGCTTGGCAGTTGTC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCTTTCGTGTCTTGCTaGCTGAAGCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWAFVSC*LKPTVW
Trigger: CCAAACCGTGGGCTTCAGTCAGCAAGACACGAAAGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAAGGGCCTCTGCGCTTCCAGCAATCCACGCCCCTCAGCATAATCCTGGGACTTGCAGAGGCAGCAGGTaGCCAGGTTGCAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: ERASALPAIHAPQHNPGTCRGSR*PGCRRK
Trigger: CTTTCTTCTGCAACCTGGTCACCTGCTGCCTCTGCA...AGTCCCAGGATTATGCTGAGGGGCGTGGATTGCTGGAAGCGCAGAGGCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR TCA 90 bp ACCAGGTTGCAGAAGAAAGGGCCTCTGCGCTTCCAGCAATCCACGCCCCTCAGCACACACCAGTCCCTGTaGTCAAGACTGAGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: TRLQKKGPLRFQQSTPLSTHQSL*SRLSAE
Trigger: CTCTGCACTCAGTCTTGATCACAGGGACTGGTGTGT...GCTGAGGGGCGTGGATTGCTGGAAGCGCAGAGGCCCTTTCTTCTGCAACCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTGTGGATGGCCCCCGTaGCGGCGGTGGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINCGWPP*RRWQLR
Trigger: CCTCAGCTGCCACCGCCGGCACGGGGGCCATCCACA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTGGGGGACTGTTGGCTaGTGCATGAAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWWGTVG*CMKTDH
Trigger: GTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACAGAGAGGTCGCTTCTaGCCGGGAGAAGCGTCATGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIQRGRF*PGEASW
Trigger: CCATGACGCTTCTCCCGGGCAGAAGCGACCTCTCTG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGCCACGCTCACGTTCTaGGGCCGGCCCTCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINATLTF*GRPSAC
Trigger: ACAGGCCGAGGGCCGGCCGCAGAACGTGAGCGTGGC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGGGCGCTGGGGAAGTaGTGCTCGTACCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDRALGK*CSYPAW
Trigger: CCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGCCCGTGGGGCACTTTaGTGTCGTCCGGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINARGAL*CRPGGR
Trigger: GCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCAGGTCGGTTTTGCTaGCCTCGGGGCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILAGRFC*PRGRAA
Trigger: AGCAGCCCTGCCCCGAGGGCAGCAAAACCGACCTGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCCTGCCCCCGGGTGCTaGATGCTGTCGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINPAPGC*MLSPRS
Trigger: GCTCCTCGGCGACAGCATGCAGCACCCGGGGGCAGG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AGTGCAGAGGCAGCAGGTGACCAGGTTGCAGAAGAAAGGGCCTCTGCGCTTCCAAGAAGAAAGGGCCTCTaGGCTTCCAGCAATCCACGC +
Preference number: 4 (lower is better)
Translates to: SAEAAGDQVAEERASALPRRKGL*ASSNPR
Trigger: GCGTGGATTGCTGGAAGCGCAGAGGCCCTTTCTTCT...TGGAAGCGCAGAGGCCCTTTCTTCTGCAACCTGGTCACCTGCTGCCTCTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGGTTGCTGAGATCATaGAGAGCGATGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGLLRS*RAMGCC
Trigger: ACAGCAGCCCATCGCTCTCCATGATCTCAGCAACCC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGATATTCCATGTGGATaGCCCCCGTGCCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHDIPCG*PPCRRW
Trigger: CCACCGCCGGCACGGGGGCCATCCACATGGAATATC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCTGACAGCCTGGGGCTaGAGAATCTGGTGCTATCCA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWLTAWG*RIWCYP
Trigger: TGGATAGCACCAGATTCTCCAGCCCCAGGCTGTCAG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGGCCGGAGCTGACCTaGACGGGGTTCAGAACCGTA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGPELT*TGFRTV
Trigger: TACGGTTCTGAACCCCGTCCAGGTCAGCTCCGGCCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGTGACATGAGCCTCTaGGCCATGCACTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGDMSL*AMHCLH
Trigger: GTGAAGACAGTGCATGGCCCAGAGGCTCATGTCACC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGTGGCGGCCGAGGATaGATGTCCCCTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGGGRG*MSPRCF
Trigger: GAAGCAGCGAGGGGACATCCATCCTCGGCCGCCACC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGAATCTCTCGGGGGTaGCGGCCGAGGATGGATGTC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGISRG*RPRMDV
Trigger: GACATCCATCCTCGGCCGCCACCCCCGAGAGATTCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGTCGGCCAGGCGACCTaGACTGTGAATGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILVGQAT*TVNGCR
Trigger: CCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGAC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACAAGTCACCGGGCCCGTaGGGCACTTTGCTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHKSPGP*GTLLSS
Trigger: GGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGCTGCTCGAGGGCATaGAACTGCTGGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGCSRA*NCWPAW
Trigger: CCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAAGGGGTTCTGCGGGTaGACGACCATGCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIKGFCG*TTMPLQ
Trigger: CTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGAAGGCGTTTCCACTaGTGCCACTTCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGRRFH*CHFRGC
Trigger: ACAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAGGCCGAAATTCAGCTaGCCCCCGCTCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIRPKFS*PPLPCM
Trigger: CATGCAAGGGAGCGGGGGCCAGCTGAATTTCGGCCT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTCCCTCGGCATAGCCTaGCGCCTGCTGCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILSLGIA*RLLPPK
Trigger: CTTTGGGGGCAGCAGGCGCCAGGCTATGCCGAGGGA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCTGCAGACTCACTCGTaGGCTTGTTCTGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWLQTHS*ACSAVR
Trigger: CCTCACAGCAGAACAAGCCCACGAGTGAGTCTGCAG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS-3UTR CCA 90 bp GAAAGGGCCTCTGCGCTTCCAGCAATCCACGCCCCTCAGCATAATCCTGGGACTGTCATGGTCATGAGATaGGCTGTCCAGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: ERASALPAIHAPQHNPGTVMVMR*AVQASS
Trigger: GCTGGATGCCTGGACAGCCCATCTCATGACCATGAC...AGTCCCAGGATTATGCTGAGGGGCGTGGATTGCTGGAAGCGCAGAGGCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACAGGGATGTGGAGGGCTaGAGGGAGACTCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHRDVEG*RETRKQ
Trigger: CTGCTTCCGAGTCTCCCTTCAGCCCTCCACATCCCT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAGTATTCTGCTGGGCTaGCTCCTGCATGGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISILLG*LLHGAH
Trigger: ATGCGCCCCATGCAGGAGTCAGCCCAGCAGAATACT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCGTGGGCTTGTTCTGTaGGGACTCAGAAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDRGLVL*GLRRAG
Trigger: TCCGGCCCTTCTGAGTCCTCACAGAACAAGCCCACG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTCACCAAGGGCTCCCTaGGTCGGTCGGCCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSPRAP*VGRPGD
Trigger: GTCGCCTGGCCGACCGACTCAGGGAGCCCTTGGTGA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTGTTGGCTGCTGCATaGAGACTGACCACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTILLAAA*RLTTRA
Trigger: AGCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGTGCTCTTCAGCTTTaGGGCTTGAATCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGALQL*GLNPGT
Trigger: GGTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATGCCCAAGCATCTGCTaGCCGGGGCGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVCPSIC*PGRPAP
Trigger: GGGGGCAGGCCGCCCCGGTCAGCAGATGCTTGGGCA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGACAACTGCCAAGCTTaGCGGCTGGCTGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILDNCQA*RLAAHA
Trigger: GGCATGGGCAGCCAGCCGTCAAGCTTGGCAGTTGTC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAACTGGAAGAGCCCTCTaGTGGAGGAGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTITGRAL*WRRSAW
Trigger: CCATGCTGACCTCCTCCATCAGAGGGCTCTTCCAGT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGTCTGCATAGGGGCTaGGCTGGCCAGTTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHCLHRG*AGQLAG
Trigger: CCCTGCTAACTGGCCAGCGCAGCCCCTATGCAGACA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGCATCGGGTCACCAGTaGTGCTCACTGCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIASGHQ*CSLQTH
Trigger: GTGAGTCTGCAGTGAGCAGCACTGGTGACCCGATGC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGCAGTCCAGCCACCTaGACACGAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWSSPAT*TRTPSS
Trigger: AGAAGAAGGAGTTCGTGTGCAGGTGGCTGGACTGCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGCGCTGGGGAAGTGCTaGTCGTACCCTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHALGKC*SYPAWF
Trigger: GAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTCGAGGGCATGGAACTaGTGGCCAGCGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHSRAWN*WPAWLS
Trigger: AGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCCAAAGGCGCGAGTCTaGGGCACAGCGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNPKARV*GTAGRG
Trigger: GCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGACGACCATGCCGTTaGAGAACCCAAAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGRPCR*RTQRRE
Trigger: CTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGCGGGTGGACGACCATaGCGTTGCAGAACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHAGGRP*RCRTQR
Trigger: CCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGCCACCGTAGGGGTTaGTGTTCTCCCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGHRRG*CSPRGS
Trigger: AGACCCTCGGGGAGAACAGCAACCCCTACGGTGGCC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCCCCCGGGTGCTGCATaGTGTCGCCGAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINPPGAA*CRRGAG
Trigger: ACCAGCTCCTCGGCGACAGCATGCAGCACCCGGGGG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCGCTCTCTGGCTGGTaGACACACAGCCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDALSGW*THSLGV
Trigger: CACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACGAATAGTGTCCCAACTTTCTTTTCAGTGGTCGTaGAGCTGTGGGACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGPWRCQPPASTRIVSQLSFQWS*SCGTGP
Trigger: AGGCCCAGTCCCACAGCTCCACGACCACTGAAAAGA...AAGTTGGGACACTATTCGTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCCATGTAACCATTCCTaGGGTCCATGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWPCNHS*GPWQTP
Trigger: CGGTGTTTGCCATGGACCCCAGGAATGGTTACATGG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGCAGGGTGGATGAGTaGAGGGCTGTGTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGRVDE*RAVSKG
Trigger: GCCTTTGGACACAGCCCTCCACTCATCCACCCTGCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCCGCACCGGGTCGCTaGCCCTCCTCACGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSAPGR*PSSRRG
Trigger: GCCACGGCGTGAGGAGGGCCAGCGACCCGGTGCGGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCCTCATCGTTCAGGTTaGCATCAGCGTCCATGGTCA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWPHRSG*HQRPWS
Trigger: TGACCATGGACGCTGATGCCAACCTGAACGATGAGG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGAGCATCAAGTGCTCTaGGCCACCGTAGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIEHQVL*ATVGVA
Trigger: AGCAACCCCTACGGTGGCCCAGAGCACTTGATGCTC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCCGGGGCTGTTGTaGAGCATCAAGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTILPGLL*SIKCSG
Trigger: CCCAGAGCACTTGATGCTCCACAACAGCCCCGGAAG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGGCCGAAATTCAGCTaGCCCCCGCTCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDRPKFS*PPLPCM
Trigger: CATGCAAGGGAGCGGGGGCCAGCTGAATTTCGGCCT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACAGAGTTTTTGGCGCTaGTCCCCTGTAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIQSFWR*SPVAGS
Trigger: GCTGCCTGCTACAGGGGACCAGCGCCAAAAACTCTG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAACCCCTTCCAGGTCATaGCTGTCGAGGCTGTCCACT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTITPSRS*LSRLST
Trigger: AGTGGACAGCCTCGACAGCCATGACCTGGAAGGGGT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGACAAGACAACAACAGTaGTGGGCCGGATCACTGTGC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWTRQQQ*WAGSLC
Trigger: GCACAGTGATCCGGCCCACCACTGTTGTTGTCTTGT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGAGTTCATCTGTGGCTaGGCTGCAGCCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDEFICG*AAAPGL
Trigger: AAGCCCAGGGGCTGCAGCCCAGCCACAGATGAACTC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGATAGGAGCCACTTGCTaGAGAGCTGCTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWIGATC*RAATGI
Trigger: AATTCCCGTAGCAGCTCTTCAGCAAGTGGCTCCTAT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACGGCTTAGGATCTGCTaGTGCATGTGGAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIRLRIC*CMWRET
Trigger: CGTCTCTCTCCACATGCATCAGCAGATCCTAAGCCG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGTGTGCCATTTCCTATaGGAGGAGAGACCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDVCHFL*EERPQG
Trigger: CCCCTGCGGTCTCTCCTCTCATAGGAAATGGCACAC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCCACTGGCTGCCTGTTaGGACAGTTCCCATACTGCG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHPLAAC*DSSHTA
Trigger: CGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGGTGCTCTTCAGCTTTaGGGCTTGAATCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHGALQL*GLNPGT
Trigger: GGTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCACCATGCTGCCAGCTaGCTCATTTGGCGCTACCGG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILHHAAS*LIWRYR
Trigger: CCGGTAGCGCCAAATGAGTCAGCTGGCAGCATGGTG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGCCCAAGCATCTGCTaGCCGGGGCGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRCPSIC*PGRPAP
Trigger: GGGGGCAGGCCGCCCCGGTCAGCAGATGCTTGGGCA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAACGCCCGAGGCGTGGTaGGGCGGGAGGAGCTATGGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVTPEAW*GGRSYG
Trigger: CCCATAGCTCCTCCCGCCTCACCACGCCTCGGGCGT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAACTGTGGAATGCCCTaGACTGAATTGGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWNCGMP*TELEMG
Trigger: CCCCATCTCCAATTCAGTTCAGGGCATTCCACAGTT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAACAGCCTTGGAGTGCTaGTTGGGCAACACCAACTGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTITALEC*LGNTNW
Trigger: CCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACGAATAGTGTCCCAACTTGGGATCGCTTCACTCTaGTTGTGTTGGCTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: GGPWRCQPPASTRIVSQLGIASL*LCWLSR
Trigger: ACGAGACAGCCAACACAATCAGAGTGAAGCGATCCC...AAGTTGGGACACTATTCGTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTCGGGTCACCAGTGCTaGTCACTGCAGACTCACTCG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHSGHQC*SLQTHS
Trigger: CGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGTGTTGCTGAGGTCCTaGTGCTCACCAAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILVLLRS*CSPRAP
Trigger: GGGAGCCCTTGGTGAGCAGCAGGACCTCAGCAACAC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGGACTGTTGGCTGCTaGATGAAGACTGACCACCAG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGTVGC*MKTDHQ
Trigger: CTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACATCCATTTGGTCCCTaGCGGGTTTCTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIHPFGP*RVSPGL
Trigger: CAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGGGCCCACCCAAGCTaGAGGTGTTGTTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDWAHPS*RCCWTV
Trigger: CACAGTCCAACAACACCTGCAGCTTGGGTGGGCCCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGCCCGTGGGGCACTTTaGTGTCGTCCGGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVARGAL*CRPGGR
Trigger: GCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACCAAAGGCGCGAGTCTaGGGCACAGCGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKPKARV*GTAGRG
Trigger: GCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACAGGCGTTTCCACTGGTaGCACTTCCGGGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHRRFHW*HFRGCC
Trigger: ACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAGCTTGACGGCTGGCTaGCCATGCCGTGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSLTAG*PCREPL
Trigger: CAGGGGCTCACGGCATGGGCAGCCAGCCGTCAAGCT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCTGAGCTGTCCTGACTaGAGAGCAAGGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHLSCPD*RARLSL
Trigger: GAGGGACAGCCTTGCTCTGCAGTCAGGACAGCTCAG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCTGAGCTGTCCTGACTaGAGAGCAAGGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDLSCPD*RARLSL
Trigger: GAGGGACAGCCTTGCTCTGCAGTCAGGACAGCTCAG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGGGCCGGATCACTGTaGATCCCTCCAGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDWAGSL*IPPGRT
Trigger: TGTCCTTCCTGGAGGGATGCACAGTGATCCGGCCCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCGCTCTCTGGCTGGTaGACACACAGCCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILALSGW*THSLGV
Trigger: CACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCGTGATCACGGGGAATaGAGGCTTGTCCGAGGAACG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHRDHGE*RLVRGT
Trigger: CGTTCCTCGGACAAGCCTGCATTCCCCGTGATCACG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAAGGGCCTCTGCGCTTCCAGCAATCCACGCCCCTCAGCATAATCCTGGGACTCCAACTTGGAAATCCTaGACCCCACGAGCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: ERASALPAIHAPQHNPGTPTWKS*TPRALN
Trigger: GTTTAGAGCTCGTGGGGTGCAGGATTTCCAAGTTGG...AGTCCCAGGATTATGCTGAGGGGCGTGGATTGCTGGAAGCGCAGAGGCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGTGGAGCTGTGGGACTaGGCCTCCATGATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIVELWD*ASMMSS
Trigger: AGAAGACATCATGGAGGCCCAGTCCCACAGCTCCAC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGTGGTCGTGGAGCTGTaGGACTGGGCCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILVVVEL*DWASMM
Trigger: CATCATGGAGGCCCAGTCCCACAGCTCCACGACCAC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATCTTTTCAGTGGTCGTaGAGCTGTGGGACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISFQWS*SCGTGP
Trigger: AGGCCCAGTCCCACAGCTCCACGACCACTGAAAAGA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCGGGCTCCGCCACGTGTaGCAGGGACCCATGGATCTC +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVGLRHV*QGPMDL
Trigger: GAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCC...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGGTTGCTGAGATCATaGAGAGCGATGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGLLRS*RAMGCC
Trigger: ACAGCAGCCCATCGCTCTCCATGATCTCAGCAACCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGATGATAGTATTCTGCTaGGCTGACTCCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWMIVFC*ADSCMG
Trigger: CCCCATGCAGGAGTCAGCCCAGCAGAATACTATCAT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTGACAGCCTGGGGCTaGAGAATCTGGTGCTATCCA +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTILTAWG*RIWCYP
Trigger: TGGATAGCACCAGATTCTCCAGCCCCAGGCTGTCAG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAATAGGCCTCTGTGTTaGAAAAGTTGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWNRPLC*KSWGRV
Trigger: CACCCTGCCCCAACTTTTCCAACACAGAGGCCTATT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCCCGAGCCCCTGGGCTaGGGAGGTCTTCATCGGGTT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINPEPLG*GGLHRV
Trigger: AACCCGATGAAGACCTCCCCAGCCCAGGGGCTCGGG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCTGCCGGGTTTCTCCTaGCTTGCAAAGCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHLPGFS*LAKQGL
Trigger: CAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCTGGCTGGCTTCGCTaGAGCGGCGCGAGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSGWLR*SGARRR
Trigger: CCGACGCCTCGCGCCGCTCCAGCGAAGCCAGCCAGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGGCCGTCGCTCTGGCTaGCTTCGCTGGAGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRGRRSG*LRWSGA
Trigger: CGCGCCGCTCCAGCGAAGCCAGCCAGAGCGACGGCC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGCAGGCCGTCGCTCTaGCTGGCTTCGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGRPSL*LASLER
Trigger: CCGCTCCAGCGAAGCCAGCCAGAGCGACGGCCTGCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATCCGCACCGGGTCGCTaGCCCTCCTCACGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKSAPGR*PSSRRG
Trigger: GCCACGGCGTGAGGAGGGCCAGCGACCCGGTGCGGA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAAGGGGTTCTGCGGGTaGACGACCATGCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILKGFCG*TTMPLQ
Trigger: CTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCTTCCGGGGCTGTTGTaGAGCATCAAGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDLPGLL*SIKCSG
Trigger: CCCAGAGCACTTGATGCTCCACAACAGCCCCGGAAG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGCACCAGGGGCCACTaGCTGCCTGTTGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHCTRGH*LPVETV
Trigger: AACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCCCAAAGCTGGCACATaGCTGGTAGCCCCTGACAAC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDPKAGT*LVAPDN
Trigger: GTTGTCAGGGGCTACCAGCCATGTGCCAGCTTTGGG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATGTTGGTGGTGCTCATaGACAGCGCTGGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTICWWCS*TALGMG
Trigger: TCCCATTCCCAGCGCTGTCCATGAGCACCACCAACA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TGGACAGAAGGATGGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACGAATGGGACTGGGCCTCCATaGTGTCTTCTCATTACTTCA +
Preference number: 4 (lower is better)
Translates to: WTEGWRAMAMSTTSQHTNGTGPP*CLLITS
Trigger: TGAAGTAATGAGAAGACATCATGGAGGCCCAGTCCC...ATTCGTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCCATCCTTCTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCCGGCGGTGGCAGCTaGGGGAATAATGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILAGGGS*GNNVCI
Trigger: TATGCAGACATTATTCCCTCAGCTGCCACCGCCGGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCGGCTCGGCCTGGCTaGCAGCCTGGGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSARPG*QPGAGE
Trigger: TTCTCCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCAGAAGGGCCGGAGCTaGCCTGGACGGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINQKGRS*PGRGSE
Trigger: TTCTGAACCCCGTCCAGGTCAGCTCCGGCCCTTCTG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGTCTTCATCGGGTTTaGTCTTGGACCTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGLHRV*SWTSCC
Trigger: ACAACAAGAGGTCCAAGATCAAACCCGATGAAGACC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGTGTGCCATTTCCTATaGGAGGAGAGACCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILVCHFL*EERPQG
Trigger: CCCCTGCGGTCTCTCCTCTCATAGGAAATGGCACAC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGCAGGGCGAGATCCCTaGGGAGCGGCGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKAGRDP*GAAAAQ
Trigger: CTGAGCAGCCGCCGCTCCTCAGGGATCTCGCCCTGC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTTCAGCTTTGAGGCTTaGATCCCGGCACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHFSFEA*IPAPQA
Trigger: TGCCTGTGGTGCCGGGATTCAAGCCTCAAAGCTGAA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGTAGATGTTGATGTGTaGGGTAGCACTAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWVDVDV*GSTNLP
Trigger: GGGCAGATTAGTGCTACCTCACACATCAACATCTAC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATCTGACTTGTGTCACTaGGCTGTCCTGACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISDLCH*AVLTAE
Trigger: CTCTGCAGTCAGGACAGCTCAGTGACACAAGTCAGA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCTTTCGTGTCTTGCTaGCTGAAGCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDAFVSC*LKPTVW
Trigger: CCAAACCGTGGGCTTCAGTCAGCAAGACACGAAAGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCTATGGGAAAGGTTCTaGATGATACTTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWLWERF*MILGLR
Trigger: CCTGAGCCCAAGTATCATTCAGAACCTTTCCCATAG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAACGCCCGAGGCGTGGTaGGGCGGGAGGAGCTATGGG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRTPEAW*GGRSYG
Trigger: CCCATAGCTCCTCCCGCCTCACCACGCCTCGGGCGT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTGCAGCCCCTGGGCTTaGGGTGGGCGTGATCACGGG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNCSPWA*GGRDHG
Trigger: CCCGTGATCACGCCCACCTCAAGCCCAGGGGCTGCA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATGCAGCCCCTGGGCTTaGGGTGGGCGTGATCACGGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVCSPWA*GGRDHG
Trigger: CCCGTGATCACGCCCACCTCAAGCCCAGGGGCTGCA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGGAGAGCGATGGGCTaGTGTGCAAGGAGCGGATAT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHWRAMG*CARSGY
Trigger: ATATCCGCTCCTTGCACAGCAGCCCATCGCTCTCCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGGAGAGCGATGGGCTaGTGTGCAAGGAGCGGATAT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDWRAMG*CARSGY
Trigger: ATATCCGCTCCTTGCACAGCAGCCCATCGCTCTCCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACACCAGTGCTGCTCACTaGAGACTCACTCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDTSAAH*RLTRGL
Trigger: AAGCCCACGAGTGAGTCTGCAGTGAGCAGCACTGGT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCGGGCTGTTCCTGCTaGCCCCGAGCCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSGCSC*PRAPGL
Trigger: CAGCCCAGGGGCTCGGGGGCAGCAGGAACAGCCCGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGCCTTGAGGCGGTACTaGTGGGCGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVALRRY*WAGVRL
Trigger: CAGCCTCACGCCCGCCCAGCAGTACCGCCTCAAGGC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGGGCTCCCCCGTCGCTaGACCTCCTCGGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVGLPRR*TSSGHE
Trigger: TTCATGCCCCGAGGAGGTGCAGCGACGGGGGAGCCC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCCCTCGGGGCAGGGCTaGTCGAGGGCATGGAACTGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNPSGQG*SRAWNC
Trigger: GCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCTCCTCAAGGGGTTCTaGGGGTGGACGACCATGCCG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINLLKGF*GWTTMP
Trigger: CGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAGGCGTTTCCACTGGTaGCACTTCCGGGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRRFHW*HFRGCC
Trigger: ACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGACAGTTCCCATACTaGGGGGCCTTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDRQFPY*GALQGC
Trigger: ACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATCCCTTGCATGGGGGTaGTCTTCAGCTTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISLAWG*SSALRL
Trigger: AAGCCTCAAAGCTGAAGAGCACCCCCATGCAAGGGA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACCTGCCCCCGGGTGCTaGATGCTGTCGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRPAPGC*MLSPRS
Trigger: GCTCCTCGGCGACAGCATGCAGCACCCGGGGGCAGG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCACAGCGGATGGGGCTaGCCTTTCATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHHSGWG*PFISIL
Trigger: CAAGATGGAGATGAAAGGGCAGCCCCATCCGCTGTG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAGACAGCCTCGACTCTaGTACCACCGTGCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRQPRL*YHRALS
Trigger: AGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACCATGTAACCATTCCTaGGGTCCATGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIPCNHS*GPWQTP
Trigger: CGGTGTTTGCCATGGACCCCAGGAATGGTTACATGG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGTGGGGTTCCGGTGTaGGGAGATCCTAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSGVPV*GDPNEG
Trigger: CCCTTCATTAGGATCTCCCCACACCGGAACCCCACT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACAGTGGGGTTCCGGTGTaGGGAGATCCTAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHSGVPV*GDPNEG
Trigger: CCCTTCATTAGGATCTCCCCACACCGGAACCCCACT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAACCGTAGGGATCCCTaGAATAGGCCTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTINRRDP*NRPLCW
Trigger: CCAACACAGAGGCCTATTCCAGGGATCCCTACGGTT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGCACAAGCTGCTCTTaGGTGTCGAACTCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILCTSCS*VSNSLA
Trigger: CGCGAGGGAGTTCGACACCCAAGAGCAGCTTGTGCA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGTGACATGAGCCTCTaGGCCATGCACTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGDMSL*AMHCLH
Trigger: GTGAAGACAGTGCATGGCCCAGAGGCTCATGTCACC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCGTGCTCCATCCATTTaGTCCCTGCCGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRAPSI*SLPGFS
Trigger: GGAGAAACCCGGCAGGGACCAAATGGATGGAGCACG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACCTCGGGGCATGAACTaGAGGCAGGGCCACGCCAGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVPRGMN*RQGHAR
Trigger: CCTGGCGTGGCCCTGCCTCCAGTTCATGCCCCGAGG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGCACCAGGGGCCACTaGCTGCCTGTTGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILCTRGH*LPVETV
Trigger: AACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGTCCCACTGGGTCCTaGTTCTGCATGCCATTCACC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHCPTGS*FCMPFT
Trigger: GGTGAATGGCATGCAGAACCAGGACCCAGTGGGACA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTTAGAGCACAGCGGATaGGGCTGCCCTTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDLEHSG*GCPFIS
Trigger: GGAGATGAAAGGGCAGCCCCATCCGCTGTGCTCTAA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGTTGGTGGTGCTCATaGACAGCGCTGGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDCWWCS*TALGMG
Trigger: TCCCATTCCCAGCGCTGTCCATGAGCACCACCAACA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAGCCAAAGTCCCCAGTaGCAAATCAACCTCCATGCG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISQSPQ*QINLHA
Trigger: CGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GATGGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACGAATAGTGTCCCAAGACCAAAAATGCCTCTaGCAGCTCAGCAATGTGAGG +
Preference number: 4 (lower is better)
Translates to: DGGPWRCQPPASTRIVSQDQKCL*QLSNVR
Trigger: CCTCACATTGCTGAGCTGCCAGAGGCATTTTTGGTC...TTGGGACACTATTCGTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR TCA 90 bp AAATCAGTGTGCCCAGATAGGCAGTGTCCAGGAACGAGGAAAACGGGCCAGCTCGGGACTGGGCCTCCATaGTGTCTTCTCATTACTTCA +
Preference number: 4 (lower is better)
Translates to: KSVCPDRQCPGTRKTGQLGTGPP*CLLITS
Trigger: TGAAGTAATGAGAAGACATCATGGAGGCCCAGTCCC...GAGCTGGCCCGTTTTCCTCGTTCCTGGACACTGCCTATCTGGGCACACTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCGGCTCGGCCTGGCTaGCAGCCTGGGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSARPG*QPGAGE
Trigger: TTCTCCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCGGCGCTTCCGGAGCTaGCTTCGTTCCACTGAATGG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINRRFRS*LRSTEW
Trigger: CCATTCAGTGGAACGAAGTCAGCTCCGGAAGCGCCG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGCCGCGGCCCACACTTaGGCTTGGAGGAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVAAAHT*AWRRTG
Trigger: ACCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGCCCAAGCATCTGCTaGCCGGGGCGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVCPSIC*PGRPAP
Trigger: GGGGGCAGGCCGCCCCGGTCAGCAGATGCTTGGGCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGTGCGAAACAGCACTaGATGTTCATGAAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWSAKQH*MFMKVV
Trigger: CACTACCTTCATGAACATTCAGTGCTGTTTCGCACT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGCAGCCCCTGGGCTTaGGGTGGGCGTGATCACGGG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRCSPWA*GGRDHG
Trigger: CCCGTGATCACGCCCACCTCAAGCCCAGGGGCTGCA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAAGGCGGAAGTCATATaGAATGGAGGAATCGGAGAT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWKAEVI*NGGIGD
Trigger: ATCTCCGATTCCTCCATTGCATATGACTTCCGCCTT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGCAGTCCAGCCACCTaGACACGAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSSPAT*TRTPSS
Trigger: AGAAGAAGGAGTTCGTGTGCAGGTGGCTGGACTGCT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTTGTTGCAACCTTCGTaGTCACAGACGTATGGTTTC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWLLQPS*SQTYGF
Trigger: GAAACCATACGTCTGTGAGCACGAAGGTTGCAACAA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGGGGGACTGTTGGCTaGTGCATGAAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILWGTVG*CMKTDH
Trigger: GTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGCCTTGAGGCGGTACTaGTGGGCGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRALRRY*WAGVRL
Trigger: CAGCCTCACGCCCGCCCAGCAGTACCGCCTCAAGGC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGCGCTGGGGAAGTGCTaGTCGTACCCTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINALGKC*SYPAWF
Trigger: GAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACCCTCGGGGCAGGGCTaGTCGAGGGCATGGAACTGC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRPSGQG*SRAWNC
Trigger: GCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGCAGGTCGGTTTTGCTaGCCTCGGGGCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNAGRFC*PRGRAA
Trigger: AGCAGCCCTGCCCCGAGGGCAGCAAAACCGACCTGC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATGGGCAGGTCGGTTTTaGTGCCCTCGGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVWAGRF*CPRGRA
Trigger: AGCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCCAGGGGCCACTGGCTaGCTGTTGAGACAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINPGATG*LLRQFP
Trigger: TGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAACAGGCACCGTCGAGTaGACCAGGGGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVTGTVE*TRGHWL
Trigger: CAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTGGCCCCCGCTCCCTTaGATGGGGGTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNWPPLP*MGVLFS
Trigger: GCTGAAGAGCACCCCCATGCAAGGGAGCGGGGGCCA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGCCATTCACCATGCTaGCAGCTGACTCATTTGGCG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHCHSPC*QLTHLA
Trigger: CGCCAAATGAGTCAGCTGGCAGCATGGTGAATGGCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACACTGGGTCCTGGTTCTaGATGCCATTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDTGSWF*MPFTML
Trigger: CAGCATGGTGAATGGCATGCAGAACCAGGACCCAGT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCTGACCGGGGCGGCCTaGCCCCGGGTGCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLTGAA*PRVLHA
Trigger: AGCATGCAGCACCCGGGGGCAGGCCGCCCCGGTCAG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCTGACCGGGGCGGCCTaGCCCCGGGTGCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVLTGAA*PRVLHA
Trigger: AGCATGCAGCACCCGGGGGCAGGCCGCCCCGGTCAG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGATTGCAGTGTCCCTCTaGTTGTCTCAGGAACATCTA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWIAVSL*LSQEHL
Trigger: TAGATGTTCCTGAGACAAGCAGAGGGACACTGCAAT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTTCCTTCCACTGGACTaGCACAACAGATCACTGAAA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWFLPLD*HNRSLK
Trigger: TTTCAGTGATCTGTTGTGGCAGTCCAGTGGAAGGAA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACACTCTGCTACCACCGTaGGCTCTCTGGCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINTLLPP*ALWLVH
Trigger: GTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGTGGTCGTGGAGCTGTaGGACTGGGCCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINVVVEL*DWASMM
Trigger: CATCATGGAGGCCCAGTCCCACAGCTCCACGACCAC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGGGCTCCGCCACGTGTaGCAGGGACCCATGGATCTC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVGLRHV*QGPMDL
Trigger: GAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGGCTCCGCCACGTGTaGCAGGGACCCATGGATCTC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGLRHV*QGPMDL
Trigger: GAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGCCCTCATGATGTCTaGCATCAATTGGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGPHDV*HQLVQE
Trigger: CTCCTGTACCAATTGATGCCAGACATCATGAGGGCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGGCAGGGTGGATGAGTaGAGGGCTGTGTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINGRVDE*RAVSKG
Trigger: GCCTTTGGACACAGCCCTCCACTCATCCACCCTGCC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCTGTGTTGGAAAAGTTaGGGCAGGGTGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHLCWKS*GRVDEW
Trigger: CCACTCATCCACCCTGCCCCAACTTTTCCAACACAG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAATAGGCCTCTGTGTTaGAAAAGTTGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTINRPLC*KSWGRV
Trigger: CACCCTGCCCCAACTTTTCCAACACAGAGGCCTATT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACCCGAGCCCCTGGGCTaGGGAGGTCTTCATCGGGTT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVPEPLG*GGLHRV
Trigger: AACCCGATGAAGACCTCCCCAGCCCAGGGGCTCGGG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCCCGAGCCCCTGGGCTaGGGAGGTCTTCATCGGGTT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNPEPLG*GGLHRV
Trigger: AACCCGATGAAGACCTCCCCAGCCCAGGGGCTCGGG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTTCTGTTTTGGTGTTTaGCGCGATCAGAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWFCFGV*RDQRHL
Trigger: CAAATGCCTCTGATCGCGCCAAACACCAAAACAGAA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGTGACATGAGCCTCTaGGCCATGCACTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGDMSL*AMHCLH
Trigger: GTGAAGACAGTGCATGGCCCAGAGGCTCATGTCACC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCTGACCACCAGGGCTTaGCTGAGATGTCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHLTTRA*LRCHWL
Trigger: AAGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCTGACCACCAGGGCTTaGCTGAGATGTCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDLTTRA*LRCHWL
Trigger: AAGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGCCGTCGCTCTGGCTaGCTTCGCTGGAGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGRRSG*LRWSGA
Trigger: CGCGCCGCTCCAGCGAAGCCAGCCAGAGCGACGGCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTTGAGGCGGTACTGCTaGGCGGGCGTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLRRYC*AGVRLS
Trigger: GCTCAGCCTCACGCCCGCCCAGCAGTACCGCCTCAA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCATCCTCTCCATGTTaGGCAGGGGCGTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSSSPC*AGASAA
Trigger: CGCCGCCGACGCCCCTGCCCAACATGGAGAGGATGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACCTCGGGGCATGAACTaGAGGCAGGGCCACGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRPRGMN*RQGHAR
Trigger: CCTGGCGTGGCCCTGCCTCCAGTTCATGCCCCGAGG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACCTCGGGGCATGAACTaGAGGCAGGGCCACGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKPRGMN*RQGHAR
Trigger: CCTGGCGTGGCCCTGCCTCCAGTTCATGCCCCGAGG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCCTCATCGTTCAGGTTaGCATCAGCGTCCATGGTCA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHPHRSG*HQRPWS
Trigger: TGACCATGGACGCTGATGCCAACCTGAACGATGAGG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGCCAGCGTGGCTGTCTaGCAGCCCGGGCGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRASVAV*QPGRVK
Trigger: TTTGACGCGCCCGGGCTGCCAGACAGCCACGCTGGC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGCCAGCGTGGCTGTCTaGCAGCCCGGGCGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKASVAV*QPGRVK
Trigger: TTTGACGCGCCCGGGCTGCCAGACAGCCACGCTGGC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATTACAGGGCTGTTCATaGAAGGCGTTTCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTILQGCS*KAFPLV
Trigger: CACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCCCTCGGCATAGCCTaGCGCCTGCTGCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSLGIA*RLLPPK
Trigger: CTTTGGGGGCAGCAGGCGCCAGGCTATGCCGAGGGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCCCCCGACATCAGGCTaGAGTGGTCCCCATCGTCTA +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINPPTSG*SGPHRL
Trigger: TAGACGATGGGGACCACTCCAGCCTGATGTCGGGGG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTGTATCAAATGCACGTaGGGAGTAGCTGCACTTCAA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWCIKCT*GVAALQ
Trigger: TTGAAGTGCAGCTACTCCCCACGTGCATTTGATACA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGGAGAACAGCAGGCATaGAAGGGGAATTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHGEQQA*KGNCSV
Trigger: GACACTGCAATTCCCCTTCCATGCCTGCTGTTCTCC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGACAACAACAGTGGTaGGCCGGATCACTGTGCATC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDRQQQW*AGSLCI
Trigger: GATGCACAGTGATCCGGCCCACCACTGTTGTTGTCT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACACAAGACAACAACAGTaGTGGGCCGGATCACTGTGC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDTRQQQ*WAGSLC
Trigger: GCACAGTGATCCGGCCCACCACTGTTGTTGTCTTGT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGTGCACACACAGCCTTaGAGTGCTGATTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHVHTQP*SADWAT
Trigger: TGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCAC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGAGTTCATCTGTGGCTaGGCTGCAGCCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINEFICG*AAAPGL
Trigger: AAGCCCAGGGGCTGCAGCCCAGCCACAGATGAACTC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAGTATTCTGCTGGGCTaGCTCCTGCATGGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSILLG*LLHGAH
Trigger: ATGCGCCCCATGCAGGAGTCAGCCCAGCAGAATACT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGCGATCAGAGGCATTTaGGAAAGCCTTGTTGCAACC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHAIRGI*ESLVAT
Trigger: GGTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCATTCTTCCCGCTTTaGGGTAGTGTTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILAFFPL*GSVAEV
Trigger: GACCTCAGCAACACTACCTCAAAGCGGGAAGAATGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGTTGGAATAGTTGCTaGTGGGGGACTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILCWNSC*WGTVGC
Trigger: GCAGCCAACAGTCCCCCATCAGCAACTATTCCAACA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATTTCATCGATGGCACTaGGGTCTCCTATACTACCTC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIFHRWH*GLLYYL
Trigger: GAGGTAGTATAGGAGACCTCAGTGCCATCGATGAAA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGCAGGGCGAGATCCCTaGGGAGCGGCGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNAGRDP*GAAAAQ
Trigger: CTGAGCAGCCGCCGCTCCTCAGGGATCTCGCCCTGC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCTGACTTCGTTCCACTaGATGGGCAGGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILLTSFH*MGRSVL
