RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111087

Ensembl transcript IDs: ENST00000228682.7, ENST00000527742.1, ENST00000528432.1, ENST00000528467.1, ENST00000530789.1, ENST00000532291.5, ENST00000543426.5, ENST00000546141.5

Found 573 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCAGGAAATGCGATCTGTaGTGGATGAGATTCCCTACT +
Preference number: 2 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSRKCDL*WMRFPT
Trigger: AGTAGGGAATCTCATCCATCACAGATCGCATTTCCT...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
3UTR-3UTR GCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCCCTGGGGCATCTTGTaGATGGGACTGCAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPPWGIL*MGLQLP
Trigger: GGGGAGCTGCAGTCCCATGCACAAGATGCCCCAGGG...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
3UTR-3UTR GCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCCTGGGGCATCTTGTaGATGGGACTGCAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSPWGIL*MGLQLP
Trigger: GGGGAGCTGCAGTCCCATGCACAAGATGCCCCAGGG...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
3UTR-3UTR TCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTAGGAAATGCGATCTGTaGTGGATGAGATTCCCTACT +
Preference number: 2 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPRKCDL*WMRFPT
Trigger: AGTAGGGAATCTCATCCATCACAGATCGCATTTCCT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
3UTR-3UTR CCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACGGGGCATCTTGTGCATaGGACTGCAGCTCCCCCAAT +
Preference number: 2 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYGASCA*DCSSPN
Trigger: ATTGGGGGAGCTGCAGTCCCATGCACAAGATGCCCC...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
3UTR-3UTR GCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCTCTTGTGCATGGGACTaGAGCTCCCCCAATTTTTCT +
Preference number: 2 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLSCAWD*SSPNFS
Trigger: AGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGA...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
3UTR-3UTR GCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCTCTTGTGCATGGGACTaGAGCTCCCCCAATTTTTCT +
Preference number: 2 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSSCAWD*SSPNFS
Trigger: AGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGA...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
3UTR-3UTR TCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCAGGAAATGCGATCTGTaGTGGATGAGATTCCCTACT +
Preference number: 2 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSRKCDL*WMRFPT
Trigger: AGTAGGGAATCTCATCCATCACAGATCGCATTTCCT...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
3UTR-3UTR CAA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCATCCCTGGGGCATCTaGTGCATGGGACTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYHPWGI*CMGLQL
Trigger: GAGCTGCAGTCCCATGCACAAGATGCCCCAGGGATG...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGGGCCATCCCCACGGTaGCGTTTGGTCACATGGGCG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSGPSPR*RLVTWA
Trigger: CGCCCATGTGACCAAACGGCACCGTGGGGATGGCCC...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTCCGGGGAGTGGTCACTaGTGCAGGATGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAPGSGH*CRMTGP
Trigger: GGGCCCAGTCATCCTGCAGCAGTGACCACTCCCCGG...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCCCCGGGCAGAGTCATaGGGACCACAAGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSPRAES*GPQGWT
Trigger: GGTCCAGCCTTGTGGTCCCCATGACTCTGCCCGGGG...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCTGGGCCCCAGGGCTTaGCTGTGGCTTCATGGCACC +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSLGPRA*LWLHGT
Trigger: GGTGCCATGAAGCCACAGCCAAGCCCTGGGGCCCAG...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTCGCGGCGGGACACAGTaGTACCGGTGTGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAARGGTQ*YRCGTS
Trigger: GCTTGTCCCACACCGGTACCACTGTGTCCCGCCGCG...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCGCGGCGGGACACAGTaGTACCGGTGTGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSRGGTQ*YRCGTS
Trigger: GCTTGTCCCACACCGGTACCACTGTGTCCCGCCGCG...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCCAGAGCTGCCCCGCTaGTCATGGGAAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSPELPR*SWEGGG
Trigger: TCCTCCTCCTTCCCATGATCAGCGGGGCAGCTCTGG...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGGGAGTGGTCACTGCTaGAGGATGACTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAGSGHC*RMTGPQ
Trigger: CTGGGGCCCAGTCATCCTGCAGCAGTGACCACTCCC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCCCTGGGGCATCTTGTaGATGGGACTGCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSPWGIL*MGLQLP
Trigger: GGGGAGCTGCAGTCCCATGCACAAGATGCCCCAGGG...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTCTCCCTGCCGGGGAGTaGTCACTGCTGCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAALPAGE*SLLQDD
Trigger: GTCATCCTGCAGCAGTGACCACTCCCCGGCAGGGAG...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGTTCAAGAGAGACTaGGGGGCCCACGCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAAFKRD*GAHAAG
Trigger: TCCCGCCGCGTGGGCCCCCCAGTCTCTCTTGAACGC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGGCTGGATGCTGCAGTaGGCGAAGTACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAGWMLQ*AKYHPL
Trigger: GAGGGGGTGGTACTTCGCCCACTGCAGCATCCAGCC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGGCTGGATGCTGCAGTaGGCGAAGTACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSGWMLQ*AKYHPL
Trigger: GAGGGGGTGGTACTTCGCCCACTGCAGCATCCAGCC...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTTACGAGGGAGCTGGGTaGGGTGCGGATAACCGTCTG +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAYEGAG*GADNRL
Trigger: CAGACGGTTATCCGCACCTCACCCAGCTCCCTCGTA...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCAAGGGTCCCCGGGACTaGGGATGTGGGATCATCCCA +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSKGPRD*GCGIIP
Trigger: TGGGATGATCCCACATCCTCAGTCCCGGGGACCCTT...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCACACTGGGGTGGGCATTaGGGCAGGGTGCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAHWGGH*GRVPVL
Trigger: CAGGACTGGCACCCTGCCTCAATGCCCACCCCAGTG...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCCGATCCAGGCTGGATaGTGCAGTGGGCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSPIQAG*CSGRST
Trigger: GGTACTTCGCCCACTGCAGCATCCAGCCTGGATCGG...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTCCGATCCAGGCTGGATaGTGCAGTGGGCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAPIQAG*CSGRST
Trigger: GGTACTTCGCCCACTGCAGCATCCAGCCTGGATCGG...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGTTCTGTCCTCCCCCTaGCACAGTGGGTGGGGTATG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSVLSSP*HSGWGM
Trigger: CATACCCCACCCACTGTGGCAGGGGGAGGACAGAAC...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCACTGTAGAAATGGATaGTGCCCGAGGCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSHCRNG*CPRQGA
Trigger: GGCCCCCTGCCTCGGGCACCATCCATTTCTACAGTG...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTCACCACTGTCTGTATTaGCTGCACTCCCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAHHCLY*LHSLPG
Trigger: CCCCGGCAGGGAGTGCAGCCAATACAGACAGTGGTG...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCCTCTGGACTCTAGCTaGAGCAGGACGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSPLDSS*SRTVSS
Trigger: GCTGCTGACCGTCCTGCTCCAGCTAGAGTCCAGAGG...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGGTTGGGGCCATAGTTaGTGGGTGGACCAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSGWGHS*WVDQAQ
Trigger: TTGGGCCTGGTCCACCCACCAACTATGGCCCCAACC...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGGAGTCAGACCCCACTaGGCACCCCTGTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSGVRPH*APLFWL
Trigger: AAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCC...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGCTCGCCATAGCTACTaGTTGGTGGTGGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSARHSY*LVVGSS
Trigger: CGATGACCCCACCACCAATCAGTAGCTATGGCGAGC...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR TCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCCTATTGGCCGGAGTTaGTGTAGCTGGTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSPIGRS*CSWSSL
Trigger: CAGGCTGGACCAGCTACATCAACTCCGGCCAATAGG...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGCACTGGCCCTCCGGGTaGCCCCTGCATTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGHWPSG*PLHWGC
Trigger: ACAACCCCAATGCAGGGGTCACCCGGAGGGCCAGTG...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCACCAGAGCTGCCCCGCTaGTCATGGGAAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAPELPR*SWEGGG
Trigger: TCCTCCTCCTTCCCATGATCAGCGGGGCAGCTCTGG...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCACTGTCTGTATTGGCTaGACTCCCTGCCGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSTVCIG*TPCRGV
Trigger: CACTCCCCGGCAGGGAGTGCAGCCAATACAGACAGT...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGCTGGAGCTGCTGCTaGGGCGTTCAAGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSCWSCC*GVQERL
Trigger: CAGTCTCTCTTGAACGCCGCAGCAGCAGCTCCAGCA...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGCCGGGACTGAGGATGTaGGATCATCCCACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGPGLRM*DHPTPG
Trigger: GCCCGGGGTGGGATGATCCCACATCCTCAGTCCCGG...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCACCCCACGGTGCCGTTTaGTCACATGGGCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAPHGAV*SHGRQD
Trigger: GTCCTGACGCCCATGTGACCAAACGGCACCGTGGGG...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGACCACTGCCCACCATaGAGGTCCCAACTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSDHCPP*RSQLLA
Trigger: AGCCAGAAGTTGGGACCTCCATGGTGGGCAGTGGTC...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCAAGAGGCAGAGAGCCTaGACCCCTCGCTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSKRQRA*TPRSIR
Trigger: CCTTATGGAGCGAGGGGTCCAGGCTCTCTGCCTCTT...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTGCCCACAGCCATGTTaGGGGGCCCAGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGCPQPC*GAQREV
Trigger: CACCTCCCTCTGGGCCCCCCAACATGGCTGTGGGCA...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCATCCTCCCCCTCCCTTaGGGGACCCTATACTGCTTA +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSILPLP*GTLYCL
Trigger: TAAGCAGTATAGGGTCCCTCAAGGGAGGGGGAGGAT...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR TCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGTGGGGTCATCGAGTTaGACATGGCGTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAVGSSS*TWRLRG
Trigger: TCCTCTGAGACGCCATGTTCAACTCGATGACCCCAC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR TCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGCACTGGCCCTCCGGGTaGCCCCTGCATTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWHWPSG*PLHWGC
Trigger: ACAACCCCAATGCAGGGGTCACCCGGAGGGCCAGTG...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTTTGTGCCTCCCACTTTaGGAGGCCCATAGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAALCLPL*EAHSKW
Trigger: CCACTTGCTATGGGCCTCTCAAAGTGGGAGGCACAA...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTTCGCTGTTGATGTGGTaGACCAGCTGCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAASLLMW*TSCSWE
Trigger: CTCCCAAGAGCAGCTGGTGCACCACATCAACAGCGA...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGGGCCATCCCCACGGTaGCGTTTGGTCACATGGGCG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWGPSPR*RLVTWA
Trigger: CGCCCATGTGACCAAACGGCACCGTGGGGATGGCCC...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTAGAGGTCTTCAGTGCTaGCCCCTGCATTGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAARGLQC*PLHCQS
Trigger: TGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCT...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGAGTGGACAGACCAGTaGCAGCAATGCAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSEWTDQ*QQCKVP
Trigger: AGGGACCTTGCATTGCTGGCACTGGTCTGTCCACTC...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTCTCTCTCCAGCCGCTaGCGCGCCGCCGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCSLSSR*RAAALP
Trigger: GGGAAGAGCGGCGGCGCGCCAGCGGCTGGAGAGAGA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATGGCTGGAGTCTGGGCTaGGGGGTGTGCGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHGWSLG*GVCGGE
Trigger: CTCCCCACCGCACACCCCCCAGCCCAGACTCCAGCC...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCATGGGGACCACAAGGCTaGACCCCAAAGGAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAWGPQG*TPKEGE
Trigger: CTCGCCTTCCTTTGGGGTCCAGCCTTGTGGTCCCCA...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGGGAGTCAAATTCCTaGCTGCAGCCATCCCAACGG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSWESNS*LQPSQR
Trigger: CCGTTGGGATGGCTGCAGCCAGGAATTTGACTCCCA...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTCCGATTCTGGTGCTTaGCTCGGTCACTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSSDSGA*LGHWHC
Trigger: GCAATGCCAGTGACCGAGCCAAGCACCAGAATCGGA...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGAATGGGTCCGATTCTaGTGCTTGGCTCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAEWVRF*CLARSL
Trigger: CAGTGACCGAGCCAAGCACCAGAATCGGACCCATTC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCGAATGGGTCCGATTCTaGTGCTTGGCTCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSEWVRF*CLARSL
Trigger: CAGTGACCGAGCCAAGCACCAGAATCGGACCCATTC...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGCTGGGCCCCAGGGCTTaGCTGTGGCTTCATGGCACC +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWLGPRA*LWLHGT
Trigger: GGTGCCATGAAGCCACAGCCAAGCCCTGGGGCCCAG...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGCGTTCAAGAGAGACTaGGGGGCCCACGCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHAFKRD*GAHAAG
Trigger: TCCCGCCGCGTGGGCCCCCCAGTCTCTCTTGAACGC...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGGTTGGGGCCATAGTTaGTGGGTGGACCAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAGWGHS*WVDQAQ
Trigger: TTGGGCCTGGTCCACCCACCAACTATGGCCCCAACC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGGGATATGAGGCCTGCTaGGGACAGGGGTTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGGYEAC*GQGLGP
Trigger: TGGCCCCAACCCCTGTCCCCAGCAGGCCTCATATCC...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTTGGGCACCCCTGTTCTaGCTTGACTTGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAWAPLF*LDLHLS
Trigger: GGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCA...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAACCACCCCCTCTGGCTaGAGCATATCTTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTATTPSG*SISCPK
Trigger: CTTCGGGCAAGATATGCTTCAGCCAGAGGGGGTGGT...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATCACTGGGGTGGGCATTaGGGCAGGGTGCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHHWGGH*GRVPVL
Trigger: CAGGACTGGCACCCTGCCTCAATGCCCACCCCAGTG...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGCTGCCCACCTCAGGATaGCCACAGCTGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGLPTSG*PQLGFV
Trigger: CACAAACCCCAGCTGTGGTCATCCTGAGGTGGGCAG...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGGGTGCCGGGCTTATTaGACCCCCAGGACCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLGCRAY*TPRTPR
Trigger: CCTGGGGGTCCTGGGGGTGCAATAAGCCCGGCACCC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR GCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGGGAGTGGTCACTGCTaGAGGATGACTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWGSGHC*RMTGPQ
Trigger: CTGGGGCCCAGTCATCCTGCAGCAGTGACCACTCCC...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATCCGGGGAGTGGTCACTaGTGCAGGATGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHPGSGH*CRMTGP
Trigger: GGGCCCAGTCATCCTGCAGCAGTGACCACTCCCCGG...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCATGGAGAGGTCTTCAGTaGTGCCCCCTGCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAWRGLQ*CPLHCQ
Trigger: CTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCA...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTCCATAAGGCTCAGCTaGTGCCCCTTCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGSIRLS*CPFRSP
Trigger: GGGGGACCTGAAGGGGCAGCAGCTGAGCCTTATGGA...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGTAAGACACTCATGTTaGCCACAGCCATGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAVRHSC*PQPCWG
Trigger: CCCCCAACATGGCTGTGGGCAACATGAGTGTCTTAC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGCCCTGGGGCATCTTGTaGATGGGACTGCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWPWGIL*MGLQLP
Trigger: GGGGAGCTGCAGTCCCATGCACAAGATGCCCCAGGG...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTCCAGAGATGGGCTCATaGTGCCAATGGAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAPEMGS*CQWRDD
Trigger: GTCATCTCTCCATTGGCACCATGAGCCCATCTCTGG...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGGGAATCCCAGAGATaGGCTCATGGTGCCAATGGA +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSWESQR*AHGANG
Trigger: TCCATTGGCACCATGAGCCCATCTCTGGGATTCCCA...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATCGCGGCGGGACACAGTaGTACCGGTGTGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHRGGTQ*YRCGTS
Trigger: GCTTGTCCCACACCGGTACCACTGTGTCCCGCCGCG...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTAAGTACCACCCCCTCTaGCTGAAGCATATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAKYHPL*LKHILP
Trigger: GGGCAAGATATGCTTCAGCCAGAGGGGGTGGTACTT...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCACTATCCGATCCAGGCTaGATGCTGCAGTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTALSDPG*MLQWAK
Trigger: CTTCGCCCACTGCAGCATCCAGCCTGGATCGGATAG...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTGGGGCCATAGTTGGTaGGTGGACCAGGCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGWGHSW*VDQAQE
Trigger: CTCTTGGGCCTGGTCCACCCACCAACTATGGCCCCA...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGGGGCATCTTGTGCATaGGACTGCAGCTCCCCCAAT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAGASCA*DCSSPN
Trigger: ATTGGGGGAGCTGCAGTCCCATGCACAAGATGCCCC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGTACGAGGGAGCTGGGTaGGGTGCGGATAACCGTCTG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWYEGAG*GADNRL
Trigger: CAGACGGTTATCCGCACCTCACCCAGCTCCCTCGTA...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGGTCACTGGCATTGCTaGAGGCTTTACTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAGHWHC*RLYCSP
Trigger: AGGGCTGCAGTAAAGCCTTCAGCAATGCCAGTGACC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTCTGCTTTCCTCCCTaGTGGGACCTCCTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWVCFPP*WDLLPA
Trigger: AGCGGGAAGGAGGTCCCATCAGGGAGGAAAGCAGAC...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCAAGGCCTGGGTTCTaGAGGAAGATAATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAARPGF*RKIIRG
Trigger: CCCCCTGATTATCTTCCTTCAGAACCCAGGCCTTGC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGGTGGGATAGGAACCTaGCTTGTGATTGGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAGGIGT*LVIGQV
Trigger: AACTTGCCCAATCACAAGTCAGGTTCCTATCCCACC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGGGCCATCCCCACGGTaGCGTTTGGTCACATGGGCG +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLGPSPR*RLVTWA
Trigger: CGCCCATGTGACCAAACGGCACCGTGGGGATGGCCC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCCGGGGAGTGGTCACTaGTGCAGGATGACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCPGSGH*CRMTGP
Trigger: GGGCCCAGTCATCCTGCAGCAGTGACCACTCCCCGG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGTCTGTATTGGCTaGACTCCCTGCCGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGTVCIG*TPCRGV
Trigger: CACTCCCCGGCAGGGAGTGCAGCCAATACAGACAGT...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGAGTGGACAGACCAGTaGCAGCAATGCAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAEWTDQ*QQCKVP
Trigger: AGGGACCTTGCATTGCTGGCACTGGTCTGTCCACTC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTGCTGCTGGAGCTGCTaGTGCGGCGTTCAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGCCWSC*CGVQER
Trigger: TCTCTCTTGAACGCCGCAGCAGCAGCTCCAGCAGCA...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGGGGTATGTCCAGAGCTaGCCCGCTGATCATGGGAAG +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGGYVQS*PADHGK
Trigger: CTTCCCATGATCAGCGGGGCAGCTCTGGACATACCC...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGTCCCTCTTGCCGTTCTaGAGGATGAGGCGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWSLLPF*RMRRGS
Trigger: GCTACCCCGCCTCATCCTCCAGAACGGCAAGAGGGA...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGGCTCATGGTGCCAATaGAGAGATGACCGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAGSWCQ*RDDRRS
Trigger: GCTCCTACGGTCATCTCTCCATTGGCACCATGAGCC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCCCCGGGCAGAGTCATaGGGACCACAAGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHPRAES*GPQGWT
Trigger: GGTCCAGCCTTGTGGTCCCCATGACTCTGCCCGGGG...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAAGCTCAGACTTCAGCTaGCAAGTTGGGAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTASSDFS*QVGKGP
Trigger: GGGACCCTTCCCAACTTGCCAGCTGAAGTCTGAGCT...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGATCCTGTATGCCTGTaGAGTTGGGGCTGGACATAT +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAADPVCL*SWGWTY
Trigger: ATATGTCCAGCCCCAACTCCACAGGCATACAGGATC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGCAAGGCGGCGAAGAGTaGACAGACCAGTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGQGGEE*TDQCQQ
Trigger: TTGCTGGCACTGGTCTGTCCACTCTTCGCCGCCTTG...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTTCTCCAAGGAGGCATaGGAAGACCACCTATCCGAT +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSFSKEA*EDHLSD
Trigger: ATCGGATAGGTGGTCTTCCCATGCCTCCTTGGAGAA...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATCTCCCCCTGCCACAGTaGGTGGGGTATGGACACAGC +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHLPLPQ*VGYGHS