Trigger: CAAAACCGACCTGCCCATTCAGTGGAACGAAGTCAG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGCCGCGGCCCACACTTaGGCTTGGAGGAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRAAAHT*AWRRTG
Trigger: ACCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGCCCAAGCATCTGCTaGCCGGGGCGGCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCPSIC*PGRPAP
Trigger: GGGGGCAGGCCGCCCCGGTCAGCAGATGCTTGGGCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGGCTGCCCATGCCGTaGGCCCCTGGCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVWLPMP*APGRQL
Trigger: GAGCTGCCTGCCAGGGGCTCACGGCATGGGCAGCCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGGCTGCCCATGCCGTaGGCCCCTGGCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNWLPMP*APGRQL
Trigger: GAGCTGCCTGCCAGGGGCTCACGGCATGGGCAGCCA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGACAACTGCCAAGCTTaGCGGCTGGCTGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVDNCQA*RLAAHA
Trigger: GGCATGGGCAGCCAGCCGTCAAGCTTGGCAGTTGTC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTCTGACTTGTGTCACTaGGCTGTCCTGACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILSDLCH*AVLTAE
Trigger: CTCTGCAGTCAGGACAGCTCAGTGACACAAGTCAGA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTATGGGAAAGGTTCTaGATGATACTTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTILWERF*MILGLR
Trigger: CCTGAGCCCAAGTATCATTCAGAACCTTTCCCATAG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTACGCCCGAGGCGTGGTaGGGCGGGAGGAGCTATGGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVTPEAW*GGRSYG
Trigger: CCCATAGCTCCTCCCGCCTCACCACGCCTCGGGCGT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAACTGTGGAATGCCCTaGACTGAATTGGAGATGGGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDNCGMP*TELEMG
Trigger: CCCCATCTCCAATTCAGTTCAGGGCATTCCACAGTT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGTGAGACTGGATCTCTaGTTCTGTGACAACATTATG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWVRLDL*FCDNIM
Trigger: CATAATGTTGTCACAGAATCAGAGATCCAGTCTCAC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGGGCCAGTCACATCTaGACGCTATGCCTACAATAC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHWASHI*TLCLQY
Trigger: GTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCCTTCCCTACCCAGTACAGTCAGCAAAGCACACTCATGAAACCGGGTGAAGAAGTGAAGAAGTGCAGGTaGGAAGCACAGGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SFPTQYSQQSTLMKPGEEVKKCR*EAQALS
Trigger: GCTGAGAGCCTGTGCTTCTCACCTGCACTTCTTCAC...TTCTTCACCCGGTTTCATGAGTGTGCTTTGCTGACTGTACTGGGTAGGGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCGGGCTGTTCCTGCTaGCCCCGAGCCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSGCSC*PRAPGL
Trigger: CAGCCCAGGGGCTCGGGGGCAGCAGGAACAGCCCGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCCTTCGGGCTGTTCCTaGTGCCCCCGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVPSGCS*CPRAPG
Trigger: CCCAGGGGCTCGGGGGCAGCAGGAACAGCCCGAAGG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCTTTGAAGGGTTTCTaGTCTCTTGAGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDALKGF*SLEQSS
Trigger: GCTGGACTGCTCAAGAGAGCAGAAACCCTTCAAAGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGGGAATTTAAATACTaGACCACGTCGTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHWEFKY*TTSSGR
Trigger: CCTGCCGGACGACGTGGTGCAGTATTTAAATTCCCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAGGGCGCTGGGGAAGTaGTGCTCGTACCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVRALGK*CSYPAW
Trigger: CCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCAAAGGCGCGAGTCTaGGGCACAGCGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPKARV*GTAGRG
Trigger: GCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGCCACCGTAGGGGTTaGTGTTCTCCCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGHRRG*CSPRGS
Trigger: AGACCCTCGGGGAGAACAGCAACCCCTACGGTGGCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATGGCCCCCGCTCCCTTaGATGGGGGTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKWPPLP*MGVLFS
Trigger: GCTGAAGAGCACCCCCATGCAAGGGAGCGGGGGCCA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGGCCCCCGCTCCCTTaGATGGGGGTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRWPPLP*MGVLFS
Trigger: GCTGAAGAGCACCCCCATGCAAGGGAGCGGGGGCCA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGCATGCCATTCACCATaGTGCCAGCTGACTCATTTG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHACHSP*CQLTHL
Trigger: CAAATGAGTCAGCTGGCAGCATGGTGAATGGCATGC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTACTGGGTCCTGGTTCTaGATGCCATTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILTGSWF*MPFTML
Trigger: CAGCATGGTGAATGGCATGCAGAACCAGGACCCAGT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCCTGCCCCCGGGTGCTaGATGCTGTCGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNPAPGC*MLSPRS
Trigger: GCTCCTCGGCGACAGCATGCAGCACCCGGGGGCAGG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGACCGGGGCGGCCTaGCCCCGGGTGCTGCATGCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLTGAA*PRVLHA
Trigger: AGCATGCAGCACCCGGGGGCAGGCCGCCCCGGTCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAAGCTTGACGGCTGGCTaGCCATGCCGTGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSLTAG*PCREPL
Trigger: CAGGGGCTCACGGCATGGGCAGCCAGCCGTCAAGCT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCGTGATCACGGGGAATaGAGGCTTGTCCGAGGAACG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINRDHGE*RLVRGT
Trigger: CGTTCCTCGGACAAGCCTGCATTCCCCGTGATCACG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAGAGGCAGCAGGTGACCAGGTTGCAGAAGAAAGGGCCTCTGCGCTTCCAGCAATCACATCTGTTCGAGTaGAGCACTTCACTATGGAAT +
Preference number: 4 (lower is better)
Translates to: QRQQVTRLQKKGPLRFQQSHLFE*STSLWN
Trigger: ATTCCATAGTGAAGTGCTCCACTCGAACAGATGTGA...TTGCTGGAAGCGCAGAGGCCCTTTCTTCTGCAACCTGGTCACCTGCTGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR CCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGGGGCTCCGCCACGTGTaGCAGGGACCCATGGATCTC +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVEGLRHV*QGPMDL
Trigger: GAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCC...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGCCCTCATGATGTCTaGCATCAATTGGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGPHDV*HQLVQE
Trigger: CTCCTGTACCAATTGATGCCAGACATCATGAGGGCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGGAGGAATCGGAGATaGATCGTAATGGTAACGGCC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDWRNRR*IVMVTA
Trigger: GGCCGTTACCATTACGATCCATCTCCGATTCCTCCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGCCTGGCTGACAGCCTaGGGCTGGAGAATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNAWLTA*GWRIWC
Trigger: GCACCAGATTCTCCAGCCCCAGGCTGTCAGCCAGGC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGTTTTCGGCTCGGCCTaGCTGACAGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKVFGSA*LTAWGW
Trigger: CCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGAAAAC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCGGAGAGTGGTGATATaGACAGTGTACGTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDRRVVI*TVYVFG
Trigger: GCCGAAAACGTACACTGTCCATATCACCACTCTCCG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAACCGTAGGGATCCCTaGAATAGGCCTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILNRRDP*NRPLCW
Trigger: CCAACACAGAGGCCTATTCCAGGGATCCCTACGGTT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACCCGAGCCCCTGGGCTaGGGAGGTCTTCATCGGGTT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRPEPLG*GGLHRV
Trigger: AACCCGATGAAGACCTCCCCAGCCCAGGGGCTCGGG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTGCACAAGCTGCTCTTaGGTGTCGAACTCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINCTSCS*VSNSLA
Trigger: CGCGAGGGAGTTCGACACCCAAGAGCAGCTTGTGCA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTGGTCGTTATTTATATaGTGCACAAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWWSLFI*CTSCSW
Trigger: CCAAGAGCAGCTTGTGCACCATATAAATAACGACCA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGGAATCTCTCGGGGGTaGCGGCCGAGGATGGATGTC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVGISRG*RPRMDV
Trigger: GACATCCATCCTCGGCCGCCACCCCCGAGAGATTCC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATTGACGGTTTTCACCTaGAGGCATTCTTCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTILTVFT*RHSSRF
Trigger: AAAGCGGGAAGAATGCCTCCAGGTGAAAACCGTCAA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCTGACCACCAGGGCTTaGCTGAGATGTCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILLTTRA*LRCHWL
Trigger: AAGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACCGGGAGAAGCGTCATaGGCCCACCCAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKPGEAS*AHPSCR
Trigger: CCTGCAGCTTGGGTGGGCCCATGACGCTTCTCCCGG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCCGTCGCTCTGGCTaGCTTCGCTGGAGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGRRSG*LRWSGA
Trigger: CGCGCCGCTCCAGCGAAGCCAGCCAGAGCGACGGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATTGAGGCGGTACTGCTaGGCGGGCGTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLRRYC*AGVRLS
Trigger: GCTCAGCCTCACGCCCGCCCAGCAGTACCGCCTCAA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCCGCACCGGGTCGCTaGCCCTCCTCACGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSAPGR*PSSRRG
Trigger: GCCACGGCGTGAGGAGGGCCAGCGACCCGGTGCGGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGACAGGGGGACGAGTaGAAGTTTCGGGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGQGDE*KFRDWP
Trigger: CGGCCAGTCCCGAAACTTCCACTCGTCCCCCTGTCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACAGGGCATGGAACTGCTaGCCAGCGTGGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNRAWNC*PAWLSG
Trigger: GCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGAGCATCAAGTGCTCTaGGCCACCGTAGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINEHQVL*ATVGVA
Trigger: AGCAACCCCTACGGTGGCCCAGAGCACTTGATGCTC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATCCCTCGGCATAGCCTaGCGCCTGCTGCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKSLGIA*RLLPPK
Trigger: CTTTGGGGGCAGCAGGCGCCAGGCTATGCCGAGGGA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGCTCATGGACAGCGCTaGGAATGGGAGGGACGCCCG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKAHGQR*EWEGRP
Trigger: CGGGCGTCCCTCCCATTCCCAGCGCTGTCCATGAGC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGGAAGTGTAACCCCTTaGTCACAAGCACACCAACTC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHGSVTP*SQAHQL
Trigger: GAGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAGCCAAAGTCCCCAGTaGCAAATCAACCTCCATGCG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILSQSPQ*QINLHA
Trigger: CGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCAATGTGTGAGGAGTTaGGAGGGGTTAACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWQCVRS*EGLTFS
Trigger: TGAAAAAGTTAACCCCTCCCAACTCCTCACACATTG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACAGCCCACGGGTTGCTaGGATCATGGAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVQPTGC*DHGERW
Trigger: CCATCGCTCTCCATGATCTCAGCAACCCGTGGGCTG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAATGATCGGAGAGTGGTaGTATGGACAGTGTACGTTT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIMIGEW*YGQCTF
Trigger: AAACGTACACTGTCCATATCACCACTCTCCGATCAT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAGTTTGTCTCATAGATaGCTTCAGGCTCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISLSHR*LQAPVC
Trigger: GCAAACAGGAGCCTGAAGTCATCTATGAGACAAACT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAACATATACTGGGCTTTaGAGGGTTTCTGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTITYTGL*RVSALL
Trigger: CAAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCGATCAGAGGCATTTaGGAAAGCCTTGTTGCAACC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILAIRGI*ESLVAT
Trigger: GGTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCACCAAGGGCTCCCTaGGTCGGTCGGCCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSPRAP*VGRPGD
Trigger: GTCGCCTGGCCGACCGACTCAGGGAGCCCTTGGTGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCCACCAGGGCTTGGCTaGGATGTCATTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINPPGLG*DVIGFS
Trigger: AGAGAAGCCAATGACATCTCAGCCAAGCCCTGGTGG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCAGGTAGGCCGAGCTaGTGGTGCTGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSGRPS*WCWRCC
Trigger: ACAGCAGCGCCAGCACCATCAGCTCGGCCTACCTGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATCAGGTAGGCCGAGCTaGTGGTGCTGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKSGRPS*WCWRCC
Trigger: ACAGCAGCGCCAGCACCATCAGCTCGGCCTACCTGA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCAGGGCGAGATCCCTaGGGAGCGGCGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAGRDP*GAAAAQ
Trigger: CTGAGCAGCCGCCGCTCCTCAGGGATCTCGCCCTGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCACCTCCTCGGGGCATaGACTGGAGGCAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVHLLGA*TGGRAT
Trigger: CGTGGCCCTGCCTCCAGTTCATGCCCCGAGGAGGTG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCGGCGCTTCCGGAGCTaGCTTCGTTCCACTGAATGG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNRRFRS*LRSTEW
Trigger: CCATTCAGTGGAACGAAGTCAGCTCCGGAAGCGCCG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACACCATGCTGCCAGCTaGCTCATTTGGCGCTACCGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVHHAAS*LIWRYR
Trigger: CCGGTAGCGCCAAATGAGTCAGCTGGCAGCATGGTG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCGCCGAGGAGCTGGTaGGCCAGGTACCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSPRSW*ARYPCP
Trigger: GGGACAGGGGTACCTGGCTCACCAGCTCCTCGGCGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGTAGATGTTGATGTGTaGGGTAGCACTAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHVDVDV*GSTNLP
Trigger: GGGCAGATTAGTGCTACCTCACACATCAACATCTAC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGTAGATGTTGATGTGTaGGGTAGCACTAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDVDVDV*GSTNLP
Trigger: GGGCAGATTAGTGCTACCTCACACATCAACATCTAC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGCTGCCCATGCCGTaGGCCCCTGGCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWLPMP*APGRQL
Trigger: GAGCTGCCTGCCAGGGGCTCACGGCATGGGCAGCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGCTTTCGTGTCTTGCTaGCTGAAGCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINAFVSC*LKPTVW
Trigger: CCAAACCGTGGGCTTCAGTCAGCAAGACACGAAAGC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACGCCCGAGGCGTGGTaGGGCGGGAGGAGCTATGGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTPEAW*GGRSYG
Trigger: CCCATAGCTCCTCCCGCCTCACCACGCCTCGGGCGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGATTAATAAATGTTACTaGTACAGCCGCTTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWINKCY*YSRLWG
Trigger: ACCCCACAAGCGGCTGTATCAGTAACATTTATTAAT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACACAGCCTTGGAGTGCTaGTTGGGCAACACCAACTGG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINTALEC*LGNTNW
Trigger: CCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGCTTGAGGTGGGCGTaGTCACGGGGAATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGLRWA*SRGMQA
Trigger: AGCCTGCATTCCCCGTGATCACGCCCACCTCAAGCC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AAATCAGTGTGCCCAGATAGGCAGTGTCCAGGAACGAGGAAAACGGGCCAGCTCTCAACACTCCATGCTTaGACTGAAATGCCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: KSVCPDRQCPGTRKTGQLSTLHA*TEMPLN
Trigger: GTTGAGAGGCATTTCAGTTCAAGCATGGAGTGTTGA...GAGCTGGCCCGTTTTCCTCGTTCCTGGACACTGCCTATCTGGGCACACTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR TCA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGATCTCAGGCAAGCAGGTaGCCAGGTGGTAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRSQASR*PGGSGA
Trigger: AGCCCCACTACCACCTGGTCACCTGCTTGCCTGAGA...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTGGAGAGCGATGGGCTaGTGTGCAAGGAGCGGATAT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINWRAMG*CARSGY
Trigger: ATATCCGCTCCTTGCACAGCAGCCCATCGCTCTCCA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTGCTGGGCTGACTCCTaGATGGGGCGCATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNCWADS*MGRICR
Trigger: CCTACAGATGCGCCCCATGCAGGAGTCAGCCCAGCA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCTGATGATAGTATTCTaGTGGGCTGACTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDLMIVF*WADSCM
Trigger: CATGCAGGAGTCAGCCCAGCAGAATACTATCATCAG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATGTCTGCATAGGGGCTaGGCTGGCCAGTTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVCLHRG*AGQLAG
Trigger: CCCTGCTAACTGGCCAGCGCAGCCCCTATGCAGACA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGTGGATGGCCCCCGTaGCGGCGGTGGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCGWPP*RRWQLR
Trigger: CCTCAGCTGCCACCGCCGGCACGGGGGCCATCCACA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCGGGCTGTTCCTGCTaGCCCCGAGCCCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSGCSC*PRAPGL
Trigger: CAGCCCAGGGGCTCGGGGGCAGCAGGAACAGCCCGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCTTCGGGCTGTTCCTaGTGCCCCCGAGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPSGCS*CPRAPG
Trigger: CCCAGGGGCTCGGGGGCAGCAGGAACAGCCCGAAGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCCACGCTCACGTTCTaGGGCCGGCCCTCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSATLTF*GRPSAC
Trigger: ACAGGCCGAGGGCCGGCCGCAGAACGTGAGCGTGGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCTGAAGCACGAGACTaGGCTTCTCCGCGGACGTGG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSEARD*ASPRTW
Trigger: CCACGTCCGCGGAGAAGCGCAGTCTCGTGCTTCAGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGCGCTGGGGAAGTGCTaGTCGTACCCTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVALGKC*SYPAWF
Trigger: GAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAAGGGCGCTGGGGAAGTaGTGCTCGTACCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKRALGK*CSYPAW
Trigger: CCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCCCGTGGGGCACTTTaGTGTCGTCCGGGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSARGAL*CRPGGR
Trigger: GCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCGAGGGCATGGAACTaGTGGCCAGCGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSRAWN*WPAWLS
Trigger: AGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCGAGGGCATGGAACTaGTGGCCAGCGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSRAWN*WPAWLS
Trigger: AGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACTCCTCAAGGGGTTCTaGGGGTGGACGACCATGCCG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLLKGF*GWTTMP
Trigger: CGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGCCACCGTAGGGGTTaGTGTTCTCCCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGHRRG*CSPRGS
Trigger: AGACCCTCGGGGAGAACAGCAACCCCTACGGTGGCC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCATGCCATTCACCATaGTGCCAGCTGACTCATTTG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILACHSP*CQLTHL
Trigger: CAAATGAGTCAGCTGGCAGCATGGTGAATGGCATGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCCCCCGGGTGCTGCATaGTGTCGCCGAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNPPGAA*CRRGAG
Trigger: ACCAGCTCCTCGGCGACAGCATGCAGCACCCGGGGG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCTGCCCCCGGGTGCTaGATGCTGTCGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPAPGC*MLSPRS
Trigger: GCTCCTCGGCGACAGCATGCAGCACCCGGGGGCAGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCACAGCGGATGGGGCTaGCCTTTCATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINHSGWG*PFISIL
Trigger: CAAGATGGAGATGAAAGGGCAGCCCCATCCGCTGTG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAATTGCAGTGTCCCTCTaGTTGTCTCAGGAACATCTA +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIIAVSL*LSQEHL
Trigger: TAGATGTTCCTGAGACAAGCAGAGGGACACTGCAAT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGCGCTCTCTGGCTGGTaGACACACAGCCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNALSGW*THSLGV
Trigger: CACTCCAAGGCTGTGTGTGCACCAGCCAGAGAGCGC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACACTCTGCTACCACCGTaGGCTCTCTGGCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNTLLPP*ALWLVH
Trigger: GTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAACTCTGCTACCACCGTaGGCTCTCTGGCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVTLLPP*ALWLVH
Trigger: GTGCACCAGCCAGAGAGCGCACGGTGGTAGCAGAGT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGGTTGGAGGAGACTGCTGTCCTGTCACTAATTTTGACAAGACAACTTTTGTGTGTGGTCGTGGAGCTGTaGGACTGGGCCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: GLEETAVLSLILTRQLLCVVVEL*DWASMM
Trigger: CATCATGGAGGCCCAGTCCCACAGCTCCACGACCAC...ACACAAAAGTTGTCTTGTCAAAATTAGTGACAGGACAGCAGTCTCCTCCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCATTCCTGGGGTCCATaGCAAACACCGTCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNHSWGP*QTPSRG
Trigger: ACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGGCTGACTCCTGCATaGGGCGCATCTGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGLTPA*GASVGL
Trigger: GAGCCCTACAGATGCGCCCCATGCAGGAGTCAGCCC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATATTCCATGTGGATaGCCCCCGTGCCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKDIPCG*PPCRRW
Trigger: CCACCGCCGGCACGGGGGCCATCCACATGGAATATC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCGGAGAGTGGTGATATaGACAGTGTACGTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRRVVI*TVYVFG
Trigger: GCCGAAAACGTACACTGTCCATATCACCACTCTCCG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGCAGGGTGGATGAGTaGAGGGCTGTGTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGRVDE*RAVSKG
Trigger: GCCTTTGGACACAGCCCTCCACTCATCCACCCTGCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGAATGCGTTCTGTTTTaGTGTTTGGCGCGATCAGAG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDECVLF*CLARSE
Trigger: CTCTGATCGCGCCAAACACCAAAACAGAACGCATTC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACACGCTTAGTGCAGCCTaGGATTTTGCACACATATGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDTLSAA*DFAHIW
Trigger: CCATATGTGTGCAAAATCCCAGGCTGCACTAAGCGT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGGTGACATGAGCCTCTaGGCCATGCACTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINGDMSL*AMHCLH
Trigger: GTGAAGACAGTGCATGGCCCAGAGGCTCATGTCACC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCTGGCTGGCTTCGCTaGAGCGGCGCGAGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSGWLR*SGARRR
Trigger: CCGACGCCTCGCGCCGCTCCAGCGAAGCCAGCCAGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCAGGCCGTCGCTCTaGCTGGCTTCGCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGRPSL*LASLER
Trigger: CCGCTCCAGCGAAGCCAGCCAGAGCGACGGCCTGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGGAAGTTTCGGGACTaGCCGCCCTCGGGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNWKFRD*PPSGRV
Trigger: CACGCGGCCCGAGGGCGGCCAGTCCCGAAACTTCCA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAAAGTCACCGGGCCCGTaGGGCACTTTGCTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKKSPGP*GTLLSS
Trigger: GGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAAAGTCACCGGGCCCGTaGGGCACTTTGCTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRKSPGP*GTLLSS
Trigger: GGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGGAAGGCGTTTCCACTaGTGCCACTTCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVGRRFH*CHFRGC
Trigger: ACAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACAGGCCGAAATTCAGCTaGCCCCCGCTCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNRPKFS*PPLPCM
Trigger: CATGCAAGGGAGCGGGGGCCAGCTGAATTTCGGCCT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAGGCCGAAATTCAGCTaGCCCCCGCTCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVRPKFS*PPLPCM
Trigger: CATGCAAGGGAGCGGGGGCCAGCTGAATTTCGGCCT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGTACCCCTGTCCCACTaGGTCCTGGTTCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVVPLSH*VLVLHA
Trigger: GGCATGCAGAACCAGGACCCAGTGGGACAGGGGTAC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGAAGTGTAACCCCTTaGTCACAAGCACACCAACTC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGSVTP*SQAHQL
Trigger: GAGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAATTCCAGGGGTCAATaGGACAGAATACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTINSRGQ*DRIQQV
Trigger: TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGATGGTAACTGAGAAATaGAGGTTGCATCCGAGAATA +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWMVTEK*RLHPRI
Trigger: TATTCTCGGATGCAACCTCCATTTCTCAGTTACCAT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCACAGTCCCCAGGCTCTaGCTAGCTACTTTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVTVPRL*LATLRQ
Trigger: TTGGCGCAAAGTAGCTAGCCAGAGCCTGGGGACTGT...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCATGGATCTCTTTCTTaGTCAATGAGGCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILHGSLS*SMRPSR
Trigger: ACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACAGCCCACGGGTTGCTaGGATCATGGAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKQPTGC*DHGERW
Trigger: CCATCGCTCTCCATGATCTCAGCAACCCGTGGGCTG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAGTATTCTGCTGGGCTaGCTCCTGCATGGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSILLG*LLHGAH
Trigger: ATGCGCCCCATGCAGGAGTCAGCCCAGCAGAATACT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGTGCTATCCATAGCATaGAGATATTCCATGTGGATG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIVLSIA*RYSMWM
Trigger: CATCCACATGGAATATCTTCATGCTATGGATAGCAC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCGGCTCGGCCTGGCTaGCAGCCTGGGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSARPG*QPGAGE
Trigger: TTCTCCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACATGATCGGAGAGTGGTaGTATGGACAGTGTACGTTT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHMIGEW*YGQCTF
Trigger: AAACGTACACTGTCCATATCACCACTCTCCGATCAT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACGTGGGCTTGTTCTGTaGGGACTCAGAAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRRGLVL*GLRRAG
Trigger: TCCGGCCCTTCTGAGTCCTCACAGAACAAGCCCACG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGGGTTTCTGCTCTCTTaGGCAGTCCAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVGFLLS*AVQPPA
Trigger: TGCAGGTGGCTGGACTGCTCAAGAGAGCAGAAACCC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACACATATACTGGGCTTTaGAGGGTTTCTGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDTYTGL*RVSALL
Trigger: CAAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCACCAAGGGCTCCCTaGGTCGGTCGGCCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSPRAP*VGRPGD
Trigger: GTCGCCTGGCCGACCGACTCAGGGAGCCCTTGGTGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAATGGTTGAGTCCATaGTTGGGGTTTCATCGATGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDKWLSP*LGFHRW
Trigger: CCATCGATGAAACCCCAATCATGGACTCAACCATTT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCACCTCCTCGGGGCATaGACTGGAGGCAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSHLLGA*TGGRAT
Trigger: CGTGGCCCTGCCTCCAGTTCATGCCCCGAGGAGGTG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGGTGCTCTTCAGCTTTaGGGCTTGAATCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVGALQL*GLNPGT
Trigger: GGTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCGCCGAGGAGCTGGTaGGCCAGGTACCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSPRSW*ARYPCP
Trigger: GGGACAGGGGTACCTGGCTCACCAGCTCCTCGGCGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGGCTGCCCATGCCGTaGGCCCCTGGCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFWLPMP*APGRQL
Trigger: GAGCTGCCTGCCAGGGGCTCACGGCATGGGCAGCCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACATGGCTGGTAGCCCCTaGCAACTGCCAAGCTTGACG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNMAGSP*QLPSLT
Trigger: CGTCAAGCTTGGCAGTTGTCAGGGGCTACCAGCCAT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCTTTCATCTCCATCTTaGTACCATTCACCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILLSSPS*YHSPCR
Trigger: CCTGCAGGGTGAATGGTATCAAGATGGAGATGAAAG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTACGCCCGAGGCGTGGTaGGGCGGGAGGAGCTATGGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFTPEAW*GGRSYG
Trigger: CCCATAGCTCCTCCCGCCTCACCACGCCTCGGGCGT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTCAATAGACAGGGTGTaGAAAAAGGCATCCACACAG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHSIDRV*KKASTQ
Trigger: CTGTGTGGATGCCTTTTTTCACACCCTGTCTATTGA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACAGCCAAACATTGAGCTaGAACTTGCATCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHSQTLS*NLHLLQ
Trigger: TTGCAGGAGATGCAAGTTTCAGCTCAATGTTTGGCT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCTTGGAGGCTGGGGGTaGGTCTCAAGATATGAGATG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINLGGWG*VSRYEM
Trigger: CATCTCATATCTTGAGACTCACCCCCAGCCTCCAAG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACGACCAAAAATGCCCTaGGGCGGCAGCGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRRPKMP*GGSGCQ
Trigger: TTGACAGCCGCTGCCGCCGCAGGGCATTTTTGGTCG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395925.8
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACAAGGCGGAAGTCATATaGAATGGAGGAATCGGAGAT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHKAEVI*NGGIGD
Trigger: ATCTCCGATTCCTCCATTGCATATGACTTCCGCCTT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGTCTGCATAGGGGCTaGGCTGGCCAGTTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRCLHRG*AGQLAG
Trigger: CCCTGCTAACTGGCCAGCGCAGCCCCTATGCAGACA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCGGGTCACCAGTGCTaGTCACTGCAGACTCACTCG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSGHQC*SLQTHS
Trigger: CGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTTGGACCTCTTGTTGTaGATCGGGTCACCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINLDLLL*IGSPVL
Trigger: CAGCACTGGTGACCCGATGCACAACAAGAGGTCCAA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAGCAGTCCAGCCACCTaGACACGAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSSPAT*TRTPSS
Trigger: AGAAGAAGGAGTTCGTGTGCAGGTGGCTGGACTGCT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTTGAGAAAGCCTTGTTaGAACCTTCGTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHLRKPC*NLRAHR
Trigger: TCTGTGAGCACGAAGGTTGCAACAAGGCTTTCTCAA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTGGACTGTGAATGGCTaGCGGAATCTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNWTVNG*RNLSGV
Trigger: CACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGTGTTGCTGAGGTCCTaGTGCTCACCAAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKVLLRS*CSPRAP
Trigger: GGGAGCCCTTGGTGAGCAGCAGGACCTCAGCAACAC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATGGGCCCACCCAAGCTaGAGGTGTTGTTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVWAHPS*RCCWTV
Trigger: CACAGTCCAACAACACCTGCAGCTTGGGTGGGCCCA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACAGAGAGGTCGCTTCTaGCCGGGAGAAGCGTCATGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKQRGRF*PGEASW
Trigger: CCATGACGCTTCTCCCGGGCAGAAGCGACCTCTCTG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGCCACGCTCACGTTCTaGGGCCGGCCCTCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFATLTF*GRPSAC
Trigger: ACAGGCCGAGGGCCGGCCGCAGAACGTGAGCGTGGC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCCTTGAGGCGGTACTaGTGGGCGGGCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSALRRY*WAGVRL
Trigger: CAGCCTCACGCCCGCCCAGCAGTACCGCCTCAAGGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGGCTCCCCCGTCGCTaGACCTCCTCGGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGLPRR*TSSGHE
Trigger: TTCATGCCCCGAGGAGGTGCAGCGACGGGGGAGCCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATCTGAAGCACGAGACTaGGCTTCTCCGCGGACGTGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKSEARD*ASPRTW
Trigger: CCACGTCCGCGGAGAAGCGCAGTCTCGTGCTTCAGA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCGAGGGCATGGAACTaGTGGCCAGCGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSRAWN*WPAWLS
Trigger: AGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCCTCGGGGCAGGGCTaGTCGAGGGCATGGAACTGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPSGQG*SRAWNC
Trigger: GCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGGGCAGGTCGGTTTTaGTGCCCTCGGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVWAGRF*CPRGRA
Trigger: AGCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGCGGGTGGACGACCATaGCGTTGCAGAACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKAGGRP*RCRTQR
Trigger: CCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACCAGGGGCCACTGGCTaGCTGTTGAGACAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKPGATG*LLRQFP
Trigger: TGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCCCCGGGTGCTGCATaGTGTCGCCGAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPPGAA*CRRGAG
Trigger: ACCAGCTCCTCGGCGACAGCATGCAGCACCCGGGGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCCTGCCCCCGGGTGCTaGATGCTGTCGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFPAPGC*MLSPRS
Trigger: GCTCCTCGGCGACAGCATGCAGCACCCGGGGGCAGG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGCCTATTGCATAACTaGAAGGAATTTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWSLLHN*KEFAFF
Trigger: GAAGAAAGCAAATTCCTTGCAGTTATGCAATAGGCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGCAAATCAACCTCCATaGGGAGATTCTTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHANQPP*GDSWSK
Trigger: TTTGGACCAAGAATCTCCGCATGGAGGTTGATTTGC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCTGAGAAATGGAGGTTaGATCCGAGAATACTACTGG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDLRNGG*IREYYW
Trigger: CCAGTAGTATTCTCGGATGCAACCTCCATTTCTCAG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTCTCAAGATATGAGATaGCTAGCCTACAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSQDMR*LAYRDP
Trigger: GGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCCTTCCCTACCCAGTACAGTCAGCAAAGCACACTCATGAAACCGGGTGAAGAAGAGAAGTGGCCAGGCTaGTTGGAAGTATATGCCCTT +
Preference number: 4 (lower is better)
Translates to: SFPTQYSQQSTLMKPGEEEKWPG*LEVYAL
Trigger: AAGGGCATATACTTCCAAGCAGCCTGGCCACTTCTC...TTCTTCACCCGGTTTCATGAGTGTGCTTTGCTGACTGTACTGGGTAGGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCCTGCCCCCAGAGAGCTaGCCAAAGCATCACGTTTTA +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVLPPES*PKHHVL
Trigger: TAAAACGTGATGCTTTGGGCAGCTCTCTGGGGGCAG...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGGCTCCGCCACGTGTaGCAGGGACCCATGGATCTC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGLRHV*QGPMDL
Trigger: GAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGCATTCCTGGGGTCCATaGCAAACACCGTCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVEHSWGP*QTPSRG
Trigger: ACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATG...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAACTCGGAAGCAGCAGTaGGGTTCCGGTGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKTRKQQ*GSGVGR
Trigger: TCTCCCCACACCGGAACCCCACTGCTGCTTCCGAGT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTATTAATGTAGGGATGTaGAGGGCTGAAGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILINVGM*RAEGRL
Trigger: GAGTCTCCCTTCAGCCCTCCACATCCCTACATTAAT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGTTTTCGGCTCGGCCTaGCTGACAGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVVFGSA*LTAWGW
Trigger: CCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGAAAAC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGTTTTCGGCTCGGCCTaGCTGACAGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNVFGSA*LTAWGW
Trigger: CCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGAAAAC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCATATGGTTTCTCATTaGAATGCGTTCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWHMVSH*NAFCFG
Trigger: ACCAAAACAGAACGCATTCCAATGAGAAACCATATG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGATTTTGCACACATATaGTTTCTCATTGGAATGCGT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWDFAHI*FLIGMR
Trigger: ACGCATTCCAATGAGAAACCATATGTGTGCAAAATC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGGTGGCGGCCGAGGATaGATGTCCCCTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNGGGRG*MSPRCF
Trigger: GAAGCAGCGAGGGGACATCCATCCTCGGCCGCCACC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGTGGCGGCCGAGGATaGATGTCCCCTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGGGRG*MSPRCF
Trigger: GAAGCAGCGAGGGGACATCCATCCTCGGCCGCCACC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGTCGGCCAGGCGACCTaGACTGTGAATGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVVGQAT*TVNGCR
Trigger: CCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGAC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTTGACGGTTTTCACCTaGAGGCATTCTTCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILLTVFT*RHSSRF
Trigger: AAAGCGGGAAGAATGCCTCCAGGTGAAAACCGTCAA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACTGCCGGGTTTCTCCTaGCTTGCAAAGCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVLPGFS*LAKQGL
Trigger: CAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACGTGCTCCATCCATTTaGTCCCTGCCGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVRAPSI*SLPGFS
Trigger: GGAGAAACCCGGCAGGGACCAAATGGATGGAGCACG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAGCTGCAGGTGTTGTTaGACTGTGTGCCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILSCRCC*TVCHFL
Trigger: TAGGAAATGGCACACAGTCCAACAACACCTGCAGCT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCCGGGAGAAGCGTCATaGGCCCACCCAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNPGEAS*AHPSCR
Trigger: CCTGCAGCTTGGGTGGGCCCATGACGCTTCTCCCGG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTCTGGCTGGCTTCGCTaGAGCGGCGCGAGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSGWLR*SGARRR
Trigger: CCGACGCCTCGCGCCGCTCCAGCGAAGCCAGCCAGA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTTGAGGCGGTACTGCTaGGCGGGCGTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLRRYC*AGVRLS
Trigger: GCTCAGCCTCACGCCCGCCCAGCAGTACCGCCTCAA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTCATCCTCTCCATGTTaGGCAGGGGCGTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSSSPC*AGASAA
Trigger: CGCCGCCGACGCCCCTGCCCAACATGGAGAGGATGA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCTCGGGGCATGAACTaGAGGCAGGGCCACGCCAGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPRGMN*RQGHAR
Trigger: CCTGGCGTGGCCCTGCCTCCAGTTCATGCCCCGAGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGAAGTTTCGGGACTaGCCGCCCTCGGGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWKFRD*PPSGRV
Trigger: CACGCGGCCCGAGGGCGGCCAGTCCCGAAACTTCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATACCCTGCTTGGTTCTaGGAATTTAAATACTGCACC +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIYPAWF*EFKYCT
Trigger: GGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCCAGCGTGGCTGTCTaGCAGCCCGGGCGCGTCAAA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSASVAV*QPGRVK
Trigger: TTTGACGCGCCCGGGCTGCCAGACAGCCACGCTGGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCTTCGTTCCACTGAATaGGCAGGTCGGTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINLRSTE*AGRFCC
Trigger: GCAGCAAAACCGACCTGCCCATTCAGTGGAACGAAG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGGAAGGCGTTTCCACTaGTGCCACTTCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRGRRFH*CHFRGC
Trigger: ACAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGTACCCCTGTCCCACTaGGTCCTGGTTCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKVPLSH*VLVLHA
Trigger: GGCATGCAGAACCAGGACCCAGTGGGACAGGGGTAC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCCCAAAGCTGGCACATaGCTGGTAGCCCCTGACAAC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNPKAGT*LVAPDN
Trigger: GTTGTCAGGGGCTACCAGCCATGTGCCAGCTTTGGG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACAGAGTTTTTGGCGCTaGTCCCCTGTAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVQSFWR*SPVAGS
Trigger: GCTGCCTGCTACAGGGGACCAGCGCCAAAAACTCTG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCAGAGTTTTTGGCGCTaGTCCCCTGTAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNQSFWR*SPVAGS
Trigger: GCTGCCTGCTACAGGGGACCAGCGCCAAAAACTCTG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACCCCCGACATCAGGCTaGAGTGGTCCCCATCGTCTA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKPPTSG*SGPHRL
Trigger: TAGACGATGGGGACCACTCCAGCCTGATGTCGGGGG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGACAGCGCTGGGAATaGGAGGGACGCCCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGQRWE*EGRPRR
Trigger: ACGCCTCGGGCGTCCCTCCCATTCCCAGCGCTGTCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAATTCCAGGGGTCAATaGGACAGAATACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDNSRGQ*DRIQQV
Trigger: TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGATTTGGAGATTTGTaGAAAAGTGAGACTGGATCT +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRFGDL*KSETGS
Trigger: AGATCCAGTCTCACTTTTCCACAAATCTCCAAATCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTGGAGGAGGTCAGCATaGTCCCTTCCACCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNWRRSA*SLPPKL
Trigger: GAGCTTGGGTGGAAGGGACCATGCTGACCTCCTCCA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTTGGGCAACACCAACTaGTCCCTCTCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILLGNTN*SLSLTR
Trigger: TCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGTGCACACACAGCCTTaGAGTGCTGATTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINVHTQP*SADWAT
Trigger: TGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCAC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGAGTTCATCTGTGGCTaGGCTGCAGCCCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKREFICG*AAAPGL
Trigger: AAGCCCAGGGGCTGCAGCCCAGCCACAGATGAACTC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCTCGAACACGCACTTGTaGGCGCTTGCAGACAGACAT +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVSNTHL*ALADRH
Trigger: ATGTCTGTCTGCAAGCGCCCACAAGTGCGTGTTCGA...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCACACACTGTCCACCATaGCAACAGGCAGAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVTHCPP*QQAEVC