Trigger: GCTGTGTCCATACCCCACCCACTGTGGCAGGGGGAG...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGGACCACTGCCCACCATaGAGGTCCCAACTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGDHCPP*RSQLLA
Trigger: AGCCAGAAGTTGGGACCTCCATGGTGGGCAGTGGTC...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGTGGGGCCATAGTTGGTaGGTGGACCAGGCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWWGHSW*VDQAQE
Trigger: CTCTTGGGCCTGGTCCACCCACCAACTATGGCCCCA...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATAGGGTGCCAGTCCTGTaGAGTCAGACCCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHRVPVL*SQTPLG
Trigger: GCCCAGTGGGGTCTGACTCCACAGGACTGGCACCCT...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAATAGCAAGTGGGCAATaGGGGCAGAAGTCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAIASGQ*GQKSRW
Trigger: CCACCTCGACTTCTGCCCCCATTGCCCACTTGCTAT...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGGAGGCCCATAGCAAGTaGGCAATGGGGGCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGEAHSK*AMGAEV
Trigger: GACTTCTGCCCCCATTGCCCACTTGCTATGGGCCTC...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGGGCCCAGAGGGAGGTaGGGTATGTCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLGPRGR*GMSRAA
Trigger: GGCAGCTCTGGACATACCCCACCTCCCTCTGGGCCC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGACAAGCTGGGCAGTTTaGGACCCCGGGTCCCTATTG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWTSWAV*DPGSLL
Trigger: CAATAGGGACCCGGGGTCTCAAACTGCCCAGCTTGT...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATCTGCCCACCTCAGGATaGCCACAGCTGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHLPTSG*PQLGFV
Trigger: CACAAACCCCAGCTGTGGTCATCCTGAGGTGGGCAG...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCCAGAGCTGCCCCGCTaGTCATGGGAAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCPELPR*SWEGGG
Trigger: TCCTCCTCCTTCCCATGATCAGCGGGGCAGCTCTGG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGCGATCTGTGATGGATaGGATTCCCTACTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAAICDG*DSLLFR
Trigger: CCTAAAGAGTAGGGAATCTCATCCATCACAGATCGC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGAAGCAAGAGAAGGGGTaGCGGGCTTATTGCACCCCC +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWKQEKG*RAYCTP
Trigger: GGGGGTGCAATAAGCCCGGCACCCCTTCTCTTGCTT...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR GCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTCTGTATAGCGTTTGGTaGAGCCAGGGAGCTTACATA +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAALYSVW*SQGAYI
Trigger: TATGTAAGCTCCCTGGCTGCACCAAACGCTATACAG...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGGGAGTGGTCACTGCTaGAGGATGACTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCGSGHC*RMTGPQ
Trigger: CTGGGGCCCAGTCATCCTGCAGCAGTGACCACTCCC...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATCCGATCCAGGCTGGATaGTGCAGTGGGCGAAGTACC +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHPIQAG*CSGRST
Trigger: GGTACTTCGCCCACTGCAGCATCCAGCCTGGATCGG...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGACCCCCTCCTAGCCTaGCCACCTCAGGATGACCAC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLDPLLA*PPQDDH
Trigger: GTGGTCATCCTGAGGTGGGCAGGCTAGGAGGGGGTC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTTCTTGTGCATGGGACTaGAGCTCCCCCAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: APSPYLPSLGHLVHGTAASCAWD*SSPNFS
Trigger: AGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGA...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTCCCTGGGGCATCTTGTaGATGGGACTGCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLPWGIL*MGLQLP
Trigger: GGGGAGCTGCAGTCCCATGCACAAGATGCCCCAGGG...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGTGATTCATCTGGGCTaGGAATCCCAGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAVIHLG*ESQRWA
Trigger: AGCCCATCTCTGGGATTCCCAGCCCAGATGAATCAC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATCTTCAGCTGGCAAGTTaGGAAGGGTCCCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHLQLAS*EGSPGL
Trigger: CAGTCCCGGGGACCCTTCCCAACTTGCCAGCTGAAG...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTCCCCACGGTGCCGTTTaGTCACATGGGCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLPHGAV*SHGRQD
Trigger: GTCCTGACGCCCATGTGACCAAACGGCACCGTGGGG...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTTGGCTGTGGCTTCATaGCACCCTCTGGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGLAVAS*HPLAQS
Trigger: TGACTGTGCCAGAGGGTGCCATGAAGCCACAGCCAA...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTCTCCCTGCCGGGGAGTaGTCACTGCTGCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLLPAGE*SLLQDD
Trigger: GTCATCCTGCAGCAGTGACCACTCCCCGGCAGGGAG...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTCCCCCTGCCACAGTaGGTGGGGTATGGACACAGC +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHLPLPQ*VGYGHS
Trigger: GCTGTGTCCATACCCCACCCACTGTGGCAGGGGGAG...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGAAGAGGCAGAGAGCCTaGACCCCTCGCTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWKRQRA*TPRSIR
Trigger: CCTTATGGAGCGAGGGGTCCAGGCTCTCTGCCTCTT...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGTTGGGGCCATAGTTaGTGGGTGGACCAGGCCCAA +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHGWGHS*WVDQAQ
Trigger: TTGGGCCTGGTCCACCCACCAACTATGGCCCCAACC...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCACCCATGTTTCTTGGGTaGGGTCAGGATATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAPMFLG*GQDMRP
Trigger: AGGCCTCATATCCTGACCCCACCCAAGAAACATGGG...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATAGGGTGCCAGTCCTGTaGAGTCAGACCCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHRVPVL*SQTPLG
Trigger: GCCCAGTGGGGTCTGACTCCACAGGACTGGCACCCT...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGCCCTGTGGAATGGGTaGGGGAATCAAAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWALWNG*GNQSPG
Trigger: GCCTGGACTTTGATTCCCCCACCCATTCCACAGGGC...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTCCATATGTGTTCACTaGAGCTTTAGCACGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSSICVH*SFSTAW
Trigger: CCAAGCCGTGCTAAAGCTCCAGTGAACACATATGGA...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGGCATCCGACAGAGGTaGGATGGACAGTGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLGIRQR*DGQCPL
Trigger: AAGCGGGCACTGTCCATCTCACCTCTGTCGGATGCC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTAAGGGTCCCCGGGACTaGGGATGTGGGATCATCCCA +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLKGPRD*GCGIIP
Trigger: TGGGATGATCCCACATCCTCAGTCCCGGGGACCCTT...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATACAAGCTGGGCAGTTTaGGACCCCGGGTCCCTATTG +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHTSWAV*DPGSLL
Trigger: CAATAGGGACCCGGGGTCTCAAACTGCCCAGCTTGT...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGGTGGGATAGGAACCTaGCTTGTGATTGGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAGGIGT*LVIGQV
Trigger: AACTTGCCCAATCACAAGTCAGGTTCCTATCCCACC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCTGCCCACCTCAGGATaGCCACAGCTGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCLPTSG*PQLGFV
Trigger: CACAAACCCCAGCTGTGGTCATCCTGAGGTGGGCAG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGTCGCTGTTGATGTGGTaGACCAGCTGCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWSLLMW*TSCSWE
Trigger: CTCCCAAGAGCAGCTGGTGCACCACATCAACAGCGA...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTATTGGCTGCACTCCCTaGCGGGGAGTGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCIGCTP*RGVVTA
Trigger: AGCAGTGACCACTCCCCGGCAGGGAGTGCAGCCAAT...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATACTGTCTGTATTGGCTaGACTCCCTGCCGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHTVCIG*TPCRGV
Trigger: CACTCCCCGGCAGGGAGTGCAGCCAATACAGACAGT...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATAGGGGTTCAGACCACTaGCCACCATGGAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHRGSDH*PPWRSQ
Trigger: TTGGGACCTCCATGGTGGGCAGTGGTCTGAACCCCT...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCCATAGCTACTGATTaGTGGTGGGGTCATCGAGTT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAAIATD*WWGHRV
Trigger: AACTCGATGACCCCACCACCAATCAGTAGCTATGGC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCCCGGGACTGAGGATGTaGGATCATCCCACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPPGLRM*DHPTPG
Trigger: GCCCGGGGTGGGATGATCCCACATCCTCAGTCCCGG...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCGGGACTGAGGATGTaGGATCATCCCACCCCGGGC +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNPGLRM*DHPTPG
Trigger: GCCCGGGGTGGGATGATCCCACATCCTCAGTCCCGG...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGTGCTCGCTGTTGATGTaGTGCACCAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWCSLLM*CTSCSW
Trigger: CCAAGAGCAGCTGGTGCACCACATCAACAGCGAGCA...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCACTGTAGAAATGGATaGTGCCCGAGGCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCHCRNG*CPRQGA
Trigger: GGCCCCCTGCCTCGGGCACCATCCATTTCTACAGTG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCCTGGGCCCCAGGGCTTaGCTGTGGCTTCATGGCACC +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPLGPRA*LWLHGT
Trigger: GGTGCCATGAAGCCACAGCCAAGCCCTGGGGCCCAG...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATCAAGGCGGCGAAGAGTaGACAGACCAGTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHQGGEE*TDQCQQ
Trigger: TTGCTGGCACTGGTCTGTCCACTCTTCGCCGCCTTG...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGACAGTGGTACCGGTGTaGGACAAGCTGGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWTVVPV*DKLGSL
Trigger: CAAACTGCCCAGCTTGTCCCACACCGGTACCACTGT...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAATTGGGGTTGTATCCTaGATACTCGGCTCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAIGVVS*ILGSAS
Trigger: AGAAGCCGAGCCGAGTATCCAGGATACAACCCCAAT...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCCTCTGGACTCTAGCTaGAGCAGGACGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHPLDSS*SRTVSS
Trigger: GCTGCTGACCGTCCTGCTCCAGCTAGAGTCCAGAGG...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATTGGGGCCATAGTTGGTaGGTGGACCAGGCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHWGHSW*VDQAQE
Trigger: CTCTTGGGCCTGGTCCACCCACCAACTATGGCCCCA...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATTTCCACCTAGAGCCTTaGGGCCTGGGTACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHFHLEP*GLGTAQ
Trigger: CTGGGCTGTACCCAGGCCCCAAGGCTCTAGGTGGAA...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTTCCACCTAGAGCCTTaGGGCCTGGGTACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCFHLEP*GLGTAQ
Trigger: CTGGGCTGTACCCAGGCCCCAAGGCTCTAGGTGGAA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCATGTGATTGGGCAAGTTaGGTCCAAAGCCAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTACDWAS*VQSQVH