Trigger: GCAGACTTCTGCCTGTTGCCATGGTGGACAGTGTGT...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp ATCCATATGATTCTGTTTTCCTTTCTACGAATAGCGTCAGTGCAGGGGTCCAAGAAGGATGGAGGGCCATaGCGATGTCAACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: IHMILFSFLRIASVQGSKKDGGP*RCQPPA
Trigger: GGCTGGTGGTTGACATCGCCATGGCCCTCCATCCTT...CTTGGACCCCTGCACTGACGCTATTCGTAGAAAGGAAAACAGAATCATATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGCCGGCGGTGGCAGCTaGGGGAATAATGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKAGGGS*GNNVCI
Trigger: TATGCAGACATTATTCCCTCAGCTGCCACCGCCGGC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGTGCTATCCATAGCATaGAGATATTCCATGTGGATG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDVLSIA*RYSMWM
Trigger: CATCCACATGGAATATCTTCATGCTATGGATAGCAC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTCGGCTCGGCCTGGCTaGCAGCCTGGGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSARPG*QPGAGE
Trigger: TTCTCCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGGTTTCTGCTCTCTTaGGCAGTCCAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGFLLS*AVQPPA
Trigger: TGCAGGTGGCTGGACTGCTCAAGAGAGCAGAAACCC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTACATATACTGGGCTTTaGAGGGTTTCTGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILTYTGL*RVSALL
Trigger: CAAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTCACCAAGGGCTCCCTaGGTCGGTCGGCCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSPRAP*VGRPGD
Trigger: GTCGCCTGGCCGACCGACTCAGGGAGCCCTTGGTGA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTTGGCTTCTCTGCCTTaGCGGTTTTCACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLASLP*RFSPGG
Trigger: GCCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATTGGCTTCTCTGCCTTaGCGGTTTTCACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVLASLP*RFSPGG
Trigger: GCCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACTGTTGGCTGCTGCATaGAGACTGACCACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLLAAA*RLTTRA
Trigger: AGCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAAATGGTTGAGTCCATaGTTGGGGTTTCATCGATGG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILKWLSP*LGFHRW
Trigger: CCATCGATGAAACCCCAATCATGGACTCAACCATTT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCAGGTAGGCCGAGCTaGTGGTGCTGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSGRPS*WCWRCC
Trigger: ACAGCAGCGCCAGCACCATCAGCTCGGCCTACCTGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCCGCGGCCCACACTTaGGCTTGGAGGAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAAAHT*AWRRTG
Trigger: ACCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGTGCTCTTCAGCTTTaGGGCTTGAATCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGALQL*GLNPGT
Trigger: GGTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTCGCCGAGGAGCTGGTaGGCCAGGTACCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSPRSW*ARYPCP
Trigger: GGGACAGGGGTACCTGGCTCACCAGCTCCTCGGCGA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGACAACTGCCAAGCTTaGCGGCTGGCTGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVDNCQA*RLAAHA
Trigger: GGCATGGGCAGCCAGCCGTCAAGCTTGGCAGTTGTC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAATGGCTGGTAGCCCCTaGCAACTGCCAAGCTTGACG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRMAGSP*QLPSLT
Trigger: CGTCAAGCTTGGCAGTTGTCAGGGGCTACCAGCCAT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAATGGCTGGTAGCCCCTaGCAACTGCCAAGCTTGACG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKMAGSP*QLPSLT
Trigger: CGTCAAGCTTGGCAGTTGTCAGGGGCTACCAGCCAT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACACTGTGCTTGTCACCTaGTTAGCACCTGGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINTVLVT*LAPGES
Trigger: ACTTTCCCCAGGTGCTAATCAGGTGACAAGCACAGT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCTCTTCAACTCCTATTaGTTTCCGTTGGTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILLFNSY*FPLVAV
Trigger: GACTGCAACCAACGGAAATCAATAGGAGTTGAAGAG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCACACTTACAGACATaGAGAGCTGAAAACCAAAAC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDAHLQT*RAENQN
Trigger: GTTTTGGTTTTCAGCTCTTCATGTCTGTAAGTGTGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGCAAATGTGATAACTaGGAATCGACCATACAGACA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGKCDN*ESTIQT
Trigger: TGTCTGTATGGTCGATTCTCAGTTATCACATTTGCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCCACAACAGATCACTaGAATTCTGGAGGAGTATAC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILATTDH*NSGGVY
Trigger: GTATACTCCTCCAGAATTTCAGTGATCTGTTGTGGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGCCAACTTCTCTTGGTaGGCTCTCTCTAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNANFSW*ALSSCA
Trigger: TGCGCAGCTAGAGAGAGCTCACCAAGAGAAGTTGGC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACACCAGTGCTGCTCACTaGAGACTCACTCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNTSAAH*RLTRGL
Trigger: AAGCCCACGAGTGAGTCTGCAGTGAGCAGCACTGGT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATCGGGTCACCAGTGCTaGTCACTGCAGACTCACTCG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKSGHQC*SLQTHS
Trigger: CGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACATATGGTGCACAAGCTaGTCTTGGGTGTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINIWCTS*SWVSNS
Trigger: GGAGTTCGACACCCAAGAGCAGCTTGTGCACCATAT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGCAGCCTGGGATTTTaGACACATATGGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDCSLGF*THMVSH
Trigger: ATGAGAAACCATATGTGTGCAAAATCCCAGGCTGCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGCAGCCTGGGATTTTaGACACATATGGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHCSLGF*THMVSH
Trigger: ATGAGAAACCATATGTGTGCAAAATCCCAGGCTGCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCCCTCGGGGCAGGGCTaGTCGAGGGCATGGAACTGC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFPSGQG*SRAWNC
Trigger: GCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCAGGTCGGTTTTGCTaGCCTCGGGGCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAGRFC*PRGRAA
Trigger: AGCAGCCCTGCCCCGAGGGCAGCAAAACCGACCTGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGGCAGGTCGGTTTTaGTGCCCTCGGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWAGRF*CPRGRA
Trigger: AGCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAAGGCGTTTCCACTGGTaGCACTTCCGGGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKRRFHW*HFRGCC
Trigger: ACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAGACAGTTCCCATACTaGGGGGCCTTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVRQFPY*GALQGC
Trigger: ACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACAGGCACCGTCGAGTaGACCAGGGGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTGTVE*TRGHWL
Trigger: CAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGCCCCCGCTCCCTTaGATGGGGGTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWPPLP*MGVLFS
Trigger: GCTGAAGAGCACCCCCATGCAAGGGAGCGGGGGCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCCCCCGGGTGCTGCATaGTGTCGCCGAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFPPGAA*CRRGAG
Trigger: ACCAGCTCCTCGGCGACAGCATGCAGCACCCGGGGG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGCTTGACGGCTGGCTaGCCATGCCGTGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSLTAG*PCREPL
Trigger: CAGGGGCTCACGGCATGGGCAGCCAGCCGTCAAGCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTTTCCTAAAGCCTATTaGATAACTGCAAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWFPKAY*ITARNL
Trigger: CAAATTCCTTGCAGTTATGCAATAGGCTTTAGGAAA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGCTAATTCTACCCAATTaGTTCAATCTACCATCTATC +
Preference number: 4 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWLILPN*FNLPSI
Trigger: GATAGATGGTAGATTGAAGCAATTGGGTAGAATTAG...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTTTATGTGTATCAAATaGACGTGGGGAGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDFMCIK*TWGVAA
Trigger: TGCAGCTACTCCCCACGTGCATTTGATACACATAAA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCCTTCCCTACCCAGTACAGTCAGCAAAGCACACTCATGAAACCGGGTGAAGAAGGGGTTGGAGGAGACTaGTGTCCTGTCACTAATTTT +
Preference number: 4 (lower is better)
Translates to: SFPTQYSQQSTLMKPGEEGVGGD*CPVTNF
Trigger: AAAATTAGTGACAGGACAGCAGTCTCCTCCAACCCC...TTCTTCACCCGGTTTCATGAGTGTGCTTTGCTGACTGTACTGGGTAGGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCAAGCAAACAGCCCACTaGTCCAAGAGCATCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVKQTAH*SKSICQ
Trigger: TTGGCAGATGCTCTTGGAGCAGTGGGCTGTTTGCTT...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGTGGAGCTGTGGGACTaGGCCTCCATGATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNVELWD*ASMMSS
Trigger: AGAAGACATCATGGAGGCCCAGTCCCACAGCTCCAC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGGCTCCGCCACGTGTaGCAGGGACCCATGGATCTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGLRHV*QGPMDL
Trigger: GAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGAAGTCATATGCAATaGAGGAATCGGAGATGGATC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGSHMQ*RNRRWI
Trigger: GATCCATCTCCGATTCCTCCATTGCATATGACTTCC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGGTTGCTGAGATCATaGAGAGCGATGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGLLRS*RAMGCC
Trigger: ACAGCAGCCCATCGCTCTCCATGATCTCAGCAACCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGGCTGACTCCTGCATaGGGCGCATCTGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGLTPA*GASVGL
Trigger: GAGCCCTACAGATGCGCCCCATGCAGGAGTCAGCCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACATGATAGTATTCTGCTaGGCTGACTCCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINMIVFC*ADSCMG
Trigger: CCCCATGCAGGAGTCAGCCCAGCAGAATACTATCAT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTTTTCGGCTCGGCCTaGCTGACAGCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVFGSA*LTAWGW
Trigger: CCAGCCCCAGGCTGTCAGCCAGGCCGAGCCGAAAAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAATAGGCCTCTGTGTTaGAAAAGTTGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINNRPLC*KSWGRV
Trigger: CACCCTGCCCCAACTTTTCCAACACAGAGGCCTATT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGGCCGGAGCTGACCTaGACGGGGTTCAGAACCGTA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGPELT*TGFRTV
Trigger: TACGGTTCTGAACCCCGTCCAGGTCAGCTCCGGCCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCCGAGCCCCTGGGCTaGGGAGGTCTTCATCGGGTT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPEPLG*GGLHRV
Trigger: AACCCGATGAAGACCTCCCCAGCCCAGGGGCTCGGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGGTCGTTATTTATATaGTGCACAAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHWSLFI*CTSCSW
Trigger: CCAAGAGCAGCTTGTGCACCATATAAATAACGACCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGTGGCGGCCGAGGATaGATGTCCCCTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGGGRG*MSPRCF
Trigger: GAAGCAGCGAGGGGACATCCATCCTCGGCCGCCACC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGAATCTCTCGGGGGTaGCGGCCGAGGATGGATGTC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGISRG*RPRMDV
Trigger: GACATCCATCCTCGGCCGCCACCCCCGAGAGATTCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTCGGCCAGGCGACCTaGACTGTGAATGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVGQAT*TVNGCR
Trigger: CCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACTGCCGGGTTTCTCCTaGCTTGCAAAGCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLPGFS*LAKQGL
Trigger: CAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCGGGAGAAGCGTCATaGGCCCACCCAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPGEAS*AHPSCR
Trigger: CCTGCAGCTTGGGTGGGCCCATGACGCTTCTCCCGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTGAGGCGGTACTGCTaGGCGGGCGTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLRRYC*AGVRLS
Trigger: GCTCAGCCTCACGCCCGCCCAGCAGTACCGCCTCAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCATCCTCTCCATGTTaGGCAGGGGCGTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSSSPC*AGASAA
Trigger: CGCCGCCGACGCCCCTGCCCAACATGGAGAGGATGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGGAAGTTTCGGGACTaGCCGCCCTCGGGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFWKFRD*PPSGRV
Trigger: CACGCGGCCCGAGGGCGGCCAGTCCCGAAACTTCCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGCTCGTACCCTGCTTaGTTCTGGGAATTTAAATAC +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDCSYPA*FWEFKY
Trigger: GTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGCTCGTACCCTGCTTaGTTCTGGGAATTTAAATAC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHCSYPA*FWEFKY
Trigger: GTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCTGCTCGAGGGCATaGAACTGCTGGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGCSRA*NCWPAW
Trigger: CCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGCACCAGGGGCCACTaGCTGCCTGTTGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRCTRGH*LPVETV
Trigger: AACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACCCAAAGCTGGCACATaGCTGGTAGCCCCTGACAAC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRPKAGT*LVAPDN
Trigger: GTTGTCAGGGGCTACCAGCCATGTGCCAGCTTTGGG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCCCTCGGCATAGCCTaGCGCCTGCTGCCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSLGIA*RLLPPK
Trigger: CTTTGGGGGCAGCAGGCGCCAGGCTATGCCGAGGGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACAGAGTTTTTGGCGCTaGTCCCCTGTAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKQSFWR*SPVAGS
Trigger: GCTGCCTGCTACAGGGGACCAGCGCCAAAAACTCTG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCTCATGGACAGCGCTaGGAATGGGAGGGACGCCCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAHGQR*EWEGRP
Trigger: CGGGCGTCCCTCCCATTCCCAGCGCTGTCCATGAGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTGTTGGTGGTGCTCATaGACAGCGCTGGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNCWWCS*TALGMG
Trigger: TCCCATTCCCAGCGCTGTCCATGAGCACCACCAACA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGAACTGAATTGGAGATaGGGGGAACATCAATATTCT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIELNWR*GEHQYS
Trigger: AGAATATTGATGTTCCCCCCATCTCCAATTCAGTTC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAATAAAAGTAGCAATGTaGCTGAGTGTCACCAACTGT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIIKVAM*LSVTNC
Trigger: ACAGTTGGTGACACTCAGCCACATTGCTACTTTTAT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAACAGTCCCCAGGCTCTaGCTAGCTACTTTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRTVPRL*LATLRQ
Trigger: TTGGCGCAAAGTAGCTAGCCAGAGCCTGGGGACTGT...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAACAGTCCCCAGGCTCTaGCTAGCTACTTTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVTVPRL*LATLRQ
Trigger: TTGGCGCAAAGTAGCTAGCCAGAGCCTGGGGACTGT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS-3UTR TCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCCATGGATCTCTTTCTTaGTCAATGAGGCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVHGSLS*SMRPSR
Trigger: ACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATG...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTAGGGATGTGGAGGGCTaGAGGGAGACTCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVRDVEG*RETRKQ
Trigger: CTGCTTCCGAGTCTCCCTTCAGCCCTCCACATCCCT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCAGAAGGGCCGGAGCTaGCCTGGACGGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSQKGRS*PGRGSE
Trigger: TTCTGAACCCCGTCCAGGTCAGCTCCGGCCCTTCTG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATTGGCTTCTCTGCCTTaGCGGTTTTCACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLASLP*RFSPGG
Trigger: GCCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACCACCAGGGCTTGGCTaGGATGTCATTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRPPGLG*DVIGFS
Trigger: AGAGAAGCCAATGACATCTCAGCCAAGCCCTGGTGG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCAGGTAGGCCGAGCTaGTGGTGCTGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSGRPS*WCWRCC
Trigger: ACAGCAGCGCCAGCACCATCAGCTCGGCCTACCTGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACTGACTTCGTTCCACTaGATGGGCAGGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVLTSFH*MGRSVL
Trigger: CAAAACCGACCTGCCCATTCAGTGGAACGAAGTCAG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCGGCGCTTCCGGAGCTaGCTTCGTTCCACTGAATGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNRRFRS*LRSTEW
Trigger: CCATTCAGTGGAACGAAGTCAGCTCCGGAAGCGCCG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCACCATGCTGCCAGCTaGCTCATTTGGCGCTACCGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVHHAAS*LIWRYR
Trigger: CCGGTAGCGCCAAATGAGTCAGCTGGCAGCATGGTG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGACAACTGCCAAGCTTaGCGGCTGGCTGCCCATGCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSDNCQA*RLAAHA
Trigger: GGCATGGGCAGCCAGCCGTCAAGCTTGGCAGTTGTC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCTTTCATCTCCATCTTaGTACCATTCACCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINLSSPS*YHSPCR
Trigger: CCTGCAGGGTGAATGGTATCAAGATGGAGATGAAAG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGGATCTCTGATTCTGTaGCAACATTATGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHGSLIL*QHYALF
Trigger: AAACAAGGCATAATGTTGTCACAGAATCAGAGATCC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGATCTCTGATTCTGTaGCAACATTATGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGSLIL*QHYALF
Trigger: AAACAAGGCATAATGTTGTCACAGAATCAGAGATCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGTGAGACTGGATCTCTaGTTCTGTGACAACATTATG +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILVRLDL*FCDNIM
Trigger: CATAATGTTGTCACAGAATCAGAGATCCAGTCTCAC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACAGATTTGTGGAAAAGTaGGACTGGATCTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHRFVEK*DWISDS
Trigger: AGAATCAGAGATCCAGTCTCACTTTTCCACAAATCT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTCAGGCCCCATGCTTTaGAAACAAGAGTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSGPML*KQELER
Trigger: CCTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAACAGCCTTGGAGTGCTaGTTGGGCAACACCAACTGG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRTALEC*LGNTNW
Trigger: CCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCGCACTCTGTATACAGTaGAAGGGACACTTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVALCIQ*KGHFPS
Trigger: GCTTGGAAAGTGTCCCTTTCACTGTATACAGAGTGC...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGGGCTTGTTCTGCTGTaGGGACTCAGAAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNGLVLL*GLRRAG
Trigger: TCCGGCCCTTCTGAGTCCTCACAGCAGAACAAGCCC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGGACATTCTGTGGCTaGATAGTGATTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILWTFCG*IVIAFL
Trigger: AAGAAACGCAATCACTATGCAGCCACAGAATGTCCA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGCTGGGCTGACTCCTaGATGGGGCGCATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVCWADS*MGRICR
Trigger: CCTACAGATGCGCCCCATGCAGGAGTCAGCCCAGCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGCTGGGCTGACTCCTaGATGGGGCGCATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNCWADS*MGRICR
Trigger: CCTACAGATGCGCCCCATGCAGGAGTCAGCCCAGCA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTTGGACCTCTTGTTGTaGATCGGGTCACCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLDLLL*IGSPVL
Trigger: CAGCACTGGTGACCCGATGCACAACAAGAGGTCCAA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGTGTTGCTGAGGTCCTaGTGCTCACCAAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNVLLRS*CSPRAP
Trigger: GGGAGCCCTTGGTGAGCAGCAGGACCTCAGCAACAC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGGACTGTTGGCTGCTaGATGAAGACTGACCACCAG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGTVGC*MKTDHQ
Trigger: CTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGGGGGACTGTTGGCTaGTGCATGAAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRWGTVG*CMKTDH
Trigger: GTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCAGAGAGGTCGCTTCTaGCCGGGAGAAGCGTCATGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNQRGRF*PGEASW
Trigger: CCATGACGCTTCTCCCGGGCAGAAGCGACCTCTCTG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGGGCGCTGGGGAAGTaGTGCTCGTACCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRALGK*CSYPAW
Trigger: CCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGCAGGTCGGTTTTGCTaGCCTCGGGGCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFAGRFC*PRGRAA
Trigger: AGCAGCCCTGCCCCGAGGGCAGCAAAACCGACCTGC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGACGACCATGCCGTTaGAGAACCCAAAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGRPCR*RTQRRE
Trigger: CTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTCCTCAAGGGGTTCTaGGGGTGGACGACCATGCCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLLKGF*GWTTMP
Trigger: CGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCCACCGTAGGGGTTaGTGTTCTCCCCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGHRRG*CSPRGS
Trigger: AGACCCTCGGGGAGAACAGCAACCCCTACGGTGGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCCAGGGGCCACTGGCTaGCTGTTGAGACAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVPGATG*LLRQFP
Trigger: TGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTACAGGCACCGTCGAGTaGACCAGGGGCCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFTGTVE*TRGHWL
Trigger: CAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCCCTTGCATGGGGGTaGTCTTCAGCTTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSLAWG*SSALRL
Trigger: AAGCCTCAAAGCTGAAGAGCACCCCCATGCAAGGGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGGCCCCCGCTCCCTTaGATGGGGGTGCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFWPPLP*MGVLFS
Trigger: GCTGAAGAGCACCCCCATGCAAGGGAGCGGGGGCCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAACTGGGTCCTGGTTCTaGATGCCATTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVTGSWF*MPFTML
Trigger: CAGCATGGTGAATGGCATGCAGAACCAGGACCCAGT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACACAGCGGATGGGGCTaGCCTTTCATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKHSGWG*PFISIL
Trigger: CAAGATGGAGATGAAAGGGCAGCCCCATCCGCTGTG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAATATTCTGTCATCTATaGTACAGTGCACCCACAAAA +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIIFCHL*YSAPTK
Trigger: TTTTGTGGGTGCACTGTAGCATAGATGACAGAATAT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATCCATGTACTCTTTGTaGACACACAGTATGACTTTT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISMYSL*THSMTF
Trigger: AAAAGTCATACTGTGTGTGCACAAAGAGTACATGGA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CCCCTGCTCCATTTGCTTTCTTTAGCGTCTCCTAGAACAAACACTGGTCCAGGTACCAAAAATGCCTTTTaGTTTCTCGCTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLLHLLSLASPRTNTGPGTKNAF*FLAPSR
Trigger: CCTGGAAGGAGCGAGAAAGCAAAAGGCATTTTTGGT...ACCTGGACCAGTGTTTGTTCTAGGAGACGCTAAAGAAAGCAAATGGAGCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCAAAAAGTGGGGTCCTTaGAAGCAGTGCTTAGGACGT +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVKKWGP*KQCLGR
Trigger: ACGTCCTAAGCACTGCTTGCAAGGACCCCACTTTTT...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCTGCTCCAAGAGCATCTaGCAATGGACTTTAACAGCC +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVCSKSI*QWTLTA
Trigger: GGCTGTTAAAGTCCATTGGCAGATGCTCTTGGAGCA...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGTGGAGCTGTGGGACTaGGCCTCCATGATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRVELWD*ASMMSS
Trigger: AGAAGACATCATGGAGGCCCAGTCCCACAGCTCCAC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGTGGTCGTGGAGCTGTaGGACTGGGCCTCCATGATG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVVVVEL*DWASMM
Trigger: CATCATGGAGGCCCAGTCCCACAGCTCCACGACCAC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCTTTTCAGTGGTCGTaGAGCTGTGGGACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSFQWS*SCGTGP
Trigger: AGGCCCAGTCCCACAGCTCCACGACCACTGAAAAGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCATTCCTGGGGTCCATaGCAAACACCGTCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVHSWGP*QTPSRG
Trigger: ACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCCATGTAACCATTCCTaGGGTCCATGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNPCNHS*GPWQTP
Trigger: CGGTGTTTGCCATGGACCCCAGGAATGGTTACATGG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACATTAATGTAGGGATGTaGAGGGCTGAAGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKININVGM*RAEGRL
Trigger: GAGTCTCCCTTCAGCCCTCCACATCCCTACATTAAT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGGCTGACTCCTGCATaGGGCGCATCTGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGLTPA*GASVGL
Trigger: GAGCCCTACAGATGCGCCCCATGCAGGAGTCAGCCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGATATTCCATGTGGATaGCCCCCGTGCCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSDIPCG*PPCRRW
Trigger: CCACCGCCGGCACGGGGGCCATCCACATGGAATATC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCCTGGCTGACAGCCTaGGGCTGGAGAATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAWLTA*GWRIWC
Trigger: GCACCAGATTCTCCAGCCCCAGGCTGTCAGCCAGGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAACCGTAGGGATCCCTaGAATAGGCCTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVNRRDP*NRPLCW
Trigger: CCAACACAGAGGCCTATTCCAGGGATCCCTACGGTT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGGCCGGAGCTGACCTaGACGGGGTTCAGAACCGTA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGPELT*TGFRTV
Trigger: TACGGTTCTGAACCCCGTCCAGGTCAGCTCCGGCCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACTGCAGACTCACTCGTaGGCTTGTTCTGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVLQTHS*ACSVRT
Trigger: AGTCCTCACAGAACAAGCCCACGAGTGAGTCTGCAG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGAATGCGTTCTGTTTTaGTGTTTGGCGCGATCAGAG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINECVLF*CLARSE
Trigger: CTCTGATCGCGCCAAACACCAAAACAGAACGCATTC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACATATGGTTTCTCATTaGAATGCGTTCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIHMVSH*NAFCFG
Trigger: ACCAAAACAGAACGCATTCCAATGAGAAACCATATG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGAATCTCTCGGGGGTaGCGGCCGAGGATGGATGTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGISRG*RPRMDV
Trigger: GACATCCATCCTCGGCCGCCACCCCCGAGAGATTCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGACAGGGGGACGAGTaGAAGTTTCGGGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGQGDE*KFRDWP
Trigger: CGGCCAGTCCCGAAACTTCCACTCGTCCCCCTGTCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAAGTCACCGGGCCCGTaGGGCACTTTGCTGTCGTCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSKSPGP*GTLLSS
Trigger: GGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGGGCATGGAACTGCTaGCCAGCGTGGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRAWNC*PAWLSG
Trigger: GCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGCTGCTCGAGGGCATaGAACTGCTGGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGCSRA*NCWPAW
Trigger: CCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACTTCGTTCCACTGAATaGGCAGGTCGGTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVLRSTE*AGRFCC
Trigger: GCAGCAAAACCGACCTGCCCATTCAGTGGAACGAAG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCTTCGTTCCACTGAATaGGCAGGTCGGTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLRSTE*AGRFCC
Trigger: GCAGCAAAACCGACCTGCCCATTCAGTGGAACGAAG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAAGGGGTTCTGCGGGTaGACGACCATGCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNKGFCG*TTMPLQ
Trigger: CTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGTCCCACTGGGTCCTaGTTCTGCATGCCATTCACC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRCPTGS*FCMPFT
Trigger: GGTGAATGGCATGCAGAACCAGGACCCAGTGGGACA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGTACCCCTGTCCCACTaGGTCCTGGTTCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNVPLSH*VLVLHA
Trigger: GGCATGCAGAACCAGGACCCAGTGGGACAGGGGTAC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGACATCAGGCTGGAGTaGTCCCCATCGTCTATGATG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVDIRLE*SPSSMM
Trigger: CATCATAGACGATGGGGACCACTCCAGCCTGATGTC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCCCCCGACATCAGGCTaGAGTGGTCCCCATCGTCTA +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNPPTSG*SGPHRL
Trigger: TAGACGATGGGGACCACTCCAGCCTGATGTCGGGGG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGTTCTGAATGATACTTaGGCTCAGGGCCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVVLNDT*AQGPRH
Trigger: ATGTCGGGGGCCCTGAGCCCAAGTATCATTCAGAAC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGCTCATGGACAGCGCTaGGAATGGGAGGGACGCCCG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFAHGQR*EWEGRP
Trigger: CGGGCGTCCCTCCCATTCCCAGCGCTGTCCATGAGC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGAGAACAGCAGGCATaGAAGGGGAATTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGEQQA*KGNCSV
Trigger: GACACTGCAATTCCCCTTCCATGCCTGCTGTTCTCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACAGACAACAACAGTGGTaGGCCGGATCACTGTGCATC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNRQQQW*AGSLCI
Trigger: GATGCACAGTGATCCGGCCCACCACTGTTGTTGTCT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGTGCACACACAGCCTTaGAGTGCTGATTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVVHTQP*SADWAT
Trigger: TGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCAC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GGGTTGGAGGAGACTGCTGTCCTGTCACTAATTTTGACAAGACAACTTTTGTGTGAAATGACTCCAGGCTaGGCTGCTGGTAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLEETAVLSLILTRQLLCEMTPG*AAGNPC
Trigger: ACAGGGATTACCAGCAGCCCAGCCTGGAGTCATTTC...ACACAAAAGTTGTCTTGTCAAAATTAGTGACAGGACAGCAGTCTCCTCCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR TCA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGACTCTTTCTTGATCAATaGGGCCCTCTCGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRLFLDQ*GPLVTR
Trigger: TCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAG...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACTCTTTCTTGATCAATaGGGCCCTCTCGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVLFLDQ*GPLVTR
Trigger: TCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGGGATGTGGAGGGCTaGAGGGAGACTCGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRDVEG*RETRKQ
Trigger: CTGCTTCCGAGTCTCCCTTCAGCCCTCCACATCCCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCAGCCCACGGGTTGCTaGGATCATGGAGAGCGATGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSQPTGC*DHGERW
Trigger: CCATCGCTCTCCATGATCTCAGCAACCCGTGGGCTG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTAGTATTCTGCTGGGCTaGCTCCTGCATGGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSILLG*LLHGAH
Trigger: ATGCGCCCCATGCAGGAGTCAGCCCAGCAGAATACT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACATAGGAGCCACTTGCTaGAGAGCTGCTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNIGATC*RAATGI
Trigger: AATTCCCGTAGCAGCTCTTCAGCAAGTGGCTCCTAT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCGTGGGCTTGTTCTGTaGGGACTCAGAAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRGLVL*GLRRAG
Trigger: TCCGGCCCTTCTGAGTCCTCACAGAACAAGCCCACG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAGTTTGTCTCATAGATaGCTTCAGGCTCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSLSHR*LQAPVC
Trigger: GCAAACAGGAGCCTGAAGTCATCTATGAGACAAACT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGGTTTCTGCTCTCTTaGGCAGTCCAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGFLLS*AVQPPA
Trigger: TGCAGGTGGCTGGACTGCTCAAGAGAGCAGAAACCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGCGATCAGAGGCATTTaGGAAAGCCTTGTTGCAACC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNAIRGI*ESLVAT
Trigger: GGTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAGGCGACCTGGACTGTaGATGGCTGCCGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNRRPGL*MAAGIS
Trigger: AGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGCATTCTTCCCGCTTTaGGGTAGTGTTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKAFFPL*GSVAEV
Trigger: GACCTCAGCAACACTACCTCAAAGCGGGAAGAATGC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCTGTTGGCTGCTGCATaGAGACTGACCACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLLAAA*RLTTRA
Trigger: AGCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATGTTGGAATAGTTGCTaGTGGGGGACTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKCWNSC*WGTVGC
Trigger: GCAGCCAACAGTCCCCCATCAGCAACTATTCCAACA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGTGTGCCATTTCCTATaGGAGGAGAGACCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNVCHFL*EERPQG
Trigger: CCCCTGCGGTCTCTCCTCTCATAGGAAATGGCACAC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACTGACTTCGTTCCACTaGATGGGCAGGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLTSFH*MGRSVL
Trigger: CAAAACCGACCTGCCCATTCAGTGGAACGAAGTCAG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCGGCGCTTCCGGAGCTaGCTTCGTTCCACTGAATGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRRFRS*LRSTEW
Trigger: CCATTCAGTGGAACGAAGTCAGCTCCGGAAGCGCCG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCCACTGGCTGCCTGTTaGGACAGTTCCCATACTGCG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVPLAAC*DSSHTA
Trigger: CGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCACCATGCTGCCAGCTaGCTCATTTGGCGCTACCGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSHHAAS*LIWRYR
Trigger: CCGGTAGCGCCAAATGAGTCAGCTGGCAGCATGGTG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACATGGCTGGTAGCCCCTaGCAACTGCCAAGCTTGACG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNMAGSP*QLPSLT
Trigger: CGTCAAGCTTGGCAGTTGTCAGGGGCTACCAGCCAT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCACATCTCAGTTAGGTaGGATGAGATTGCTAAAATA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDHISVR*DEIAKI
Trigger: TATTTTAGCAATCTCATCTCACCTAACTGAGATGTG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTATTAATAAATGTTACTaGTACAGCCGCTTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILINKCY*YSRLWG
Trigger: ACCCCACAAGCGGCTGTATCAGTAACATTTATTAAT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGAGTTGGAAAGGGATTaGACCAAACCATTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINELERD*TKPLEH
Trigger: GTGCTCTAATGGTTTGGTTCAATCCCTTTCCAACTC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACTTGGAGGCTGGGGGTaGGTCTCAAGATATGAGATG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLGGWG*VSRYEM
Trigger: CATCTCATATCTTGAGACTCACCCCCAGCCTCCAAG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCCTTCCCTACCCAGTACAGTCAGCAAAGCACACTCATGAAACCGGGTGAAGAACAACACAAAGCATTTTaGACTCTTGCCAGACTAGTC +
Preference number: 4 (lower is better)
Translates to: SFPTQYSQQSTLMKPGEEQHKAF*TLARLV
Trigger: GACTAGTCTGGCAAGAGTTCAAAATGCTTTGTGTTG...TTCTTCACCCGGTTTCATGAGTGTGCTTTGCTGACTGTACTGGGTAGGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR TCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGAATCACGTTGCTGCATaGAGCAGGACTCGAACACGC +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVENHVAA*SRTRTR
Trigger: GCGTGTTCGAGTCCTGCTTCATGCAGCAACGTGATT...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCTGGCTGCATAGTGATTaGGTTTCTTCTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVWLHSD*VSSLSV
Trigger: CACAGAGAGAGAAGAAACGCAATCACTATGCAGCCA...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGCTGGGCTGACTCCTaGATGGGGCGCATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCWADS*MGRICR
Trigger: CCTACAGATGCGCCCCATGCAGGAGTCAGCCCAGCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGTCTGCATAGGGGCTaGGCTGGCCAGTTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCLHRG*AGQLAG
Trigger: CCCTGCTAACTGGCCAGCGCAGCCCCTATGCAGACA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTCGGGTCACCAGTGCTaGTCACTGCAGACTCACTCG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSGHQC*SLQTHS
Trigger: CGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGCATCGGGTCACCAGTaGTGCTCACTGCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVASGHQ*CSLQTH
Trigger: GTGAGTCTGCAGTGAGCAGCACTGGTGACCCGATGC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACATATGGTGCACAAGCTaGTCTTGGGTGTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNIWCTS*SWVSNS
Trigger: GGAGTTCGACACCCAAGAGCAGCTTGTGCACCATAT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTGTTGCTGAGGTCCTaGTGCTCACCAAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVLLRS*CSPRAP
Trigger: GGGAGCCCTTGGTGAGCAGCAGGACCTCAGCAACAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCAGAGAGGTCGCTTCTaGCCGGGAGAAGCGTCATGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSQRGRF*PGEASW
Trigger: CCATGACGCTTCTCCCGGGCAGAAGCGACCTCTCTG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCTGAAGCACGAGACTaGGCTTCTCCGCGGACGTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSEARD*ASPRTW
Trigger: CCACGTCCGCGGAGAAGCGCAGTCTCGTGCTTCAGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATGGGAATTTAAATACTaGACCACGTCGTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVWEFKY*TTSSGR
Trigger: CCTGCCGGACGACGTGGTGCAGTATTTAAATTCCCA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCGCTGGGGAAGTGCTaGTCGTACCCTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSALGKC*SYPAWF
Trigger: GAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCGAGGGCATGGAACTaGTGGCCAGCGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSRAWN*WPAWLS
Trigger: AGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGACGACCATGCCGTTaGAGAACCCAAAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGRPCR*RTQRRE
Trigger: CTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCGGGTGGACGACCATaGCGTTGCAGAACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAGGRP*RCRTQR
Trigger: CCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCTCCTCAAGGGGTTCTaGGGGTGGACGACCATGCCG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLLKGF*GWTTMP
Trigger: CGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCAGGGGCCACTGGCTaGCTGTTGAGACAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPGATG*LLRQFP
Trigger: TGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGCCATTCACCATGCTaGCAGCTGACTCATTTGGCG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRCHSPC*QLTHLA
Trigger: CGCCAAATGAGTCAGCTGGCAGCATGGTGAATGGCA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAACTGGGTCCTGGTTCTaGATGCCATTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKTGSWF*MPFTML
Trigger: CAGCATGGTGAATGGCATGCAGAACCAGGACCCAGT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCTGAGCTGTCCTGACTaGAGAGCAAGGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLSCPD*RARLSL
Trigger: GAGGGACAGCCTTGCTCTGCAGTCAGGACAGCTCAG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATTTCCTAAAGCCTATTaGATAACTGCAAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIFPKAY*ITARNL
Trigger: CAAATTCCTTGCAGTTATGCAATAGGCTTTAGGAAA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTCATCTATGCTACAGTaGACCCACAAAAGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHSSMLQ*THKSFL
Trigger: TAAGAAACTTTTGTGGGTGCACTGTAGCATAGATGA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTCATCTATGCTACAGTaGACCCACAAAAGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSSMLQ*THKSFL
Trigger: TAAGAAACTTTTGTGGGTGCACTGTAGCATAGATGA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACATATTCTGTCATCTATaGTACAGTGCACCCACAAAA +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDIFCHL*YSAPTK
Trigger: TTTTGTGGGTGCACTGTAGCATAGATGACAGAATAT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACATATTCTGTCATCTATaGTACAGTGCACCCACAAAA +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHIFCHL*YSAPTK
Trigger: TTTTGTGGGTGCACTGTAGCATAGATGACAGAATAT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAACACTCAGGCCCCATaGTTTGAAAACAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINNTQAP*FENKSW
Trigger: CCAACTCTTGTTTTCAAAGCATGGGGCCTGAGTGTT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGGGCCGGATCACTGTaGATCCCTCCAGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVWAGSL*IPPGRT
Trigger: TGTCCTTCCTGGAGGGATGCACAGTGATCCGGCCCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTAGACAGCCTCGACTCTaGTACCACCGTGCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVRQPRL*YHRALS
Trigger: AGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCGTGATCACGGGGAATaGAGGCTTGTCCGAGGAACG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNRDHGE*RLVRGT
Trigger: CGTTCCTCGGACAAGCCTGCATTCCCCGTGATCACG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTGTGGCAGGGACCCATaGATCTCTTTCTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINCGRDP*ISFLIN
Trigger: ATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCATTCCTGGGGTCCATaGCAAACACCGTCCCGCGGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSHSWGP*QTPSRG
Trigger: ACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGCCATGTAACCATTCCTaGGGTCCATGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVEPCNHS*GPWQTP
Trigger: CGGTGTTTGCCATGGACCCCAGGAATGGTTACATGG...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACCATGTAACCATTCCTaGGGTCCATGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRPCNHS*GPWQTP
Trigger: CGGTGTTTGCCATGGACCCCAGGAATGGTTACATGG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGGAAGTCATATGCAATaGAGGAATCGGAGATGGATC +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINGSHMQ*RNRRWI
Trigger: GATCCATCTCCGATTCCTCCATTGCATATGACTTCC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACTCGGAAGCAGCAGTaGGGTTCCGGTGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTRKQQ*GSGVGR
Trigger: TCTCCCCACACCGGAACCCCACTGCTGCTTCCGAGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGGCTGACTCCTGCATaGGGCGCATCTGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGLTPA*GASVGL
Trigger: GAGCCCTACAGATGCGCCCCATGCAGGAGTCAGCCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGATATTCCATGTGGATaGCCCCCGTGCCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFDIPCG*PPCRRW