Trigger: ATGGACCTGGCTTTGGACCCAACTTGCCCAATCACA...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGGGCATGGTGAAGGGGTaGGATAGGAACCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGGMVKG*DRNLTC
Trigger: ACAAGTCAGGTTCCTATCCCACCCCTTCACCATGCC...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGATAGCAAGTGGGCAATaGGGGCAGAAGTCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWIASGQ*GQKSRW
Trigger: CCACCTCGACTTCTGCCCCCATTGCCCACTTGCTAT...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGCAGGATGACCACAGCTaGGGTTTGTGCCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWQDDHS*GLCLPL
Trigger: AAGTGGGAGGCACAAACCCCAGCTGTGGTCATCCTG...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGCCCAGAGGGAGGTaGGGTATGTCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPGPRGR*GMSRAA
Trigger: GGCAGCTCTGGACATACCCCACCTCCCTCTGGGCCC...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACGGGCCCAGAGGGAGGTaGGGTATGTCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNGPRGR*GMSRAA
Trigger: GGCAGCTCTGGACATACCCCACCTCCCTCTGGGCCC...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGAGAAGAAAAGAGTaGGCCTCTGTCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHGRRKE*ASVWAL
Trigger: CAGCGCCCAGACAGAGGCCCACTCTTTTCTTCTCCC...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543426.5
CDS-3UTR TCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGTCACTGGCATTGCTaGAGGCTTTACTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHGHWHC*RLYCSP
Trigger: AGGGCTGCAGTAAAGCCTTCAGCAATGCCAGTGACC...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTCCTATTGGCCGGAGTTaGTGTAGCTGGTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLPIGRS*CSWSSL
Trigger: CAGGCTGGACCAGCTACATCAACTCCGGCCAATAGG...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCACTGGCCCTCCGGGTaGCCCCTGCATTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIHWPSG*PLHWGC
Trigger: ACAACCCCAATGCAGGGGTCACCCGGAGGGCCAGTG...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTGGGTATAGGGGCCTaGCTGGAGATATTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHLGIGA*LEILGR
Trigger: CCTCCCCAATATCTCCAGTCAGGCCCCTATACCCAG...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTACACAAGCTGAGCCTTaGGCTGCCCTGTGGAATGGG +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLTQAEP*AALWNG
Trigger: CCCATTCCACAGGGCAGCTCAAGGCTCAGCTTGTGT...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTGCTGCTGCCCTATGTaGAGCCCTATTTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCCCCPM*SPICPH
Trigger: GTGGGGGCAAATAGGGCTTCACATAGGGCAGCAGCA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTGTAGAAATGGATGGTaGCCGAGGCAGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCCRNGW*PRQGAI
Trigger: GATGGCCCCCTGCCTCGGGCACCATCCATTTCTACA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATTGGAGAGGTCTTCAGTaGTGCCCCCTGCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHWRGLQ*CPLHCQ
Trigger: CTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCA...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATGACCAGTGCCAGCAATaGAAGGTCCCTCGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHDQCQQ*KVPRPS
Trigger: GCTTGGACGAGGGACCTTGCATTGCTGGCACTGGTC...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTGCTGGAGCTGCTGCTaGGGCGTTCAAGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCCWSCC*GVQERL
Trigger: CAGTCTCTCTTGAACGCCGCAGCAGCAGCTCCAGCA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTGCTGCTGGAGCTGCTaGTGCGGCGTTCAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCCCWSC*CGVQER
Trigger: TCTCTCTTGAACGCCGCAGCAGCAGCTCCAGCAGCA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTATCCAGGCTGGATGCTaGAGTGGGCGAAGTACCACC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLIQAGC*SGRSTT
Trigger: GGTGGTACTTCGCCCACTGCAGCATCCAGCCTGGAT...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATATCCAGGCTGGATGCTaGAGTGGGCGAAGTACCACC +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHIQAGC*SGRSTT
Trigger: GGTGGTACTTCGCCCACTGCAGCATCCAGCCTGGAT...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGACCCCCTCCTAGCCTaGCCACCTCAGGATGACCAC +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPDPLLA*PPQDDH
Trigger: GTGGTCATCCTGAGGTGGGCAGGCTAGGAGGGGGTC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGGGTATGTCCAGAGCTaGCCCGCTGATCATGGGAAG +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLGYVQS*PADHGK
Trigger: CTTCCCATGATCAGCGGGGCAGCTCTGGACATACCC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTACTGATTGGTGGTaGGGTCATCGAGTTGAACAT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAATDWW*GHRVEH
Trigger: ATGTTCAACTCGATGACCCCACCACCAATCAGTAGC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGGCCATAGCTACTGATTaGTGGTGGGGTCATCGAGTT +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGAIATD*WWGHRV
Trigger: AACTCGATGACCCCACCACCAATCAGTAGCTATGGC...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTATGAGGTTAGCTTGGTaGCAGAAGGGCGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLMRLAW*QKGGPD
Trigger: GTCTGGCCCGCCCTTCTGCCACCAAGCTAACCTCAT...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTCCGACAGAGGTGAGATaGACAGTGCCCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLPTEVR*TVPASW
Trigger: CCAAGAAGCGGGCACTGTCCATCTCACCTCTGTCGG...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGCCAGAGATGGGCTCATaGTGCCAATGGAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWPEMGS*CQWRDD
Trigger: GTCATCTCTCCATTGGCACCATGAGCCCATCTCTGG...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTGATTCATCTGGGCTaGGAATCCCAGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWVIHLG*ESQRWA
Trigger: AGCCCATCTCTGGGATTCCCAGCCCAGATGAATCAC...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGCTGTGGAGTTGGGGCTaGACATATCACCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWLWSWG*TYHLPR
Trigger: CCTTGGAAGGTGATATGTCCAGCCCCAACTCCACAG...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATTGGGAGTCAAATTCCTaGCTGCAGCCATCCCAACGG +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHWESNS*LQPSQR
Trigger: CCGTTGGGATGGCTGCAGCCAGGAATTTGACTCCCA...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTCCCAGGGCTTGGCTGTaGCTTCATGGCACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPPRAWL*LHGTLW
Trigger: CCAGAGGGTGCCATGAAGCCACAGCCAAGCCCTGGG...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCCCTCGTCCAAGCTaGAGAGGTCTTCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLVPRPS*RGLQCC
Trigger: GCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGAC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCGCGTTCAAGAGAGACTaGGGGGCCCACGCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPAFKRD*GAHAAG
Trigger: TCCCGCCGCGTGGGCCCCCCAGTCTCTCTTGAACGC...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCTATCCGATCCAGGCTaGATGCTGCAGTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCLSDPG*MLQWAK
Trigger: CTTCGCCCACTGCAGCATCCAGCCTGGATCGGATAG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGATTGGGGTTGTATCCTaGATACTCGGCTCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGIGVVS*ILGSAS
Trigger: AGAAGCCGAGCCGAGTATCCAGGATACAACCCCAAT...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGGGTACAGCCCAGAGTaGGAAGGGAACTCACCCCAT +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCGYSPE*EGNSPH
Trigger: ATGGGGTGAGTTCCCTTCCCACTCTGGGCTGTACCC...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTAGGGTGCCAGTCCTGTaGAGTCAGACCCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPRVPVL*SQTPLG
Trigger: GCCCAGTGGGGTCTGACTCCACAGGACTGGCACCCT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGCCCTGTGGAATGGGTaGGGGAATCAAAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLALWNG*GNQSPG
Trigger: GCCTGGACTTTGATTCCCCCACCCATTCCACAGGGC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTAGCTTTAGCACGGCTTaGGCTAACCTGGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCSFSTA*ANLGTP
Trigger: GGGGGTTCCCAGGTTAGCCCAAGCCGTGCTAAAGCT...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAAACCTGACTTGTGATTaGGCAAGTTGGGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTANLTCD*ASWVQS
Trigger: GCTTTGGACCCAACTTGCCCAATCACAAGTCAGGTT...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATGAGGCCCATAGCAAGTaGGCAATGGGGGCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHEAHSK*AMGAEV
Trigger: GACTTCTGCCCCCATTGCCCACTTGCTATGGGCCTC...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGAGGCCCATAGCAAGTaGGCAATGGGGGCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCEAHSK*AMGAEV
Trigger: GACTTCTGCCCCCATTGCCCACTTGCTATGGGCCTC...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGGGGCATCTTGTGCATaGGACTGCAGCTCCCCCAAT +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCGASCA*DCSSPN
Trigger: ATTGGGGGAGCTGCAGTCCCATGCACAAGATGCCCC...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGCATCCGACAGAGGTaGGATGGACAGTGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPGIRQR*DGQCPL
Trigger: AAGCGGGCACTGTCCATCTCACCTCTGTCGGATGCC...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCTACGAGGGAGCTGGGTaGGGTGCGGATAACCGTCTG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPYEGAG*GADNRL
Trigger: CAGACGGTTATCCGCACCTCACCCAGCTCCCTCGTA...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGTCTGCTTTCCTCCCTaGTGGGACCTCCTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPVCFPP*WDLLPA
Trigger: AGCGGGAAGGAGGTCCCATCAGGGAGGAAAGCAGAC...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATTTGTGCCTCCCACTTTaGGAGGCCCATAGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHLCLPL*EAHSKW
Trigger: CCACTTGCTATGGGCCTCTCAAAGTGGGAGGCACAA...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACAGAGTGGGCCCTCGGTaGAGCTGTTGGTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNRVGPR*SCWSLW
Trigger: CCAGAGAGACCAACAGCTGCACCGAGGGCCCACTCT...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR GCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGAGATGGGCTCATGGTaGCAATGGAGAGATGACCGT +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHEMGSW*QWRDDR
Trigger: ACGGTCATCTCTCCATTGGCACCATGAGCCCATCTC...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTCTCGCCAGTGTGTCTaGGCATGTGAACCACCAGCA +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCSRQCV*ACEPPA
Trigger: TGCTGGTGGTTCACATGCGCAGACACACTGGCGAGA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATTCTCGCCAGTGTGTCTaGGCATGTGAACCACCAGCA +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHSRQCV*ACEPPA
Trigger: TGCTGGTGGTTCACATGCGCAGACACACTGGCGAGA...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTGGGCGTCAGGACCATaGACTGTCTTGACATGTTTT +
Preference number: 4 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGWASGP*TVLTCF
Trigger: AAAACATGTCAAGACAGTGCATGGTCCTGACGCCCA...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTATTGGCTGCACTCCCTaGCGGGGAGTGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPIGCTP*RGVVTA
Trigger: AGCAGTGACCACTCCCCGGCAGGGAGTGCAGCCAAT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCCCTCCGGGTGACCCCTaGATTGGGGTTGTATCCTGG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPPPGDP*IGVVSW
Trigger: CCAGGATACAACCCCAATGCAGGGGTCACCCGGAGG...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGTTCTGTCCTCCCCCTaGCACAGTGGGTGGGGTATG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPVLSSP*HSGWGM
Trigger: CATACCCCACCCACTGTGGCAGGGGGAGGACAGAAC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCGACCCCCTCCTAGCCTaGCCACCTCAGGATGACCAC +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIDPLLA*PPQDDH
Trigger: GTGGTCATCCTGAGGTGGGCAGGCTAGGAGGGGGTC...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTTCTCAGAGGAGGGTGTaGGGACACTCTGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPSQRRV*GHSVWA
Trigger: CGCCCAGACAGAGTGTCCCCACACCCTCCTCTGAGA...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCCCTCGGTGCAGCTGTTaGTCTCTCTGGCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPPRCSC*SLWLAH
Trigger: ATGGGCCAGCCAGAGAGACCAACAGCTGCACCGAGG...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATACCGTAGGAGCCTCCTaGAGATGTGCATCGCGAGTT +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHTVGAS*RCASRV
Trigger: AACTCGCGATGCACATCTCCAGGAGGCTCCTACGGT...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGGCTCATGGTGCCAATaGAGAGATGACCGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCGSWCQ*RDDRRS
Trigger: GCTCCTACGGTCATCTCTCCATTGGCACCATGAGCC...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCCCCGGGCAGAGTCATaGGGACCACAAGGCTGGACC +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPPRAES*GPQGWT
Trigger: GGTCCAGCCTTGTGGTCCCCATGACTCTGCCCGGGG...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCCTTCAGCTGGCAAGTTaGGAAGGGTCCCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPLQLAS*EGSPGL
Trigger: CAGTCCCGGGGACCCTTCCCAACTTGCCAGCTGAAG...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTAGCTCAGACTTCAGCTaGCAAGTTGGGAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCSSDFS*QVGKGP
Trigger: GGGACCCTTCCCAACTTGCCAGCTGAAGTCTGAGCT...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTATGCCTGTGGAGTTaGGGCTGGACATATCACCTT +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWVCLWS*GWTYHL
Trigger: AAGGTGATATGTCCAGCCCCAACTCCACAGGCATAC...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTTGCCGTTTGGTCACATaGGCGTCAGGACCATGCACT +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLCRLVT*ASGPCT
Trigger: AGTGCATGGTCCTGACGCCCATGTGACCAAACGGCA...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCCCACGGTGCCGTTTaGTCACATGGGCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIPHGAV*SHGRQD
Trigger: GTCCTGACGCCCATGTGACCAAACGGCACCGTGGGG...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTCACTGTAGAAATGGATaGTGCCCGAGGCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPHCRNG*CPRQGA
Trigger: GGCCCCCTGCCTCGGGCACCATCCATTTCTACAGTG...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGATTGGGGTTGTATCCTaGATACTCGGCTCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWIGVVS*ILGSAS
Trigger: AGAAGCCGAGCCGAGTATCCAGGATACAACCCCAAT...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCTCTGGACTCTAGCTaGAGCAGGACGGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNPLDSS*SRTVSS
Trigger: GCTGCTGACCGTCCTGCTCCAGCTAGAGTCCAGAGG...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATAGGCTCTTGAACCTCTaGACTCTAGCTGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHRLLNL*TLAGAG
Trigger: TCCTGCTCCAGCTAGAGTCCAGAGGTTCAAGAGCCT...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCACAGAGTATCAGTAGGTaGGAAGTCCATATAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAQSISR*EVHIGV
Trigger: AACCCCTATATGGACTTCCCACCTACTGATACTCTG...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACGGAGTCAGACCCCACTaGGCACCCCTGTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNGVRPH*APLFWL
Trigger: AAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCC...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCCCTGACTGGAGATATTaGGGAGGAGAGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPPDWRY*GGEGWG
Trigger: CCCCCAGCCCTCTCCTCCCCAATATCTCCAGTCAGG...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATAGCTGCCCTGTGGAATaGGTGGGGGAATCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHSCPVE*VGESKS
Trigger: GGACTTTGATTCCCCCACCCATTCCACAGGGCAGCT...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGCATGGTGAAGGGGTaGGATAGGAACCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHGMVKG*DRNLTC
Trigger: ACAAGTCAGGTTCCTATCCCACCCCTTCACCATGCC...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCTGCCCACAGCCATGTTaGGGGGCCCAGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPCPQPC*GAQREV
Trigger: CACCTCCCTCTGGGCCCCCCAACATGGCTGTGGGCA...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCATACCTCCCATCCCTaGGGCATCTTGTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHHTSHP*GILCMG
Trigger: TCCCATGCACAAGATGCCCCAGGGATGGGAGGTATG...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGCTCGCCATAGCTACTaGTTGGTGGTGGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPARHSY*LVVGSS
Trigger: CGATGACCCCACCACCAATCAGTAGCTATGGCGAGC...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR TCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTACCACCCCCTCTGGCTaGAGCATATCTTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPTTPSG*SISCPK
Trigger: CTTCGGGCAAGATATGCTTCAGCCAGAGGGGGTGGT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCCTGGGTATAGGGGCCTaGCTGGAGATATTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPLGIGA*LEILGR
Trigger: CCTCCCCAATATCTCCAGTCAGGCCCCTATACCCAG...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGAGATGGGCTCATGGTaGCAATGGAGAGATGACCGT +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLEMGSW*QWRDDR
Trigger: ACGGTCATCTCTCCATTGGCACCATGAGCCCATCTC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTAGTCAAATTCCTGGCTaGAGCCATCCCAACGGCAGT +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCSQIPG*SHPNGS
Trigger: ACTGCCGTTGGGATGGCTGCAGCCAGGAATTTGACT...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATATGTGGTGCACCAGCTaGTCTTGGGAGTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHMWCTS*SWESNS
Trigger: GGAATTTGACTCCCAAGAGCAGCTGGTGCACCACAT...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACTGGGTCCGATTCTGGTaGTTGGCTCGGTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNWVRFW*LARSLA
Trigger: TGCCAGTGACCGAGCCAAGCACCAGAATCGGACCCA...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCATTGGCTGCACTCCCTaGCGGGGAGTGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIIGCTP*RGVVTA
Trigger: AGCAGTGACCACTCCCCGGCAGGGAGTGCAGCCAAT...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTTTCAGTGCTGCCCCCTaGATTGCCAGTCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLFSAAP*IASHFH
Trigger: GTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAA...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTTGGAGAGGTCTTCAGTaGTGCCCCCTGCATTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPWRGLQ*CPLHCQ
Trigger: CTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCA...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCAGGGGTTCAGACCACTaGCCACCATGGAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPRGSDH*PPWRSQ
Trigger: TTGGGACCTCCATGGTGGGCAGTGGTCTGAACCCCT...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCTCCATAAGGCTCAGCTaGTGCCCCTTCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPISIRLS*CPFRSP
Trigger: GGGGGACCTGAAGGGGCAGCAGCTGAGCCTTATGGA...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGGGTATGTCCAGAGCTaGCCCGCTGATCATGGGAAG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPGYVQS*PADHGK
Trigger: CTTCCCATGATCAGCGGGGCAGCTCTGGACATACCC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGTAAGACACTCATGTTaGCCACAGCCATGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCVRHSC*PQPCWG
Trigger: CCCCCAACATGGCTGTGGGCAACATGAGTGTCTTAC...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCCCGACAGAGGTGAGATaGACAGTGCCCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPPTEVR*TVPASW
Trigger: CCAAGAAGCGGGCACTGTCCATCTCACCTCTGTCGG...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATTGGGAATCCCAGAGATaGGCTCATGGTGCCAATGGA +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHWESQR*AHGANG
Trigger: TCCATTGGCACCATGAGCCCATCTCTGGGATTCCCA...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTTGGGAATCCCAGAGATaGGCTCATGGTGCCAATGGA +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLWESQR*AHGANG
Trigger: TCCATTGGCACCATGAGCCCATCTCTGGGATTCCCA...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATGTGATTCATCTGGGCTaGGAATCCCAGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHVIHLG*ESQRWA
Trigger: AGCCCATCTCTGGGATTCCCAGCCCAGATGAATCAC...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCTTCAGCTGGCAAGTTaGGAAGGGTCCCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPILQLAS*EGSPGL
Trigger: CAGTCCCGGGGACCCTTCCCAACTTGCCAGCTGAAG...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTGTGGAGTTGGGGCTaGACATATCACCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHLWSWG*TYHLPR
Trigger: CCTTGGAAGGTGATATGTCCAGCCCCAACTCCACAG...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGTATGCCTGTGGAGTTaGGGCTGGACATATCACCTT +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHVCLWS*GWTYHL
Trigger: AAGGTGATATGTCCAGCCCCAACTCCACAGGCATAC...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGATCCTGTATGCCTGTaGAGTTGGGGCTGGACATAT +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHDPVCL*SWGWTY
Trigger: ATATGTCCAGCCCCAACTCCACAGGCATACAGGATC...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATTGCACCAGCTGCTCTTaGGAGTCAAATTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHCTSCS*ESNSWL
Trigger: CAGCCAGGAATTTGACTCCCAAGAGCAGCTGGTGCA...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTTCCTTCCGCTCCCCGTaGATGTGCTCGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPSFRSP*MCSLLM
Trigger: CATCAACAGCGAGCACATCCACGGGGAGCGGAAGGA...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCTCCTTCCGCTCCCCGTaGATGTGCTCGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPSFRSP*MCSLLM
Trigger: CATCAACAGCGAGCACATCCACGGGGAGCGGAAGGA...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCTTCATGGCACCCTCTaGCACAGTCAGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCLHGTL*HSQSAF
Trigger: GAAAGCAGACTGACTGTGCCAGAGGGTGCCATGAAG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTCATGGCACCCTCTaGCACAGTCAGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHLHGTL*HSQSAF
Trigger: GAAAGCAGACTGACTGTGCCAGAGGGTGCCATGAAG...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACGTCCCTCGTCCAAGCTaGAGAGGTCTTCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNVPRPS*RGLQCC