Trigger: CCACCGCCGGCACGGGGGCCATCCACATGGAATATC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCAGGGTGGATGAGTaGAGGGCTGTGTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGRVDE*RAVSKG
Trigger: GCCTTTGGACACAGCCCTCCACTCATCCACCCTGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACTGCAGACTCACTCGTaGGCTTGTTCTGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLQTHS*ACSVRT
Trigger: AGTCCTCACAGAACAAGCCCACGAGTGAGTCTGCAG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCATATGGTTTCTCATTaGAATGCGTTCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDHMVSH*NAFCFG
Trigger: ACCAAAACAGAACGCATTCCAATGAGAAACCATATG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCGTGCTCCATCCATTTaGTCCCTGCCGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNRAPSI*SLPGFS
Trigger: GGAGAAACCCGGCAGGGACCAAATGGATGGAGCACG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACCTCATCGTTCAGGTTaGCATCAGCGTCCATGGTCA +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRPHRSG*HQRPWS
Trigger: TGACCATGGACGCTGATGCCAACCTGAACGATGAGG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAGGGCATGGAACTGCTaGCCAGCGTGGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFRAWNC*PAWLSG
Trigger: GCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAAGGGGTTCTGCGGGTaGACGACCATGCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSKGFCG*TTMPLQ
Trigger: CTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGAGCATCAAGTGCTCTaGGCCACCGTAGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVEHQVL*ATVGVA
Trigger: AGCAACCCCTACGGTGGCCCAGAGCACTTGATGCTC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGAGCATCAAGTGCTCTaGGCCACCGTAGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNEHQVL*ATVGVA
Trigger: AGCAACCCCTACGGTGGCCCAGAGCACTTGATGCTC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGAAGGCGTTTCCACTaGTGCCACTTCCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGRRFH*CHFRGC
Trigger: ACAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATTACAGGGCTGTTCATaGAAGGCGTTTCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVLQGCS*KAFPLV
Trigger: CACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGGCCGAAATTCAGCTaGCCCCCGCTCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRPKFS*PPLPCM
Trigger: CATGCAAGGGAGCGGGGGCCAGCTGAATTTCGGCCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTACCCCTGTCCCACTaGGTCCTGGTTCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVPLSH*VLVLHA
Trigger: GGCATGCAGAACCAGGACCCAGTGGGACAGGGGTAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGGCAGGCAGCTCTCTaGCCCTTGGTAGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRWQAAL*PLVDVD
Trigger: ATCAACATCTACCAAGGGCCAGAGAGCTGCCTGCCA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGTAACTCAGAGTTTTTaGCGCTGGTCCCCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNVTQSF*RWSPVA
Trigger: TGCTACAGGGGACCAGCGCCAAAAACTCTGAGTTAC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGTAACTCAGAGTTTTTaGCGCTGGTCCCCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVVTQSF*RWSPVA
Trigger: TGCTACAGGGGACCAGCGCCAAAAACTCTGAGTTAC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACACCCCTTCCAGGTCATaGCTGTCGAGGCTGTCCACT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNTPSRS*LSRLST
Trigger: AGTGGACAGCCTCGACAGCCATGACCTGGAAGGGGT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACATCAGGCTGGAGTaGTCCCCATCGTCTATGATG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKDIRLE*SPSSMM
Trigger: CATCATAGACGATGGGGACCACTCCAGCCTGATGTC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCCCCGACATCAGGCTaGAGTGGTCCCCATCGTCTA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPPTSG*SGPHRL
Trigger: TAGACGATGGGGACCACTCCAGCCTGATGTCGGGGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGTTCTGAATGATACTTaGGCTCAGGGCCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKVLNDT*AQGPRH
Trigger: ATGTCGGGGGCCCTGAGCCCAAGTATCATTCAGAAC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGTTCTGAATGATACTTaGGCTCAGGGCCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRVLNDT*AQGPRH
Trigger: ATGTCGGGGGCCCTGAGCCCAAGTATCATTCAGAAC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTATGGTAACTGAGAAATaGAGGTTGCATCCGAGAATA +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILMVTEK*RLHPRI
Trigger: TATTCTCGGATGCAACCTCCATTTCTCAGTTACCAT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAAGACAACAACAGTGGTaGGCCGGATCACTGTGCATC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKRQQQW*AGSLCI
Trigger: GATGCACAGTGATCCGGCCCACCACTGTTGTTGTCT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACAGACCTTCCTTCCACTaGACTGCCACAACAGATCAC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNRPSFH*TATTDH
Trigger: GTGATCTGTTGTGGCAGTCCAGTGGAAGGAAGGTCT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAGACCTTCCTTCCACTaGACTGCCACAACAGATCAC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVRPSFH*TATTDH
Trigger: GTGATCTGTTGTGGCAGTCCAGTGGAAGGAAGGTCT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGTGCACACACAGCCTTaGAGTGCTGATTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKVHTQP*SADWAT
Trigger: TGTTGCCCAATCAGCACTCCAAGGCTGTGTGTGCAC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGGACTGGGCCTCCATaGTGTCTTCTCATTACTTCA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGTGPP*CLLITS
Trigger: TGAAGTAATGAGAAGACATCATGGAGGCCCAGTCCC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGCTCTTTCTTGATCAATaGGGCCCTCTCGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVELFLDQ*GPLVTR
Trigger: TCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAG...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACTCTTTCTTGATCAATaGGGCCCTCTCGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLFLDQ*GPLVTR
Trigger: TCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGACATGGATCTCTTTCTTaGTCAATGAGGCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRHGSLS*SMRPSR
Trigger: ACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATG...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCATGGATCTCTTTCTTaGTCAATGAGGCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNHGSLS*SMRPSR
Trigger: ACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGTATTCTGCTGGGCTaGCTCCTGCATGGGGCGCAT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSILLG*LLHGAH
Trigger: ATGCGCCCCATGCAGGAGTCAGCCCAGCAGAATACT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCCGGCGGTGGCAGCTaGGGGAATAATGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAGGGS*GNNVCI
Trigger: TATGCAGACATTATTCCCTCAGCTGCCACCGCCGGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCGGCTTAGGATCTGCTaGTGCATGTGGAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNRLRIC*CMWRET
Trigger: CGTCTCTCTCCACATGCATCAGCAGATCCTAAGCCG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCGTGGGCTTGTTCTGTaGGGACTCAGAAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFRGLVL*GLRRAG
Trigger: TCCGGCCCTTCTGAGTCCTCACAGAACAAGCCCACG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGTCTTCATCGGGTTTaGTCTTGGACCTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGLHRV*SWTSCC
Trigger: ACAACAAGAGGTCCAAGATCAAACCCGATGAAGACC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGGTTTCTGCTCTCTTaGGCAGTCCAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGFLLS*AVQPPA
Trigger: TGCAGGTGGCTGGACTGCTCAAGAGAGCAGAAACCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGGCGACCTGGACTGTaGATGGCTGCCGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRRPGL*MAAGIS
Trigger: AGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGTTGGCTGCTGCATaGAGACTGACCACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLLAAA*RLTTRA
Trigger: AGCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTTTCATCGATGGCACTaGGGTCTCCTATACTACCTC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNFHRWH*GLLYYL
Trigger: GAGGTAGTATAGGAGACCTCAGTGCCATCGATGAAA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTGTGCCATTTCCTATaGGAGGAGAGACCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVCHFL*EERPQG
Trigger: CCCCTGCGGTCTCTCCTCTCATAGGAAATGGCACAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCACTGGCTGCCTGTTaGGACAGTTCCCATACTGCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPLAAC*DSSHTA
Trigger: CGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTCAGCTTTGAGGCTTaGATCCCGGCACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVFSFEA*IPAPQA
Trigger: TGCCTGTGGTGCCGGGATTCAAGCCTCAAAGCTGAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGTGCTCTTCAGCTTTaGGGCTTGAATCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGALQL*GLNPGT
Trigger: GGTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATGGCTGGTAGCCCCTaGCAACTGCCAAGCTTGACG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSMAGSP*QLPSLT
Trigger: CGTCAAGCTTGGCAGTTGTCAGGGGCTACCAGCCAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGCTTTCGTGTCTTGCTaGCTGAAGCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVAFVSC*LKPTVW
Trigger: CCAAACCGTGGGCTTCAGTCAGCAAGACACGAAAGC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAACTGTGCTTGTCACCTaGTTAGCACCTGGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRTVLVT*LAPGES
Trigger: ACTTTCCCCAGGTGCTAATCAGGTGACAAGCACAGT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAACTGTGCTTGTCACCTaGTTAGCACCTGGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKTVLVT*LAPGES
Trigger: ACTTTCCCCAGGTGCTAATCAGGTGACAAGCACAGT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACTGGAAGAGCCCTCTaGTGGAGGAGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTGRAL*WRRSAW
Trigger: CCATGCTGACCTCCTCCATCAGAGGGCTCTTCCAGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCTTGTTCAATAAAGTTTaGGAGTCAGTGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVLFNKV*ESVQTG
Trigger: GCCTGTCTGCACTGACTCTCAAACTTTATTGAACAA...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTGGACATTCTGTGGCTaGATAGTGATTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINWTFCG*IVIAFL
Trigger: AAGAAACGCAATCACTATGCAGCCACAGAATGTCCA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCTGGACATTCTGTGGCTaGATAGTGATTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVWTFCG*IVIAFL
Trigger: AAGAAACGCAATCACTATGCAGCCACAGAATGTCCA...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCTGATGATAGTATTCTaGTGGGCTGACTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLMIVF*WADSCM
Trigger: CATGCAGGAGTCAGCCCAGCAGAATACTATCATCAG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACACCAGTGCTGCTCACTaGAGACTCACTCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNTSAAH*RLTRGL
Trigger: AAGCCCACGAGTGAGTCTGCAGTGAGCAGCACTGGT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCGGGTCACCAGTGCTaGTCACTGCAGACTCACTCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSGHQC*SLQTHS
Trigger: CGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCATCGGGTCACCAGTaGTGCTCACTGCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSASGHQ*CSLQTH
Trigger: GTGAGTCTGCAGTGAGCAGCACTGGTGACCCGATGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGCTTTGAAGGGTTTCTaGTCTCTTGAGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKALKGF*SLEQSS
Trigger: GCTGGACTGCTCAAGAGAGCAGAAACCCTTCAAAGC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGACTGTGAATGGCTaGCGGAATCTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWTVNG*RNLSGV
Trigger: CACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGGGGGACTGTTGGCTaGTGCATGAAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVWGTVG*CMKTDH
Trigger: GTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGGCCCACCCAAGCTaGAGGTGTTGTTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWAHPS*RCCWTV
Trigger: CACAGTCCAACAACACCTGCAGCTTGGGTGGGCCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTCTGAAGCACGAGACTaGGCTTCTCCGCGGACGTGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSEARD*ASPRTW
Trigger: CCACGTCCGCGGAGAAGCGCAGTCTCGTGCTTCAGA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGCGGGTGGACGACCATaGCGTTGCAGAACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFAGGRP*RCRTQR
Trigger: CCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGGCGTTTCCACTGGTaGCACTTCCGGGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRRFHW*HFRGCC
Trigger: ACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGCATGCCATTCACCATaGTGCCAGCTGACTCATTTG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKACHSP*CQLTHL
Trigger: CAAATGAGTCAGCTGGCAGCATGGTGAATGGCATGC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGAGCTGTCCTGACTaGAGAGCAAGGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLSCPD*RARLSL
Trigger: GAGGGACAGCCTTGCTCTGCAGTCAGGACAGCTCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTTTCCTAAAGCCTATTaGATAACTGCAAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDFPKAY*ITARNL
Trigger: CAAATTCCTTGCAGTTATGCAATAGGCTTTAGGAAA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGGCCGGATCACTGTaGATCCCTCCAGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWAGSL*IPPGRT
Trigger: TGTCCTTCCTGGAGGGATGCACAGTGATCCGGCCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGACAGCCTCGACTCTaGTACCACCGTGCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRQPRL*YHRALS
Trigger: AGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTTTATTTTACATGTCTaGAGGATACACAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHFILHV*RIHKGN
Trigger: GTTACCCTTGTGTATCCTGCAGACATGTAAAATAAA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGAAGTTAACAAATCCCTaGCCCCAGAGAGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVEKLTNP*PQRAAQ
Trigger: TTGGGCAGCTCTCTGGGGGCAGGGATTTGTTAACTT...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp TGTTATAGCATCCATATGATTCTGTTTTCCTTTCTACGAATAGCGTCAGTGCAGGTGGAGCTGTGGGACTaGGCCTCCATGATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: CYSIHMILFSFLRIASVQVELWD*ASMMSS
Trigger: AGAAGACATCATGGAGGCCCAGTCCCACAGCTCCAC...CTGCACTGACGCTATTCGTAGAAAGGAAAACAGAATCATATGGATGCTATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS-3UTR CCA 90 bp GTTTGGAAGTCAACGTGTAGGTTGAGTGCCAAAATAGAGATTACTACATTCCATTCTTTTCAGTGGTCGTaGAGCTGTGGGACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VWKSTCRLSAKIEITTFHSFQWS*SCGTGP
Trigger: AGGCCCAGTCCCACAGCTCCACGACCACTGAAAAGA...ATGGAATGTAGTAATCTCTATTTTGGCACTCAACCTACACGTTGACTTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAATGTCTGGCATCAATTaGTACAGGAGGATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVMSGIN*YRRMEG
Trigger: GCCTTCCATCCTCCTGTACCAATTGATGCCAGACAT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAGTGGGGTTCCGGTGTaGGGAGATCCTAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSGVPV*GDPNEG
Trigger: CCCTTCATTAGGATCTCCCCACACCGGAACCCCACT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTACTCGGAAGCAGCAGTaGGGTTCCGGTGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFTRKQQ*GSGVGR
Trigger: TCTCCCCACACCGGAACCCCACTGCTGCTTCCGAGT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGGTTGCTGAGATCATaGAGAGCGATGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGLLRS*RAMGCC
Trigger: ACAGCAGCCCATCGCTCTCCATGATCTCAGCAACCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAAATAGGCCTCTGTGTTaGAAAAGTTGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKNRPLC*KSWGRV
Trigger: CACCCTGCCCCAACTTTTCCAACACAGAGGCCTATT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGCACAAGCTGCTCTTaGGTGTCGAACTCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCTSCS*VSNSLA
Trigger: CGCGAGGGAGTTCGACACCCAAGAGCAGCTTGTGCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTGGTCGTTATTTATATaGTGCACAAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINWSLFI*CTSCSW
Trigger: CCAAGAGCAGCTTGTGCACCATATAAATAACGACCA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACACGCTTAGTGCAGCCTaGGATTTTGCACACATATGG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNTLSAA*DFAHIW
Trigger: CCATATGTGTGCAAAATCCCAGGCTGCACTAAGCGT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAACGCTTAGTGCAGCCTaGGATTTTGCACACATATGG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVTLSAA*DFAHIW
Trigger: CCATATGTGTGCAAAATCCCAGGCTGCACTAAGCGT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTTGACGGTTTTCACCTaGAGGCATTCTTCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLTVFT*RHSSRF
Trigger: AAAGCGGGAAGAATGCCTCCAGGTGAAAACCGTCAA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGCCGGGTTTCTCCTaGCTTGCAAAGCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLPGFS*LAKQGL
Trigger: CAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCGTGCTCCATCCATTTaGTCCCTGCCGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRAPSI*SLPGFS
Trigger: GGAGAAACCCGGCAGGGACCAAATGGATGGAGCACG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGAGCATCAAGTGCTCTaGGCCACCGTAGGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSEHQVL*ATVGVA
Trigger: AGCAACCCCTACGGTGGCCCAGAGCACTTGATGCTC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTTCCGGGGCTGTTGTaGAGCATCAAGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLPGLL*SIKCSG
Trigger: CCCAGAGCACTTGATGCTCCACAACAGCCCCGGAAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGCACCAGGGGCCACTaGCTGCCTGTTGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCTRGH*LPVETV
Trigger: AACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCCAAAGCTGGCACATaGCTGGTAGCCCCTGACAAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPKAGT*LVAPDN
Trigger: GTTGTCAGGGGCTACCAGCCATGTGCCAGCTTTGGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTTAGAGCACAGCGGATaGGGCTGCCCTTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLEHSG*GCPFIS
Trigger: GGAGATGAAAGGGCAGCCCCATCCGCTGTGCTCTAA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTAGAGCACAGCGGATaGGGCTGCCCTTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVLEHSG*GCPFIS
Trigger: GGAGATGAAAGGGCAGCCCCATCCGCTGTGCTCTAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCAGAGTTTTTGGCGCTaGTCCCCTGTAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSQSFWR*SPVAGS
Trigger: GCTGCCTGCTACAGGGGACCAGCGCCAAAAACTCTG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGTAACTCAGAGTTTTTaGCGCTGGTCCCCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRVTQSF*RWSPVA
Trigger: TGCTACAGGGGACCAGCGCCAAAAACTCTGAGTTAC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACCCCTTCCAGGTCATaGCTGTCGAGGCTGTCCACT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTPSRS*LSRLST
Trigger: AGTGGACAGCCTCGACAGCCATGACCTGGAAGGGGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGTTGGTGGTGCTCATaGACAGCGCTGGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNCWWCS*TALGMG
Trigger: TCCCATTCCCAGCGCTGTCCATGAGCACCACCAACA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAAGACCTTCCTTCCACTaGACTGCCACAACAGATCAC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRRPSFH*TATTDH
Trigger: GTGATCTGTTGTGGCAGTCCAGTGGAAGGAAGGTCT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AAATATAAGAATAGCAGGTTGACTCATACAAATCAGTGTGCCCAGATAGGCAGTGGCTCTCAGCAGACATaGAGGGACCCAGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KYKNSRLTHTNQCAQIGSGSQQT*RDPERS
Trigger: ACTTCTCTCTGGGTCCCTCCATGTCTGCTGAGAGCC...ACTGCCTATCTGGGCACACTGATTTGTATGAGTCAACCTGCTATTCTTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACTCGTCACTCGATGTTaGAGGTTCCTCACTGACTTT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLVTRC*RFLTDF
Trigger: AAAGTCAGTGAGGAACCTTCAACATCGAGTGACGAG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGCCGGCGGTGGCAGCTaGGGGAATAATGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFAGGGS*GNNVCI
Trigger: TATGCAGACATTATTCCCTCAGCTGCCACCGCCGGC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCGGCTTAGGATCTGCTaGTGCATGTGGAGAGAGACG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRLRIC*CMWRET
Trigger: CGTCTCTCTCCACATGCATCAGCAGATCCTAAGCCG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGTCTTCATCGGGTTTaGTCTTGGACCTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGLHRV*SWTSCC
Trigger: ACAACAAGAGGTCCAAGATCAAACCCGATGAAGACC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGGTTTCTGCTCTCTTaGGCAGTCCAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGFLLS*AVQPPA
Trigger: TGCAGGTGGCTGGACTGCTCAAGAGAGCAGAAACCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAGGCGACCTGGACTGTaGATGGCTGCCGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFRRPGL*MAAGIS
Trigger: AGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTGGCTTCTCTGCCTTaGCGGTTTTCACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLASLP*RFSPGG
Trigger: GCCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCACCAGGGCTTGGCTaGGATGTCATTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPPGLG*DVIGFS
Trigger: AGAGAAGCCAATGACATCTCAGCCAAGCCCTGGTGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGTTGGAATAGTTGCTaGTGGGGGACTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNCWNSC*WGTVGC
Trigger: GCAGCCAACAGTCCCCCATCAGCAACTATTCCAACA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCTGACTTCGTTCCACTaGATGGGCAGGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVLTSFH*MGRSVL
Trigger: CAAAACCGACCTGCCCATTCAGTGGAACGAAGTCAG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCCACTGGCTGCCTGTTaGGACAGTTCCCATACTGCG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFPLAAC*DSSHTA
Trigger: CGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTCAGCTTTGAGGCTTaGATCCCGGCACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSFSFEA*IPAPQA
Trigger: TGCCTGTGGTGCCGGGATTCAAGCCTCAAAGCTGAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCTGACTTGTGTCACTaGGCTGTCCTGACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSDLCH*AVLTAE
Trigger: CTCTGCAGTCAGGACAGCTCAGTGACACAAGTCAGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACTTTCATCTCCATCTTaGTACCATTCACCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLSSPS*YHSPCR
Trigger: CCTGCAGGGTGAATGGTATCAAGATGGAGATGAAAG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACTTTCATCTCCATCTTaGTACCATTCACCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLSSPS*YHSPCR
Trigger: CCTGCAGGGTGAATGGTATCAAGATGGAGATGAAAG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCTTTCGTGTCTTGCTaGCTGAAGCCCACGGTTTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAFVSC*LKPTVW
Trigger: CCAAACCGTGGGCTTCAGTCAGCAAGACACGAAAGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCAATAGACAGGGTGTaGAAAAAGGCATCCACACAG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSIDRV*KKASTQ
Trigger: CTGTGTGGATGCCTTTTTTCACACCCTGTCTATTGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCAATAGACAGGGTGTaGAAAAAGGCATCCACACAG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSIDRV*KKASTQ
Trigger: CTGTGTGGATGCCTTTTTTCACACCCTGTCTATTGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTACTGGAAGAGCCCTCTaGTGGAGGAGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFTGRAL*WRRSAW
Trigger: CCATGCTGACCTCCTCCATCAGAGGGCTCTTCCAGT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAGCCAAACATTGAGCTaGAACTTGCATCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSQTLS*NLHLLQ
Trigger: TTGCAGGAGATGCAAGTTTCAGCTCAATGTTTGGCT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGTTCAAAACAACACATaGAACCAGGATACAAGACAG +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINVQNNT*NQDTRQ
Trigger: CTGTCTTGTATCCTGGTTTCATGTGTTGTTTTGAAC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCCTTCCCTACCCAGTACAGTCAGCAAAGCACACTCATGAAACCGGGTGAAGAAATAAGAATAGCAGGTTaGCTCATACAAATCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SFPTQYSQQSTLMKPGEEIRIAG*LIQISV
Trigger: CACACTGATTTGTATGAGTCAACCTGCTATTCTTAT...TTCTTCACCCGGTTTCATGAGTGTGCTTTGCTGACTGTACTGGGTAGGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCCAACTTCTCTTGGTaGGCTCTCTCTAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSANFSW*ALSSCA
Trigger: TGCGCAGCTAGAGAGAGCTCACCAAGAGAAGTTGGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479210.1
ENST00000677288.1
CDS-3UTR TCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCCATCCTCTTAGCAAATaGCTTGCAGAACAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVHPLSK*LAEQKR
Trigger: TCTTTTCTGTTCTGCAAGTCATTTGCTAAGAGGATG...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR TCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCTTACAGAGAATTTGCTaGCTACTACAAGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVLQRIC*LLQGNS
Trigger: GGAGTTACCTTGTAGTAGTCAGCAAATTCTCTGTAA...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCAAAAATGCCCTGGTaGCGCTGTAGTGCACGTCTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPKMPW*RCSARL
Trigger: CAGACGTGCACTACAGCGTCACCAGGGCATTTTTGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAAGGCGGAAGTCATATaGAATGGAGGAATCGGAGAT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVKAEVI*NGGIGD
Trigger: ATCTCCGATTCCTCCATTGCATATGACTTCCGCCTT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGAGAGCGATGGGCTaGTGTGCAAGGAGCGGATAT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWRAMG*CARSGY
Trigger: ATATCCGCTCCTTGCACAGCAGCCCATCGCTCTCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACTGATGATAGTATTCTaGTGGGCTGACTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLMIVF*WADSCM
Trigger: CATGCAGGAGTCAGCCCAGCAGAATACTATCATCAG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACCAGTGCTGCTCACTaGAGACTCACTCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTSAAH*RLTRGL
Trigger: AAGCCCACGAGTGAGTCTGCAGTGAGCAGCACTGGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTGGACCTCTTGTTGTaGATCGGGTCACCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVLDLLL*IGSPVL
Trigger: CAGCACTGGTGACCCGATGCACAACAAGAGGTCCAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTAGCAGTCCAGCCACCTaGACACGAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSSPAT*TRTPSS
Trigger: AGAAGAAGGAGTTCGTGTGCAGGTGGCTGGACTGCT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTTGTTGCAACCTTCGTaGTCACAGACGTATGGTTTC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLLQPS*SQTYGF
Trigger: GAAACCATACGTCTGTGAGCACGAAGGTTGCAACAA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTTGAGAAAGCCTTGTTaGAACCTTCGTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLRKPC*NLRAHR
Trigger: TCTGTGAGCACGAAGGTTGCAACAAGGCTTTCTCAA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGGACTGTGAATGGCTaGCGGAATCTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFWTVNG*RNLSGV
Trigger: CACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGGACTGTTGGCTGCTaGATGAAGACTGACCACCAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGTVGC*MKTDHQ
Trigger: CTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGGGGACTGTTGGCTaGTGCATGAAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWGTVG*CMKTDH
Trigger: GTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCATCCATTTGGTCCCTaGCGGGTTTCTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSHPFGP*RVSPGL
Trigger: CAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAGGCGTTTCCACTGGTaGCACTTCCGGGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFRRFHW*HFRGCC
Trigger: ACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGACAGTTCCCATACTaGGGGGCCTTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRQFPY*GALQGC
Trigger: ACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCCCTTGCATGGGGGTaGTCTTCAGCTTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSLAWG*SSALRL
Trigger: AAGCCTCAAAGCTGAAGAGCACCCCCATGCAAGGGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTCCCTTGCATGGGGGTaGTCTTCAGCTTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSLAWG*SSALRL
Trigger: AAGCCTCAAAGCTGAAGAGCACCCCCATGCAAGGGA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCTGAGCTGTCCTGACTaGAGAGCAAGGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLSCPD*RARLSL
Trigger: GAGGGACAGCCTTGCTCTGCAGTCAGGACAGCTCAG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCACAGCGGATGGGGCTaGCCTTTCATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSHSGWG*PFISIL
Trigger: CAAGATGGAGATGAAAGGGCAGCCCCATCCGCTGTG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCTAATTCTACCCAATTaGTTCAATCTACCATCTATC +
Preference number: 4 (lower is better)
Translates to: LSEERLGQSHLNAMPTILLILPN*FNLPSI
Trigger: GATAGATGGTAGATTGAAGCAATTGGGTAGAATTAG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGCAAATCAACCTCCATaGGGAGATTCTTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNANQPP*GDSWSK
Trigger: TTTGGACCAAGAATCTCCGCATGGAGGTTGATTTGC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACAACACTCAGGCCCCATaGTTTGAAAACAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNNTQAP*FENKSW
Trigger: CCAACTCTTGTTTTCAAAGCATGGGGCCTGAGTGTT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAGACAGCCTCGACTCTaGTACCACCGTGCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFRQPRL*YHRALS
Trigger: AGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GGGTTGGAGGAGACTGCTGTCCTGTCACTAATTTTGACAAGACAACTTTTGTGTCTCTTCGACCAAAAATaGCTTTTGCTTTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLEETAVLSLILTRQLLCLFDQK*LLLSRS
Trigger: GGAGCGAGAAAGCAAAAGGCATTTTTGGTCGAAGAG...ACACAAAAGTTGTCTTGTCAAAATTAGTGACAGGACAGCAGTCTCCTCCAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp CCCCTGCTCCATTTGCTTTCTTTAGCGTCTCCTAGAACAAACACTGGTCCAGGTAGCATTTTGAACTCTTaGCAGACTAGTCAAGATGAT +
Preference number: 4 (lower is better)
Translates to: PLLHLLSLASPRTNTGPGSILNS*QTSQDD
Trigger: ATCATCTTGACTAGTCTGGCAAGAGTTCAAAATGCT...ACCTGGACCAGTGTTTGTTCTAGGAGACGCTAAAGAAAGCAAATGGAGCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGCACTTGTGGGCGCTTaGAGACAGACATCTATCCGA +
Preference number: 4 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVALVGA*RQTSIR
Trigger: TCGGATAGATGTCTGTCTGCAAGCGCCCACAAGTGC...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTCTATGTTTAACAGCTaGAAGCTCGGGGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVESMFNS*KLGGQT
Trigger: GGTTTGACCCCCGAGCTTGCAGCTGTTAAACATAGA...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTAAGTTTGAGAGTCAGTaGAGACAGGCTACGCCAGGC +
Preference number: 4 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVKFESQ*RQATPG
Trigger: GCCTGGCGTAGCCTGTCTGCACTGACTCTCAAACTT...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTCGTGGGCTTGTTCTaGTGTGAGGACTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLVGLF*CEDSEG
Trigger: CCCTTCTGAGTCCTCACAGCAGAACAAGCCCACGAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS-3UTR CCA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGATGTGGCAGGGACCCATaGATCTCTTTCTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRCGRDP*ISFLIN
Trigger: ATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACA...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAATGTCTGGCATCAATTaGTACAGGAGGATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRMSGIN*YRRMEG
Trigger: GCCTTCCATCCTCCTGTACCAATTGATGCCAGACAT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGTGGGGTTCCGGTGTaGGGAGATCCTAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSGVPV*GDPNEG
Trigger: CCCTTCATTAGGATCTCCCCACACCGGAACCCCACT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGGTTGCTGAGATCATaGAGAGCGATGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGLLRS*RAMGCC
Trigger: ACAGCAGCCCATCGCTCTCCATGATCTCAGCAACCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGACAGCCTGGGGCTaGAGAATCTGGTGCTATCCA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLTAWG*RIWCYP
Trigger: TGGATAGCACCAGATTCTCCAGCCCCAGGCTGTCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCTGTGTTGGAAAAGTTaGGGCAGGGTGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVLCWKS*GRVDEW
Trigger: CCACTCATCCACCCTGCCCCAACTTTTCCAACACAG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCTGTGTTGGAAAAGTTaGGGCAGGGTGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLCWKS*GRVDEW
Trigger: CCACTCATCCACCCTGCCCCAACTTTTCCAACACAG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAACCGTAGGGATCCCTaGAATAGGCCTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNNRRDP*NRPLCW
Trigger: CCAACACAGAGGCCTATTCCAGGGATCCCTACGGTT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCTGCAGACTCACTCGTaGGCTTGTTCTGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLQTHS*ACSVRT
Trigger: AGTCCTCACAGAACAAGCCCACGAGTGAGTCTGCAG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTTCTGTTTTGGTGTTTaGCGCGATCAGAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNFCFGV*RDQRHL
Trigger: CAAATGCCTCTGATCGCGCCAAACACCAAAACAGAA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGTGACATGAGCCTCTaGGCCATGCACTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGDMSL*AMHCLH
Trigger: GTGAAGACAGTGCATGGCCCAGAGGCTCATGTCACC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCTGACCACCAGGGCTTaGCTGAGATGTCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVLTTRA*LRCHWL
Trigger: AAGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAAGCTGCAGGTGTTGTTaGACTGTGTGCCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSCRCC*TVCHFL
Trigger: TAGGAAATGGCACACAGTCCAACAACACCTGCAGCT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCTTCCGGGGCTGTTGTaGAGCATCAAGTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLPGLL*SIKCSG
Trigger: CCCAGAGCACTTGATGCTCCACAACAGCCCCGGAAG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGCACCAGGGGCCACTaGCTGCCTGTTGAGACAGTT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFCTRGH*LPVETV
Trigger: AACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGTCCCACTGGGTCCTaGTTCTGCATGCCATTCACC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCPTGS*FCMPFT
Trigger: GGTGAATGGCATGCAGAACCAGGACCCAGTGGGACA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTAGAGCACAGCGGATaGGGCTGCCCTTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLEHSG*GCPFIS
Trigger: GGAGATGAAAGGGCAGCCCCATCCGCTGTGCTCTAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTACCCCTTCCAGGTCATaGCTGTCGAGGCTGTCCACT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFTPSRS*LSRLST
Trigger: AGTGGACAGCCTCGACAGCCATGACCTGGAAGGGGT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGTTGGTGGTGCTCATaGACAGCGCTGGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCWWCS*TALGMG
Trigger: TCCCATTCCCAGCGCTGTCCATGAGCACCACCAACA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACATAAAAGTAGCAATGTaGCTGAGTGTCACCAACTGT +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINIKVAM*LSVTNC
Trigger: ACAGTTGGTGACACTCAGCCACATTGCTACTTTTAT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTGTATCAAATGCACGTaGGGAGTAGCTGCACTTCAA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNCIKCT*GVAALQ
Trigger: TTGAAGTGCAGCTACTCCCCACGTGCATTTGATACA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGGAGGAGGTCAGCATaGTCCCTTCCACCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFWRRSA*SLPPKL
Trigger: GAGCTTGGGTGGAAGGGACCATGCTGACCTCCTCCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAATCCGAGAATACTACTaGAAGAGCCCTCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKIREYY*KSPLME
Trigger: CTCCATCAGAGGGCTCTTCCAGTAGTATTCTCGGAT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAATCCGAGAATACTACTaGAAGAGCCCTCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRIREYY*KSPLME
Trigger: CTCCATCAGAGGGCTCTTCCAGTAGTATTCTCGGAT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTAGACAACAACAGTGGTaGGCCGGATCACTGTGCATC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVRQQQW*AGSLCI
Trigger: GATGCACAGTGATCCGGCCCACCACTGTTGTTGTCT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATTGGGCAACACCAACTaGTCCCTCTCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLGNTN*SLSLTR
Trigger: TCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CCCCTGCTCCATTTGCTTTCTTTAGCGTCTCCTAGAACAAACACTGGTCCAGGTAGAATACAGAAACAGTaGCTCTGTGTTATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PLLHLLSLASPRTNTGPGRIQKQ*LCVISE
Trigger: TTCAGAGATAACACAGAGCCACTGTTTCTGTATTCT...ACCTGGACCAGTGTTTGTTCTAGGAGACGCTAAAGAAAGCAAATGGAGCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACAGTCCCCAGGCTCTaGCTAGCTACTTTGCGCCAA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTVPRL*LATLRQ
Trigger: TTGGCGCAAAGTAGCTAGCCAGAGCCTGGGGACTGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479210.1
ENST00000677288.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCTCTTTCTTGATCAATaGGGCCCTCTCGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVLFLDQ*GPLVTR
Trigger: TCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACATAGGAGCCACTTGCTaGAGAGCTGCTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNIGATC*RAATGI
Trigger: AATTCCCGTAGCAGCTCTTCAGCAAGTGGCTCCTAT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTATAGGAGCCACTTGCTaGAGAGCTGCTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVIGATC*RAATGI
Trigger: AATTCCCGTAGCAGCTCTTCAGCAAGTGGCTCCTAT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAACATATACTGGGCTTTaGAGGGTTTCTGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRTYTGL*RVSALL
Trigger: CAAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGCGATCAGAGGCATTTaGGAAAGCCTTGTTGCAACC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNAIRGI*ESLVAT
Trigger: GGTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCATTCTTCCCGCTTTaGGGTAGTGTTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAFFPL*GSVAEV
Trigger: GACCTCAGCAACACTACCTCAAAGCGGGAAGAATGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCCACCAGGGCTTGGCTaGGATGTCATTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFPPGLG*DVIGFS
Trigger: AGAGAAGCCAATGACATCTCAGCCAAGCCCTGGTGG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGTTGGAATAGTTGCTaGTGGGGGACTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCWNSC*WGTVGC
Trigger: GCAGCCAACAGTCCCCCATCAGCAACTATTCCAACA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGACTTCGTTCCACTaGATGGGCAGGTCGGTTTTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLTSFH*MGRSVL
Trigger: CAAAACCGACCTGCCCATTCAGTGGAACGAAGTCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCTGACTTGTGTCACTaGGCTGTCCTGACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSDLCH*AVLTAE
Trigger: CTCTGCAGTCAGGACAGCTCAGTGACACAAGTCAGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACTCTTCAACTCCTATTaGTTTCCGTTGGTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLFNSY*FPLVAV
Trigger: GACTGCAACCAACGGAAATCAATAGGAGTTGAAGAG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCACATCTCAGTTAGGTaGGATGAGATTGCTAAAATA +
Preference number: 4 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINHISVR*DEIAKI
Trigger: TATTTTAGCAATCTCATCTCACCTAACTGAGATGTG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGCACACTTACAGACATaGAGAGCTGAAAACCAAAAC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNAHLQT*RAENQN
Trigger: GTTTTGGTTTTCAGCTCTTCATGTCTGTAAGTGTGC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCAATAGACAGGGTGTaGAAAAAGGCATCCACACAG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSIDRV*KKASTQ
Trigger: CTGTGTGGATGCCTTTTTTCACACCCTGTCTATTGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGTGAGACTGGATCTCTaGTTCTGTGACAACATTATG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVVRLDL*FCDNIM
Trigger: CATAATGTTGTCACAGAATCAGAGATCCAGTCTCAC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGCCACAACAGATCACTaGAATTCTGGAGGAGTATAC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRATTDH*NSGGVY
Trigger: GTATACTCCTCCAGAATTTCAGTGATCTGTTGTGGC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTTGGAGGCTGGGGGTaGGTCTCAAGATATGAGATG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLGGWG*VSRYEM
Trigger: CATCTCATATCTTGAGACTCACCCCCAGCCTCCAAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AAATATAAGAATAGCAGGTTGACTCATACAAATCAGTGTGCCCAGATAGGCAGTACTCATGAAACCGGGTaGAGAAGTGCAGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KYKNSRLTHTNQCAQIGSTHETG*RSAGEK
Trigger: CTTCTCACCTGCACTTCTTCACCCGGTTTCATGAGT...ACTGCCTATCTGGGCACACTGATTTGTATGAGTCAACCTGCTATTCTTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR TCA 90 bp AAATATAAGAATAGCAGGTTGACTCATACAAATCAGTGTGCCCAGATAGGCAGTAGCAAAGCACACTCATaGAACCGGGTGAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KYKNSRLTHTNQCAQIGSSKAHS*NRVKKC
Trigger: GCACTTCTTCACCCGGTTTCATGAGTGTGCTTTGCT...ACTGCCTATCTGGGCACACTGATTTGTATGAGTCAACCTGCTATTCTTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR TCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCTTACAGAGAATTTGCTaGCTACTACAAGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVLQRIC*LLQGNC
Trigger: ACAGTTACCTTGTAGTAGTCAGCAAATTCTCTGTAA...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642432.1
CDS-3UTR TCA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTCACGGATGGCAGCGTTaGGTTCAGAGTCCTAACTAT +
Preference number: 4 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVHGWQR*VQSPNY
Trigger: ATAGTTAGGACTCTGAACTCAACGCTGCCATCCGTG...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR TCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCCTAATCTTGTTCAGTTaGGCCGAGTTGTTCAATAAA +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVLILFS*AELFNK
Trigger: TTTATTGAACAACTCGGCTCAACTGAACAAGATTAG...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR TCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCATTCATATGAAAACCTaGCAGTATACACACTCCACA +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVIHMKT*QYTHST
Trigger: TGTGGAGTGTGTATACTGTCAGGTTTTCATATGAAT...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTGGACCTCTTGTTGTaGATCGGGTCACCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLDLLL*IGSPVL
Trigger: CAGCACTGGTGACCCGATGCACAACAAGAGGTCCAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTATATGGTGCACAAGCTaGTCTTGGGTGTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVIWCTS*SWVSNS
Trigger: GGAGTTCGACACCCAAGAGCAGCTTGTGCACCATAT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCGTTATTTATATGGTaGACAAGCTGCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSLFIW*TSCSWV
Trigger: CACCCAAGAGCAGCTTGTGCACCATATAAATAACGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCGTTATTTATATGGTaGACAAGCTGCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSLFIW*TSCSWV