Trigger: GCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGAC...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCAAGGCGGCGAAGAGTaGACAGACCAGTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNQGGEE*TDQCQQ
Trigger: TTGCTGGCACTGGTCTGTCCACTCTTCGCCGCCTTG...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGACCACTGCCCACCATaGAGGTCCCAACTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPDHCPP*RSQLLA
Trigger: AGCCAGAAGTTGGGACCTCCATGGTGGGCAGTGGTC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTAAGAGGCAGAGAGCCTaGACCCCTCGCTCCATAAGG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPKRQRA*TPRSIR
Trigger: CCTTATGGAGCGAGGGGTCCAGGCTCTCTGCCTCTT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATTCACCCCATGTTTCTTaGGTGGGGTCAGGATATGAG +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHSPHVS*VGSGYE
Trigger: CTCATATCCTGACCCCACCCAAGAAACATGGGGTGA...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGGGTACAGCCCAGAGTaGGAAGGGAACTCACCCCAT +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPGYSPE*EGNSPH
Trigger: ATGGGGTGAGTTCCCTTCCCACTCTGGGCTGTACCC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGTACAGCCCAGAGTaGGAAGGGAACTCACCCCAT +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPGYSPE*EGNSPH
Trigger: ATGGGGTGAGTTCCCTTCCCACTCTGGGCTGTACCC...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCGGAGTCAGACCCCACTaGGCACCCCTGTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIGVRPH*APLFWL
Trigger: AAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCC...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGACTGGAGATATTaGGGAGGAGAGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIPDWRY*GGEGWG
Trigger: CCCCCAGCCCTCTCCTCCCCAATATCTCCAGTCAGG...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCAGCTTTAGCACGGCTTaGGCTAACCTGGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPSFSTA*ANLGTP
Trigger: GGGGGTTCCCAGGTTAGCCCAAGCCGTGCTAAAGCT...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACAGCTTTAGCACGGCTTaGGCTAACCTGGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNSFSTA*ANLGTP
Trigger: GGGGGTTCCCAGGTTAGCCCAAGCCGTGCTAAAGCT...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGGGGCATCTTGTGCATaGGACTGCAGCTCCCCCAAT +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPGASCA*DCSSPN
Trigger: ATTGGGGGAGCTGCAGTCCCATGCACAAGATGCCCC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCGTCTGCTTTCCTCCCTaGTGGGACCTCCTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPVCFPP*WDLLPA
Trigger: AGCGGGAAGGAGGTCCCATCAGGGAGGAAAGCAGAC...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCTGTAGAAATGGATGGTaGCCGAGGCAGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPICRNGW*PRQGAI
Trigger: GATGGCCCCCTGCCTCGGGCACCATCCATTTCTACA...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCGACCAGTGCCAGCAATaGAAGGTCCCTCGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIDQCQQ*KVPRPS
Trigger: GCTTGGACGAGGGACCTTGCATTGCTGGCACTGGTC...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCTCCATAAGGCTCAGCTaGTGCCCCTTCAGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPSIRLS*CPFRSP
Trigger: GGGGGACCTGAAGGGGCAGCAGCTGAGCCTTATGGA...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCAGCTGTTGGTCTCTCTaGCTGGCCCATAACTGTGGG +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPSCWSL*LAHNCG
Trigger: CCCACAGTTATGGGCCAGCCAGAGAGACCAACAGCT...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACACCGTAGGAGCCTCCTaGAGATGTGCATCGCGAGTT +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNTVGAS*RCASRV
Trigger: AACTCGCGATGCACATCTCCAGGAGGCTCCTACGGT...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCTGGGGACCACAAGGCTaGACCCCAAAGGAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPWGPQG*TPKEGE
Trigger: CTCGCCTTCCTTTGGGGTCCAGCCTTGTGGTCCCCA...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTAGCTCAGACTTCAGCTaGCAAGTTGGGAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPSSDFS*QVGKGP
Trigger: GGGACCCTTCCCAACTTGCCAGCTGAAGTCTGAGCT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTTGGGAGTCAAATTCCTaGCTGCAGCCATCCCAACGG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPWESNS*LQPSQR
Trigger: CCGTTGGGATGGCTGCAGCCAGGAATTTGACTCCCA...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACTGCTCGCTGTTGATGTaGTGCACCAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNCSLLM*CTSCSW
Trigger: CCAAGAGCAGCTGGTGCACCACATCAACAGCGAGCA...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGAATGGGTCCGATTCTaGTGCTTGGCTCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPEWVRF*CLARSL
Trigger: CAGTGACCGAGCCAAGCACCAGAATCGGACCCATTC...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCAGGGCTTGGCTGTaGCTTCATGGCACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLPRAWL*LHGTLW
Trigger: CCAGAGGGTGCCATGAAGCCACAGCCAAGCCCTGGG...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCTCCCTGCCGGGGAGTaGTCACTGCTGCAGGATGAC +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLLPAGE*SLLQDD
Trigger: GTCATCCTGCAGCAGTGACCACTCCCCGGCAGGGAG...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTTCTCCAAGGAGGCATaGGAAGACCACCTATCCGAT +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCFSKEA*EDHLSD
Trigger: ATCGGATAGGTGGTCTTCCCATGCCTCCTTGGAGAA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCGGATATGAGGCCTGCTaGGGACAGGGGTTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLGYEAC*GQGLGP
Trigger: TGGCCCCAACCCCTGTCCCCAGCAGGCCTCATATCC...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATTCACCCCATGTTTCTTaGGTGGGGTCAGGATATGAG +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHSPHVS*VGSGYE
Trigger: CTCATATCCTGACCCCACCCAAGAAACATGGGGTGA...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTCACCCCATGTTTCTTaGGTGGGGTCAGGATATGAG +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCSPHVS*VGSGYE
Trigger: CTCATATCCTGACCCCACCCAAGAAACATGGGGTGA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTTGGGCACCCCTGTTCTaGCTTGACTTGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPWAPLF*LDLHLS
Trigger: GGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCA...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCCTGACTGGAGATATTaGGGAGGAGAGGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPPDWRY*GGEGWG
Trigger: CCCCCAGCCCTCTCCTCCCCAATATCTCCAGTCAGG...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTAGCTGCCCTGTGGAATaGGTGGGGGAATCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPSCPVE*VGESKS
Trigger: GGACTTTGATTCCCCCACCCATTCCACAGGGCAGCT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATTCCATATGTGTTCACTaGAGCTTTAGCACGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHSICVH*SFSTAW
Trigger: CCAAGCCGTGCTAAAGCTCCAGTGAACACATATGGA...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTGTGATTGGGCAAGTTaGGTCCAAAGCCAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCCDWAS*VQSQVH
Trigger: ATGGACCTGGCTTTGGACCCAACTTGCCCAATCACA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCCAGGATGACCACAGCTaGGGTTTGTGCCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPQDDHS*GLCLPL
Trigger: AAGTGGGAGGCACAAACCCCAGCTGTGGTCATCCTG...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCGTGGGGTCATCGAGTTaGACATGGCGTCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIVGSSS*TWRLRG
Trigger: TCCTCTGAGACGCCATGTTCAACTCGATGACCCCAC...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR TCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCGGCATCCGACAGAGGTaGGATGGACAGTGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLGIRQR*DGQCPL
Trigger: AAGCGGGCACTGTCCATCTCACCTCTGTCGGATGCC...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCAAGGGTCCCCGGGACTaGGGATGTGGGATCATCCCA +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLKGPRD*GCGIIP
Trigger: TGGGATGATCCCACATCCTCAGTCCCGGGGACCCTT...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCGTAGCTGGTCCAGCCTaGGGTTCTCAAGGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLVAGPA*GSQGGE
Trigger: TTCGCCGCCTTGAGAACCTCAGGCTGGACCAGCTAC...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCCTATTGGCCGGAGTTaGTGTAGCTGGTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPPIGRS*CSWSSL
Trigger: CAGGCTGGACCAGCTACATCAACTCCGGCCAATAGG...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCAGTATAGGCAGAGCTaGTGCTGCTGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPQYRQS*CCWSCC
Trigger: GCAGCAGCTCCAGCAGCATCAGCTCTGCCTATACTG...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTACCCCTGTTCTGGCTTaGCTTGCACTTGTCCATAAT +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCTPVLA*LALVHN
Trigger: ATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGT...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTACCCCTGTTCTGGCTTaGCTTGCACTTGTCCATAAT +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLTPVLA*LALVHN
Trigger: ATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGT...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCACACAAGCTGAGCCTTaGGCTGCCCTGTGGAATGGG +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPTQAEP*AALWNG
Trigger: CCCATTCCACAGGGCAGCTCAAGGCTCAGCTTGTGT...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCTTGTGCCTCCCACTTTaGGAGGCCCATAGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPILCLPL*EAHSKW
Trigger: CCACTTGCTATGGGCCTCTCAAAGTGGGAGGCACAA...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACGAGATGGGCTCATGGTaGCAATGGAGAGATGACCGT +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNEMGSW*QWRDDR
Trigger: ACGGTCATCTCTCCATTGGCACCATGAGCCCATCTC...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCAGTCAAATTCCTGGCTaGAGCCATCCCAACGGCAGT +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPSQIPG*SHPNGS
Trigger: ACTGCCGTTGGGATGGCTGCAGCCAGGAATTTGACT...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTTTCAGTGCTGCCCCCTaGATTGCCAGTCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPFSAAP*IASHFH
Trigger: GTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAA...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCGACCAGTGCCAGCAATaGAAGGTCCCTCGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPDQCQQ*KVPRPS
Trigger: GCTTGGACGAGGGACCTTGCATTGCTGGCACTGGTC...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCGAGTGGACAGACCAGTaGCAGCAATGCAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIEWTDQ*QQCKVP
Trigger: AGGGACCTTGCATTGCTGGCACTGGTCTGTCCACTC...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCAGGGGTTCAGACCACTaGCCACCATGGAGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPRGSDH*PPWRSQ
Trigger: TTGGGACCTCCATGGTGGGCAGTGGTCTGAACCCCT...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTCTTGTGCATGGGACTaGAGCTCCCCCAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCSCAWD*SSPNFS
Trigger: AGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGCTACTGATTGGTGGTaGGGTCATCGAGTTGAACAT +
Preference number: 4 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLATDWW*GHRVEH
Trigger: ATGTTCAACTCGATGACCCCACCACCAATCAGTAGC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR CCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCACCGTAGGAGCCTCCTaGAGATGTGCATCGCGAGTT +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPITVGAS*RCASRV
Trigger: AACTCGCGATGCACATCTCCAGGAGGCTCCTACGGT...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCTGGGGACCACAAGGCTaGACCCCAAAGGAAGGCGAG +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLWGPQG*TPKEGE
Trigger: CTCGCCTTCCTTTGGGGTCCAGCCTTGTGGTCCCCA...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCTGTGGAGTTGGGGCTaGACATATCACCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNLWSWG*TYHLPR
Trigger: CCTTGGAAGGTGATATGTCCAGCCCCAACTCCACAG...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACTGCACCAGCTGCTCTTaGGAGTCAAATTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNCTSCS*ESNSWL
Trigger: CAGCCAGGAATTTGACTCCCAAGAGCAGCTGGTGCA...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCTCCGATTCTGGTGCTTaGCTCGGTCACTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPISDSGA*LGHWHC
Trigger: GCAATGCCAGTGACCGAGCCAAGCACCAGAATCGGA...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACAAGTACCACCCCCTCTaGCTGAAGCATATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNKYHPL*LKHILP
Trigger: GGGCAAGATATGCTTCAGCCAGAGGGGGTGGTACTT...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTAAGTACCACCCCCTCTaGCTGAAGCATATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPKYHPL*LKHILP
Trigger: GGGCAAGATATGCTTCAGCCAGAGGGGGTGGTACTT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTAGGCTCTTGAACCTCTaGACTCTAGCTGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPRLLNL*TLAGAG
Trigger: TCCTGCTCCAGCTAGAGTCCAGAGGTTCAAGAGCCT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTCCCATGTTTCTTGGGTaGGGTCAGGATATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPPMFLG*GQDMRP
Trigger: AGGCCTCATATCCTGACCCCACCCAAGAAACATGGG...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTAACCTGACTTGTGATTaGGCAAGTTGGGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCNLTCD*ASWVQS
Trigger: GCTTTGGACCCAACTTGCCCAATCACAAGTCAGGTT...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACTGCCCACAGCCATGTTaGGGGGCCCAGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYCPQPC*GAQREV
Trigger: CACCTCCCTCTGGGCCCCCCAACATGGCTGTGGGCA...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCTGGGTATAGGGGCCTaGCTGGAGATATTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLLGIGA*LEILGR
Trigger: CCTCCCCAATATCTCCAGTCAGGCCCCTATACCCAG...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCGCAAGGCCTGGGTTCTaGAGGAAGATAATCAGGGGG +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPARPGF*RKIIRG
Trigger: CCCCCTGATTATCTTCCTTCAGAACCCAGGCCTTGC...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCACACAAGCTGAGCCTTaGGCTGCCCTGTGGAATGGG +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLTQAEP*AALWNG
Trigger: CCCATTCCACAGGGCAGCTCAAGGCTCAGCTTGTGT...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCTGCTGCTGCCCTATGTaGAGCCCTATTTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLCCCPM*SPICPH
Trigger: GTGGGGGCAAATAGGGCTTCACATAGGGCAGCAGCA...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATAGGAAATGCGATCTGTaGTGGATGAGATTCCCTACT +
Preference number: 4 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHRKCDL*WMRFPT
Trigger: AGTAGGGAATCTCATCCATCACAGATCGCATTTCCT...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCGCTTCTTGGTCAACTTaGCTTCTGTCCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIASWST*LLSPHW
Trigger: CCAGTGTGGGGACAGAAGTCAAGTTGACCAAGAAGC...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546141.5
CDS-3UTR GCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCATGTGGTGCACCAGCTaGTCTTGGGAGTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPMWCTS*SWESNS
Trigger: GGAATTTGACTCCCAAGAGCAGCTGGTGCACCACAT...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTATGTGGTGCACCAGCTaGTCTTGGGAGTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPMWCTS*SWESNS
Trigger: GGAATTTGACTCCCAAGAGCAGCTGGTGCACCACAT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCTGTAGAAATGGATGGTaGCCGAGGCAGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLCRNGW*PRQGAI
Trigger: GATGGCCCCCTGCCTCGGGCACCATCCATTTCTACA...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCTTCAGTGCTGCCCCCTaGATTGCCAGTCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIFSAAP*IASHFH
Trigger: GTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAA...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCGACATGAGGTTAGCTTaGTGGCAGAAGGGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLDMRLA*WQKGGP
Trigger: TGGCCCGCCCTTCTGCCACCAAGCTAACCTCATGTC...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCGGCTCATGGTGCCAATaGAGAGATGACCGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPGSWCQ*RDDRRS
Trigger: GCTCCTACGGTCATCTCTCCATTGGCACCATGAGCC...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGTATGCCTGTGGAGTTaGGGCTGGACATATCACCTT +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPVCLWS*GWTYHL
Trigger: AAGGTGATATGTCCAGCCCCAACTCCACAGGCATAC...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGATCCTGTATGCCTGTaGAGTTGGGGCTGGACATAT +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPDPVCL*SWGWTY
Trigger: ATATGTCCAGCCCCAACTCCACAGGCATACAGGATC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCTCCTTCCGCTCCCCGTaGATGTGCTCGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLSFRSP*MCSLLM
Trigger: CATCAACAGCGAGCACATCCACGGGGAGCGGAAGGA...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCTGCCGTTTGGTCACATaGGCGTCAGGACCATGCACT +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPCRLVT*ASGPCT
Trigger: AGTGCATGGTCCTGACGCCCATGTGACCAAACGGCA...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCTTCATGGCACCCTCTaGCACAGTCAGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPILHGTL*HSQSAF
Trigger: GAAAGCAGACTGACTGTGCCAGAGGGTGCCATGAAG...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCTATCCGATCCAGGCTaGATGCTGCAGTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLLSDPG*MLQWAK
Trigger: CTTCGCCCACTGCAGCATCCAGCCTGGATCGGATAG...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACTTCTCCAAGGAGGCATaGGAAGACCACCTATCCGAT +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNFSKEA*EDHLSD
Trigger: ATCGGATAGGTGGTCTTCCCATGCCTCCTTGGAGAA...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCAGAGTATCAGTAGGTaGGAAGTCCATATAGGGGTT +
Preference number: 4 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCQSISR*EVHIGV
Trigger: AACCCCTATATGGACTTCCCACCTACTGATACTCTG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCCATGTTTCTTGGGTaGGGTCAGGATATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIPMFLG*GQDMRP
Trigger: AGGCCTCATATCCTGACCCCACCCAAGAAACATGGG...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCAGCTGCCCTGTGGAATaGGTGGGGGAATCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPSCPVE*VGESKS
Trigger: GGACTTTGATTCCCCCACCCATTCCACAGGGCAGCT...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCAGGATGACCACAGCTaGGGTTTGTGCCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPQDDHS*GLCLPL
Trigger: AAGTGGGAGGCACAAACCCCAGCTGTGGTCATCCTG...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCATACCTCCCATCCCTaGGGCATCTTGTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPHTSHP*GILCMG
Trigger: TCCCATGCACAAGATGCCCCAGGGATGGGAGGTATG...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCGGTCACTGGCATTGCTaGAGGCTTTACTGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLGHWHC*RLYCSP
Trigger: AGGGCTGCAGTAAAGCCTTCAGCAATGCCAGTGACC...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACGTAGCTGGTCCAGCCTaGGGTTCTCAAGGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYVAGPA*GSQGGE
Trigger: TTCGCCGCCTTGAGAACCTCAGGCTGGACCAGCTAC...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCTTGGTCAACTTGACTaGACTCCGGGGAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNLGQLD*TPGRRK
Trigger: TTTTCTTCTCCCCGGAGTGCAGTCAAGTTGACCAAG...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000543426.5
CDS-3UTR GCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTCTTGGTCAACTTGACTaGACTCCGGGGAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPLGQLD*TPGRRK
Trigger: TTTTCTTCTCCCCGGAGTGCAGTCAAGTTGACCAAG...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000543426.5
CDS-3UTR GCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCTCTCGCCAGTGTGTCTaGGCATGTGAACCACCAGCA +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLSRQCV*ACEPPA
Trigger: TGCTGGTGGTTCACATGCGCAGACACACTGGCGAGA...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTTGGGCGTCAGGACCATaGACTGTCTTGACATGTTTT +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPWASGP*TVLTCF
Trigger: AAAACATGTCAAGACAGTGCATGGTCCTGACGCCCA...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCAGAGGTCTTCAGTGCTaGCCCCTGCATTGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLRGLQC*PLHCQS
Trigger: TGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCT...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCCTCCGGGTGACCCCTaGATTGGGGTTGTATCCTGG +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYPPGDP*IGVVSW
Trigger: CCAGGATACAACCCCAATGCAGGGGTCACCCGGAGG...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCTGCTCGCTGTTGATGTaGTGCACCAGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLCSLLM*CTSCSW
Trigger: CCAAGAGCAGCTGGTGCACCACATCAACAGCGAGCA...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCCAGGGCTTGGCTGTaGCTTCATGGCACCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSPRAWL*LHGTLW
Trigger: CCAGAGGGTGCCATGAAGCCACAGCCAAGCCCTGGG...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCACAGTGGTACCGGTGTaGGACAAGCTGGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLTVVPV*DKLGSL
Trigger: CAAACTGCCCAGCTTGTCCCACACCGGTACCACTGT...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGGCTGGATGCTGCAGTaGGCGAAGTACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSGWMLQ*AKYHPL
Trigger: GAGGGGGTGGTACTTCGCCCACTGCAGCATCCAGCC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGGATATGAGGCCTGCTaGGGACAGGGGTTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSGYEAC*GQGLGP
Trigger: TGGCCCCAACCCCTGTCCCCAGCAGGCCTCATATCC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCTGGGCACCCCTGTTCTaGCTTGACTTGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLWAPLF*LDLHLS
Trigger: GGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCA...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTTCCATATGTGTTCACTaGAGCTTTAGCACGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPSICVH*SFSTAW
Trigger: CCAAGCCGTGCTAAAGCTCCAGTGAACACATATGGA...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACAACCTGACTTGTGATTaGGCAAGTTGGGTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNNLTCD*ASWVQS