Trigger: CACCCAAGAGCAGCTTGTGCACCATATAAATAACGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGCAGTCCAGCCACCTaGACACGAACTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSSPAT*TRTPSS
Trigger: AGAAGAAGGAGTTCGTGTGCAGGTGGCTGGACTGCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGCTTTGAAGGGTTTCTaGTCTCTTGAGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNALKGF*SLEQSS
Trigger: GCTGGACTGCTCAAGAGAGCAGAAACCCTTCAAAGC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGCTTTGAAGGGTTTCTaGTCTCTTGAGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVALKGF*SLEQSS
Trigger: GCTGGACTGCTCAAGAGAGCAGAAACCCTTCAAAGC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCGAGTAGGCCTTTGTaGAACCTTCAAAAGTGCATT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSSRPL*NLQKCI
Trigger: AATGCACTTTTGAAGGTTGCACAAAGGCCTACTCGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATGCAGCCTGGGATTTTaGACACATATGGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVCSLGF*THMVSH
Trigger: ATGAGAAACCATATGTGTGCAAAATCCCAGGCTGCA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCATCCATTTGGTCCCTaGCGGGTTTCTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFHPFGP*RVSPGL
Trigger: CAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAGACAGTTCCCATACTaGGGGGCCTTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFRQFPY*GALQGC
Trigger: ACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCCCTTGCATGGGGGTaGTCTTCAGCTTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSLAWG*SSALRL
Trigger: AAGCCTCAAAGCTGAAGAGCACCCCCATGCAAGGGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGCCATTCACCATGCTaGCAGCTGACTCATTTGGCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCHSPC*QLTHLA
Trigger: CGCCAAATGAGTCAGCTGGCAGCATGGTGAATGGCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACTGGGTCCTGGTTCTaGATGCCATTCACCATGCTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTGSWF*MPFTML
Trigger: CAGCATGGTGAATGGCATGCAGAACCAGGACCCAGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCACAGCGGATGGGGCTaGCCTTTCATCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFHSGWG*PFISIL
Trigger: CAAGATGGAGATGAAAGGGCAGCCCCATCCGCTGTG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAATTGCAGTGTCCCTCTaGTTGTCTCAGGAACATCTA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKIAVSL*LSQEHL
Trigger: TAGATGTTCCTGAGACAAGCAGAGGGACACTGCAAT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATTCCTTCCACTGGACTaGCACAACAGATCACTGAAA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKFLPLD*HNRSLK
Trigger: TTTCAGTGATCTGTTGTGGCAGTCCAGTGGAAGGAA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CCCCTGCTCCATTTGCTTTCTTTAGCGTCTCCTAGAACAAACACTGGTCCAGGTGCTAACAACAAAACCTaGATCTCAGATACTAACATT +
Preference number: 4 (lower is better)
Translates to: PLLHLLSLASPRTNTGPGANNKT*ISDTNI
Trigger: AATGTTAGTATCTGAGATGCAGGTTTTGTTGTTAGC...ACCTGGACCAGTGTTTGTTCTAGGAGACGCTAAAGAAAGCAAATGGAGCAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTTTCAGAAGGCCACAGTaGACAGCTCTAACGACACCA +
Preference number: 4 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVFRRPQ*TALTTP
Trigger: TGGTGTCGTTAGAGCTGTGCACTGTGGCCTTCTGAA...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTGTGGAGCTGTGGGACTaGGCCTCCATGATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PEAKYIGSIYSDRITIKIVELWD*ASMMSS
Trigger: AGAAGACATCATGGAGGCCCAGTCCCACAGCTCCAC...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTCTTTTCAGTGGTCGTaGAGCTGTGGGACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSFQWS*SCGTGP
Trigger: AGGCCCAGTCCCACAGCTCCACGACCACTGAAAAGA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCACATCTGTTCGAGTaGAGCACTTCACTATGGAAT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSHLFE*STSLWN
Trigger: ATTCCATAGTGAAGTGCTCCACTCGAACAGATGTGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTGTGGCAGGGACCCATaGATCTCTTTCTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVECGRDP*ISFLIN
Trigger: ATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACA...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCATGTAACCATTCCTaGGGTCCATGGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPCNHS*GPWQTP
Trigger: CGGTGTTTGCCATGGACCCCAGGAATGGTTACATGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAGTGGGGTTCCGGTGTaGGGAGATCCTAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSGVPV*GDPNEG
Trigger: CCCTTCATTAGGATCTCCCCACACCGGAACCCCACT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTATGATAGTATTCTGCTaGGCTGACTCCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVMIVFC*ADSCMG
Trigger: CCCCATGCAGGAGTCAGCCCAGCAGAATACTATCAT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCGGAGAGTGGTGATATaGACAGTGTACGTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNRRVVI*TVYVFG
Trigger: GCCGAAAACGTACACTGTCCATATCACCACTCTCCG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGTGTTGGAAAAGTTaGGGCAGGGTGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLCWKS*GRVDEW
Trigger: CCACTCATCCACCCTGCCCCAACTTTTCCAACACAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAACCGTAGGGATCCCTaGAATAGGCCTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSNRRDP*NRPLCW
Trigger: CCAACACAGAGGCCTATTCCAGGGATCCCTACGGTT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGCAGACTCACTCGTaGGCTTGTTCTGTGAGGACT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLQTHS*ACSVRT
Trigger: AGTCCTCACAGAACAAGCCCACGAGTGAGTCTGCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGACCACCAGGGCTTaGCTGAGATGTCATTGGCTT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLTTRA*LRCHWL
Trigger: AAGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCTCATCGTTCAGGTTaGCATCAGCGTCCATGGTCA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPHRSG*HQRPWS
Trigger: TGACCATGGACGCTGATGCCAACCTGAACGATGAGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTACCCTGCTTGGTTCTaGGAATTTAAATACTGCACC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNYPAWF*EFKYCT
Trigger: GGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTGCTCGTACCCTGCTTaGTTCTGGGAATTTAAATAC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNCSYPA*FWEFKY
Trigger: GTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTTCGTTCCACTGAATaGGCAGGTCGGTTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLRSTE*AGRFCC
Trigger: GCAGCAAAACCGACCTGCCCATTCAGTGGAACGAAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGTCCCACTGGGTCCTaGTTCTGCATGCCATTCACC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFCPTGS*FCMPFT
Trigger: GGTGAATGGCATGCAGAACCAGGACCCAGTGGGACA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGCAGGCAGCTCTCTaGCCCTTGGTAGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWQAAL*PLVDVD
Trigger: ATCAACATCTACCAAGGGCCAGAGAGCTGCCTGCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTTAGAGCACAGCGGATaGGGCTGCCCTTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLEHSG*GCPFIS
Trigger: GGAGATGAAAGGGCAGCCCCATCCGCTGTGCTCTAA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGACATCAGGCTGGAGTaGTCCCCATCGTCTATGATG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSDIRLE*SPSSMM
Trigger: CATCATAGACGATGGGGACCACTCCAGCCTGATGTC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTTCTGAATGATACTTaGGCTCAGGGCCCCCGACAT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVLNDT*AQGPRH
Trigger: ATGTCGGGGGCCCTGAGCCCAAGTATCATTCAGAAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGAAGTGTAACCCCTTaGTCACAAGCACACCAACTC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVGSVTP*SQAHQL
Trigger: GAGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATGTATCAAATGCACGTaGGGAGTAGCTGCACTTCAA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKCIKCT*GVAALQ
Trigger: TTGAAGTGCAGCTACTCCCCACGTGCATTTGATACA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAAATTCCAGGGGTCAATaGGACAGAATACAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRNSRGQ*DRIQQV
Trigger: TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGCCAAAGTCCCCAGTaGCAAATCAACCTCCATGCG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSQSPQ*QINLHA
Trigger: CGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACAAGACAACAACAGTaGTGGGCCGGATCACTGTGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTRQQQ*WAGSLC
Trigger: GCACAGTGATCCGGCCCACCACTGTTGTTGTCTTGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCAATGTGTGAGGAGTTaGGAGGGGTTAACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNQCVRS*EGLTFS
Trigger: TGAAAAAGTTAACCCCTCCCAACTCCTCACACATTG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AAATATAAGAATAGCAGGTTGACTCATACAAATCAGTGTGCCCAGATAGGCAGTAGTGGCCAGGCTGCTTaGAAGTATATGCCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: KYKNSRLTHTNQCAQIGSSGQAA*KYMPLE
Trigger: CTCTAAGGGCATATACTTCCAAGCAGCCTGGCCACT...ACTGCCTATCTGGGCACACTGATTTGTATGAGTCAACCTGCTATTCTTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CCA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAAAGAGCATCTGCCAATaGACTTTAACAGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRKSICQ*TLTAKH
Trigger: GTGTTTGGCTGTTAAAGTCCATTGGCAGATGCTCTT...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
3UTR CAA 72 bp GTCCCCAGTGGCAAATCAACCTCCATGCGGAGATTCTaGGTCCAAATGAAAGAACATAAACATGAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: VPSGKSTSMRRF*VQMKEHKHEKS
Trigger: ACTTTTCTCATGTTTATGTTCTTTCATTTGGACCAAGAATCTCCGCATGGAGGTTGATTTGCCACTGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTCTTTCTTGATCAATaGGGCCCTCTCGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLFLDQ*GPLVTR
Trigger: TCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCATGGATCTCTTTCTTaGTCAATGAGGCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVHGSLS*SMRPSR
Trigger: ACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGTGCTATCCATAGCATaGAGATATTCCATGTGGATG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRVLSIA*RYSMWM
Trigger: CATCCACATGGAATATCTTCATGCTATGGATAGCAC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATAGGAGCCACTTGCTaGAGAGCTGCTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSIGATC*RAATGI
Trigger: AATTCCCGTAGCAGCTCTTCAGCAAGTGGCTCCTAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCGATCAGAGGCATTTaGGAAAGCCTTGTTGCAACC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAIRGI*ESLVAT
Trigger: GGTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGCATTCTTCCCGCTTTaGGGTAGTGTTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFAFFPL*GSVAEV
Trigger: GACCTCAGCAACACTACCTCAAAGCGGGAAGAATGC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTTCATCGATGGCACTaGGGTCTCCTATACTACCTC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVFHRWH*GLLYYL
Trigger: GAGGTAGTATAGGAGACCTCAGTGCCATCGATGAAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACTGTGCTTGTCACCTaGTTAGCACCTGGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTVLVT*LAPGES
Trigger: ACTTTCCCCAGGTGCTAATCAGGTGACAAGCACAGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCTATGGGAAAGGTTCTaGATGATACTTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLWERF*MILGLR
Trigger: CCTGAGCCCAAGTATCATTCAGAACCTTTCCCATAG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGCACACTTACAGACATaGAGAGCTGAAAACCAAAAC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRAHLQT*RAENQN
Trigger: GTTTTGGTTTTCAGCTCTTCATGTCTGTAAGTGTGC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTCTTGCTTTTTCAACTaGAAAGTGGTAGAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNSCFFN*KVVEPL
Trigger: TAGAGGCTCTACCACTTTTCAGTTGAAAAAGCAAGA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACAGATTTGTGGAAAAGTaGGACTGGATCTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNRFVEK*DWISDS
Trigger: AGAATCAGAGATCCAGTCTCACTTTTCCACAAATCT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCAGGCCCCATGCTTTaGAAACAAGAGTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSGPML*KQELER
Trigger: CCTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGTTCAAAACAACACATaGAACCAGGATACAAGACAG +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVVQNNT*NQDTRQ
Trigger: CTGTCTTGTATCCTGGTTTCATGTGTTGTTTTGAAC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGGCCAGTCACATCTaGACGCTATGCCTACAATAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWASHI*TLCLQY
Trigger: GTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGACATCCTCTTAGCAAATaGCTTGCAGAACAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRHPLSK*LAEQKR
Trigger: TCTTTTCTGTTCTGCAAGTCATTTGCTAAGAGGATG...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATATGGTGCACAAGCTaGTCTTGGGTGTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSIWCTS*SWVSNS
Trigger: GGAGTTCGACACCCAAGAGCAGCTTGTGCACCATAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCGTTATTTATATGGTaGACAAGCTGCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSLFIW*TSCSWV
Trigger: CACCCAAGAGCAGCTTGTGCACCATATAAATAACGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCTTTGAAGGGTTTCTaGTCTCTTGAGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSALKGF*SLEQSS
Trigger: GCTGGACTGCTCAAGAGAGCAGAAACCCTTCAAAGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATCGAGTAGGCCTTTGTaGAACCTTCAAAAGTGCATT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKSSRPL*NLQKCI
Trigger: AATGCACTTTTGAAGGTTGCACAAAGGCCTACTCGA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGGAATTTAAATACTaGACCACGTCGTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWEFKY*TTSSGR
Trigger: CCTGCCGGACGACGTGGTGCAGTATTTAAATTCCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCATGCCATTCACCATaGTGCCAGCTGACTCATTTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSACHSP*CQLTHL
Trigger: CAAATGAGTCAGCTGGCAGCATGGTGAATGGCATGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATTTATGTGTATCAAATaGACGTGGGGAGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKFMCIK*TWGVAA
Trigger: TGCAGCTACTCCCCACGTGCATTTGATACACATAAA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCATAAAAACAAAACTCTaGCAGGCATCACTAACTAAG +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVIKTKL*QASLTK
Trigger: CTTAGTTAGTGATGCCTGGCAGAGTTTTGTTTTTAT...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCTACAGGTTTGCAGTTTaGTCAATTCTTAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVYRFAV*SILNLC
Trigger: ACACAGATTAAGAATTGAGCAAACTGCAAACCTGTA...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCACATCTGTTCGAGTaGAGCACTTCACTATGGAAT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSHLFE*STSLWN
Trigger: ATTCCATAGTGAAGTGCTCCACTCGAACAGATGTGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTATGTCTGGCATCAATTaGTACAGGAGGATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVMSGIN*YRRMEG
Trigger: GCCTTCCATCCTCCTGTACCAATTGATGCCAGACAT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCCCTCATGATGTCTaGCATCAATTGGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGPHDV*HQLVQE
Trigger: CTCCTGTACCAATTGATGCCAGACATCATGAGGGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGAGGAATCGGAGATaGATCGTAATGGTAACGGCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWRNRR*IVMVTA
Trigger: GGCCGTTACCATTACGATCCATCTCCGATTCCTCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATGATAGTATTCTGCTaGGCTGACTCCTGCATGGGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSMIVFC*ADSCMG
Trigger: CCCCATGCAGGAGTCAGCCCAGCAGAATACTATCAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCGGAGAGTGGTGATATaGACAGTGTACGTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRRVVI*TVYVFG
Trigger: GCCGAAAACGTACACTGTCCATATCACCACTCTCCG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAATAGGCCTCTGTGTTaGAAAAGTTGGGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSNRPLC*KSWGRV
Trigger: CACCCTGCCCCAACTTTTCCAACACAGAGGCCTATT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGAATGCGTTCTGTTTTaGTGTTTGGCGCGATCAGAG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNECVLF*CLARSE
Trigger: CTCTGATCGCGCCAAACACCAAAACAGAACGCATTC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGAATGCGTTCTGTTTTaGTGTTTGGCGCGATCAGAG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVECVLF*CLARSE
Trigger: CTCTGATCGCGCCAAACACCAAAACAGAACGCATTC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCCTCATCGTTCAGGTTaGCATCAGCGTCCATGGTCA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFPHRSG*HQRPWS
Trigger: TGACCATGGACGCTGATGCCAACCTGAACGATGAGG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGCTCGTACCCTGCTTaGTTCTGGGAATTTAAATAC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRCSYPA*FWEFKY
Trigger: GTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTACAGGGCTGTTCATaGAAGGCGTTTCCACTGGTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLQGCS*KAFPLV
Trigger: CACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGGCAGGCAGCTCTCTaGCCCTTGGTAGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFWQAAL*PLVDVD
Trigger: ATCAACATCTACCAAGGGCCAGAGAGCTGCCTGCCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTAACTCAGAGTTTTTaGCGCTGGTCCCCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVTQSF*RWSPVA
Trigger: TGCTACAGGGGACCAGCGCCAAAAACTCTGAGTTAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAGCCAAAGTCCCCAGTaGCAAATCAACCTCCATGCG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSQSPQ*QINLHA
Trigger: CGCATGGAGGTTGATTTGCCACTGGGGACTTTGGCT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGAGAACAGCAGGCATaGAAGGGGAATTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGEQQA*KGNCSV
Trigger: GACACTGCAATTCCCCTTCCATGCCTGCTGTTCTCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAATGGTAACTGAGAAATaGAGGTTGCATCCGAGAATA +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVMVTEK*RLHPRI
Trigger: TATTCTCGGATGCAACCTCCATTTCTCAGTTACCAT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGACCTTCCTTCCACTaGACTGCCACAACAGATCAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRPSFH*TATTDH
Trigger: GTGATCTGTTGTGGCAGTCCAGTGGAAGGAAGGTCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGGACTGGGCCTCCATaGTGTCTTCTCATTACTTCA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGTGPP*CLLITS
Trigger: TGAAGTAATGAGAAGACATCATGGAGGCCCAGTCCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCTCTTTCTTGATCAATaGGGCCCTCTCGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLFLDQ*GPLVTR
Trigger: TCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCATGGATCTCTTTCTTaGTCAATGAGGCCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSHGSLS*SMRPSR
Trigger: ACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACATGATCGGAGAGTGGTaGTATGGACAGTGTACGTTT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNMIGEW*YGQCTF
Trigger: AAACGTACACTGTCCATATCACCACTCTCCGATCAT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGTCTTCATCGGGTTTaGTCTTGGACCTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGLHRV*SWTSCC
Trigger: ACAACAAGAGGTCCAAGATCAAACCCGATGAAGACC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAGTTTGTCTCATAGATaGCTTCAGGCTCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSLSHR*LQAPVC
Trigger: GCAAACAGGAGCCTGAAGTCATCTATGAGACAAACT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTTCATCGATGGCACTaGGGTCTCCTATACTACCTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSFHRWH*GLLYYL
Trigger: GAGGTAGTATAGGAGACCTCAGTGCCATCGATGAAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTAGATGTTGATGTGTaGGGTAGCACTAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVDVDV*GSTNLP
Trigger: GGGCAGATTAGTGCTACCTCACACATCAACATCTAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTTTCATCTCCATCTTaGTACCATTCACCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLSSPS*YHSPCR
Trigger: CCTGCAGGGTGAATGGTATCAAGATGGAGATGAAAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTATGGGAAAGGTTCTaGATGATACTTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLWERF*MILGLR
Trigger: CCTGAGCCCAAGTATCATTCAGAACCTTTCCCATAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCACATCTCAGTTAGGTaGGATGAGATTGCTAAAATA +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNHISVR*DEIAKI
Trigger: TATTTTAGCAATCTCATCTCACCTAACTGAGATGTG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTAGTGCGAAACAGCACTaGATGTTCATGAAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSAKQH*MFMKVV
Trigger: CACTACCTTCATGAACATTCAGTGCTGTTTCGCACT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAATTAATAAATGTTACTaGTACAGCCGCTTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKINKCY*YSRLWG
Trigger: ACCCCACAAGCGGCTGTATCAGTAACATTTATTAAT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAAGATTTGTGGAAAAGTaGGACTGGATCTCTGATTCT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRRFVEK*DWISDS
Trigger: AGAATCAGAGATCCAGTCTCACTTTTCCACAAATCT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAGCCAAACATTGAGCTaGAACTTGCATCTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSQTLS*NLHLLQ
Trigger: TTGCAGGAGATGCAAGTTTCAGCTCAATGTTTGGCT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGCCACAACAGATCACTaGAATTCTGGAGGAGTATAC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVATTDH*NSGGVY
Trigger: GTATACTCCTCCAGAATTTCAGTGATCTGTTGTGGC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGGGCCAGTCACATCTaGACGCTATGCCTACAATAC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFWASHI*TLCLQY
Trigger: GTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGATCATCCAAAAGCAAGTaGCATCAAGTCAGATATTCT +
Preference number: 4 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRSSKSK*HQVRYS
Trigger: AGAATATCTGACTTGATGTCACTTGCTTTTGGATGA...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGGCTGCATAGTGATTaGGTTTCTTCTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNWLHSD*VSSLSV
Trigger: CACAGAGAGAGAAGAAACGCAATCACTATGCAGCCA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGATGATAGTATTCTaGTGGGCTGACTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLMIVF*WADSCM
Trigger: CATGCAGGAGTCAGCCCAGCAGAATACTATCATCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTATATGGTGCACAAGCTaGTCTTGGGTGTCGAACTCC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFIWCTS*SWVSNS
Trigger: GGAGTTCGACACCCAAGAGCAGCTTGTGCACCATAT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTGTTGCAACCTTCGTaGTCACAGACGTATGGTTTC +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVLLQPS*SQTYGF
Trigger: GAAACCATACGTCTGTGAGCACGAAGGTTGCAACAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTGAGAAAGCCTTGTTaGAACCTTCGTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVLRKPC*NLRAHR
Trigger: TCTGTGAGCACGAAGGTTGCAACAAGGCTTTCTCAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCCATGTACTCTTTGTaGACACACAGTATGACTTTT +
Preference number: 4 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSMYSL*THSMTF
Trigger: AAAAGTCATACTGTGTGTGCACAAAGAGTACATGGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGCAAATCAACCTCCATaGGGAGATTCTTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVANQPP*GDSWSK
Trigger: TTTGGACCAAGAATCTCCGCATGGAGGTTGATTTGC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTCCTTCCACTGGACTaGCACAACAGATCACTGAAA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVFLPLD*HNRSLK
Trigger: TTTCAGTGATCTGTTGTGGCAGTCCAGTGGAAGGAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GTTTGGAAGTCAACGTGTAGGTTGAGTGCCAAAATAGAGATTACTACATTCCATAAACACTGGTCCAGGTaGAAACGCTCAATTCACAAG +
Preference number: 4 (lower is better)
Translates to: VWKSTCRLSAKIEITTFHKHWSR*KRSIHK
Trigger: CTTGTGAATTGAGCGTTTGCACCTGGACCAGTGTTT...ATGGAATGTAGTAATCTCTATTTTGGCACTCAACCTACACGTTGACTTCCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp GGGTTGGAGGAGACTGCTGTCCTGTCACTAATTTTGACAAGACAACTTTTGTGTATGCTTGAACTGAAATaGCTCTCAACACTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: GLEETAVLSLILTRQLLCMLELK*LSTLCL
Trigger: TAAGCAAAGTGTTGAGAGGCATTTCAGTTCAAGCAT...ACACAAAAGTTGTCTTGTCAAAATTAGTGACAGGACAGCAGTCTCCTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGCAACAGGCAGAAGTCTaGTGCAAAAATGTAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVEQQAEV*CKNVSK
Trigger: TTTGCTTACATTTTTGCAGCAGACTTCTGCCTGTTG...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGTGGCAGGGACCCATaGATCTCTTTCTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNCGRDP*ISFLIN
Trigger: ATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATGTCTGGCATCAATTaGTACAGGAGGATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSMSGIN*YRRMEG
Trigger: GCCTTCCATCCTCCTGTACCAATTGATGCCAGACAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGCCCTCATGATGTCTaGCATCAATTGGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGPHDV*HQLVQE
Trigger: CTCCTGTACCAATTGATGCCAGACATCATGAGGGCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGGAGGAATCGGAGATaGATCGTAATGGTAACGGCC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFWRNRR*IVMVTA
Trigger: GGCCGTTACCATTACGATCCATCTCCGATTCCTCCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGGAAGTCATATGCAATaGAGGAATCGGAGATGGATC +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNGSHMQ*RNRRWI
Trigger: GATCCATCTCCGATTCCTCCATTGCATATGACTTCC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATTAATGTAGGGATGTaGAGGGCTGAAGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSINVGM*RAEGRL
Trigger: GAGTCTCCCTTCAGCCCTCCACATCCCTACATTAAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTCTGTTTTGGTGTTTaGCGCGATCAGAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVFCFGV*RDQRHL
Trigger: CAAATGCCTCTGATCGCGCCAAACACCAAAACAGAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGAATGCGTTCTGTTTTaGTGTTTGGCGCGATCAGAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSECVLF*CLARSE
Trigger: CTCTGATCGCGCCAAACACCAAAACAGAACGCATTC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGATTTTGCACACATATaGTTTCTCATTGGAATGCGT +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNDFAHI*FLIGMR
Trigger: ACGCATTCCAATGAGAAACCATATGTGTGCAAAATC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACGCTTAGTGCAGCCTaGGATTTTGCACACATATGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTLSAA*DFAHIW
Trigger: CCATATGTGTGCAAAATCCCAGGCTGCACTAAGCGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTGACGGTTTTCACCTaGAGGCATTCTTCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLTVFT*RHSSRF
Trigger: AAAGCGGGAAGAATGCCTCCAGGTGAAAACCGTCAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGCTGCAGGTGTTGTTaGACTGTGTGCCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSCRCC*TVCHFL
Trigger: TAGGAAATGGCACACAGTCCAACAACACCTGCAGCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGAAGTGTAACCCCTTaGTCACAAGCACACCAACTC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGSVTP*SQAHQL
Trigger: GAGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAACTGAATTGGAGATaGGGGGAACATCAATATTCT +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKELNWR*GEHQYS
Trigger: AGAATATTGATGTTCCCCCCATCTCCAATTCAGTTC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAATAAAAGTAGCAATGTaGCTGAGTGTCACCAACTGT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRIKVAM*LSVTNC
Trigger: ACAGTTGGTGACACTCAGCCACATTGCTACTTTTAT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATCCGAGAATACTACTaGAAGAGCCCTCTGATGGAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSIREYY*KSPLME
Trigger: CTCCATCAGAGGGCTCTTCCAGTAGTATTCTCGGAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTGGGCAACACCAACTaGTCCCTCTCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLGNTN*SLSLTR
Trigger: TCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGATATCCATGCTCAAGTaGAAGTTAACAAATCCCTGC +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVEISMLK*KLTNPC
Trigger: GCAGGGATTTGTTAACTTCCACTTGAGCATGGATAT...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATGATCGGAGAGTGGTaGTATGGACAGTGTACGTTT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSMIGEW*YGQCTF
Trigger: AAACGTACACTGTCCATATCACCACTCTCCGATCAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGTTTGTCTCATAGATaGCTTCAGGCTCCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSLSHR*LQAPVC
Trigger: GCAAACAGGAGCCTGAAGTCATCTATGAGACAAACT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACATATACTGGGCTTTaGAGGGTTTCTGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTYTGL*RVSALL
Trigger: CAAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAAATGGTTGAGTCCATaGTTGGGGTTTCATCGATGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSKWLSP*LGFHRW
Trigger: CCATCGATGAAACCCCAATCATGGACTCAACCATTT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCTATGGGAAAGGTTCTaGATGATACTTGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLWERF*MILGLR
Trigger: CCTGAGCCCAAGTATCATTCAGAACCTTTCCCATAG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTCTTCAACTCCTATTaGTTTCCGTTGGTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLFNSY*FPLVAV
Trigger: GACTGCAACCAACGGAAATCAATAGGAGTTGAAGAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGAGTTGGAAAGGGATTaGACCAAACCATTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSELERD*TKPLEH
Trigger: GTGCTCTAATGGTTTGGTTCAATCCCTTTCCAACTC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTCTACTGAGGTTGACTaGGAAAAGATTATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVESTEVD*EKIMFR
Trigger: TCTGAACATAATCTTTTCTCAGTCAACCTCAGTAGA...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGCTGCATAGTGATTaGGTTTCTTCTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWLHSD*VSSLSV
Trigger: CACAGAGAGAGAAGAAACGCAATCACTATGCAGCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTTGGACATTCTGTGGCTaGATAGTGATTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVWTFCG*IVIAFL
Trigger: AAGAAACGCAATCACTATGCAGCCACAGAATGTCCA...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGGACATTCTGTGGCTaGATAGTGATTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVWTFCG*IVIAFL
Trigger: AAGAAACGCAATCACTATGCAGCCACAGAATGTCCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAAGGCGGAAGTCATATaGAATGGAGGAATCGGAGAT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSKAEVI*NGGIGD
Trigger: ATCTCCGATTCCTCCATTGCATATGACTTCCGCCTT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTCGTTATTTATATGGTaGACAAGCTGCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSLFIW*TSCSWV
Trigger: CACCCAAGAGCAGCTTGTGCACCATATAAATAACGA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCGAGTAGGCCTTTGTaGAACCTTCAAAAGTGCATT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSSRPL*NLQKCI
Trigger: AATGCACTTTTGAAGGTTGCACAAAGGCCTACTCGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTGTTGCAACCTTCGTaGTCACAGACGTATGGTTTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLLQPS*SQTYGF
Trigger: GAAACCATACGTCTGTGAGCACGAAGGTTGCAACAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTGAGAAAGCCTTGTTaGAACCTTCGTGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLRKPC*NLRAHR
Trigger: TCTGTGAGCACGAAGGTTGCAACAAGGCTTTCTCAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGCAGCCTGGGATTTTaGACACATATGGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVCSLGF*THMVSH
Trigger: ATGAGAAACCATATGTGTGCAAAATCCCAGGCTGCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAAGCCTATTGCATAACTaGAAGGAATTTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSLLHN*KEFAFF
Trigger: GAAGAAAGCAAATTCCTTGCAGTTATGCAATAGGCT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTTTCCTAAAGCCTATTaGATAACTGCAAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNFPKAY*ITARNL
Trigger: CAAATTCCTTGCAGTTATGCAATAGGCTTTAGGAAA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAATATTCTGTCATCTATaGTACAGTGCACCCACAAAA +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRIFCHL*YSAPTK
Trigger: TTTTGTGGGTGCACTGTAGCATAGATGACAGAATAT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCTAATTCTACCCAATTaGTTCAATCTACCATCTATC +
Preference number: 4 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLILPN*FNLPSI
Trigger: GATAGATGGTAGATTGAAGCAATTGGGTAGAATTAG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTTATGTGTATCAAATaGACGTGGGGAGTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVFMCIK*TWGVAA
Trigger: TGCAGCTACTCCCCACGTGCATTTGATACACATAAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCCATGTACTCTTTGTaGACACACAGTATGACTTTT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSMYSL*THSMTF
Trigger: AAAAGTCATACTGTGTGTGCACAAAGAGTACATGGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAACACTCAGGCCCCATaGTTTGAAAACAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSNTQAP*FENKSW
Trigger: CCAACTCTTGTTTTCAAAGCATGGGGCCTGAGTGTT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCTCAAGATATGAGATaGCTAGCCTACAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSQDMR*LAYRDP
Trigger: GGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTCACATCTGTTCGAGTaGAGCACTTCACTATGGAAT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSHLFE*STSLWN
Trigger: ATTCCATAGTGAAGTGCTCCACTCGAACAGATGTGA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGTGGCAGGGACCCATaGATCTCTTTCTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCGRDP*ISFLIN
Trigger: ATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGAAGTCATATGCAATaGAGGAATCGGAGATGGATC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGSHMQ*RNRRWI
Trigger: GATCCATCTCCGATTCCTCCATTGCATATGACTTCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTATTAATGTAGGGATGTaGAGGGCTGAAGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFINVGM*RAEGRL
Trigger: GAGTCTCCCTTCAGCCCTCCACATCCCTACATTAAT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTCTGTTTTGGTGTTTaGCGCGATCAGAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSFCFGV*RDQRHL
Trigger: CAAATGCCTCTGATCGCGCCAAACACCAAAACAGAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGATTTTGCACACATATaGTTTCTCATTGGAATGCGT +
Preference number: 4 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRDFAHI*FLIGMR
Trigger: ACGCATTCCAATGAGAAACCATATGTGTGCAAAATC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTACGCTTAGTGCAGCCTaGGATTTTGCACACATATGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFTLSAA*DFAHIW
Trigger: CCATATGTGTGCAAAATCCCAGGCTGCACTAAGCGT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAGCTGCAGGTGTTGTTaGACTGTGTGCCATTTCCTA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSCRCC*TVCHFL
Trigger: TAGGAAATGGCACACAGTCCAACAACACCTGCAGCT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCAATGTGTGAGGAGTTaGGAGGGGTTAACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVQCVRS*EGLTFS
Trigger: TGAAAAAGTTAACCCCTCCCAACTCCTCACACATTG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTGCTATCCATAGCATaGAGATATTCCATGTGGATG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVLSIA*RYSMWM
Trigger: CATCCACATGGAATATCTTCATGCTATGGATAGCAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAAATGGTTGAGTCCATaGTTGGGGTTTCATCGATGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFKWLSP*LGFHRW
Trigger: CCATCGATGAAACCCCAATCATGGACTCAACCATTT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTCTTGCTTTTTCAACTaGAAAGTGGTAGAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVSCFFN*KVVEPL
Trigger: TAGAGGCTCTACCACTTTTCAGTTGAAAAAGCAAGA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGGATCTCTGATTCTGTaGCAACATTATGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNGSLIL*QHYALF
Trigger: AAACAAGGCATAATGTTGTCACAGAATCAGAGATCC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGAGTTGGAAAGGGATTaGACCAAACCATTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFELERD*TKPLEH
Trigger: GTGCTCTAATGGTTTGGTTCAATCCCTTTCCAACTC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGCCACAACAGATCACTaGAATTCTGGAGGAGTATAC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFATTDH*NSGGVY
Trigger: GTATACTCCTCCAGAATTTCAGTGATCTGTTGTGGC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTCCTAACAAAATTAGCTaGTTAGGAGCTCACAGTACA +
Preference number: 4 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVPNKIS*LGAHST
Trigger: TGTACTGTGAGCTCCTAATCAGCTAATTTTGTTAGG...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGGCTGCATAGTGATTaGGTTTCTTCTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFWLHSD*VSSLSV
Trigger: CACAGAGAGAGAAGAAACGCAATCACTATGCAGCCA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGACATTCTGTGGCTaGATAGTGATTGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWTFCG*IVIAFL
Trigger: AAGAAACGCAATCACTATGCAGCCACAGAATGTCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCGTTATTTATATGGTaGACAAGCTGCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSLFIW*TSCSWV
Trigger: CACCCAAGAGCAGCTTGTGCACCATATAAATAACGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCGAGTAGGCCTTTGTaGAACCTTCAAAAGTGCATT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSSRPL*NLQKCI
Trigger: AATGCACTTTTGAAGGTTGCACAAAGGCCTACTCGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTTGTTGCAACCTTCGTaGTCACAGACGTATGGTTTC +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLLQPS*SQTYGF
Trigger: GAAACCATACGTCTGTGAGCACGAAGGTTGCAACAA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGCAGCCTGGGATTTTaGACACATATGGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCSLGF*THMVSH
Trigger: ATGAGAAACCATATGTGTGCAAAATCCCAGGCTGCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACTAATTCTACCCAATTaGTTCAATCTACCATCTATC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLILPN*FNLPSI
Trigger: GATAGATGGTAGATTGAAGCAATTGGGTAGAATTAG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTAACACTCAGGCCCCATaGTTTGAAAACAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFNTQAP*FENKSW
Trigger: CCAACTCTTGTTTTCAAAGCATGGGGCCTGAGTGTT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCTGAGAAATGGAGGTTaGATCCGAGAATACTACTGG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLRNGG*IREYYW
Trigger: CCAGTAGTATTCTCGGATGCAACCTCCATTTCTCAG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATTTATTTTACATGTCTaGAGGATACACAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKFILHV*RIHKGN
Trigger: GTTACCCTTGTGTATCCTGCAGACATGTAAAATAAA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGTGGCAGGGACCCATaGATCTCTTTCTTGATCAAT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFCGRDP*ISFLIN
Trigger: ATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGTCGTTATTTATATaGTGCACAAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWSLFI*CTSCSW
Trigger: CCAAGAGCAGCTTGTGCACCATATAAATAACGACCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTTCTGTTTTGGTGTTTaGCGCGATCAGAGGCATTTG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFFCFGV*RDQRHL
Trigger: CAAATGCCTCTGATCGCGCCAAACACCAAAACAGAA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTACCCTGCTTGGTTCTaGGAATTTAAATACTGCACC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSYPAWF*EFKYCT
Trigger: GGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGCTCGTACCCTGCTTaGTTCTGGGAATTTAAATAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCSYPA*FWEFKY
Trigger: GTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTATGGTAACTGAGAAATaGAGGTTGCATCCGAGAATA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVMVTEK*RLHPRI
Trigger: TATTCTCGGATGCAACCTCCATTTCTCAGTTACCAT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AAATATAAGAATAGCAGGTTGACTCATACAAATCAGTGTGCCCAGATAGGCAGTGTACCAGGGATGCTCTaGAATTTATTTTCAACACTC +
Preference number: 4 (lower is better)
Translates to: KYKNSRLTHTNQCAQIGSVPGML*NLFSTL
Trigger: GAGTGTTGAAAATAAATTCCAGAGCATCCCTGGTAC...ACTGCCTATCTGGGCACACTGATTTGTATGAGTCAACCTGCTATTCTTATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGTGCTATCCATAGCATaGAGATATTCCATGTGGATG +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFVLSIA*RYSMWM
Trigger: CATCCACATGGAATATCTTCATGCTATGGATAGCAC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCACATCTCAGTTAGGTaGGATGAGATTGCTAAAATA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVHISVR*DEIAKI
Trigger: TATTTTAGCAATCTCATCTCACCTAACTGAGATGTG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGCAAATGTGATAACTaGGAATCGACCATACAGACA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGKCDN*ESTIQT
Trigger: TGTCTGTATGGTCGATTCTCAGTTATCACATTTGCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTATACAGCAGGTAGCCTaGGGTGTTAATATTTTAACA +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVIQQVA*GVNILT
Trigger: TGTTAAAATATTAACACCTCAGGCTACCTGCTGTAT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCTTGCTTTTTCAACTaGAAAGTGGTAGAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSCFFN*KVVEPL
Trigger: TAGAGGCTCTACCACTTTTCAGTTGAAAAAGCAAGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTTCAAAACAACACATaGAACCAGGATACAAGACAG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVQNNT*NQDTRQ
Trigger: CTGTCTTGTATCCTGGTTTCATGTGTTGTTTTGAAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTACTCCATGCTTGAACTaGAATGCCTCTCAACACTTT +
Preference number: 4 (lower is better)
Translates to: PEAKYIGSIYSDRITIKITPCLN*NASQHF
Trigger: AAAGTGTTGAGAGGCATTTCAGTTCAAGCATGGAGT...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTCGAGTAGGCCTTTGTaGAACCTTCAAAAGTGCATT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSSRPL*NLQKCI
Trigger: AATGCACTTTTGAAGGTTGCACAAAGGCCTACTCGA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTCATCTATGCTACAGTaGACCCACAAAAGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: IHKGNLSEENILLSVQNNSSMLQ*THKSFL
Trigger: TAAGAAACTTTTGTGGGTGCACTGTAGCATAGATGA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTTCTAATGTTCTGGACTaGAGTTACCTTCCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PEAKYIGSIYSDRITIKISNVLD*SYLPKE
Trigger: CTCCTTTGGAAGGTAACTGCAGTCCAGAACATTAGA...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CCA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTTCACATCTGTTCGAGTaGAGCACTTCACTATGGAAT +
Preference number: 4 (lower is better)
Translates to: PEAKYIGSIYSDRITIKISHLFE*STSLWN
Trigger: ATTCCATAGTGAAGTGCTCCACTCGAACAGATGTGA...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CCA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTAGATTTGGAGATTTGTaGAAAAGTGAGACTGGATCT +
Preference number: 4 (lower is better)
Translates to: LTIVELINVTDTAACGVVRFGDL*KSETGS
Trigger: AGATCCAGTCTCACTTTTCCACAAATCTCCAAATCT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
3UTR CAA 72 bp TTTATTTTACATGTCTGCAGGATACACAAGGGTAACTaGTCAGAAGAGAACATCCTCCTATCAGTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: FILHVCRIHKGN*SEENILLSVQN
Trigger: GTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTATCCTGCAGACATGTAAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCACATCTCAGTTAGGTaGGATGAGATTGCTAAAATA +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSHISVR*DEIAKI
Trigger: TATTTTAGCAATCTCATCTCACCTAACTGAGATGTG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGATCTCTGATTCTGTaGCAACATTATGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGSLIL*QHYALF
Trigger: AAACAAGGCATAATGTTGTCACAGAATCAGAGATCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGCCTATTGCATAACTaGAAGGAATTTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSLLHN*KEFAFF
Trigger: GAAGAAAGCAAATTCCTTGCAGTTATGCAATAGGCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTAGCAATATTCCTGCCTaGTCTTATAAATTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVSNIPA*SYKFSN
Trigger: GTTGCTAAATTTATAAGAGCAGGCAGGAATATTGCT...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCATATGGTTTCTCATTaGAATGCGTTCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSHMVSH*NAFCFG
Trigger: ACCAAAACAGAACGCATTCCAATGAGAAACCATATG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGATTTTGCACACATATaGTTTCTCATTGGAATGCGT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSDFAHI*FLIGMR
Trigger: ACGCATTCCAATGAGAAACCATATGTGTGCAAAATC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGAACTGAATTGGAGATaGGGGGAACATCAATATTCT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFELNWR*GEHQYS
Trigger: AGAATATTGATGTTCCCCCCATCTCCAATTCAGTTC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGATTTGGAGATTTGTaGAAAAGTGAGACTGGATCT +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRFGDL*KSETGS
Trigger: AGATCCAGTCTCACTTTTCCACAAATCTCCAAATCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR TCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTATACAGCAGGTAGCCTaGGGTGTTAATATTTTAACA +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFIQQVA*GVNILT
Trigger: TGTTAAAATATTAACACCTCAGGCTACCTGCTGTAT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTTCCTAAAGCCTATTaGATAACTGCAAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSFPKAY*ITARNL
Trigger: CAAATTCCTTGCAGTTATGCAATAGGCTTTAGGAAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTCCATGTACTCTTTGTaGACACACAGTATGACTTTT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFSMYSL*THSMTF
Trigger: AAAAGTCATACTGTGTGTGCACAAAGAGTACATGGA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTTATTTTACATGTCTaGAGGATACACAAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSFILHV*RIHKGN
Trigger: GTTACCCTTGTGTATCCTGCAGACATGTAAAATAAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CCA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCATATGGTTTCTCATTaGAATGCGTTCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFHMVSH*NAFCFG
Trigger: ACCAAAACAGAACGCATTCCAATGAGAAACCATATG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR GCA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTTGTTTGTACCAGGGATaGTCTGGAATTTATTTTCAA +
Preference number: 4 (lower is better)
Translates to: PEAKYIGSIYSDRITIKICLYQG*SGIYFQ
Trigger: TTGAAAATAAATTCCAGAGCATCCCTGGTACAAACA...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS CCA 90 bp CACGAGGCAGGGCCAGGCCCTCGGAGCCTGTCCGCACCGGGTCGCTaGCCCTCCTCACGCCGTGGCCCGGCGCATCGTGCGGCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: HEAGPGPRSLSAPGR*PSSRRGPAHRAAAG
Trigger: ACCTGCAGCCGCACGATGCGCCGGGCCACGGCGTGAGGAGGGCCAGCGACCCGGTGCGGACAGGCTCCGAGGGCCTGGCCCTGCCTCGTG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp GCGGCTGCAGGTGGCGCCGCCCGTAGCCGTGGGCTCCCCCGTCGCTaGACCTCCTCGGGGCATGAACTGGAGGCAGGGCCACGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: AAAGGAARSRGLPRR*TSSGHELEAGPRQA
Trigger: AGCCTGGCGTGGCCCTGCCTCCAGTTCATGCCCCGAGGAGGTGCAGCGACGGGGGAGCCCACGGCTACGGGCGGCGCCACCTGCAGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CCCTCGGGGCAGGGCTGCTCGAGGGCATGGAACTGCTGGCCAGCGTaGCTGTCTGGCAGCCCGGGCGCGTCAAAGTCACCGGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: PSGQGCSRAWNCWPA*LSGSPGASKSPGPW
Trigger: CCACGGGCCCGGTGACTTTGACGCGCCCGGGCTGCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp GCGTGGCTGTCTGGCAGCCCGGGCGCGTCAAAGTCACCGGGCCCGTaGGGCACTTTGCTGTCGTCCGGGAGGGCGCTGGGGAAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: AWLSGSPGASKSPGP*GTLLSSGRALGKCC
Trigger: GCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTTTGACGCGCCCGGGCTGCCAGACAGCCACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp CTGGCAGCCCGGGCGCGTCAAAGTCACCGGGCCCGTGGGGCACTTTaGTGTCGTCCGGGAGGGCGCTGGGGAAGTGCTGCTCGTACCCTG +
Preference number: 5 (lower is better)
Translates to: LAARARQSHRARGAL*CRPGGRWGSAARTL
Trigger: CAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTTTGACGCGCCCGGGCTGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp CAGGCCCGCTCCTCAAGGGGTTCTGCGGGTGGACGACCATGCCGTTaGAGAACCCAAAGGCGCGAGTCTGCGGCACAGCGGGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: QARSSRGSAGGRPCR*RTQRRESAAQRAAA
Trigger: GGCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAGCGGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp GGCAGGTCGGTTTTGCTGCCCTCGGGGCAGGGCTGCTCGAGGGCATaGAACTGCTGGCCAGCGTGGCTGTCTGGCAGCCCGGGCGCGTCA +
Preference number: 5 (lower is better)
Translates to: GRSVLLPSGQGCSRA*NCWPAWLSGSPGAS
Trigger: TGACGCGCCCGGGCTGCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGGCAGCAAAACCGACCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp CCCCAGCAGGCCCGCTCCTCAAGGGGTTCTGCGGGTGGACGACCATaGCGTTGCAGAACCCAAAGGCGCGAGTCTGCGGCACAGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PQQARSSRGSAGGRP*RCRTQRRESAAQRA
Trigger: GGCCCGCTGTGCCGCAGACTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAGCGGGCCTGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp GGGCTCCCTGAGTCGGTCGGCCAGGCGACCTGGACTGTGAATGGCTaGCGGAATCTCTCGGGGGTGGCGGCCGAGGATGGATGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GLPESVGQATWTVNG*RNLSGVAAEDGCPL
Trigger: GAGGGGACATCCATCCTCGGCCGCCACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGACCGACTCAGGGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CCTGCTGCTCACCAAGGGCTCCCTGAGTCGGTCGGCCAGGCGACCTaGACTGTGAATGGCTGCCGGAATCTCTCGGGGGTGGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: PAAHQGLPESVGQAT*TVNGCRNLSGVAAE
Trigger: CTCGGCCGCCACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGACCGACTCAGGGAGCCCTTGGTGAGCAGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp GTTTTGCTGCCCTCGGGGCAGGGCTGCTCGAGGGCATGGAACTGCTaGCCAGCGTGGCTGTCTGGCAGCCCGGGCGCGTCAAAGTCACCG +
Preference number: 5 (lower is better)
Translates to: VLLPSGQGCSRAWNC*PAWLSGSPGASKSP
Trigger: CGGTGACTTTGACGCGCCCGGGCTGCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGGCAGCAAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp CCTGGCGCCTGCTGCCCCCAAAGCTGGCACATGGCTGGTAGCCCCTaGCAACTGCCAAGCTTGACGGCTGGCTGCCCATGCCGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: PGACCPQSWHMAGSP*QLPSLTAGCPCREP
Trigger: GGGCTCACGGCATGGGCAGCCAGCCGTCAAGCTTGGCAGTTGTCAGGGGCTACCAGCCATGTGCCAGCTTTGGGGGCAGCAGGCGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp TGCGGGTGGACGACCATGCCGTTGCAGAACCCAAAGGCGCGAGTCTaGGGCACAGCGGGCCGCGGCCCACACTTGAGCTTGGAGGAGGAC +
Preference number: 5 (lower is better)
Translates to: CGWTTMPLQNPKARV*GTAGRGPHLSLEED
Trigger: GTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp CTCACCAAGGGCTCCCTGAGTCGGTCGGCCAGGCGACCTGGACTGTaGATGGCTGCCGGAATCTCTCGGGGGTGGCGGCCGAGGATGGAT +
Preference number: 5 (lower is better)
Translates to: LTKGSLSRSARRPGL*MAAGISRGWRPRMD
Trigger: ATCCATCCTCGGCCGCCACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGACCGACTCAGGGAGCCCTTGGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp CCCAAAGCTGGCACATGGCTGGTAGCCCCTGACAACTGCCAAGCTTaGCGGCTGGCTGCCCATGCCGTGAGCCCCTGGCAGGCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: PKAGTWLVAPDNCQA*RLAAHAVSPWQAAL
Trigger: GAGAGCTGCCTGCCAGGGGCTCACGGCATGGGCAGCCAGCCGTCAAGCTTGGCAGTTGTCAGGGGCTACCAGCCATGTGCCAGCTTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp TTGGAGGAGGACAGGTCGGCGCTTCCGGAGCTGACTTCGTTCCACTaGATGGGCAGGTCGGTTTTGCTGCCCTCGGGGCAGGGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: LEEDRSALPELTSFH*MGRSVLLPSGQGCS
Trigger: CGAGCAGCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCATTCAGTGGAACGAAGTCAGCTCCGGAAGCGCCGACCTGTCCTCCTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp ATCCCGGCACCACAGGCACCGTCGAGTGCACCAGGGGCCACTGGCTaGCTGTTGAGACAGTTCCCATACTGCGGGGCCTTACAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: IPAPQAPSSAPGATG*LLRQFPYCGALQGC
Trigger: ACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGTGGTGCCGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp GAGGAGGGTGGTAGTGGGGCTCCATGTAACCATTCCTGGGGTCCATaGCAAACACCGTCCCGCGGTACGGCACAGAGGGCTCCGCCACGT +
Preference number: 5 (lower is better)
Translates to: EEGGSGAPCNHSWGP*QTPSRGTAQRAPPR
Trigger: ACGTGGCGGAGCCCTCTGTGCCGTACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATGGTTACATGGAGCCCCACTACCACCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp TTGAATCCCGGCACCACAGGCACCGTCGAGTGCACCAGGGGCCACTaGCTGCCTGTTGAGACAGTTCCCATACTGCGGGGCCTTACAGGG +
Preference number: 5 (lower is better)
Translates to: LNPGTTGTVECTRGH*LPVETVPILRGLTG
Trigger: CCCTGTAAGGCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGTGGTGCCGGGATTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGCCCGTGGGGCACTTaGCTGTCGTCCGGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGPWGT*LSSGRA
Trigger: CGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp CACCACAGGCACCGTCGAGTGCACCAGGGGCCACTGGCTGCCTGTTaGGACAGTTCCCATACTGCGGGGCCTTACAGGGCTGTTCATGGA +
Preference number: 5 (lower is better)
Translates to: HHRHRRVHQGPLAAC*DSSHTAGPYRAVHG
Trigger: TCCATGAACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CTGCCAGCTGACTCATTTGGCGCTACCGGCAGGCCGAAATTCAGCTaGCCCCCGCTCCCTTGCATGGGGGTGCTCTTCAGCTTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LPADSFGATGRPKFS*PPLPCMGVLFSFEA
Trigger: AGCCTCAAAGCTGAAGAGCACCCCCATGCAAGGGAGCGGGGGCCAGCTGAATTTCGGCCTGCCGGTAGCGCCAAATGAGTCAGCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp ACAGCAGATGGTAGTGGGGCTCCATGTAACCATTCCTGGGGTCCATaGCAAACACCGTCCCGCGGTACGGCACAGAGGGCTCCGCCACGT +
Preference number: 5 (lower is better)
Translates to: TADGSGAPCNHSWGP*QTPSRGTAQRAPPR
Trigger: ACGTGGCGGAGCCCTCTGTGCCGTACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATGGTTACATGGAGCCCCACTACCATCTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642432.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGCCCGTGGGGCACTTaGCTGTCGTCCGGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGPWGT*LSSGRA
Trigger: CGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGCCCACACTTGAGCTaGGAGGAGGACAGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGPHLS*EEDRSA
Trigger: CGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp TTTGAGGTAGTGTTGCTGAGGTCCTGCTGCTCACCAAGGGCTCCCTaGGTCGGTCGGCCAGGCGACCTGGACTGTGAATGGCTGCCGGAA +
Preference number: 5 (lower is better)
Translates to: FEVVLLRSCCSPRAP*VGRPGDLDCEWLPE
Trigger: TTCCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGACCGACTCAGGGAGCCCTTGGTGAGCAGCAGGACCTCAGCAACACTACCTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp AGCCCCTGGCAGGCAGCTCTCTGGCCCTTGGTAGATGTTGATGTGTaGGGTAGCACTAATCTGCCCAAGCATCTGCTGACCGGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: SPWQAALWPLVDVDV*GSTNLPKHLLTGAA
Trigger: GGCCGCCCCGGTCAGCAGATGCTTGGGCAGATTAGTGCTACCTCACACATCAACATCTACCAAGGGCCAGAGAGCTGCCTGCCAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp GGCCCGTGGGGCACTTTGCTGTCGTCCGGGAGGGCGCTGGGGAAGTaGTGCTCGTACCCTGCTTGGTTCTGGGAATTTAAATACTGCACC +
Preference number: 5 (lower is better)
Translates to: GPWGTLLSSGRALGK*CSYPAWFWEFKYCT
Trigger: GGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp ACTGCGGGGCCTTACAGGGCTGTTCATGGAAGGCGTTTCCACTGGTaGCACTTCCGGGGCTGTTGTGGAGCATCAAGTGCTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: TAGPYRAVHGRRFHW*HFRGCCGASSALGH
Trigger: GTGGCCCAGAGCACTTGATGCTCCACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAAGGCCCCGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp GCTGGTGAGCCAGGTACCCCTGTCCCACTGGGTCCTGGTTCTGCATaGCATTCACCATGCTGCCAGCTGACTCATTTGGCGCTACCGGCA +
Preference number: 5 (lower is better)
Translates to: AGEPGTPVPLGPGSA*HSPCCQLTHLALPA
Trigger: TGCCGGTAGCGCCAAATGAGTCAGCTGGCAGCATGGTGAATGGCATGCAGAACCAGGACCCAGTGGGACAGGGGTACCTGGCTCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp CTGTGGCTGAGTCGTTTGTGCAGCAGCAGGGATGGACAGCGCGGATaGATCCAATCCTCCTGGTCCAGCCTCTGGCCTGGGCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: LWLSRLCSSRDGQRG*IQSSWSSLWPGPPN
Trigger: ATTTGGAGGCCCAGGCCAGAGGCTGGACCAGGAGGATTGGATGCATCCGCGCTGTCCATCCCTGCTGCTGCACAAACGACTCAGCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437480.1
CDS CCA 90 bp AGTCACCGGGCCCGTGGGGCACTTTGCTGTCGTCCGGGAGGGCGCTaGGGAAGTGCTGCTCGTACCCTGCTTGGTTCTGGGAATTTAAAT +
Preference number: 5 (lower is better)
Translates to: SHRARGALCCRPGGR*GSAARTLLGSGNLN
Trigger: ATTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCCCGGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CATGAGCACTGTACCCAAGGCCAGAATCTACCCGGCAGTCTGCACTaGGGAGATGAGAAGTTGGGGCAGGATGACCAGCGGCGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: HEHCTQGQNLPGSLH*GDEKLGQDDQRRRE
Trigger: CTCCCTCCGCCGCTGGTCATCCTGCCCCAACTTCTCATCTCCCCAGTGCAGACTGCCGGGTAGATTCTGGCCTTGGGTACAGTGCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGCTCAGCCCACGGGTaGCTGAGATCATGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGSAHG*LRSWRA
Trigger: CGCTCTCCATGATCTCAGCAACCCGTGGGCTGAGCC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGGCCGCGGCCCACACTaGAGCTTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIGRGPH*SLEEDR
Trigger: CCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp CCGTGGGGCACTTTGCTGTCGTCCGGGAGGGCGCTGGGGAAGTGCTaGTCGTACCCTGCTTGGTTCTGGGAATTTAAATACTGCACCACG +
Preference number: 5 (lower is better)
Translates to: PWGTLLSSGRALGKC*SYPAWFWEFKYCTT
Trigger: CGTGGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp AGTGCACCAGGGGCCACTGGCTGCCTGTTGAGACAGTTCCCATACTaGGGGGCCTTACAGGGCTGTTCATGGAAGGCGTTTCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: SAPGATGCLLRQFPY*GALQGCSWKAFPLV
Trigger: CACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CCGCGGTACGGCACAGAGGGCTCCGCCACGTGTGGCAGGGACCCATaGATCTCTTTCTTGATCAATGAGGCCCTCTCGTCACTCGATGTT +
Preference number: 5 (lower is better)
Translates to: PRYGTEGSATCGRDP*ISFLINEALSSLDV
Trigger: AACATCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCCTCTGTGCCGTACCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp GGAAAAGATGAGGAGGGTGGTAGTGGGGCTCCATGTAACCATTCCTaGGGTCCATGGCAAACACCGTCCCGCGGTACGGCACAGAGGGCT +
Preference number: 5 (lower is better)
Translates to: GKDEEGGSGAPCNHS*GPWQTPSRGTAQRA
Trigger: AGCCCTCTGTGCCGTACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATGGTTACATGGAGCCCCACTACCACCCTCCTCATCTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp TGGAGGGCTGAAGGGAGACTCGGAAGCAGCAGTGGGGTTCCGGTGTaGGGAGATCCTAATGAAGGGCAGGTCCGGATACGTAGGGCTACT +
Preference number: 5 (lower is better)
Translates to: WRAEGRLGSSSGVPV*GDPNEGQVRIRRAT
Trigger: AGTAGCCCTACGTATCCGGACCTGCCCTTCATTAGGATCTCCCCACACCGGAACCCCACTGCTGCTTCCGAGTCTCCCTTCAGCCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CTCGTGGGCTTGTTCTGTGAGGACTCAGAAGGGCCGGAGCTGACCTaGACGGGGTTCAGAACCGTAGGGATCCCTGGAATAGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: LVGLFCEDSEGPELT*TGFRTVGIPGIGLC
Trigger: ACAGAGGCCTATTCCAGGGATCCCTACGGTTCTGAACCCCGTCCAGGTCAGCTCCGGCCCTTCTGAGTCCTCACAGAACAAGCCCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CATACTGCGGGGCCTTACAGGGCTGTTCATGGAAGGCGTTTCCACTaGTGCCACTTCCGGGGCTGTTGTGGAGCATCAAGTGCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: HTAGPYRAVHGRRFH*CHFRGCCGASSALG
Trigger: GCCCAGAGCACTTGATGCTCCACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAAGGCCCCGCAGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CATCCAAGAGGATCTGTGGCTGAGTCGTTTGTGCAGCAGCAGGGATaGACAGCGCGGATGCATCCAATCCTCCTGGTCCAGCCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: HPRGSVAESFVQQQG*TARMHPILLVQPLA
Trigger: GGCCAGAGGCTGGACCAGGAGGATTGGATGCATCCGCGCTGTCCATCCCTGCTGCTGCACAAACGACTCAGCCACAGATCCTCTTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437480.1
CDS CCA 90 bp GTGGGCTTGTTCTGCTGTGAGGACTCAGAAGGGCCGGAGCTGACCTaGACGGGGTTCAGAACCGTAGGGATCCCTGGAATAGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: VGLFCCEDSEGPELT*TGFRTVGIPGIGLC
Trigger: ACAGAGGCCTATTCCAGGGATCCCTACGGTTCTGAACCCCGTCCAGGTCAGCTCCGGCCCTTCTGAGTCCTCACAGCAGAACAAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGTGCACAAGCTGCTCTaGGGTGTCGAACTCCCTCGC +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWVHKLL*GVELPR
Trigger: GCGAGGGAGTTCGACACCCAAGAGCAGCTTGTGCAC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGTGGCAGCCGCGTACTaGGCCTTGAGGCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIVAAAY*ALRRYC
Trigger: GCAGTACCGCCTCAAGGCCAAGTACGCGGCTGCCAC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGCCGCGGCCCACACTaGAGCTTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGRGPH*SLEEDR
Trigger: CCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp GGAGCTTCCCCCTTTCAAGGTAGCCCATCCAAGAGGATCTGTGGCTaGGTCGTTTGTGCAGCAGCAGGGATGGACAGCGCGGATGCATCC +
Preference number: 5 (lower is better)
Translates to: GASPFQGSPSKRICG*VVCAAAGMDSADAS
Trigger: GGATGCATCCGCGCTGTCCATCCCTGCTGCTGCACAAACGACTCAGCCACAGATCCTCTTGGATGGGCTACCTTGAAAGGGGGAAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437480.1
CDS GCA 90 bp GGGCTGGGGAGGTCTTCATCGGGTTTGATCTTGGACCTCTTGTTGTaGATCGGGTCACCAGTGCTGCTCACTGCAGACTCACTCGTGGGC +
Preference number: 5 (lower is better)
Translates to: GLGRSSSGLILDLLL*IGSPVLLTADSLVG
Trigger: GCCCACGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGATGCACAACAAGAGGTCCAAGATCAAACCCGATGAAGACCTCCCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp ACCCCTGTCCCACTGGGTCCTGGTTCTGCATGCCATTCACCATGCTaGCAGCTGACTCATTTGGCGCTACCGGCAGGCCGAAATTCAGCT +
Preference number: 5 (lower is better)
Translates to: TPVPLGPGSACHSPC*QLTHLALPAGRNSA
Trigger: AGCTGAATTTCGGCCTGCCGGTAGCGCCAAATGAGTCAGCTGGCAGCATGGTGAATGGCATGCAGAACCAGGACCCAGTGGGACAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CTGTCGTCCGGGAGGGCGCTGGGGAAGTGCTGCTCGTACCCTGCTTaGTTCTGGGAATTTAAATACTGCACCACGTCGTCCGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LSSGRALGKCCSYPA*FWEFKYCTTSSGRK
Trigger: TTTCCTGCCGGACGACGTGGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGACGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CTGTTGAGACAGTTCCCATACTGCGGGGCCTTACAGGGCTGTTCATaGAAGGCGTTTCCACTGGTGCCACTTCCGGGGCTGTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LLRQFPYCGALQGCS*KAFPLVPLPGLLWS
Trigger: GCTCCACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCTCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp AAGGCCAGAATCTACCCGGCAGTCTGCACTGGGGAGATGAGAAGTTaGGGCAGGATGACCAGCGGCGGAGGGAGCCTCCTTAATCCTCTT +
Preference number: 5 (lower is better)
Translates to: KARIYPAVCTGEMRS*GRMTSGGGSLLNPL
Trigger: AAGAGGATTAAGGAGGCTCCCTCCGCCGCTGGTCATCCTGCCCCAACTTCTCATCTCCCCAGTGCAGACTGCCGGGTAGATTCTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGGGTTTCTGCTCTCTaGAGCAGTCCAGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRVSAL*SSPATC
Trigger: GCAGGTGGCTGGACTGCTCAAGAGAGCAGAAACCCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGACGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWTCSIH*VPAGFL
Trigger: GAGAAACCCGGCAGGGACCAAATGGATGGAGCACGT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGCCACTGGCTGCCTGTaGAGACAGTTCCCATACTGC +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWATGCL*RQFPYC
Trigger: GCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAAGGGCCTCTGCGCTTCCAGCAATCCACGCCCCTCAGCATAATCCTGGGACTCAGCAGGTGACCAGGTaGCAGAAGAAAGGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: ERASALPAIHAPQHNPGTQQVTR*QKKGPL
Trigger: CAGAGGCCCTTTCTTCTGCAACCTGGTCACCTGCTG...AGTCCCAGGATTATGCTGAGGGGCGTGGATTGCTGGAAGCGCAGAGGCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS TCA 90 bp CTCCATCGGTCAGAGGAAGCTCGAGCCCACTGTTGGAATAGTTGCTaGTGGGGGACTGTTGGCTGCTGCATGAAGACTGACCACCAGGGC +
Preference number: 5 (lower is better)
Translates to: LHRSEEARAHCWNSC*WGTVGCCMKTDHQG
Trigger: GCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCATCAGCAACTATTCCAACAGTGGGCTCGAGCTTCCTCTGACCGATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp TCCGGGAGGGCGCTGGGGAAGTGCTGCTCGTACCCTGCTTGGTTCTaGGAATTTAAATACTGCACCACGTCGTCCGGCAGGAAATCCTCA +
Preference number: 5 (lower is better)
Translates to: SGRALGKCCSYPAWF*EFKYCTTSSGRKSS
Trigger: TGAGGATTTCCTGCCGGACGACGTGGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGTTCCTCACTGACTTaGCTGAGCCCCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGSSLT*LSPWTF
Trigger: GAATGTCCAGGGGCTCAGCAAAGTCAGTGAGGAACC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGACTGACCACCAGGGCTaGGCTGAGATGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWTDHQG*AEMSLA
Trigger: AGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAGT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp CAGAGGGCTCCGCCACGTGTGGCAGGGACCCATGGATCTCTTTCTTaGTCAATGAGGCCCTCTCGTCACTCGATGTTGAAGGTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: QRAPPRVAGTHGSLS*SMRPSRHSMLKVPH
Trigger: GTGAGGAACCTTCAACATCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp CTTCTCTGCCTTGACGGTTTTCACCTGGAGGCATTCTTCCCGCTTTaGGGTAGTGTTGCTGAGGTCCTGCTGCTCACCAAGGGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LLCLDGFHLEAFFPL*GSVAEVLLLTKGSL
Trigger: CAGGGAGCCCTTGGTGAGCAGCAGGACCTCAGCAACACTACCTCAAAGCGGGAAGAATGCCTCCAGGTGAAAACCGTCAAGGCAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGACTCACTCGTGGGCTaGTTCTGTGAGGACTCAGAA +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWDSLVG*FCEDSE
Trigger: TTCTGAGTCCTCACAGAACAAGCCCACGAGTGAGTC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACGGGTTTCTCCTGGCTaGCAAAGCAAGGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIRVSPG*QSKGCG
Trigger: ACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp GTGCAAGGAGCGGATATAGTCCATGTAGGGATTAATGTAGGGATGTaGAGGGCTGAAGGGAGACTCGGAAGCAGCAGTGGGGTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: VQGADIVHVGINVGM*RAEGRLGSSSGVPV
Trigger: CACCGGAACCCCACTGCTGCTTCCGAGTCTCCCTTCAGCCCTCCACATCCCTACATTAATCCCTACATGGACTATATCCGCTCCTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGGGAATGCGTTCTGTTTaGGTGTTTGGCGCGATCAGA +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWGMRSV*VFGAIR
Trigger: TCTGATCGCGCCAAACACCAAAACAGAACGCATTCC...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACACGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHTCSIH*VPAGFL
Trigger: GAGAAACCCGGCAGGGACCAAATGGATGGAGCACGT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGTGGCAGCCGCGTACTaGGCCTTGAGGCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINVAAAY*ALRRYC
Trigger: GCAGTACCGCCTCAAGGCCAAGTACGCGGCTGCCAC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATCCTCATCGTTCAGGTaGGCATCAGCGTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTISSSFR*ASASMV
Trigger: GACCATGGACGCTGATGCCAACCTGAACGATGAGGA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGGCCCGTGGGGCACTTaGCTGTCGTCCGGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRGPWGT*LSSGRA
Trigger: CGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTTGGACGACCATGCCGTaGCAGAACCCAAAGGCGCGA +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILWTTMP*QNPKAR
Trigger: TCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCA...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCCACTGGCTGCCTGTaGAGACAGTTCCCATACTGC +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDATGCL*RQFPYC
Trigger: GCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGGGTGCTCTTCAGCTTaGAGGCTTGAATCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDGCSSA*RLESRH
Trigger: GTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACCC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp CCCACTGTTGGAATAGTTGCTGATGGGGGACTGTTGGCTGCTGCATaGAGACTGACCACCAGGGCTTGGCTGAGATGTCATTGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PTVGIVADGGLLAAA*RLTTRAWLRCHWLL
Trigger: GAGAAGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCATCAGCAACTATTCCAACAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp GGCTGCCCTTTCATCTCCATCTTGATACCATTCACCCTGCAGGTCTaGCTTGTGTCACTGAGCTGTCCTGACTGCAGAGCAAGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GCPFISILIPFTLQV*LVSLSCPDCRARLS
Trigger: GGACAGCCTTGCTCTGCAGTCAGGACAGCTCAGTGACACAAGTCAGACCTGCAGGGTGAATGGTATCAAGATGGAGATGAAAGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 90 bp CCTTCCAGGTCATGGCTGTCGAGGCTGTCCACTGTGCTTGTCACCTaGTTAGCACCTGGGGAAAGTAACTCAGAGTTTTTGGCGCTGGTC +
Preference number: 5 (lower is better)
Translates to: PSRSWLSRLSTVLVT*LAPGESNSEFLALV
Trigger: GACCAGCGCCAAAAACTCTGAGTTACTTTCCCCAGGTGCTAATCAGGTGACAAGCACAGTGGACAGCCTCGACAGCCATGACCTGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp CTGTCCCCTGCTGCTCTGTGTAAACGCGGCACCTTAAATGATTATTaGATGGACCACGGTTACTTTGTGTGTCTGTGCGCGCTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: LSPAALCKRGTLNDY*MDHGYFVCLCALPL
Trigger: CAGGGGCAGCGCGCACAGACACACAAAGTAACCGTGGTCCATGCAATAATCATTTAAGGTGCCGCGTTTACACAGAGCAGCAGGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAGGTCTTCATCGGGTTaGATCTTGGACCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWRSSSG*ILDLLL
Trigger: CAACAAGAGGTCCAAGATCAAACCCGATGAAGACCT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATATTGTCCCCTTCCTCCTaGACAAGGGTTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTILSPSS*TRVVPS
Trigger: CGAAGGAACAACCCTTGTCAAGGAGGAAGGGGACAA...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGACTTCAGGCTCCTGTTaGCTTTCATCTTTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWTSGSC*LSSLSP
Trigger: AGGGGACAAAGATGAAAGCAAACAGGAGCCTGAAGT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCGCTTTGAGGTAGTGTaGCTGAGGTCCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHRFEVV*LRSCCS
Trigger: TGAGCAGCAGGACCTCAGCAACACTACCTCAAAGCG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCGGGTTTCTCCTGGCTaGCAAAGCAAGGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRVSPG*QSKGCG
Trigger: ACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTCCTCATCGTTCAGGTaGGCATCAGCGTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHSSSFR*ASASMV
Trigger: GACCATGGACGCTGATGCCAACCTGAACGATGAGGA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGGCCGCGGCCCACACTaGAGCTTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVGRGPH*SLEEDR
Trigger: CCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTGCCAGCTGACTCATTaGGCGCTACCGGCAGGCCGA +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINCQLTH*ALPAGR
Trigger: TCGGCCTGCCGGTAGCGCCAAATGAGTCAGCTGGCA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACACCAGCTTTCGTGTCTaGCTGACTGAAGCCCACGGT +
Preference number: 5 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHTSFRV*LTEAHG
Trigger: ACCGTGGGCTTCAGTCAGCAAGACACGAAAGCTGGT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACGACTCACTCGTGGGCTaGTTCTGCTGTGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHDSLVG*FCCEDS
Trigger: TGAGTCCTCACAGCAGAACAAGCCCACGAGTGAGTC...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGCCGGGGTGGAAAAGTaGTCCCTCGGCTCCGCGCTC +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVAGVEK*SLGSAL
Trigger: GAGCGCGGAGCCGAGGGACAACTTTTCCACCCCGGC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677605.1
CDS GCA 90 bp TTTACGTGCTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTGGCTTaGAAAGCAAGGGCTGTGGTTGCAGTGGAAATGGTTGAGTCCATG +
Preference number: 5 (lower is better)
Translates to: FTCSIHLVPAGFLLA*KARAVVAVEMVESM
Trigger: CATGGACTCAACCATTTCCACTGCAACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp GGGAAGTGCTGCTCGTACCCTGCTTGGTTCTGGGAATTTAAATACTaGACCACGTCGTCCGGCAGGAAATCCTCATCGTTCAGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GKCCSYPAWFWEFKY*TTSSGRKSSSFRLA
Trigger: TGCCAACCTGAACGATGAGGATTTCCTGCCGGACGACGTGGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp TTATCATGGTCTGAAGGTCAAAGCTATGATCGGAGAGTGGTGATATaGACAGTGTACGTTTTCGGCTCGGCCTGGCTGACAGCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LSWSEGQSYDRRVVI*TVYVFGSAWLTAWG
Trigger: GCCCCAGGCTGTCAGCCAGGCCGAGCCGAAAACGTACACTGTCCATATCACCACTCTCCGATCATAGCTTTGACCTTCAGACCATGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACCATGGATCTCTTTCTaGATCAATGAGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIPWISF*INEALS
Trigger: CGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAGATGTCTGGCATCAATaGGTACAGGAGGATGGAAGG +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIDVWHQ*VQEDGR
Trigger: CCTTCCATCCTCCTGTACCAATTGATGCCAGACATC...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTTGTCCCCTTCCTCCTaGACAAGGGTTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDLSPSS*TRVVPS
Trigger: CGAAGGAACAACCCTTGTCAAGGAGGAAGGGGACAA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGTGTTTGCTTTCATCTTaGTCCCCTTCCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWCLLSS*SPSSLT
Trigger: TGTCAAGGAGGAAGGGGACAAAGATGAAAGCAAACA...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACGCGATCAGAGGCATTaGAGAAAGCCTTGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIRDQRH*RKPCCN
Trigger: GTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGCG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGTGGCAGCCGCGTACTaGGCCTTGAGGCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNVAAAY*ALRRYC
Trigger: GCAGTACCGCCTCAAGGCCAAGTACGCGGCTGCCAC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACTCATCCTCTCCATGTaGGGCAGGGGCGTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLILSM*GRGVGG
Trigger: GCCGCCGACGCCCCTGCCCAACATGGAGAGGATGAG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAATGGGCAGGTCGGTTTaGCTGCCCTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRMGRSV*LPSGQG
Trigger: GCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCAT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAATGGGCAGGTCGGTTTaGCTGCCCTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKMGRSV*LPSGQG
Trigger: GCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCAT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGCCCACACTTGAGCTaGGAGGAGGACAGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGPHLS*EEDRSA
Trigger: CGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGGCCGCGGCCCACACTaGAGCTTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRGRGPH*SLEEDR
Trigger: CCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTGGACGACCATGCCGTaGCAGAACCCAAAGGCGCGA +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINWTTMP*QNPKAR
Trigger: TCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGATAACTGCAAGGAATTaGCTTTCTTCCGCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWITARN*LSSARE
Trigger: CTCCCTAGCGGAAGAAAGCAAATTCCTTGCAGTTAT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACACGGGGAATGCAGGCTaGTCCGAGGAACGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNTGNAG*SEERLG
Trigger: GCCCAGGCGTTCCTCGGACAAGCCTGCATTCCCCGT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TGGACAGAAGGATGGAGGGCCATGGCGATGTCAACCACCAGCCAGCACACGAATTTCACTCTGATTGTGTaGGCTGTCTCGTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: WTEGWRAMAMSTTSQHTNFTLIV*AVSSWS
Trigger: TGACCATGACGAGACAGCCAACACAATCAGAGTGAA...ATTCGTGTGCTGGCTGGTGGTTGACATCGCCATGGCCCTCCATCCTTCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS GCA 90 bp ACGTTGCTGCATGAAGCAGGACTCGAACACGCACTTGTGGGCGCTTaGAGACAGACATCTATCCGATTTCTCATGGTAACCGAGGGAACA +
Preference number: 5 (lower is better)
Translates to: TLLHEAGLEHALVGA*RQTSIRFLMVTEGT
Trigger: TGTTCCCTCGGTTACCATGAGAAATCGGATAGATGTCTGTCTGCAAGCGCCCACAAGTGCGTGTTCGAGTCCTGCTTCATGCAGCAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 90 bp CTAGTTTTACGTGCTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTaGCTTGCAAAGCAAGGGCTGTGGTTGCAGTGGAAATGGTTGAGT +
Preference number: 5 (lower is better)
Translates to: LVLRAPSIWSLPGFS*LAKQGLWLQWKWLS
Trigger: ACTCAACCATTTCCACTGCAACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACGTAAAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGGCTCAGCCCACGGGTaGCTGAGATCATGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNGSAHG*LRSWRA
Trigger: CGCTCTCCATGATCTCAGCAACCCGTGGGCTGAGCC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCGGGTTTCTCCTGGCTaGCAAAGCAAGGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINRVSPG*QSKGCG
Trigger: ACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACCTGCTGTCCCTTCTGTaGAGCATGTTCAGCATAGTG +
Preference number: 5 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHLLSLL*SMFSIV
Trigger: CACTATGCTGAACATGCTCAACAGAAGGGACAGCAG...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCCCGTGGGGCACTTaGCTGTCGTCCGGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGPWGT*LSSGRA
Trigger: CGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGCCCACACTTGAGCTaGGAGGAGGACAGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGPHLS*EEDRSA
Trigger: CGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACCCACTTCCGGGGCTGTaGTGGAGCATCAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINPLPGL*WSIKCS
Trigger: AGAGCACTTGATGCTCCACAACAGCCCCGGAAGTGG...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGCCACTGGCTGCCTGTaGAGACAGTTCCCATACTGC +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINATGCL*RQFPYC
Trigger: GCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACCTTTCATCTCCATCTaGATACCATTCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIPFISI*IPFTLQ
Trigger: CTGCAGGGTGAATGGTATCAAGATGGAGATGAAAGG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACACTGAAGCCCACGGTTaGGTCATAGAACTGACCAGA +
Preference number: 5 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHTEAHG*VIELTR
Trigger: TCTGGTCAGTTCTATGACCAAACCGTGGGCTTCAGT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACTGGAAGTGTAACCCCTaGGTCACAAGCACACCAACT +
Preference number: 5 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHWKCNP*VTSTPT
Trigger: AGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCCA...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGCAGTGTCCCTCTGCTaGTCTCAGGAACATCTAGTT +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDAVSLC*SQEHLV
Trigger: AACTAGATGTTCCTGAGACAAGCAGAGGGACACTGC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTCAGGCCCCATGCTTaGAAAACAAGAGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTILRPHA*KTRVGK
Trigger: CTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGAG...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGATACACAAGGGTAACTaGTCAGAAGAGAACATCCTC +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWIHKGN*SEENIL
Trigger: GAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAACGGGGAATGCAGGCTaGTCCGAGGAACGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRTGNAG*SEERLG
Trigger: GCCCAGGCGTTCCTCGGACAAGCCTGCATTCCCCGT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCGACTCGAACACGCACTaGTGGGCGCTTGCAGACAGA +
Preference number: 5 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVDSNTH*WALADR
Trigger: TCTGTCTGCAAGCGCCCACAAGTGCGTGTTCGAGTC...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS TCA 90 bp ATGGCACTGCCATGTATTTGCACAGCGGCCGGCCCTCCATACCTTTaGCTAAAGGGTTCTTTGACTTGGAGACGCAGACAGTCCATCATT +
Preference number: 5 (lower is better)
Translates to: MALPCICTAAGPPYL*LKGSLTWRRRQSII
Trigger: AATGATGGACTGTCTGCGTCTCCAAGTCAAAGAACCCTTTAGTCAAAGGTATGGAGGGCCGGCCGCTGTGCAAATACATGGCAGTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCCATGGATCTCTTTCTaGATCAATGAGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILPWISF*INEALS
Trigger: CGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGATGTCTGGCATCAATaGGTACAGGAGGATGGAAGG +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILDVWHQ*VQEDGR
Trigger: CCTTCCATCCTCCTGTACCAATTGATGCCAGACATC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTCATCGGGTTTGATCTaGGACCTCTTGTTGTGCATC +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSSGLI*DLLLCI
Trigger: GATGCACAACAAGAGGTCCAAGATCAAACCCGATGA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGTGCACAAGCTGCTCTaGGGTGTCGAACTCCCTCGC +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVVHKLL*GVELPR
Trigger: GCGAGGGAGTTCGACACCCAAGAGCAGCTTGTGCAC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGTCTCGAGTAGGCCTTaGTGCAACCTTCAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILVSSRP*CNLQKC
Trigger: GCACTTTTGAAGGTTGCACAAAGGCCTACTCGAGAC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCGCGATCAGAGGCATTaGAGAAAGCCTTGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRDQRH*RKPCCN
Trigger: GTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGCG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGGAATGCGTTCTGTTTaGGTGTTTGGCGCGATCAGA +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILGMRSV*VFGAIR
Trigger: TCTGATCGCGCCAAACACCAAAACAGAACGCATTCC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACACTGACCACCAGGGCTaGGCTGAGATGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINTDHQG*AEMSLA
Trigger: AGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAGT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCTCATCCTCTCCATGTaGGGCAGGGGCGTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVLILSM*GRGVGG
Trigger: GCCGCCGACGCCCCTGCCCAACATGGAGAGGATGAG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTCCTCATCGTTCAGGTaGGCATCAGCGTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSSSFR*ASASMV
Trigger: GACCATGGACGCTGATGCCAACCTGAACGATGAGGA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTATGGGCAGGTCGGTTTaGCTGCCCTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVMGRSV*LPSGQG
Trigger: GCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCAT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACCAGGATACAAGACAGCCTCGACTCTGCTACCACCGTGCGCTCTCTGGCTGGAAATCCATGTACTCTTaGTGCACACACAGTATGACT +
Preference number: 5 (lower is better)
Translates to: NQDTRQPRLCYHRALSGWKSMYS*CTHSMT
Trigger: AGTCATACTGTGTGTGCACAAAGAGTACATGGATTT...CCAGCCAGAGAGCGCACGGTGGTAGCAGAGTCGAGGCTGTCTTGTATCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCTCAGGCCCCATGCTTaGAAAACAAGAGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDLRPHA*KTRVGK
Trigger: CTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGAG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp TTGACAGAAACACACTGTCCACCATGGCAACAGGCAGAAGTCTGCTaGAAAAATGTAAGCAAACAGCCCACTGCTCCAAGAGCATCTGCC +
Preference number: 5 (lower is better)
Translates to: LTETHCPPWQQAEVC*KNVSKQPTAPRASA
Trigger: GGCAGATGCTCTTGGAGCAGTGGGCTGTTTGCTTACATTTTTGCAGCAGACTTCTGCCTGTTGCCATGGTGGACAGTGTGTTTCTGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 90 bp TCGTCACTCGATGTTGAAGGTTCCTCACTGACTTTGCTGAGCCCCTaGACATTCTGTGGCTGCATAGTGATTGCGTTTCTTCTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SSLDVEGSSLTLLSP*TFCGCIVIAFLLSL
Trigger: CAGAGAGAGAAGAAACGCAATCACTATGCAGCCACAGAATGTCCAGGGGCTCAGCAAAGTCAGTGAGGAACCTTCAACATCGAGTGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp AGATGGATCGTAATGGTAACGGCCCTCATGATGTCTGGCATCAATTaGTACAGGAGGATGGAAGGCAGGGAAAAGATGAGGAGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: RWIVMVTALMMSGIN*YRRMEGREKMRRVV
Trigger: TACCACCCTCCTCATCTTTTCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTACGATCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp GAGGAATCGGAGATGGATCGTAATGGTAACGGCCCTCATGATGTCTaGCATCAATTGGTACAGGAGGATGGAAGGCAGGGAAAAGATGAG +
Preference number: 5 (lower is better)
Translates to: EESEMDRNGNGPHDV*HQLVQEDGRQGKDE
Trigger: CTCATCTTTTCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTACGATCCATCTCCGATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 90 bp CATTCACTTGTTTTAGCCTTTCTAGTTTTACGTGCTCCATCCATTTaGTCCCTGCCGGGTTTCTCCTGGCTTGCAAAGCAAGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: HSLVLAFLVLRAPSI*SLPGFSWLAKQGLW
Trigger: CCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACGTAAAACTAGAAAGGCTAAAACAAGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCTGCTACGGGAATTATaGAGAATCGTGACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILLLREL*RIVTKE
Trigger: CTCCTTGGTCACGATTCTCAATAATTCCCGTAGCAG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAGGTCTTCATCGGGTTaGATCTTGGACCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRSSSG*ILDLLL
Trigger: CAACAAGAGGTCCAAGATCAAACCCGATGAAGACCT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTACTTCAGGCTCCTGTTaGCTTTCATCTTTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILTSGSC*LSSLSP
Trigger: AGGGGACAAAGATGAAAGCAAACAGGAGCCTGAAGT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAGTGCACAAGCTGCTCTaGGGTGTCGAACTCCCTCGC +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRVHKLL*GVELPR
Trigger: GCGAGGGAGTTCGACACCCAAGAGCAGCTTGTGCAC...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTGCATTTGAGAAAGCCTaGTTGCAACCTTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILAFEKA*LQPSCS
Trigger: TGAGCACGAAGGTTGCAACAAGGCTTTCTCAAATGC...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACATTGGCTTCTCTGCCTaGACGGTTTTCACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINIGFSA*TVFTWR
Trigger: CCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAAT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCGGGTTTCTCCTGGCTaGCAAAGCAAGGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNRVSPG*QSKGCG
Trigger: ACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACACGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNTCSIH*VPAGFL
Trigger: GAGAAACCCGGCAGGGACCAAATGGATGGAGCACGT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGTGGCAGCCGCGTACTaGGCCTTGAGGCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNVAAAY*ALRRYC
Trigger: GCAGTACCGCCTCAAGGCCAAGTACGCGGCTGCCAC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTCATCCTCTCCATGTaGGGCAGGGGCGTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLILSM*GRGVGG
Trigger: GCCGCCGACGCCCCTGCCCAACATGGAGAGGATGAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATGGGCAGGTCGGTTTaGCTGCCCTCGGGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSMGRSV*LPSGQG
Trigger: GCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGGCCCACACTTGAGCTaGGAGGAGGACAGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNGPHLS*EEDRSA
Trigger: CGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCCGCGGCCCACACTaGAGCTTGGAGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGRGPH*SLEEDR
Trigger: CCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGCCACTGGCTGCCTGTaGAGACAGTTCCCATACTGC +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVATGCL*RQFPYC
Trigger: GCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCCTTTCATCTCCATCTaGATACCATTCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILPFISI*IPFTLQ
Trigger: CTGCAGGGTGAATGGTATCAAGATGGAGATGAAAGG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAAGAGTTGGAAAGGGATaGAACCAAACCATTAGAGCA +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTIRVGKG*NQTIRA
Trigger: TGCTCTAATGGTTTGGTTCAATCCCTTTCCAACTCT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTCCAATGTGTGAGGAGTaGGGAGGGGTTAACTTTTTC +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILPMCEE*GGVNFF
Trigger: GAAAAAGTTAACCCCTCCCAACTCCTCACACATTGG...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTACGGGGAATGCAGGCTaGTCCGAGGAACGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVTGNAG*SEERLG
Trigger: GCCCAGGCGTTCCTCGGACAAGCCTGCATTCCCCGT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACACGGGGAATGCAGGCTaGTCCGAGGAACGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNTGNAG*SEERLG
Trigger: GCCCAGGCGTTCCTCGGACAAGCCTGCATTCCCCGT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCCTCTGGCTAGCTACTTaGCGCCAACTTCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVLWLAT*RQLLLV
Trigger: CACCAAGAGAAGTTGGCGCAAAGTAGCTAGCCAGAG...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS TCA 90 bp AAGGGTTCTTTGACTTGGAGACGCAGACAGTCCATCATTTCAAACTaGAGTGGCAGCTGGAAAATGTGGAACAGCTGGCAAAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: KGSLTWRRRQSIISN*SGSWKMWNSWQRAG
Trigger: CCCAGCTCTTTGCCAGCTGTTCCACATTTTCCAGCTGCCACTTCAGTTTGAAATGATGGACTGTCTGCGTCTCCAAGTCAAAGAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS GCA 90 bp CTGCTGCAAAAATGTAAGCAAACAGCCCACTGCTCCAAGAGCATCTaGCAATGGACTTTAACAGCCAAACACAAGGCAACTGTTCCCGCT +
Preference number: 5 (lower is better)
Translates to: LLQKCKQTAHCSKSI*QWTLTAKHKATVPA
Trigger: AGCGGGAACAGTTGCCTTGTGTTTGGCTGTTAAAGTCCATTGGCAGATGCTCTTGGAGCAGTGGGCTGTTTGCTTACATTTTTGCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 90 bp AGGCTACGCCAGGCCAAATTATTGACAGAAACACACTGTCCACCATaGCAACAGGCAGAAGTCTGCTGCAAAAATGTAAGCAAACAGCCC +
Preference number: 5 (lower is better)
Translates to: RLRQAKLLTETHCPP*QQAEVCCKNVSKQP
Trigger: GGGCTGTTTGCTTACATTTTTGCAGCAGACTTCTGCCTGTTGCCATGGTGGACAGTGTGTTTCTGTCAATAATTTGGCCTGGCGTAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGGTTCCTCACTGACTTaGCTGAGCCCCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRGSSLT*LSPWTF
Trigger: GAATGTCCAGGGGCTCAGCAAAGTCAGTGAGGAACC...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGCTCAGCCCACGGGTaGCTGAGATCATGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVGSAHG*LRSWRA
Trigger: CGCTCTCCATGATCTCAGCAACCCGTGGGCTGAGCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACATCGTGACCAAGGAGTaGGGAGACGTCCTTATCATG +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINIVTKE*GDVLIM
Trigger: CATGATAAGGACGTCTCCCAACTCCTTGGTCACGAT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAAGGGTTTCTGCTCTCTaGAGCAGTCCAGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKRVSAL*SSPATC
Trigger: GCAGGTGGCTGGACTGCTCAAGAGAGCAGAAACCCT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAACATATACTGGGCTTaGAAGGGTTTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDNIYWA*KGFCSL
Trigger: AAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGTT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GGCTTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATAACATATGGTTTCTCATaGGAATGCGTTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: GLSEERLGQSHLNAMPTITYGFS*ECVLFW
Trigger: CCAAAACAGAACGCATTCCAATGAGAAACCATATGT...TATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTGGCAGCCGCGTACTaGGCCTTGAGGCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVAAAY*ALRRYC
Trigger: GCAGTACCGCCTCAAGGCCAAGTACGCGGCTGCCAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCCCACACTTGAGCTaGGAGGAGGACAGGTCGGCG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGPHLS*EEDRSA
Trigger: CGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGCCAGCTGACTCATTaGGCGCTACCGGCAGGCCGA +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNCQLTH*ALPAGR
Trigger: TCGGCCTGCCGGTAGCGCCAAATGAGTCAGCTGGCA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACACTGAAGCCCACGGTTaGGTCATAGAACTGACCAGA +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINTEAHG*VIELTR
Trigger: TCTGGTCAGTTCTATGACCAAACCGTGGGCTTCAGT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACCAGCCGCTTGTGGGGTaGTTTAAATACCTATATACT +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDQPLVG*FKYLYT
Trigger: AGTATATAGGTATTTAAACAACCCCACAAGCGGCTG...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACTGGAGATTTGGAGATTaGTGGAAAAGTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDWRFGD*WKSETG
Trigger: TCCAGTCTCACTTTTCCACAAATCTCCAAATCTCCA...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CCCCTGCTCCATTTGCTTTCTTTAGCGTCTCCTAGAACAAACACTGGTCCAGGTGACCAAAAATGCCTTTaGCTTTCTCGCTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: PLLHLLSLASPRTNTGPGDQKCL*LSRSFQ
Trigger: CTGGAAGGAGCGAGAAAGCAAAAGGCATTTTTGGTC...ACCTGGACCAGTGTTTGTTCTAGGAGACGCTAAAGAAAGCAAATGGAGCAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CAA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGCGCACTTGTGGGCGCTaGCAGACAGACATCTATCCG +
Preference number: 5 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVERTCGR*QTDIYP
Trigger: CGGATAGATGTCTGTCTGCAAGCGCCCACAAGTGCG...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAGTGCACGTCTGCATTaGAAAGTAAGCAAGAGAACA +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDSARLH*KVSKRT
Trigger: TGTTCTCTTGCTTACTTTCAAATGCAGACGTGCACT...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678429.1
CDS GCA 90 bp ACTGACTTTGCTGAGCCCCTGGACATTCTGTGGCTGCATAGTGATTaGGTTTCTTCTCTCTCTGTGATAAGTCTGTCCAGGACTTTCATC +
Preference number: 5 (lower is better)
Translates to: TDFAEPLDILWLHSD*VSSLSVISLSRTFI
Trigger: GATGAAAGTCCTGGACAGACTTATCACAGAGAGAGAAGAAACGCAATCACTATGCAGCCACAGAATGTCCAGGGGCTCAGCAAAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp CGCGGAAACATTCCATTCACTTGTTTTAGCCTTTCTAGTTTTACGTaGTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTGGCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: RGNIPFTCFSLSSFT*SIHLVPAGFLLACK
Trigger: TTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACGTAAAACTAGAAAGGCTAAAACAAGTGAATGGAATGTTTCCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp GCAACAGGCAGAAGTCTGCTGCAAAAATGTAAGCAAACAGCCCACTaGTCCAAGAGCATCTGCCAATGGACTTTAACAGCCAAACACAAG +
Preference number: 5 (lower is better)
Translates to: ATGRSLLQKCKQTAH*SKSICQWTLTAKHK
Trigger: CTTGTGTTTGGCTGTTAAAGTCCATTGGCAGATGCTCTTGGAGCAGTGGGCTGTTTGCTTACATTTTTGCAGCAGACTTCTGCCTGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGCTCAGCCCACGGGTaGCTGAGATCATGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGSAHG*LRSWRA
Trigger: CGCTCTCCATGATCTCAGCAACCCGTGGGCTGAGCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACTCATCGGGTTTGATCTaGGACCTCTTGTTGTGCATC +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINSSGLI*DLLLCI
Trigger: GATGCACAACAAGAGGTCCAAGATCAAACCCGATGA...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACACTTCAGGCTCCTGTTaGCTTTCATCTTTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINTSGSC*LSSLSP
Trigger: AGGGGACAAAGATGAAAGCAAACAGGAGCCTGAAGT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTGAGTGTCACCAACTGTCCGTCCCTTCTCTCTAACTGCAGTGCGAAACAGCACACATATGGTTTCTCATaGGAATGCGTTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: LSVTNCPSLLSNCSAKQHTYGFS*ECVLFW
Trigger: CCAAAACAGAACGCATTCCAATGAGAAACCATATGT...GTGCTGTTTCGCACTGCAGTTAGAGAGAAGGGACGGACAGTTGGTGACACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAATTGGCTTCTCTGCCTaGACGGTTTTCACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVIGFSA*TVFTWR
Trigger: CCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAAT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAACTGACCACCAGGGCTaGGCTGAGATGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKTDHQG*AEMSLA
Trigger: AGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAGT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATCCTCATCGTTCAGGTaGGCATCAGCGTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRSSSFR*ASASMV
Trigger: GACCATGGACGCTGATGCCAACCTGAACGATGAGGA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGGACGACCATGCCGTaGCAGAACCCAAAGGCGCGA +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVWTTMP*QNPKAR
Trigger: TCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGCCAGCTGACTCATTaGGCGCTACCGGCAGGCCGA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCQLTH*ALPAGR
Trigger: TCGGCCTGCCGGTAGCGCCAAATGAGTCAGCTGGCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAACCAGCTTTCGTGTCTaGCTGACTGAAGCCCACGGT +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKTSFRV*LTEAHG
Trigger: ACCGTGGGCTTCAGTCAGCAAGACACGAAAGCTGGT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ACACACAGCCTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACGATAAGACTGGAGATTaGGAGATTTGTGGAAAAGTG +
Preference number: 5 (lower is better)
Translates to: THSLGVLIGQHQLVPLIDDKTGD*EICGKV
Trigger: CACTTTTCCACAAATCTCCAAATCTCCAGTCTTATC...GTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAGGCTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTGTCCGAGGAACGCCTGGGCCAGTCACATCTGAACGCTATGCCTACAATACTTAGAGTTGGAAAGGGATaGAACCAAACCATTAGAGCA +
Preference number: 5 (lower is better)
Translates to: LSEERLGQSHLNAMPTILRVGKG*NQTIRA
Trigger: TGCTCTAATGGTTTGGTTCAATCCCTTTCCAACTCT...AAGTATTGTAGGCATAGCGTTCAGATGTGACTGGCCCAGGCGTTCCTCGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp ATCCATGCTCAAGTGGAAGTTAACAAATCCCTGCCCCCAGAGAGCTaGCCAAAGCATCACGTTTTAGAAACTGTCCCAGAATTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: IHAQVEVNKSLPPES*PKHHVLETVPEFPN
Trigger: GTTTGGAAATTCTGGGACAGTTTCTAAAACGTGATGCTTTGGGCAGCTCTCTGGGGGCAGGGATTTGTTAACTTCCACTTGAGCATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS GCA 90 bp TTATTGACAGAAACACACTGTCCACCATGGCAACAGGCAGAAGTCTaGTGCAAAAATGTAAGCAAACAGCCCACTGCTCCAAGAGCATCT +
Preference number: 5 (lower is better)
Translates to: LLTETHCPPWQQAEV*CKNVSKQPTAPRAS
Trigger: AGATGCTCTTGGAGCAGTGGGCTGTTTGCTTACATTTTTGCAGCAGACTTCTGCCTGTTGCCATGGTGGACAGTGTGTTTCTGTCAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 90 bp CAAAAATGTAAGCAAACAGCCCACTGCTCCAAGAGCATCTGCCAATaGACTTTAACAGCCAAACACAAGGCAACTGTTCCCGCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: QKCKQTAHCSKSICQ*TLTAKHKATVPASL
Trigger: TAGAGAAGCGGGAACAGTTGCCTTGTGTTTGGCTGTTAAAGTCCATTGGCAGATGCTCTTGGAGCAGTGGGCTGTTTGCTTACATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 90 bp TTCTTTGACTTGGAGACGCAGACAGTCCATCATTTCAAACTGAAGTaGCAGCTGGAAAATGTGGAACAGCTGGCAAAGAGCTGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: FFDLETQTVHHFKLK*QLENVEQLAKSWEK
Trigger: TTTCTCCCAGCTCTTTGCCAGCTGTTCCACATTTTCCAGCTGCCACTTCAGTTTGAAATGATGGACTGTCTGCGTCTCCAAGTCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS-3UTR CAA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGACCATGGATCTCTTTCTaGATCAATGAGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRPWISF*INEALS
Trigger: CGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGG...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGATGTCTGGCATCAATaGGTACAGGAGGATGGAAGG +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVDVWHQ*VQEDGR
Trigger: CCTTCCATCCTCCTGTACCAATTGATGCCAGACATC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGCTCAGCCCACGGGTaGCTGAGATCATGGAGAGCG +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGSAHG*LRSWRA
Trigger: CGCTCTCCATGATCTCAGCAACCCGTGGGCTGAGCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAATCGTGACCAAGGAGTaGGGAGACGTCCTTATCATG +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVIVTKE*GDVLIM
Trigger: CATGATAAGGACGTCTCCCAACTCCTTGGTCACGAT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAATCTTGGACCTCTTGTaGTGCATCGGGTCACCAGTG +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKILDLL*CIGSPV
Trigger: CACTGGTGACCCGATGCACAACAAGAGGTCCAAGAT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAATCTTGGACCTCTTGTaGTGCATCGGGTCACCAGTG +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRILDLL*CIGSPV
Trigger: CACTGGTGACCCGATGCACAACAAGAGGTCCAAGAT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTGCACAAGCTGCTCTaGGGTGTCGAACTCCCTCGC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVHKLL*GVELPR
Trigger: GCGAGGGAGTTCGACACCCAAGAGCAGCTTGTGCAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAGGGTTTCTGCTCTCTaGAGCAGTCCAGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNRVSAL*SSPATC
Trigger: GCAGGTGGCTGGACTGCTCAAGAGAGCAGAAACCCT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGTCTCGAGTAGGCCTTaGTGCAACCTTCAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVVSSRP*CNLQKC
Trigger: GCACTTTTGAAGGTTGCACAAAGGCCTACTCGAGAC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACGCGATCAGAGGCATTaGAGAAAGCCTTGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVRDQRH*RKPCCN
Trigger: GTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGCG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGGAATGCGTTCTGTTTaGGTGTTTGGCGCGATCAGA +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVGMRSV*VFGAIR
Trigger: TCTGATCGCGCCAAACACCAAAACAGAACGCATTCC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAATTGGCTTCTCTGCCTaGACGGTTTTCACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRIGFSA*TVFTWR
Trigger: CCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAAT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGACGACCATGCCGTaGCAGAACCCAAAGGCGCGA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWTTMP*QNPKAR
Trigger: TCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCCACTTCCGGGGCTGTaGTGGAGCATCAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNPLPGL*WSIKCS
Trigger: AGAGCACTTGATGCTCCACAACAGCCCCGGAAGTGG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCCACTTCCGGGGCTGTaGTGGAGCATCAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVPLPGL*WSIKCS
Trigger: AGAGCACTTGATGCTCCACAACAGCCCCGGAAGTGG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGGGTGCTCTTCAGCTTaGAGGCTTGAATCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVGCSSA*RLESRH
Trigger: GTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACCC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGGGTGCTCTTCAGCTTaGAGGCTTGAATCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNGCSSA*RLESRH
Trigger: GTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACCC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAACTGAAGCCCACGGTTaGGTCATAGAACTGACCAGA +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVTEAHG*VIELTR
Trigger: TCTGGTCAGTTCTATGACCAAACCGTGGGCTTCAGT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACGCAGTGTCCCTCTGCTaGTCTCAGGAACATCTAGTT +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNAVSLC*SQEHLV
Trigger: AACTAGATGTTCCTGAGACAAGCAGAGGGACACTGC...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACACTGAGAAATGGAGGTaGCATCCGAGAATACTACTG +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINTEKWR*HPRILL
Trigger: CAGTAGTATTCTCGGATGCAACCTCCATTTCTCAGT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACGCAAGAATCAAAACTTaGTGGCTCAAGAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINARIKT*WLKRKS
Trigger: GCTCTTCCTCTTGAGCCACAAAGTTTTGATTCTTGC...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 90 bp AGCCAAACACAAGGCAACTGTTCCCGCTTCTCTATGTTTAACAGCTaGAAGCTCGGGGGTCAAACCGAAACATGCAATTCACTAAAATCT +
Preference number: 5 (lower is better)
Translates to: SQTQGNCSRFSMFNS*KLGGQTETCNSLKS
Trigger: AGATTTTAGTGAATTGCATGTTTCGGTTTGACCCCCGAGCTTGCAGCTGTTAAACATAGAGAAGCGGGAACAGTTGCCTTGTGTTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGGTTCCTCACTGACTTaGCTGAGCCCCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVGSSLT*LSPWTF
Trigger: GAATGTCCAGGGGCTCAGCAAAGTCAGTGAGGAACC...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACTGCTACGGGAATTATaGAGAATCGTGACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVLLREL*RIVTKE
Trigger: CTCCTTGGTCACGATTCTCAATAATTCCCGTAGCAG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATTGATCTTGGACCTCTaGTTGTGCATCGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLILDL*LCIGSP
Trigger: TGGTGACCCGATGCACAACAAGAGGTCCAAGATCAA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATTGATCTTGGACCTCTaGTTGTGCATCGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLILDL*LCIGSP
Trigger: TGGTGACCCGATGCACAACAAGAGGTCCAAGATCAA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATCATCGGGTTTGATCTaGGACCTCTTGTTGTGCATC +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVSSGLI*DLLLCI
Trigger: GATGCACAACAAGAGGTCCAAGATCAAACCCGATGA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGGGTTTCTGCTCTCTaGAGCAGTCCAGCCACCTGC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRVSAL*SSPATC
Trigger: GCAGGTGGCTGGACTGCTCAAGAGAGCAGAAACCCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGCATTTGAGAAAGCCTaGTTGCAACCTTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVAFEKA*LQPSCS
Trigger: TGAGCACGAAGGTTGCAACAAGGCTTTCTCAAATGC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGGAATGCGTTCTGTTTaGGTGTTTGGCGCGATCAGA +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKGMRSV*VFGAIR
Trigger: TCTGATCGCGCCAAACACCAAAACAGAACGCATTCC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCGCTTTGAGGTAGTGTaGCTGAGGTCCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVRFEVV*LRSCCS
Trigger: TGAGCAGCAGGACCTCAGCAACACTACCTCAAAGCG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCGGGTTTCTCCTGGCTaGCAAAGCAAGGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRVSPG*QSKGCG
Trigger: ACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTCSIH*VPAGFL
Trigger: GAGAAACCCGGCAGGGACCAAATGGATGGAGCACGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACTGCTGTCCCTTCTGTaGAGCATGTTCAGCATAGTG +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLLSLL*SMFSIV
Trigger: CACTATGCTGAACATGCTCAACAGAAGGGACAGCAG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGACTGCTGTCCCTTCTGTaGAGCATGTTCAGCATAGTG +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRLLSLL*SMFSIV
Trigger: CACTATGCTGAACATGCTCAACAGAAGGGACAGCAG...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCACTTCCGGGGCTGTaGTGGAGCATCAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPLPGL*WSIKCS
Trigger: AGAGCACTTGATGCTCCACAACAGCCCCGGAAGTGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCCACTGGCTGCCTGTaGAGACAGTTCCCATACTGC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSATGCL*RQFPYC
Trigger: GCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGGTGCTCTTCAGCTTaGAGGCTTGAATCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGCSSA*RLESRH
Trigger: GTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCTCAGGCCCCATGCTTaGAAAACAAGAGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNLRPHA*KTRVGK
Trigger: CTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGAG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTACCAATGTGTGAGGAGTaGGGAGGGGTTAACTTTTTC +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVPMCEE*GGVNFF
Trigger: GAAAAAGTTAACCCCTCCCAACTCCTCACACATTGG...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGGAGAAGGTAATCACGTaGCTGCATGAAGCAGGACTC +
Preference number: 5 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVEEKVIT*LHEAGL
Trigger: GAGTCCTGCTTCATGCAGCAACGTGATTACCTTCTC...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGACGCCAGGCCAAATTATaGACAGAAACACACTGTCCA +
Preference number: 5 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRRQAKL*TETHCP
Trigger: TGGACAGTGTGTTTCTGTCAATAATTTGGCCTGGCG...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS GCA 90 bp TCTTGTTCAGTTGAGCCGAGTTGTTCAATAAAGTTTGAGAGTCAGTaGAGACAGGCTACGCCAGGCCAAATTATTGACAGAAACACACTG +
Preference number: 5 (lower is better)
Translates to: SCSVEPSCSIKFESQ*RQATPGQIIDRNTL
Trigger: CAGTGTGTTTCTGTCAATAATTTGGCCTGGCGTAGCCTGTCTGCACTGACTCTCAAACTTTATTGAACAACTCGGCTCAACTGAACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGTTCCTCACTGACTTaGCTGAGCCCCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGSSLT*LSPWTF
Trigger: GAATGTCCAGGGGCTCAGCAAAGTCAGTGAGGAACC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACTGCTACGGGAATTATaGAGAATCGTGACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKLLREL*RIVTKE
Trigger: CTCCTTGGTCACGATTCTCAATAATTCCCGTAGCAG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGACTCACTCGTGGGCTaGTTCTGTGAGGACTCAGAA +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNDSLVG*FCEDSE
Trigger: TTCTGAGTCCTCACAGAACAAGCCCACGAGTGAGTC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395925.8
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAATCATCGGGTTTGATCTaGGACCTCTTGTTGTGCATC +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKSSGLI*DLLLCI
Trigger: GATGCACAACAAGAGGTCCAAGATCAAACCCGATGA...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTTGTCCCCTTCCTCCTaGACAAGGGTTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVLSPSS*TRVVPS
Trigger: CGAAGGAACAACCCTTGTCAAGGAGGAAGGGGACAA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAACTTCAGGCTCCTGTTaGCTTTCATCTTTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRTSGSC*LSSLSP
Trigger: AGGGGACAAAGATGAAAGCAAACAGGAGCCTGAAGT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCGCTTTGAGGTAGTGTaGCTGAGGTCCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRFEVV*LRSCCS
Trigger: TGAGCAGCAGGACCTCAGCAACACTACCTCAAAGCG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACTGACCACCAGGGCTaGGCTGAGATGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTDHQG*AEMSLA
Trigger: AGCCAATGACATCTCAGCCAAGCCCTGGTGGTCAGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTACGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFTCSIH*VPAGFL
Trigger: GAGAAACCCGGCAGGGACCAAATGGATGGAGCACGT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCCTCATCGTTCAGGTaGGCATCAGCGTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSSSFR*ASASMV
Trigger: GACCATGGACGCTGATGCCAACCTGAACGATGAGGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCCACTTCCGGGGCTGTaGTGGAGCATCAAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFPLPGL*WSIKCS
Trigger: AGAGCACTTGATGCTCCACAACAGCCCCGGAAGTGG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGGTGCTCTTCAGCTTaGAGGCTTGAATCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGCSSA*RLESRH
Trigger: GTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACCC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACCTTTCATCTCCATCTaGATACCATTCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKPFISI*IPFTLQ
Trigger: CTGCAGGGTGAATGGTATCAAGATGGAGATGAAAGG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACCAGCTTTCGTGTCTaGCTGACTGAAGCCCACGGT +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTSFRV*LTEAHG
Trigger: ACCGTGGGCTTCAGTCAGCAAGACACGAAAGCTGGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACATAACTGCAAGGAATTaGCTTTCTTCCGCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNITARN*LSSARE
Trigger: CTCCCTAGCGGAAGAAAGCAAATTCCTTGCAGTTAT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACAAATCCATGTACTCTTaGTGCACACACAGTATGACT +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINKSMYS*CTHSMT
Trigger: AGTCATACTGTGTGTGCACAAAGAGTACATGGATTT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTTGGAGTGCTGATTGGGCAACACCAACTGGTCCCTCTCATTGACAAGATTAACATCAGTAGTTCTCTTTaGTTATGGGGCTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LGVLIGQHQLVPLIDKINISSSL*LWGCSK
Trigger: TTTGGAACAGCCCCATAACAAAAGAGAACTACTGAT...GTTAATCTTGTCAATGAGAGGGACCAGTTGGTGTTGCCCAATCAGCACTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACCAATGTGTGAGGAGTaGGGAGGGGTTAACTTTTTC +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKPMCEE*GGVNFF
Trigger: GAAAAAGTTAACCCCTCCCAACTCCTCACACATTGG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCTCTGGCTAGCTACTTaGCGCCAACTTCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVLWLAT*RQLLLV
Trigger: CACCAAGAGAAGTTGGCGCAAAGTAGCTAGCCAGAG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS-3UTR CAA 90 bp GTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGAGTCACCACAGTTACAGGTTaGCAGTTTGCTCAATTCTTA +
Preference number: 5 (lower is better)
Translates to: VHVKSQIVSTDGSVEFRVTTVTG*QFAQFL
Trigger: TAAGAATTGAGCAAACTGCAAACCTGTAACTGTGGT...GACTCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGGTTCCTCACTGACTTaGCTGAGCCCCTGGACATTC +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFGSSLT*LSPWTF
Trigger: GAATGTCCAGGGGCTCAGCAAAGTCAGTGAGGAACC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTCCATGGATCTCTTTCTaGATCAATGAGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVPWISF*INEALS
Trigger: CGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGG...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACATCGTGACCAAGGAGTaGGGAGACGTCCTTATCATG +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNIVTKE*GDVLIM
Trigger: CATGATAAGGACGTCTCCCAACTCCTTGGTCACGAT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGACTCACTCGTGGGCTaGTTCTGTGAGGACTCAGAA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSDSLVG*FCEDSE
Trigger: TTCTGAGTCCTCACAGAACAAGCCCACGAGTGAGTC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATCTTGGACCTCTTGTaGTGCATCGGGTCACCAGTG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSILDLL*CIGSPV
Trigger: CACTGGTGACCCGATGCACAACAAGAGGTCCAAGAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTGTCCCCTTCCTCCTaGACAAGGGTTGTTCCTTCG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLSPSS*TRVVPS
Trigger: CGAAGGAACAACCCTTGTCAAGGAGGAAGGGGACAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATGTTTGCTTTCATCTTaGTCCCCTTCCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRCLLSS*SPSSLT
Trigger: TGTCAAGGAGGAAGGGGACAAAGATGAAAGCAAACA...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACAACATATACTGGGCTTaGAAGGGTTTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNNIYWA*KGFCSL
Trigger: AAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGTT...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGTCTCGAGTAGGCCTTaGTGCAACCTTCAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVVSSRP*CNLQKC
Trigger: GCACTTTTGAAGGTTGCACAAAGGCCTACTCGAGAC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCGCGATCAGAGGCATTaGAGAAAGCCTTGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNRDQRH*RKPCCN
Trigger: GTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGCG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCGCTTTGAGGTAGTGTaGCTGAGGTCCTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFRFEVV*LRSCCS
Trigger: TGAGCAGCAGGACCTCAGCAACACTACCTCAAAGCG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATTGGCTTCTCTGCCTaGACGGTTTTCACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSIGFSA*TVFTWR
Trigger: CCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTACTGAAGCCCACGGTTaGGTCATAGAACTGACCAGA +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVTEAHG*VIELTR
Trigger: TCTGGTCAGTTCTATGACCAAACCGTGGGCTTCAGT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTACCAGCTTTCGTGTCTaGCTGACTGAAGCCCACGGT +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFTSFRV*LTEAHG
Trigger: ACCGTGGGCTTCAGTCAGCAAGACACGAAAGCTGGT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAATAACTGCAAGGAATTaGCTTTCTTCCGCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKITARN*LSSARE
Trigger: CTCCCTAGCGGAAGAAAGCAAATTCCTTGCAGTTAT...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGGAAGTGTAACCCCTaGGTCACAAGCACACCAACT +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVWKCNP*VTSTPT
Trigger: AGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACTGGAAGTGTAACCCCTaGGTCACAAGCACACCAACT +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNWKCNP*VTSTPT
Trigger: AGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCCA...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACCAGCCGCTTGTGGGGTaGTTTAAATACCTATATACT +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNQPLVG*FKYLYT
Trigger: AGTATATAGGTATTTAAACAACCCCACAAGCGGCTG...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GAAACAGCACTGAATGTTCATGAAGGTAGTGGGAGGAGAGGCAAATGTGATAACTGGAGATTTGGAGATTaGTGGAAAAGTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: ETALNVHEGSGRRGKCDNWRFGD*WKSETG
Trigger: TCCAGTCTCACTTTTCCACAAATCTCCAAATCTCCA...GTTATCACATTTGCCTCTCCTCCCACTACCTTCATGAACATTCAGTGCTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTATGGAGATTTGGAGATTaGTGGAAAAGTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVWRFGD*WKSETG
Trigger: TCCAGTCTCACTTTTCCACAAATCTCCAAATCTCCA...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAACTGAGAAATGGAGGTaGCATCCGAGAATACTACTG +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRTEKWR*HPRILL
Trigger: CAGTAGTATTCTCGGATGCAACCTCCATTTCTCAGT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTCTGGCTAGCTACTTaGCGCCAACTTCTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLWLAT*RQLLLV
Trigger: CACCAAGAGAAGTTGGCGCAAAGTAGCTAGCCAGAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479210.1
ENST00000677288.1
CDS-3UTR CAA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTCCCACTACTCCTCTCTaGTCCCAAGACCTAGAAGAT +
Preference number: 5 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVPTTPL*SQDLED
Trigger: ATCTTCTAGGTCTTGGGACAAGAGAGGAGTAGTGGG...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGAACTCCTGTACCAAGTaGCTTTTGACGGGCATTCAT +
Preference number: 5 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVENSCTK*LLTGIH
Trigger: ATGAATGCCCGTCAAAAGCAACTTGGTACAGGAGTT...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS TCA 90 bp AACCTGACAGTATACACACTCCACAATACAAACAGCTACGAGGCTTaGAAGCACTCTGTATACAGTGAAAGGGACACTTTCCAAGCAATA +
Preference number: 5 (lower is better)
Translates to: NLTVYTLHNTNSYEA*KHSVYSERDTFQAI
Trigger: TATTGCTTGGAAAGTGTCCCTTTCACTGTATACAGAGTGCTTTCAAGCCTCGTAGCTGTTTGTATTGTGGAGTGTGTATACTGTCAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS TCA 90 bp AACTCCTGTACCAAGTTGCTTTTGACGGGCATTCATATGAAAACCTaGCAGTATACACACTCCACAATACAAACAGCTACGAGGCTTGAA +
Preference number: 5 (lower is better)
Translates to: NSCTKLLLTGIHMKT*QYTHSTIQTATRLE
Trigger: TTCAAGCCTCGTAGCTGTTTGTATTGTGGAGTGTGTATACTGTCAGGTTTTCATATGAATGCCCGTCAAAAGCAACTTGGTACAGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCATGGATCTCTTTCTaGATCAATGAGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPWISF*INEALS
Trigger: CGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGATGTCTGGCATCAATaGGTACAGGAGGATGGAAGG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSDVWHQ*VQEDGR
Trigger: CCTTCCATCCTCCTGTACCAATTGATGCCAGACATC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATCGTGACCAAGGAGTaGGGAGACGTCCTTATCATG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSIVTKE*GDVLIM
Trigger: CATGATAAGGACGTCTCCCAACTCCTTGGTCACGAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCTGCTACGGGAATTATaGAGAATCGTGACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNLLREL*RIVTKE
Trigger: CTCCTTGGTCACGATTCTCAATAATTCCCGTAGCAG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTTGATCTTGGACCTCTaGTTGTGCATCGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLILDL*LCIGSP
Trigger: TGGTGACCCGATGCACAACAAGAGGTCCAAGATCAA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTCTCGAGTAGGCCTTaGTGCAACCTTCAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVSSRP*CNLQKC
Trigger: GCACTTTTGAAGGTTGCACAAAGGCCTACTCGAGAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTGCATTTGAGAAAGCCTaGTTGCAACCTTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVAFEKA*LQPSCS
Trigger: TGAGCACGAAGGTTGCAACAAGGCTTTCTCAAATGC...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCGCGATCAGAGGCATTaGAGAAAGCCTTGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRDQRH*RKPCCN
Trigger: GTTGCAACAAGGCTTTCTCAAATGCCTCTGATCGCG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGGAATGCGTTCTGTTTaGGTGTTTGGCGCGATCAGA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSGMRSV*VFGAIR
Trigger: TCTGATCGCGCCAAACACCAAAACAGAACGCATTCC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGCTGTCCCTTCTGTaGAGCATGTTCAGCATAGTG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLLSLL*SMFSIV
Trigger: CACTATGCTGAACATGCTCAACAGAAGGGACAGCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCCTTTCATCTCCATCTaGATACCATTCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVPFISI*IPFTLQ
Trigger: CTGCAGGGTGAATGGTATCAAGATGGAGATGAAAGG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACTGAAGCCCACGGTTaGGTCATAGAACTGACCAGA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTEAHG*VIELTR
Trigger: TCTGGTCAGTTCTATGACCAAACCGTGGGCTTCAGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGGAAGTGTAACCCCTaGGTCACAAGCACACCAACT +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSWKCNP*VTSTPT
Trigger: AGTTGGTGTGCTTGTGACCAAGGGGTTACACTTCCA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAACAGCCGCTTGTGGGGTaGTTTAAATACCTATATACT +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKQPLVG*FKYLYT
Trigger: AGTATATAGGTATTTAAACAACCCCACAAGCGGCTG...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAAAATCCATGTACTCTTaGTGCACACACAGTATGACT +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVKSMYS*CTHSMT
Trigger: AGTCATACTGTGTGTGCACAAAGAGTACATGGATTT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCAGTGTCCCTCTGCTaGTCTCAGGAACATCTAGTT +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAVSLC*SQEHLV
Trigger: AACTAGATGTTCCTGAGACAAGCAGAGGGACACTGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAATCAGTAGTTCTCTTTaGTTATGGGGCTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVISSSL*LWGCSK
Trigger: TTTGGAACAGCCCCATAACAAAAGAGAACTACTGAT...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATCACTTGCAGTAAATCCAATTCCAGGGGTCAATGGGACAGAATACAGCAGGTAGATAAGACTGGAGATTaGGAGATTTGTGGAAAAGTG +
Preference number: 5 (lower is better)
Translates to: ITCSKSNSRGQWDRIQQVDKTGD*EICGKV
Trigger: CACTTTTCCACAAATCTCCAAATCTCCAGTCTTATC...TACCTGCTGTATTCTGTCCCATTGACCCCTGGAATTGGATTTACTGCAAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTCTCAGGCCCCATGCTTaGAAAACAAGAGTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVLRPHA*KTRVGK
Trigger: CTTTCCAACTCTTGTTTTCAAAGCATGGGGCCTGAG...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCCATGGATCTCTTTCTaGATCAATGAGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFPWISF*INEALS
Trigger: CGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCTGCTACGGGAATTATaGAGAATCGTGACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSLLREL*RIVTKE
Trigger: CTCCTTGGTCACGATTCTCAATAATTCCCGTAGCAG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTTGATCTTGGACCTCTaGTTGTGCATCGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLILDL*LCIGSP
Trigger: TGGTGACCCGATGCACAACAAGAGGTCCAAGATCAA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTCATCGGGTTTGATCTaGGACCTCTTGTTGTGCATC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSSSGLI*DLLLCI
Trigger: GATGCACAACAAGAGGTCCAAGATCAAACCCGATGA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGGTCTTCATCGGGTTaGATCTTGGACCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRSSSG*ILDLLL
Trigger: CAACAAGAGGTCCAAGATCAAACCCGATGAAGACCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACTTCAGGCTCCTGTTaGCTTTCATCTTTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTSGSC*LSSLSP
Trigger: AGGGGACAAAGATGAAAGCAAACAGGAGCCTGAAGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGTCTCGAGTAGGCCTTaGTGCAACCTTCAAAAGTGC +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFVSSRP*CNLQKC
Trigger: GCACTTTTGAAGGTTGCACAAAGGCCTACTCGAGAC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGCATTTGAGAAAGCCTaGTTGCAACCTTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSAFEKA*LQPSCS
Trigger: TGAGCACGAAGGTTGCAACAAGGCTTTCTCAAATGC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTGTTCTGTTTTGGTGTTaGGCGCGATCAGAGGCATTT +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSVLFWC*ARSEAF
Trigger: AAATGCCTCTGATCGCGCCAAACACCAAAACAGAAC...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTCTGCTGTCCCTTCTGTaGAGCATGTTCAGCATAGTG +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFLLSLL*SMFSIV
Trigger: CACTATGCTGAACATGCTCAACAGAAGGGACAGCAG...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTCCTTTCATCTCCATCTaGATACCATTCACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSPFISI*IPFTLQ
Trigger: CTGCAGGGTGAATGGTATCAAGATGGAGATGAAAGG...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACATAACTGCAAGGAATTaGCTTTCTTCCGCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNITARN*LSSARE
Trigger: CTCCCTAGCGGAAGAAAGCAAATTCCTTGCAGTTAT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGAAAATCCATGTACTCTTaGTGCACACACAGTATGACT +
Preference number: 5 (lower is better)
Translates to: SRYEMPSLQRSQKDVPKRKSMYS*CTHSMT
Trigger: AGTCATACTGTGTGTGCACAAAGAGTACATGGATTT...TCTTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp TCTCAAGATATGAGATGCCTAGCCTACAGAGATCCCAAAAGGATGTCCCAAAAAGATAAGACTGGAGATTaGGAGATTTGTGGAAAAGTG +
Preference number: 5 (lower is better)
Translates to: SQDMRCLAYRDPKRMSQKDKTGD*EICGKV
Trigger: CACTTTTCCACAAATCTCCAAATCTCCAGTCTTATC...TTTTTGGGACATCCTTTTGGGATCTCTGTAGGCTAGGCATCTCATATCTTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACACTGAGAAATGGAGGTaGCATCCGAGAATACTACTG +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNTEKWR*HPRILL
Trigger: CAGTAGTATTCTCGGATGCAACCTCCATTTCTCAGT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACGCAAGAATCAAAACTTaGTGGCTCAAGAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNARIKT*WLKRKS
Trigger: GCTCTTCCTCTTGAGCCACAAAGTTTTGATTCTTGC...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTAAGTGGCCAGGCTGCTaGGAAGTATATGCCCTTAGA +
Preference number: 5 (lower is better)
Translates to: PEAKYIGSIYSDRITIKIKWPGC*EVYALR
Trigger: TCTAAGGGCATATACTTCCAAGCAGCCTGGCCACTT...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CAA 90 bp AATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTTCAGACTCTTAGCAAATGACTaGCAGAACAGAAAAGACAAT +
Preference number: 5 (lower is better)
Translates to: NVHVKSQIVSTDGSVEFRLLAND*QNRKDN
Trigger: ATTGTCTTTTCTGTTCTGCAAGTCATTTGCTAAGAG...TCTGAACTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642432.1
ENST00000643264.1
CDS-3UTR CAA 90 bp TTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGAGTGTACCAAGTTGCTTTaGACGGGCATTCATATGAAA +
Preference number: 5 (lower is better)
Translates to: FLNVHVKSQIVSTDGSVECTKLL*TGIHMK
Trigger: TTTCATATGAATGCCCGTCAAAAGCAACTTGGTACA...CTCAACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTTGTTTGCTTTCATCTTaGTCCCCTTCCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSCLLSS*SPSSLT
Trigger: TGTCAAGGAGGAAGGGGACAAAGATGAAAGCAAACA...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAACATATACTGGGCTTaGAAGGGTTTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNNIYWA*KGFCSL
Trigger: AAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGTT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATAACTGCAAGGAATTaGCTTTCTTCCGCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSITARN*LSSARE
Trigger: CTCCCTAGCGGAAGAAAGCAAATTCCTTGCAGTTAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACCAGCCGCTTGTGGGGTaGTTTAAATACCTATATACT +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNQPLVG*FKYLYT
Trigger: AGTATATAGGTATTTAAACAACCCCACAAGCGGCTG...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTTGGAGATTTGGAGATTaGTGGAAAAGTGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVWRFGD*WKSETG
Trigger: TCCAGTCTCACTTTTCCACAAATCTCCAAATCTCCA...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp ATACACAAGGGTAACTTGTCAGAAGAGAACATCCTCCTATCAGTTCAAAACAACAGAGTTGGAAAGGGATaGAACCAAACCATTAGAGCA +
Preference number: 5 (lower is better)
Translates to: IHKGNLSEENILLSVQNNRVGKG*NQTIRA
Trigger: TGCTCTAATGGTTTGGTTCAATCCCTTTCCAACTCT...GTTGTTTTGAACTGATAGGAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTGTAGACTACTTAAAGTaGGGGTTGGAGGAGACTGCT +
Preference number: 5 (lower is better)
Translates to: PEAKYIGSIYSDRITIKIVDYLK*GLEETA
Trigger: AGCAGTCTCCTCCAACCCCAACTTTAAGTAGTCTAC...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTTGTTTGCTTTCATCTTaGTCCCCTTCCTCCTTGACA +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFCLLSS*SPSSLT
Trigger: TGTCAAGGAGGAAGGGGACAAAGATGAAAGCAAACA...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAACATATACTGGGCTTaGAAGGGTTTCTGCTCTCTT +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSNIYWA*KGFCSL
Trigger: AAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGTT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTACATATGGTTTCTCATaGGAATGCGTTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVTYGFS*ECVLFW
Trigger: CCAAAACAGAACGCATTCCAATGAGAAACCATATGT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CTCACTATAGTGGAATTAATAAATGTTACTGATACAGCCGCTTGTGGGGTTGTTATCAGTAGTTCTCTTTaGTTATGGGGCTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LTIVELINVTDTAACGVVISSSL*LWGCSK
Trigger: TTTGGAACAGCCCCATAACAAAAGAGAACTACTGAT...AACAACCCCACAAGCGGCTGTATCAGTAACATTTATTAATTCCACTATAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTAGAGTTGGAAAGGGATaGAACCAAACCATTAGAGCA +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSRVGKG*NQTIRA
Trigger: TGCTCTAATGGTTTGGTTCAATCCCTTTCCAACTCT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTGCAAGAATCAAAACTTaGTGGCTCAAGAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFARIKT*WLKRKS
Trigger: GCTCTTCCTCTTGAGCCACAAAGTTTTGATTCTTGC...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTATACACAAGGGTAACTaGTCAGAAGAGAACATCCTC +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSIHKGN*SEENIL
Trigger: GAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp GTTTGGAAGTCAACGTGTAGGTTGAGTGCCAAAATAGAGATTACTACATTCCATAAGTCAACGTGTAGGTaGAGTGCCAAAATAGAGATT +
Preference number: 5 (lower is better)
Translates to: VWKSTCRLSAKIEITTFHKSTCR*SAKIEI
Trigger: AATCTCTATTTTGGCACTCAACCTACACGTTGACTT...ATGGAATGTAGTAATCTCTATTTTGGCACTCAACCTACACGTTGACTTCCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CAA 90 bp CCTGAAGCCAAGTACATAGGAAGCATTTATTCCGACAGAATTACCATAAAAATTACATATTCAGTCTGTTaGTACCAGGGATGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: PEAKYIGSIYSDRITIKITYSVC*YQGCSG
Trigger: TCCAGAGCATCCCTGGTACAAACAGACTGAATATGT...AATTTTTATGGTAATTCTGTCGGAATAAATGCTTCCTATGTACTTGGCTTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428534.2
CDS-3UTR CAA 90 bp TATTTTCTTAATGTGCATGTTAAGTCCCAAATAGTTTCCACGGATGGCAGCGTTGTCGATCTACTGAGGTaGACTGAGAAAAGATTATGT +
Preference number: 5 (lower is better)
Translates to: YFLNVHVKSQIVSTDGSVVDLLR*TEKRLC
Trigger: ACATAATCTTTTCTCAGTCAACCTCAGTAGATCGAC...AACGCTGCCATCCGTGGAAACTATTTGGGACTTAACATGCACATTAAGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS-3UTR CAA 90 bp AACAAAGTCAGTTTAATCTCTTCAACTCCTATTGATTTCCGTTGGTTGCAGTCTACATATGGTTTCTCATaGGAATGCGTTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: NKVSLISSTPIDFRWLQSTYGFS*ECVLFW
Trigger: CCAAAACAGAACGCATTCCAATGAGAAACCATATGT...AGACTGCAACCAACGGAAATCAATAGGAGTTGAAGAGATTAAACTGACTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS-3UTR CAA 90 bp CAAATACTAAAAATGGCTGAAGCAATTTATTCCCACTATGTGGGCTTTCTCTTTATACACAAGGGTAACTaGTCAGAAGAGAACATCCTC +
Preference number: 5 (lower is better)
Translates to: QILKMAEAIYSHYVGFLFIHKGN*SEENIL
Trigger: GAGGATGTTCTCTTCTGACAAGTTACCCTTGTGTAT...AAAGAGAAAGCCCACATAGTGGGAATAAATTGCTTCAGCCATTTTTAGTATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GGGCCAGGCCCTCGGAGCCTGTCCGCACCGGGTCGCTaGCCCTCCTCACGCCGTGGCCCGGCGCATCGTGCG +
Preference number: 6 (lower is better)
Translates to: GPGPRSLSAPGR*PSSRRGPAHRA
Trigger: CGCACGATGCGCCGGGCCACGGCGTGAGGAGGGCCAGCGACCCGGTGCGGACAGGCTCCGAGGGCCTGGCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp GGTGGCGCCGCCCGTAGCCGTGGGCTCCCCCGTCGCTaGACCTCCTCGGGGCATGAACTGGAGGCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: GGAARSRGLPRR*TSSGHELEAGP
Trigger: TGGCCCTGCCTCCAGTTCATGCCCCGAGGAGGTGCAGCGACGGGGGAGCCCACGGCTACGGGCGGCGCCACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GGCGTGAGGCTGAGCAGGCTGGGCAGGCCGTCGCTCTaGCTGGCTTCGCTGGAGCGGCGCGAGGCGTCGGTG +
Preference number: 6 (lower is better)
Translates to: GVRLSRLGRPSL*LASLERREASV
Trigger: CACCGACGCCTCGCGCCGCTCCAGCGAAGCCAGCCAGAGCGACGGCCTGCCCAGCCTGCTCAGCCTCACGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp GGCGTCGGCGGCGGCCCTCCTGTGGCAGCCGCGTACTaGGCCTTGAGGCGGTACTGCTGGGCGGGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: GVGGGPPVAAAY*ALRRYCWAGVR
Trigger: CCTCACGCCCGCCCAGCAGTACCGCCTCAAGGCCAAGTACGCGGCTGCCACAGGAGGGCCGCCGCCGACGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp CCGTGGGCTCCCCCGTCGCTGCACCTCCTCGGGGCATaGACTGGAGGCAGGGCCACGCCAGGCTCGAGGGCA +
Preference number: 6 (lower is better)
Translates to: PWAPPSLHLLGA*TGGRATPGSRA
Trigger: TGCCCTCGAGCCTGGCGTGGCCCTGCCTCCAGTTCATGCCCCGAGGAGGTGCAGCGACGGGGGAGCCCACGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GGCTCCCCCGTCGCTGCACCTCCTCGGGGCATGAACTaGAGGCAGGGCCACGCCAGGCTCGAGGGCATCCCC +
Preference number: 6 (lower is better)
Translates to: GSPVAAPPRGMN*RQGHARLEGIP
Trigger: GGGGATGCCCTCGAGCCTGGCGTGGCCCTGCCTCCAGTTCATGCCCCGAGGAGGTGCAGCGACGGGGGAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp TCTGGCAGCCCGGGCGCGTCAAAGTCACCGGGCCCGTaGGGCACTTTGCTGTCGTCCGGGAGGGCGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SGSPGASKSPGP*GTLLSSGRALG
Trigger: CCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTTTGACGCGCCCGGGCTGCCAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp CCCTCGGGGCAGGGCTGCTCGAGGGCATGGAACTGCTaGCCAGCGTGGCTGTCTGGCAGCCCGGGCGCGTCA +
Preference number: 6 (lower is better)
Translates to: PSGQGCSRAWNC*PAWLSGSPGAS
Trigger: TGACGCGCCCGGGCTGCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp CGCGAGTCTGCGGCACAGCGGGCCGCGGCCCACACTTaGGCTTGGAGGAGGACAGGTCGGCGCTTCCGGAGC +
Preference number: 6 (lower is better)
Translates to: RESAAQRAAAHT*AWRRTGRRFRS
Trigger: GCTCCGGAAGCGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCCCGCTGTGCCGCAGACTCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp CCGGGCGCGTCAAAGTCACCGGGCCCGTGGGGCACTTaGCTGTCGTCCGGGAGGGCGCTGGGGAAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: PGASKSPGPWGT*LSSGRALGKCC
Trigger: GCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTTTGACGCGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp GCGCGAGTCTGCGGCACAGCGGGCCGCGGCCCACACTaGAGCTTGGAGGAGGACAGGTCGGCGCTTCCGGAG +
Preference number: 6 (lower is better)
Translates to: ARVCGTAGRGPH*SLEEDRSALPE
Trigger: CTCCGGAAGCGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCCCGCTGTGCCGCAGACTCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp GCAGGCCCGCTCCTCAAGGGGTTCTGCGGGTGGACGACCATGCCGTaGCAGAACCCAAAGGCGCGAGTCTGCGGCACAGCGGGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: AGPLLKGFCGWTTMP*QNPKARVCGTAGRG
Trigger: GCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAGCGGGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp GGCTCCCTGAGTCGGTCGGCCAGGCGACCTGGACTGTaGATGGCTGCCGGAATCTCTCGGGGGTGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: GSLSRSARRPGL*MAAGISRGWRP
Trigger: CGGCCGCCACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGACCGACTCAGGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp CGGGCGCGTCAAAGTCACCGGGCCCGTGGGGCACTTTaGTGTCGTCCGGGAGGGCGCTGGGGAAGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: RARQSHRARGAL*CRPGGRWGSAA
Trigger: AGCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTTTGACGCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp CTCGAGGGCATGGAACTGCTGGCCAGCGTGGCTGTCTaGCAGCCCGGGCGCGTCAAAGTCACCGGGCCCGTG +
Preference number: 6 (lower is better)
Translates to: LEGMELLASVAV*QPGRVKVTGPV
Trigger: CACGGGCCCGGTGACTTTGACGCGCCCGGGCTGCCAGACAGCCACGCTGGCCAGCAGTTCCATGCCCTCGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp TCTGGCAGCCCGGGCGCGTCAAAGTCACCGGGCCCGTGGGGCACTTaGCTGTCGTCCGGGAGGGCGCTGGGGAAGTGCTGCTCGTACCCT +
Preference number: 6 (lower is better)
Translates to: SGSPGASKSPGPWGT*LSSGRALGKCCSYP
Trigger: AGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGCCCGGTGACTTTGACGCGCCCGGGCTGCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp GCCCCCGGGTGCTGCATGCTGTCGCCGAGGAGCTGGTaGGCCAGGTACCCCTGTCCCACTGGGTCCTGGTTC +
Preference number: 6 (lower is better)
Translates to: APGCCMLSPRSW*ARYPCPTGSWF
Trigger: GAACCAGGACCCAGTGGGACAGGGGTACCTGGCTCACCAGCTCCTCGGCGACAGCATGCAGCACCCGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp GTCTGCGGCACAGCGGGCCGCGGCCCACACTTGAGCTaGGAGGAGGACAGGTCGGCGCTTCCGGAGCTGACT +
Preference number: 6 (lower is better)
Translates to: VCGTAGRGPHLS*EEDRSALPELT
Trigger: AGTCAGCTCCGGAAGCGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCCCGCTGTGCCGCAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp AAGGCGCGAGTCTGCGGCACAGCGGGCCGCGGCCCACACTTGAGCTaGGAGGAGGACAGGTCGGCGCTTCCGGAGCTGACTTCGTTCCAC +
Preference number: 6 (lower is better)
Translates to: KARVCGTAGRGPHLS*EEDRSALPELTSFH
Trigger: GTGGAACGAAGTCAGCTCCGGAAGCGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp AACCCAAAGGCGCGAGTCTGCGGCACAGCGGGCCGCGGCCCACACTaGAGCTTGGAGGAGGACAGGTCGGCGCTTCCGGAGCTGACTTCG +
Preference number: 6 (lower is better)
Translates to: NPKARVCGTAGRGPH*SLEEDRSALPELTS
Trigger: CGAAGTCAGCTCCGGAAGCGCCGACCTGTCCTCCTCCAAGCTCAAGTGTGGGCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGGGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp GAGTCGGTCGGCCAGGCGACCTGGACTGTGAATGGCTaGCGGAATCTCTCGGGGGTGGCGGCCGAGGATGGA +
Preference number: 6 (lower is better)
Translates to: ESVGQATWTVNG*RNLSGVAAEDG
Trigger: TCCATCCTCGGCCGCCACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGACCGACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp ATGGGCAGGTCGGTTTTGCTGCCCTCGGGGCAGGGCTaGTCGAGGGCATGGAACTGCTGGCCAGCGTGGCTG +
Preference number: 6 (lower is better)
Translates to: MGRSVLLPSGQG*SRAWNCWPAWL
Trigger: CAGCCACGCTGGCCAGCAGTTCCATGCCCTCGAGCAGCCCTGCCCCGAGGGCAGCAAAACCGACCTGCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp ACTAATCTGCCCAAGCATCTGCTGACCGGGGCGGCCTaGCCCCGGGTGCTGCATGCTGTCGCCGAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: TNLPKHLLTGAA*PRVLHAVAEEL
Trigger: CAGCTCCTCGGCGACAGCATGCAGCACCCGGGGGCAGGCCGCCCCGGTCAGCAGATGCTTGGGCAGATTAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GCCCGTGGGGCACTTTGCTGTCGTCCGGGAGGGCGCTaGGGAAGTGCTGCTCGTACCCTGCTTGGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: ARGALCCRPGGR*GSAARTLLGSG
Trigger: CCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCCCCACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp CCCCCAGCAGGCCCGCTCCTCAAGGGGTTCTGCGGGTaGACGACCATGCCGTTGCAGAACCCAAAGGCGCGA +
Preference number: 6 (lower is better)
Translates to: PPAGPLLKGFCG*TTMPLQNPKAR
Trigger: TCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAGCGGGCCTGCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp GGCACATGGCTGGTAGCCCCTGACAACTGCCAAGCTTaGCGGCTGGCTGCCCATGCCGTGAGCCCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GTWLVAPDNCQA*RLAAHAVSPWQ
Trigger: CTGCCAGGGGCTCACGGCATGGGCAGCCAGCCGTCAAGCTTGGCAGTTGTCAGGGGCTACCAGCCATGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp ACGACCATGCCGTTGCAGAACCCAAAGGCGCGAGTCTaGGGCACAGCGGGCCGCGGCCCACACTTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: TTMPLQNPKARV*GTAGRGPHLSL
Trigger: CAAGCTCAAGTGTGGGCCGCGGCCCGCTGTGCCGCAGACTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp GCCCGCTCCTCAAGGGGTTCTGCGGGTGGACGACCATaGCGTTGCAGAACCCAAAGGCGCGAGTCTGCGGCA +
Preference number: 6 (lower is better)
Translates to: ARSSRGSAGGRP*RCRTQRRESAA
Trigger: TGCCGCAGACTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp CACCAAGGGCTCCCTGAGTCGGTCGGCCAGGCGACCTaGACTGTGAATGGCTGCCGGAATCTCTCGGGGGTG +
Preference number: 6 (lower is better)
Translates to: HQGLPESVGQAT*TVNGCRNLSGV
Trigger: CACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCGCCTGGCCGACCGACTCAGGGAGCCCTTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GGCACCACAGGCACCGTCGAGTGCACCAGGGGCCACTaGCTGCCTGTTGAGACAGTTCCCATACTGCGGGGC +
Preference number: 6 (lower is better)
Translates to: GTTGTVECTRGH*LPVETVPILRG
Trigger: GCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGTGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp TCCTCAAGGGGTTCTGCGGGTGGACGACCATGCCGTTaGAGAACCCAAAGGCGCGAGTCTGCGGCACAGCGG +
Preference number: 6 (lower is better)
Translates to: SSRGSAGGRPCR*RTQRRESAAQR
Trigger: CCGCTGTGCCGCAGACTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp CTCCTCAAGGGGTTCTGCGGGTGGACGACCATGCCGTaGCAGAACCCAAAGGCGCGAGTCTGCGGCACAGCG +
Preference number: 6 (lower is better)
Translates to: LLKGFCGWTTMP*QNPKARVCGTA
Trigger: CGCTGTGCCGCAGACTCGCGCCTTTGGGTTCTGCAACGGCATGGTCGTCCACCCGCAGAACCCCTTGAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp GCACCGTCGAGTGCACCAGGGGCCACTGGCTGCCTGTaGAGACAGTTCCCATACTGCGGGGCCTTACAGGGC +
Preference number: 6 (lower is better)
Translates to: APSSAPGATGCL*RQFPYCGALQG
Trigger: GCCCTGTAAGGCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCACTCGACGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp GGCCCCCGCTCCCTTGCATGGGGGTGCTCTTCAGCTTaGAGGCTTGAATCCCGGCACCACAGGCACCGTCGA +
Preference number: 6 (lower is better)
Translates to: GPRSLAWGCSSA*RLESRHHRHRR
Trigger: TCGACGGTGCCTGTGGTGCCGGGATTCAAGCCTCAAAGCTGAAGAGCACCCCCATGCAAGGGAGCGGGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp GTGTTGCTGAGGTCCTGCTGCTCACCAAGGGCTCCCTaGGTCGGTCGGCCAGGCGACCTGGACTGTGAATGG +
Preference number: 6 (lower is better)
Translates to: VLLRSCCSPRAP*VGRPGDLDCEW
Trigger: CCATTCACAGTCCAGGTCGCCTGGCCGACCGACTCAGGGAGCCCTTGGTGAGCAGCAGGACCTCAGCAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp GACAGGTCGGCGCTTCCGGAGCTGACTTCGTTCCACTaGATGGGCAGGTCGGTTTTGCTGCCCTCGGGGCAG +
Preference number: 6 (lower is better)
Translates to: DRSALPELTSFH*MGRSVLLPSGQ
Trigger: CTGCCCCGAGGGCAGCAAAACCGACCTGCCCATTCAGTGGAACGAAGTCAGCTCCGGAAGCGCCGACCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp CACCGTCGAGTGCACCAGGGGCCACTGGCTGCCTGTTaGGACAGTTCCCATACTGCGGGGCCTTACAGGGCT +
Preference number: 6 (lower is better)
Translates to: HRRVHQGPLAAC*DSSHTAGPYRA
Trigger: AGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCACTCGACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp TGCTGCCCCCAAAGCTGGCACATGGCTGGTAGCCCCTaGCAACTGCCAAGCTTGACGGCTGGCTGCCCATGC +
Preference number: 6 (lower is better)
Translates to: CCPQSWHMAGSP*QLPSLTAGCPC
Trigger: GCATGGGCAGCCAGCCGTCAAGCTTGGCAGTTGTCAGGGGCTACCAGCCATGTGCCAGCTTTGGGGGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp CCACAGGCACCGTCGAGTGCACCAGGGGCCACTGGCTaGCTGTTGAGACAGTTCCCATACTGCGGGGCCTTA +
Preference number: 6 (lower is better)
Translates to: PQAPSSAPGATG*LLRQFPYCGAL
Trigger: TAAGGCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp CCCCAGAGAGGTCGCTTCTGCCCGGGAGAAGCGTCATaGGCCCACCCAAGCTGCAGGTGTTGTTGGACTGTG +
Preference number: 6 (lower is better)
Translates to: PQRGRFCPGEAS*AHPSCRCCWTV
Trigger: CACAGTCCAACAACACCTGCAGCTTGGGTGGGCCCATGACGCTTCTCCCGGGCAGAAGCGACCTCTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GACTCATTTGGCGCTACCGGCAGGCCGAAATTCAGCTaGCCCCCGCTCCCTTGCATGGGGGTGCTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: DSFGATGRPKFS*PPLPCMGVLFS
Trigger: GCTGAAGAGCACCCCCATGCAAGGGAGCGGGGGCCAGCTGAATTTCGGCCTGCCGGTAGCGCCAAATGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp GCACCACAGGCACCGTCGAGTGCACCAGGGGCCACTGGCTGCCTGTaGAGACAGTTCCCATACTGCGGGGCCTTACAGGGCTGTTCATGG +
Preference number: 6 (lower is better)
Translates to: APQAPSSAPGATGCL*RQFPYCGALQGCSW
Trigger: CCATGAACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCCTGGTGCACTCGACGGTGCCTGTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp AGTCGTTTGTGCAGCAGCAGGGATGGACAGCGCGGATaGATCCAATCCTCCTGGTCCAGCCTCTGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: SRLCSSRDGQRG*IQSSWSSLWPG
Trigger: CCCAGGCCAGAGGCTGGACCAGGAGGATTGGATGCATCCGCGCTGTCCATCCCTGCTGCTGCACAAACGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437480.1
CDS CCA 72 bp GGTAGTGGGGCTCCATGTAACCATTCCTGGGGTCCATaGCAAACACCGTCCCGCGGTACGGCACAGAGGGCT +
Preference number: 6 (lower is better)
Translates to: GSGAPCNHSWGP*QTPSRGTAQRA
Trigger: AGCCCTCTGTGCCGTACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATGGTTACATGGAGCCCCACTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GAGGAGGGTGGTAGTGGGGCTCCATGTAACCATTCCTaGGGTCCATGGCAAACACCGTCCCGCGGTACGGCA +
Preference number: 6 (lower is better)
Translates to: EEGGSGAPCNHS*GPWQTPSRGTA
Trigger: TGCCGTACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATGGTTACATGGAGCCCCACTACCACCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp ATCTACCCGGCAGTCTGCACTGGGGAGATGAGAAGTTaGGGCAGGATGACCAGCGGCGGAGGGAGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: IYPAVCTGEMRS*GRMTSGGGSLL
Trigger: AAGGAGGCTCCCTCCGCCGCTGGTCATCCTGCCCCAACTTCTCATCTCCCCAGTGCAGACTGCCGGGTAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS TCA 72 bp CCCGAGCCCCTGGGCTGGGGAGGTCTTCATCGGGTTTaGTCTTGGACCTCTTGTTGTGCATCGGGTCACCAG +
Preference number: 6 (lower is better)
Translates to: PEPLGWGGLHRV*SWTSCCASGHQ
Trigger: CTGGTGACCCGATGCACAACAAGAGGTCCAAGATCAAACCCGATGAAGACCTCCCCAGCCCAGGGGCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp CAGTTCCCATACTGCGGGGCCTTACAGGGCTGTTCATaGAAGGCGTTTCCACTGGTGCCACTTCCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: QFPYCGALQGCS*KAFPLVPLPGL
Trigger: CAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAAGGCCCCGCAGTATGGGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp TCGGGTCACCAGTGCTGCTCACTGCAGACTCACTCGTaGGCTTGTTCTGCTGTGAGGACTCAGAAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: SGHQCCSLQTHS*ACSAVRTQKGR
Trigger: CCGGCCCTTCTGAGTCCTCACAGCAGAACAAGCCCACGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS GCA 72 bp GGGGCCACTGGCTGCCTGTTGAGACAGTTCCCATACTaGGGGGCCTTACAGGGCTGTTCATGGAAGGCGTTT +
Preference number: 6 (lower is better)
Translates to: GATGCLLRQFPY*GALQGCSWKAF
Trigger: AAACGCCTTCCATGAACAGCCCTGTAAGGCCCCGCAGTATGGGAACTGTCTCAACAGGCAGCCAGTGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GGCACAGAGGGCTCCGCCACGTGTGGCAGGGACCCATaGATCTCTTTCTTGATCAATGAGGCCCTCTCGTCA +
Preference number: 6 (lower is better)
Translates to: GTEGSATCGRDP*ISFLINEALSS
Trigger: TGACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCCTCTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GCGGGAGGAGCTATGGGAAAGGTTCTGAATGATACTTaGGCTCAGGGCCCCCGACATCAGGCTGGAGTGGTC +
Preference number: 6 (lower is better)
Translates to: AGGAMGKVLNDT*AQGPRHQAGVV
Trigger: GACCACTCCAGCCTGATGTCGGGGGCCCTGAGCCCAAGTATCATTCAGAACCTTTCCCATAGCTCCTCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GGATCTGTGGCTGAGTCGTTTGTGCAGCAGCAGGGATaGACAGCGCGGATGCATCCAATCCTCCTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: GSVAESFVQQQG*TARMHPILLVQ
Trigger: CTGGACCAGGAGGATTGGATGCATCCGCGCTGTCCATCCCTGCTGCTGCACAAACGACTCAGCCACAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437480.1
CDS CCA 72 bp ACAGCAGATGGTAGTGGGGCTCCATGTAACCATTCCTaGGGTCCATGGCAAACACCGTCCCGCGGTACGGCA +
Preference number: 6 (lower is better)
Translates to: TADGSGAPCNHS*GPWQTPSRGTA
Trigger: TGCCGTACCGCGGGACGGTGTTTGCCATGGACCCCAGGAATGGTTACATGGAGCCCCACTACCATCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642432.1
CDS CCA 72 bp TGTACCCAAGGCCAGAATCTACCCGGCAGTCTGCACTaGGGAGATGAGAAGTTGGGGCAGGATGACCAGCGG +
Preference number: 6 (lower is better)
Translates to: CTQGQNLPGSLH*GDEKLGQDDQR
Trigger: CCGCTGGTCATCCTGCCCCAACTTCTCATCTCCCCAGTGCAGACTGCCGGGTAGATTCTGGCCTTGGGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS CAA 72 bp GCCCCTGGGCTGGGGAGGTCTTCATCGGGTTTGATCTaGGACCTCTTGTTGTGCATCGGGTCACCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: APGLGRSSSGLI*DLLLCIGSPVL
Trigger: CAGCACTGGTGACCCGATGCACAACAAGAGGTCCAAGATCAAACCCGATGAAGACCTCCCCAGCCCAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp GCCGAGCTGATGGTGCTGGCGCTGCTGTCCCTTCTGTaGAGCATGTTCAGCATAGTGACGTCCACCCCAGAG +
Preference number: 6 (lower is better)
Translates to: AELMVLALLSLL*SMFSIVTSTPE
Trigger: CTCTGGGGTGGACGTCACTATGCTGAACATGCTCAACAGAAGGGACAGCAGCGCCAGCACCATCAGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp ACCACGTCGTCCGGCAGGAAATCCTCATCGTTCAGGTaGGCATCAGCGTCCATGGTCAGGGACTCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: TTSSGRKSSSFR*ASASMVRDSRV
Trigger: CACCCTGGAGTCCCTGACCATGGACGCTGATGCCAACCTGAACGATGAGGATTTCCTGCCGGACGACGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp TCTGCATGCCATTCACCATGCTGCCAGCTGACTCATTaGGCGCTACCGGCAGGCCGAAATTCAGCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: SACHSPCCQLTH*ALPAGRNSAGP
Trigger: GGGGCCAGCTGAATTTCGGCCTGCCGGTAGCGCCAAATGAGTCAGCTGGCAGCATGGTGAATGGCATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp GCCCCTGGGCTGGGGAGGTCTTCATCGGGTTTGATCTTGGACCTCTaGTTGTGCATCGGGTCACCAGTGCTGCTCACTGCAGACTCACTC +
Preference number: 6 (lower is better)
Translates to: APGLGRSSSGLILDL*LCIGSPVLLTADSL
Trigger: GAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGATGCACAACAAGAGGTCCAAGATCAAACCCGATGAAGACCTCCCCAGCCCAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp CCTGGGCTGGGGAGGTCTTCATCGGGTTTGATCTTGGACCTCTTGTaGTGCATCGGGTCACCAGTGCTGCTCACTGCAGACTCACTCGTG +
Preference number: 6 (lower is better)
Translates to: PGLGRSSSGLILDLL*CIGSPVLLTADSLV
Trigger: CACGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGATGCACAACAAGAGGTCCAAGATCAAACCCGATGAAGACCTCCCCAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp CCCTTTCAAGGTAGCCCATCCAAGAGGATCTGTGGCTaGGTCGTTTGTGCAGCAGCAGGGATGGACAGCGCG +
Preference number: 6 (lower is better)
Translates to: PFQGSPSKRICG*VVCAAAGMDSA
Trigger: CGCGCTGTCCATCCCTGCTGCTGCACAAACGACTCAGCCACAGATCCTCTTGGATGGGCTACCTTGAAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437480.1
CDS GCA 72 bp GGCACTTTGCTGTCGTCCGGGAGGGCGCTGGGGAAGTaGTGCTCGTACCCTGCTTGGTTCTGGGAATTTAAA +
Preference number: 6 (lower is better)
Translates to: GTLLSSGRALGK*CSYPAWFWEFK
Trigger: TTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GCGCTGGGGAAGTGCTGCTCGTACCCTGCTTGGTTCTaGGAATTTAAATACTGCACCACGTCGTCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: ALGKCCSYPAWF*EFKYCTTSSGR
Trigger: CCTGCCGGACGACGTGGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GGGAGGGCGCTGGGGAAGTGCTGCTCGTACCCTGCTTaGTTCTGGGAATTTAAATACTGCACCACGTCGTCC +
Preference number: 6 (lower is better)
Translates to: GRALGKCCSYPA*FWEFKYCTTSS
Trigger: GGACGACGTGGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GGGCCTTACAGGGCTGTTCATGGAAGGCGTTTCCACTaGTGCCACTTCCGGGGCTGTTGTGGAGCATCAAGT +
Preference number: 6 (lower is better)
Translates to: GPYRAVHGRRFH*CHFRGCCGASS
Trigger: ACTTGATGCTCCACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp TTCTGCTGTGAGGACTCAGAAGGGCCGGAGCTGACCTaGACGGGGTTCAGAACCGTAGGGATCCCTGGAATA +
Preference number: 6 (lower is better)
Translates to: FCCEDSEGPELT*TGFRTVGIPGI
Trigger: TATTCCAGGGATCCCTACGGTTCTGAACCCCGTCCAGGTCAGCTCCGGCCCTTCTGAGTCCTCACAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS CAA 90 bp AAATACTGCACCACGTCGTCCGGCAGGAAATCCTCATCGTTCAGGTaGGCATCAGCGTCCATGGTCAGGGACTCCAGGGTGACGTTCTCG +
Preference number: 6 (lower is better)
Translates to: KYCTTSSGRKSSSFR*ASASMVRDSRVTFS
Trigger: CGAGAACGTCACCCTGGAGTCCCTGACCATGGACGCTGATGCCAACCTGAACGATGAGGATTTCCTGCCGGACGACGTGGTGCAGTATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp CCTTACAGGGCTGTTCATGGAAGGCGTTTCCACTGGTaGCACTTCCGGGGCTGTTGTGGAGCATCAAGTGCT +
Preference number: 6 (lower is better)
Translates to: PYRAVHGRRFHW*HFRGCCGASSA
Trigger: AGCACTTGATGCTCCACAACAGCCCCGGAAGTGGCACCAGTGGAAACGCCTTCCATGAACAGCCCTGTAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp TTGTTCTGTGAGGACTCAGAAGGGCCGGAGCTGACCTaGACGGGGTTCAGAACCGTAGGGATCCCTGGAATA +
Preference number: 6 (lower is better)
Translates to: LFCEDSEGPELT*TGFRTVGIPGI
Trigger: TATTCCAGGGATCCCTACGGTTCTGAACCCCGTCCAGGTCAGCTCCGGCCCTTCTGAGTCCTCACAGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp CGTGCTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTaGCTTGCAAAGCAAGGGCTGTGGTTGCAGTGGAAA +
Preference number: 6 (lower is better)
Translates to: RAPSIWSLPGFS*LAKQGLWLQWK
Trigger: TTTCCACTGCAACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp GGGAGAAGCGTCATGGGCCCACCCAAGCTGCAGGTGTaGTTGGACTGTGTGCCATTTCCTATGAGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: GRSVMGPPKLQV*LDCVPFPMRGE
Trigger: CTCTCCTCTCATAGGAAATGGCACACAGTCCAACAACACCTGCAGCTTGGGTGGGCCCATGACGCTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp ACAGAGGGCTCCGCCACGTGTGGCAGGGACCCATGGATCTCTTTCTaGATCAATGAGGCCCTCTCGTCACTCGATGTTGAAGGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: TEGSATCGRDPWISF*INEALSSLDVEGSS
Trigger: TGAGGAACCTTCAACATCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACACGTGGCGGAGCCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp CCGCCACGTGTGGCAGGGACCCATGGATCTCTTTCTTaGTCAATGAGGCCCTCTCGTCACTCGATGTTGAAG +
Preference number: 6 (lower is better)
Translates to: PPRVAGTHGSLS*SMRPSRHSMLK
Trigger: CTTCAACATCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACACGTGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp TCTTGGACCTCTTGTTGTGCATCGGGTCACCAGTGCTaGTCACTGCAGACTCACTCGTGGGCTTGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: SWTSCCASGHQC*SLQTHSWACSV
Trigger: CACAGAACAAGCCCACGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGATGCACAACAAGAGGTCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp ACTTTGCTGTCGTCCGGGAGGGCGCTGGGGAAGTGCTaGTCGTACCCTGCTTGGTTCTGGGAATTTAAATAC +
Preference number: 6 (lower is better)
Translates to: TLLSSGRALGKC*SYPAWFWEFKY
Trigger: GTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCAGCACTTCCCCAGCGCCCTCCCGGACGACAGCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp TCTTGGACCTCTTGTTGTGCATCGGGTCACCAGTGCTaGTCACTGCAGACTCACTCGTGGGCTTGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SWTSCCASGHQC*SLQTHSWACSA
Trigger: AGCAGAACAAGCCCACGAGTGAGTCTGCAGTGAGCAGCACTGGTGACCCGATGCACAACAAGAGGTCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677288.1
CDS CAA 72 bp GGGAGGTCTTCATCGGGTTTGATCTTGGACCTCTTGTaGTGCATCGGGTCACCAGTGCTGCTCACTGCAGAC +
Preference number: 6 (lower is better)
Translates to: GRSSSGLILDLL*CIGSPVLLTAD
Trigger: GTCTGCAGTGAGCAGCACTGGTGACCCGATGCACAACAAGAGGTCCAAGATCAAACCCGATGAAGACCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp CTGGGGAGGTCTTCATCGGGTTTGATCTTGGACCTCTaGTTGTGCATCGGGTCACCAGTGCTGCTCACTGCA +
Preference number: 6 (lower is better)
Translates to: LGRSSSGLILDL*LCIGSPVLLTA
Trigger: TGCAGTGAGCAGCACTGGTGACCCGATGCACAACAAGAGGTCCAAGATCAAACCCGATGAAGACCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp CTTGACGGTTTTCACCTGGAGGCATTCTTCCCGCTTTaGGGTAGTGTTGCTGAGGTCCTGCTGCTCACCAAG +
Preference number: 6 (lower is better)
Translates to: LDGFHLEAFFPL*GSVAEVLLLTK
Trigger: CTTGGTGAGCAGCAGGACCTCAGCAACACTACCTCAAAGCGGGAAGAATGCCTCCAGGTGAAAACCGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp CAGGGCTTGGCTGAGATGTCATTGGCTTCTCTGCCTTaGCGGTTTTCACCTGGAGGCATTCTTCCCGCTTTG +
Preference number: 6 (lower is better)
Translates to: QGLAEMSLASLP*RFSPGGILPAL
Trigger: CAAAGCGGGAAGAATGCCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAATGACATCTCAGCCAAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp TCAGAGGAAGCTCGAGCCCACTGTTGGAATAGTTGCTaGTGGGGGACTGTTGGCTGCTGCATGAAGACTGAC +
Preference number: 6 (lower is better)
Translates to: SEEARAHCWNSC*WGTVGCCMKTD
Trigger: GTCAGTCTTCATGCAGCAGCCAACAGTCCCCCATCAGCAACTATTCCAACAGTGGGCTCGAGCTTCCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp CAGGCAGCTCTCTGGCCCTTGGTAGATGTTGATGTGTaGGGTAGCACTAATCTGCCCAAGCATCTGCTGACC +
Preference number: 6 (lower is better)
Translates to: QAALWPLVDVDV*GSTNLPKHLLT
Trigger: GGTCAGCAGATGCTTGGGCAGATTAGTGCTACCTCACACATCAACATCTACCAAGGGCCAGAGAGCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp AGCACAGCGGATGGGGCTGCCCTTTCATCTCCATCTTaGTACCATTCACCCTGCAGGTCTGACTTGTGTCAC +
Preference number: 6 (lower is better)
Translates to: STADGAALSSPS*YHSPCRSDLCH
Trigger: GTGACACAAGTCAGACCTGCAGGGTGAATGGTATCAAGATGGAGATGAAAGGGCAGCCCCATCCGCTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GCGGATATAGTCCATGTAGGGATTAATGTAGGGATGTaGAGGGCTGAAGGGAGACTCGGAAGCAGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: ADIVHVGINVGM*RAEGRLGSSSG
Trigger: CCCACTGCTGCTTCCGAGTCTCCCTTCAGCCCTCCACATCCCTACATTAATCCCTACATGGACTATATCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GTCCAGGACTTTCATCCTAACACAGTCCCCAGGCTCTaGCTAGCTACTTTGCGCCAACTTCTCTTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: VQDFHPNTVPRL*LATLRQLLLVS
Trigger: GCTCACCAAGAGAAGTTGGCGCAAAGTAGCTAGCCAGAGCCTGGGGACTGTGTTAGGATGAAAGTCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479210.1
ENST00000677288.1
CDS CAA 72 bp TCCGCCACGTGTGGCAGGGACCCATGGATCTCTTTCTaGATCAATGAGGCCCTCTCGTCACTCGATGTTGAA +
Preference number: 6 (lower is better)
Translates to: SATCGRDPWISF*INEALSSLDVE
Trigger: TTCAACATCGAGTGACGAGAGGGCCTCATTGATCAAGAAAGAGATCCATGGGTCCCTGCCACACGTGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp CCATGTATTTGCACAGCGGCCGGCCCTCCATACCTTTaGCTAAAGGGTTCTTTGACTTGGAGACGCAGACAG +
Preference number: 6 (lower is better)
Translates to: PCICTAAGPPYL*LKGSLTWRRRQ
Trigger: CTGTCTGCGTCTCCAAGTCAAAGAACCCTTTAGTCAAAGGTATGGAGGGCCGGCCGCTGTGCAAATACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS TCA 72 bp GCTCAGCAATGTGAGGCTGCTGGGATCGCTTCACTCTaGTTGTGTTGGCTGTCTCGTCATGGTCATGAGATG +
Preference number: 6 (lower is better)
Translates to: AQQCEAAGIASL*LCWLSRHGHEM
Trigger: CATCTCATGACCATGACGAGACAGCCAACACAATCAGAGTGAAGCGATCCCAGCAGCCTCACATTGCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678978.1
CDS CCA 72 bp CGTTGCTGCATGAAGCAGGACTCGAACACGCACTTGTaGGCGCTTGCAGACAGACATCTATCCGATTTCTCA +
Preference number: 6 (lower is better)
Translates to: RCCMKQDSNTHL*ALADRHLSDFS
Trigger: TGAGAAATCGGATAGATGTCTGTCTGCAAGCGCCCACAAGTGCGTGTTCGAGTCCTGCTTCATGCAGCAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CAA 72 bp TCACGTTGCTGCATGAAGCAGGACTCGAACACGCACTaGTGGGCGCTTGCAGACAGACATCTATCCGATTTC +
Preference number: 6 (lower is better)
Translates to: SRCCMKQDSNTH*WALADRHLSDF
Trigger: GAAATCGGATAGATGTCTGTCTGCAAGCGCCCACAAGTGCGTGTTCGAGTCCTGCTTCATGCAGCAACGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CAA 72 bp GCCATGTATTTGCACAGCGGCCGGCCCTCCATACCTTaGACTAAAGGGTTCTTTGACTTGGAGACGCAGACA +
Preference number: 6 (lower is better)
Translates to: AMYLHSGRPSIP*TKGFFDLETQT
Trigger: TGTCTGCGTCTCCAAGTCAAAGAACCCTTTAGTCAAAGGTATGGAGGGCCGGCCGCTGTGCAAATACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS CAA 90 bp CACAGCGGCCGGCCCTCCATACCTTTGACTAAAGGGTTCTTTGACTaGGAGACGCAGACAGTCCATCATTTCAAACTGAAGTGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: HSGRPSIPLTKGFFD*ETQTVHHFKLKWQL
Trigger: CAGCTGCCACTTCAGTTTGAAATGATGGACTGTCTGCGTCTCCAAGTCAAAGAACCCTTTAGTCAAAGGTATGGAGGGCCGGCCGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS CAA 90 bp AATGAGGCCCTCTCGTCACTCGATGTTGAAGGTTCCTCACTGACTTaGCTGAGCCCCTGGACATTCTGTGGCTGCATAGTGATTGCGTTT +
Preference number: 6 (lower is better)
Translates to: NEALSSLDVEGSSLT*LSPWTFCGCIVIAF
Trigger: AAACGCAATCACTATGCAGCCACAGAATGTCCAGGGGCTCAGCAAAGTCAGTGAGGAACCTTCAACATCGAGTGACGAGAGGGCCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp GAGATGGATCGTAATGGTAACGGCCCTCATGATGTCTGGCATCAATaGGTACAGGAGGATGGAAGGCAGGGAAAAGATGAGGAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: EMDRNGNGPHDVWHQ*VQEDGRQGKDEEGG
Trigger: ACCACCCTCCTCATCTTTTCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTACGATCCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp AATGGCACTGCCATGTATTTGCACAGCGGCCGGCCCTCCATACCTTaGACTAAAGGGTTCTTTGACTTGGAGACGCAGACAGTCCATCAT +
Preference number: 6 (lower is better)
Translates to: NGTAMYLHSGRPSIP*TKGFFDLETQTVHH
Trigger: ATGATGGACTGTCTGCGTCTCCAAGTCAAAGAACCCTTTAGTCAAAGGTATGGAGGGCCGGCCGCTGTGCAAATACATGGCAGTGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS GCA 72 bp TGCTCGTACCCTGCTTGGTTCTGGGAATTTAAATACTaGACCACGTCGTCCGGCAGGAAATCCTCATCGTTC +
Preference number: 6 (lower is better)
Translates to: CSYPAWFWEFKY*TTSSGRKSSSF
Trigger: GAACGATGAGGATTTCCTGCCGGACGACGTGGTGCAGTATTTAAATTCCCAGAACCAAGCAGGGTACGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp CATGAAGCAGGACTCGAACACGCACTTGTGGGCGCTTaGAGACAGACATCTATCCGATTTCTCATGGTAACC +
Preference number: 6 (lower is better)
Translates to: HEAGLEHALVGA*RQTSIRFLMVT
Trigger: GGTTACCATGAGAAATCGGATAGATGTCTGTCTGCAAGCGCCCACAAGTGCGTGTTCGAGTCCTGCTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 72 bp GAGATGGATCGTAATGGTAACGGCCCTCATGATGTCTaGCATCAATTGGTACAGGAGGATGGAAGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: EMDRNGNGPHDV*HQLVQEDGRQG
Trigger: TCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTACGATCCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GATGTCATTGGCTTCTCTGCCTTGACGGTTTTCACCTaGAGGCATTCTTCCCGCTTTGAGGTAGTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: DVIGFSALTVFT*RHSSRFEVVLL
Trigger: CAGCAACACTACCTCAAAGCGGGAAGAATGCCTCCAGGTGAAAACCGTCAAGGCAGAGAAGCCAATGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp AATATGGTCGTTATTTATATGGTGCACAAGCTGCTCTaGGGTGTCGAACTCCCTCGCGCAGCCTTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: NMVVIYMVHKLL*GVELPRAAFPV
Trigger: CACTGGGAAGGCTGCGCGAGGGAGTTCGACACCCAAGAGCAGCTTGTGCACCATATAAATAACGACCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp AATAATACCAGCCCGGCTAATGGCACTGCCATGTATTaGCACAGCGGCCGGCCCTCCATACCTTTGACTAAA +
Preference number: 6 (lower is better)
Translates to: NNTSPANGTAMY*HSGRPSIPLTK
Trigger: TTTAGTCAAAGGTATGGAGGGCCGGCCGCTGTGCAAATACATGGCAGTGCCATTAGCCGGGCTGGTATTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS CAA 90 bp CCATTCACTTGTTTTAGCCTTTCTAGTTTTACGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTCCTGGCTTGCAAAGCAAGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PFTCFSLSSFTCSIH*VPAGFLLACKARAV
Trigger: CACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACGTAAAACTAGAAAGGCTAAAACAAGTGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS TCA 72 bp TTCATCTCCATCTTGATACCATTCACCCTGCAGGTCTaGCTTGTGTCACTGAGCTGTCCTGACTGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: FISILIPFTLQV*LVSLSCPDCRA
Trigger: TGCTCTGCAGTCAGGACAGCTCAGTGACACAAGTCAGACCTGCAGGGTGAATGGTATCAAGATGGAGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp GAAACACACTGTCCACCATGGCAACAGGCAGAAGTCTaGTGCAAAAATGTAAGCAAACAGCCCACTGCTCCA +
Preference number: 6 (lower is better)
Translates to: ETHCPPWQQAEV*CKNVSKQPTAP
Trigger: TGGAGCAGTGGGCTGTTTGCTTACATTTTTGCAGCAGACTTCTGCCTGTTGCCATGGTGGACAGTGTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS GCA 72 bp GCTGCTCTGTGTAAACGCGGCACCTTAAATGATTATTaGATGGACCACGGTTACTTTGTGTGTCTGTGCGCG +
Preference number: 6 (lower is better)
Translates to: AALCKRGTLNDY*MDHGYFVCLCA
Trigger: CGCGCACAGACACACAAAGTAACCGTGGTCCATGCAATAATCATTTAAGGTGCCGCGTTTACACAGAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS CCA 72 bp TTCCTCACTGACTTTGCTGAGCCCCTGGACATTCTGTaGCTGCATAGTGATTGCGTTTCTTCTCTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: FLTDFAEPLDIL*LHSDCVSSLSV
Trigger: CACAGAGAGAGAAGAAACGCAATCACTATGCAGCCACAGAATGTCCAGGGGCTCAGCAAAGTCAGTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp GTAATGGTAACGGCCCTCATGATGTCTGGCATCAATTaGTACAGGAGGATGGAAGGCAGGGAAAAGATGAGG +
Preference number: 6 (lower is better)
Translates to: VMVTALMMSGIN*YRRMEGREKMR
Trigger: CCTCATCTTTTCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CCA 72 bp AGAACAGACAATACTTACAACACAGTCCCCAGGCTCTaGCTAGCTACTTTGCGCCAACTTCTCTTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: RTDNTYNTVPRL*LATLRQLLLVS
Trigger: GCTCACCAAGAGAAGTTGGCGCAAAGTAGCTAGCCAGAGCCTGGGGACTGTGTTGTAAGTATTGTCTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 72 bp AAGCAAACAGCCCACTGCTCCAAGAGCATCTGCCAATaGACTTTAACAGCCAAACACAAGGCAACTGTTCCC +
Preference number: 6 (lower is better)
Translates to: KQTAHCSKSICQ*TLTAKHKATVP
Trigger: GGGAACAGTTGCCTTGTGTTTGGCTGTTAAAGTCCATTGGCAGATGCTCTTGGAGCAGTGGGCTGTTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CAA 72 bp CGTAATGGTAACGGCCCTCATGATGTCTGGCATCAATaGGTACAGGAGGATGGAAGGCAGGGAAAAGATGAG +
Preference number: 6 (lower is better)
Translates to: RNGNGPHDVWHQ*VQEDGRQGKDE
Trigger: CTCATCTTTTCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp CAAGTGGAAGTTAACAAATCCCTGCCCCCAGAGAGCTaGCCAAAGCATCACGTTTTAGAAACTGTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: QVEVNKSLPPES*PKHHVLETVPE
Trigger: TTCTGGGACAGTTTCTAAAACGTGATGCTTTGGGCAGCTCTCTGGGGGCAGGGATTTGTTAACTTCCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS GCA 72 bp CAAGGCAACTGTTCCCGCTTCTCTATGTTTAACAGCTaGAAGCTCGGGGGTCAAACCGAAACATGCAATTCA +
Preference number: 6 (lower is better)
Translates to: QGNCSRFSMFNS*KLGGQTETCNS
Trigger: TGAATTGCATGTTTCGGTTTGACCCCCGAGCTTGCAGCTGTTAAACATAGAGAAGCGGGAACAGTTGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 72 bp GTTTTAGCCTTTCTAGTTTTACGTGCTCCATCCATTTaGTCCCTGCCGGGTTTCTCCTGGCTTGCAAAGCAA +
Preference number: 6 (lower is better)
Translates to: VLAFLVLRAPSI*SLPGFSWLAKQ
Trigger: TTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACGTAAAACTAGAAAGGCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp TGTTTTAGCCTTTCTAGTTTTACGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTCCTGGCTTGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: CFSLSSFTCSIH*VPAGFLLACKA
Trigger: TGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACGTAAAACTAGAAAGGCTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 90 bp TTTAGAACTAATAATACCAGCCCGGCTAATGGCACTGCCATGTATTaGCACAGCGGCCGGCCCTCCATACCTTTGACTAAAGGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: FRTNNTSPANGTAMY*HSGRPSIPLTKGFF
Trigger: AAAGAACCCTTTAGTCAAAGGTATGGAGGGCCGGCCGCTGTGCAAATACATGGCAGTGCCATTAGCCGGGCTGGTATTATTAGTTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS GCA 72 bp AGAAGTCTGCTGCAAAAATGTAAGCAAACAGCCCACTaGTCCAAGAGCATCTGCCAATGGACTTTAACAGCC +
Preference number: 6 (lower is better)
Translates to: RSLLQKCKQTAH*SKSICQWTLTA
Trigger: GGCTGTTAAAGTCCATTGGCAGATGCTCTTGGAGCAGTGGGCTGTTTGCTTACATTTTTGCAGCAGACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 72 bp TTTGTACCTCCTTCTCTTTTCATATCCATGCTCAAGTaGAAGTTAACAAATCCCTGCCCCCAGAGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: FVPPSLFISMLK*KLTNPCPQRAA
Trigger: GGCAGCTCTCTGGGGGCAGGGATTTGTTAACTTCCACTTGAGCATGGATATGAAAAGAGAAGGAGGTACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CAA 72 bp TGTCTTCTCATATGCACTACCAACATATACTGGGCTTaGAAGGGTTTCTGCTCTCTTGAGCAGTCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: CLLICTTNIYWA*KGFCSLEQSSH
Trigger: GTGGCTGGACTGCTCAAGAGAGCAGAAACCCTTCAAAGCCCAGTATATGTTGGTAGTGCATATGAGAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp ACCAGCTTTCGTGTCTTGCTGACTGAAGCCCACGGTTaGGTCATAGAACTGACCAGAGTAATTCTGCAGATT +
Preference number: 6 (lower is better)
Translates to: TSFRVLLTEAHG*VIELTRVILQI
Trigger: AATCTGCAGAATTACTCTGGTCAGTTCTATGACCAAACCGTGGGCTTCAGTCAGCAAGACACGAAAGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS CAA 72 bp CTTGCAATCATCCCGCACCTAGGTAAATGTATGGGTTaGTACGCATTCTTTGGAGCTTCCCCCTTTCAAGGT +
Preference number: 6 (lower is better)
Translates to: LAIIPHLGKCMG*YAFFGASPFQG
Trigger: ACCTTGAAAGGGGGAAGCTCCAAAGAATGCGTACAAACCCATACATTTACCTAGGTGCGGGATGATTGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437480.1
CDS CAA 72 bp GACGTTTGCAATAAAAGTCTGGAGAAGGTAATCACGTaGCTGCATGAAGCAGGACTCGAACACGCACTTGTG +
Preference number: 6 (lower is better)
Translates to: DVCNKSLEKVIT*LHEAGLEHALV
Trigger: CACAAGTGCGTGTTCGAGTCCTGCTTCATGCAGCAACGTGATTACCTTCTCCAGACTTTTATTGCAAACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CAA 72 bp CGGCCCTCCATACCTTTGACTAAAGGGTTCTTTGACTaGGAGACGCAGACAGTCCATCATTTCAAACTGAAG +
Preference number: 6 (lower is better)
Translates to: RPSIPLTKGFFD*ETQTVHHFKLK
Trigger: CTTCAGTTTGAAATGATGGACTGTCTGCGTCTCCAAGTCAAAGAACCCTTTAGTCAAAGGTATGGAGGGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS GCA 72 bp ATTCCATTCACTTGTTTTAGCCTTTCTAGTTTTACGTaGTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: IPFTCFSLSSFT*SIHLVPAGFLL
Trigger: CAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACGTAAAACTAGAAAGGCTAAAACAAGTGAATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395925.8
ENST00000479210.1
ENST00000677288.1
ENST00000677605.1
ENST00000678429.1
CDS GCA 72 bp AAATGTAAGCAAACAGCCCACTGCTCCAAGAGCATCTaGCAATGGACTTTAACAGCCAAACACAAGGCAACT +
Preference number: 6 (lower is better)
Translates to: KCKQTAHCSKSI*QWTLTAKHKAT
Trigger: AGTTGCCTTGTGTTTGGCTGTTAAAGTCCATTGGCAGATGCTCTTGGAGCAGTGGGCTGTTTGCTTACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS GCA 72 bp GTTGAGCCGAGTTGTTCAATAAAGTTTGAGAGTCAGTaGAGACAGGCTACGCCAGGCCAAATTATTGACAGA +
Preference number: 6 (lower is better)
Translates to: VEPSCSIKFESQ*RQATPGQIIDR
Trigger: TCTGTCAATAATTTGGCCTGGCGTAGCCTGTCTGCACTGACTCTCAAACTTTATTGAACAACTCGGCTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 72 bp CAGGCCAAATTATTGACAGAAACACACTGTCCACCATaGCAACAGGCAGAAGTCTGCTGCAAAAATGTAAGC +
Preference number: 6 (lower is better)
Translates to: QAKLLTETHCPP*QQAEVCCKNVS
Trigger: GCTTACATTTTTGCAGCAGACTTCTGCCTGTTGCCATGGTGGACAGTGTGTTTCTGTCAATAATTTGGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS CCA 72 bp GTAAATTATATGTTTAATAACACAGTCCCCAGGCTCTaGCTAGCTACTTTGCGCCAACTTCTCTTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: VNYMFNNTVPRL*LATLRQLLLVS
Trigger: GCTCACCAAGAGAAGTTGGCGCAAAGTAGCTAGCCAGAGCCTGGGGACTGTGTTATTAAACATATAATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642432.1
CDS TCA 72 bp GTATACACACTCCACAATACAAACAGCTACGAGGCTTaGAAGCACTCTGTATACAGTGAAAGGGACACTTTC +
Preference number: 6 (lower is better)
Translates to: VYTLHNTNSYEA*KHSVYSERDTF
Trigger: GAAAGTGTCCCTTTCACTGTATACAGAGTGCTTTCAAGCCTCGTAGCTGTTTGTATTGTGGAGTGTGTATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS TCA 72 bp ACCAAGTTGCTTTTGACGGGCATTCATATGAAAACCTaGCAGTATACACACTCCACAATACAAACAGCTACG +
Preference number: 6 (lower is better)
Translates to: TKLLLTGIHMKT*QYTHSTIQTAT
Trigger: CGTAGCTGTTTGTATTGTGGAGTGTGTATACTGTCAGGTTTTCATATGAATGCCCGTCAAAAGCAACTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643264.1
CDS GCA 72 bp CTAATTACTCGAATTTTCAGCAAAGTGTATATACTGTaGTCTGGAAAGCCTAACTGGAGAGAAGAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: LITRIFSKVYIL*SGKPNWREEGG
Trigger: TCCTCCCTCTTCTCTCCAGTTAGGCTTTCCAGAGCACAGTATATACACTTTGCTGAAAATTCGAGTAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677990.1
CDS CAA 72 bp ATGACTTGCAGAACAGAAAAGACAATGAGGTATATTTaGGTCTTTACAGAGAATTTGCTGACTACTACAAGG +
Preference number: 6 (lower is better)
Translates to: MTCRTEKTMRYI*VFTENLLTTTR
Trigger: CCTTGTAGTAGTCAGCAAATTCTCTGTAAAGACCAAAATATACCTCATTGTCTTTTCTGTTCTGCAAGTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642432.1
ENST00000643264.1
ENST00000647255.1