Trigger: GCTTTGGACCCAACTTGCCCAATCACAAGTCAGGTT...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCATAGCAAGTGGGCAATaGGGGCAGAAGTCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLIASGQ*GQKSRW
Trigger: CCACCTCGACTTCTGCCCCCATTGCCCACTTGCTAT...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACACAAGCTGGGCAGTTTaGGACCCCGGGTCCCTATTG +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYTSWAV*DPGSLL
Trigger: CAATAGGGACCCGGGGTCTCAAACTGCCCAGCTTGT...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCACCCCTGTTCTGGCTTaGCTTGCACTTGTCCATAAT +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPITPVLA*LALVHN
Trigger: ATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGT...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCGCGATCTGTGATGGATaGGATTCCCTACTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIAICDG*DSLLFR
Trigger: CCTAAAGAGTAGGGAATCTCATCCATCACAGATCGC...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCAGGAAATGCGATCTGTaGTGGATGAGATTCCCTACT +
Preference number: 4 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPRKCDL*WMRFPT
Trigger: AGTAGGGAATCTCATCCATCACAGATCGCATTTCCT...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACTGCTGGAGCTGCTGCTaGGGCGTTCAAGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYCWSCC*GVQERL
Trigger: CAGTCTCTCTTGAACGCCGCAGCAGCAGCTCCAGCA...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGTTCTGTCCTCCCCCTaGCACAGTGGGTGGGGTATG +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSVLSSP*HSGWGM
Trigger: CATACCCCACCCACTGTGGCAGGGGGAGGACAGAAC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCTCTTGTGCATGGGACTaGAGCTCCCCCAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPISCAWD*SSPNFS
Trigger: AGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGA...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACATGAGGCGGGGTAGCTaGAAGCAAGAGAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYMRRGS*KQEKGC
Trigger: GCACCCCTTCTCTTGCTTCCAGCTACCCCGCCTCAT...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CCA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTATAGCTACTGATTGGTaGTGGGGTCATCGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPIATDW*WGHRVE
Trigger: TTCAACTCGATGACCCCACCACCAATCAGTAGCTAT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR CCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGTTGGTCTCTCTGGCTaGCCCATAACTGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSVGLSG*PITVGA
Trigger: GGCCCCCACAGTTATGGGCCAGCCAGAGAGACCAAC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCCGACAGAGGTGAGATaGACAGTGCCCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYPTEVR*TVPASW
Trigger: CCAAGAAGCGGGCACTGTCCATCTCACCTCTGTCGG...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCAGAGATGGGCTCATaGTGCCAATGGAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLPEMGS*CQWRDD
Trigger: GTCATCTCTCCATTGGCACCATGAGCCCATCTCTGG...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCACCACTGTCTGTATTaGCTGCACTCCCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSHHCLY*LHSLPG
Trigger: CCCCGGCAGGGAGTGCAGCCAATACAGACAGTGGTG...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCAGGCTCTTGAACCTCTaGACTCTAGCTGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLRLLNL*TLAGAG
Trigger: TCCTGCTCCAGCTAGAGTCCAGAGGTTCAAGAGCCT...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCAGAGTATCAGTAGGTaGGAAGTCCATATAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNQSISR*EVHIGV
Trigger: AACCCCTATATGGACTTCCCACCTACTGATACTCTG...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCAGTATAGGCAGAGCTaGTGCTGCTGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSQYRQS*CCWSCC
Trigger: GCAGCAGCTCCAGCAGCATCAGCTCTGCCTATACTG...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACTCGCTGTTGATGTGGTaGACCAGCTGCTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYSLLMW*TSCSWE
Trigger: CTCCCAAGAGCAGCTGGTGCACCACATCAACAGCGA...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCTGGGTCCGATTCTGGTaGTTGGCTCGGTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSWVRFW*LARSLA
Trigger: TGCCAGTGACCGAGCCAAGCACCAGAATCGGACCCA...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCTGGGCGTCAGGACCATaGACTGTCTTGACATGTTTT +
Preference number: 4 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPWASGP*TVLTCF
Trigger: AAAACATGTCAAGACAGTGCATGGTCCTGACGCCCA...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACAGAGGTCTTCAGTGCTaGCCCCTGCATTGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYRGLQC*PLHCQS
Trigger: TGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCT...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCATCCAGGCTGGATGCTaGAGTGGGCGAAGTACCACC +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSIQAGC*SGRSTT
Trigger: GGTGGTACTTCGCCCACTGCAGCATCCAGCCTGGAT...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCATAGCTACTGATTGGTaGTGGGGTCATCGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIIATDW*WGHRVE
Trigger: TTCAACTCGATGACCCCACCACCAATCAGTAGCTAT...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR CCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACTTGGCTGTGGCTTCATaGCACCCTCTGGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYLAVAS*HPLAQS
Trigger: TGACTGTGCCAGAGGGTGCCATGAAGCCACAGCCAA...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGCCCTGTGGAATGGGTaGGGGAATCAAAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSALWNG*GNQSPG
Trigger: GCCTGGACTTTGATTCCCCCACCCATTCCACAGGGC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCATACCTCCCATCCCTaGGGCATCTTGTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYHTSHP*GILCMG
Trigger: TCCCATGCACAAGATGCCCCAGGGATGGGAGGTATG...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACAGTCAAATTCCTGGCTaGAGCCATCCCAACGGCAGT +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYSQIPG*SHPNGS
Trigger: ACTGCCGTTGGGATGGCTGCAGCCAGGAATTTGACT...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCTGTATAGCGTTTGGTaGAGCCAGGGAGCTTACATA +
Preference number: 4 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLLYSVW*SQGAYI
Trigger: TATGTAAGCTCCCTGGCTGCACCAAACGCTATACAG...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCTGCCGTTTGGTCACATaGGCGTCAGGACCATGCACT +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSCRLVT*ASGPCT
Trigger: AGTGCATGGTCCTGACGCCCATGTGACCAAACGGCA...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCACAGTGGTACCGGTGTaGGACAAGCTGGGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSTVVPV*DKLGSL
Trigger: CAAACTGCCCAGCTTGTCCCACACCGGTACCACTGT...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCTGCACCAGCTGCTCTTaGGAGTCAAATTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSCTSCS*ESNSWL
Trigger: CAGCCAGGAATTTGACTCCCAAGAGCAGCTGGTGCA...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CCA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACTGTGATTGGGCAAGTTaGGTCCAAAGCCAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYCDWAS*VQSQVH
Trigger: ATGGACCTGGCTTTGGACCCAACTTGCCCAATCACA...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGGTGGGATAGGAACCTaGCTTGTGATTGGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSGGIGT*LVIGQV
Trigger: AACTTGCCCAATCACAAGTCAGGTTCCTATCCCACC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR TCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGCGATCTGTGATGGATaGGATTCCCTACTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSAICDG*DSLLFR
Trigger: CCTAAAGAGTAGGGAATCTCATCCATCACAGATCGC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR GCA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCTGTATAGCGTTTGGTaGAGCCAGGGAGCTTACATA +
Preference number: 4 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSLYSVW*SQGAYI
Trigger: TATGTAAGCTCCCTGGCTGCACCAAACGCTATACAG...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp GAGTTGAACATGGCGTCTCAGAGGAGGGTGTGGGGACACTCTGTCTaGGCGCTGGGCTCGGGATGCGCGGTCCAGGGCTGGAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: ELNMASQRRVWGHSV*ALGSGCAVQGWSLG
Trigger: GCCCAGACTCCAGCCCTGGACCGCGCATCCCGAGCCCAGCGCCCAGACAGAGTGTCCCCACACCCTCCTCTGAGACGCCATGTTCAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS CCA 90 bp GGTGGTGGGGTCATCGAGTTGAACATGGCGTCTCAGAGGAGGGTGTaGGGACACTCTGTCTGGGCGCTGGGCTCGGGATGCGCGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GGGVIELNMASQRRV*GHSVWALGSGCAVQ
Trigger: CTGGACCGCGCATCCCGAGCCCAGCGCCCAGACAGAGTGTCCCCACACCCTCCTCTGAGACGCCATGTTCAACTCGATGACCCCACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS CCA 90 bp GGGACCTCCTTCCCGCTCCCTCTTGGGCTCCACTGTAGAAATGGATaGTGCCCGAGGCAGGGGGCCATCCCCACGGTGCCGTTTGGTCAC +
Preference number: 5 (lower is better)
Translates to: GTSFPLPLGLHCRNG*CPRQGAIPTVPFGH
Trigger: GTGACCAAACGGCACCGTGGGGATGGCCCCCTGCCTCGGGCACCATCCATTTCTACAGTGGAGCCCAAGAGGGAGCGGGAAGGAGGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp CAACTTGACTGCACTCCGGGGAGAAGAAAAGAGTGGGCCTCTGTCTaGGCGCTGGGCTCGGGATGCGCGGTCCAGGGCTGGAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QLDCTPGRRKEWASV*ALGSGCAVQGWSLG
Trigger: GCCCAGACTCCAGCCCTGGACCGCGCATCCCGAGCCCAGCGCCCAGACAGAGGCCCACTCTTTTCTTCTCCCCGGAGTGCAGTCAAGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532291.5
ENST00000543426.5
CDS CCA 90 bp TGGGGTATGGACACAGCCCAGGCTCTTGAACCTCTGGACTCTAGCTaGAGCAGGACGGTCAGCAGCCTGGGCTGGGTCACTGGCCCTCCG +
Preference number: 5 (lower is better)
Translates to: WGMDTAQALEPLDSS*SRTVSSLGWVTGPP
Trigger: CGGAGGGCCAGTGACCCAGCCCAGGCTGCTGACCGTCCTGCTCCAGCTAGAGTCCAGAGGTTCAAGAGCCTGGGCTGTGTCCATACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp CCGCTTCTTGGTCAACTTGACTGCACTCCGGGGAGAAGAAAAGAGTaGGCCTCTGTCTGGGCGCTGGGCTCGGGATGCGCGGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: PLLGQLDCTPGRRKE*ASVWALGSGCAVQG
Trigger: GCCCTGGACCGCGCATCCCGAGCCCAGCGCCCAGACAGAGGCCCACTCTTTTCTTCTCCCCGGAGTGCAGTCAAGTTGACCAAGAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532291.5
ENST00000543426.5
CDS TCA 90 bp CGCGGCGGGACACAGTGGTACCGGTGTGGGACAAGCTGGGCAGTTTaGGACCCCGGGTCCCTATTGGCCGGAGTTGATGTAGCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: RGGTQWYRCGTSWAV*DPGSLLAGVDVAGP
Trigger: TGGACCAGCTACATCAACTCCGGCCAATAGGGACCCGGGGTCTCAAACTGCCCAGCTTGTCCCACACCGGTACCACTGTGTCCCGCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp ACCTCCTTCCCGCTCCCTCTTGGGCTCCACTGTAGAAATGGATGGTaGCCGAGGCAGGGGGCCATCCCCACGGTGCCGTTTGGTCACATG +
Preference number: 5 (lower is better)
Translates to: TSFPLPLGLHCRNGW*PRQGAIPTVPFGHM
Trigger: CATGTGACCAAACGGCACCGTGGGGATGGCCCCCTGCCTCGGGCACCATCCATTTCTACAGTGGAGCCCAAGAGGGAGCGGGAAGGAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp CCTGTCCTTCGGGAGGAGGGTACAAGGCAGGACCCCCTCCTAGCCTaGCCACCTCAGGATGACCACAGCTGGGGTTTGTGCCTCCCACTT +
Preference number: 5 (lower is better)
Translates to: PVLREEGTRQDPLLA*PPQDDHSWGLCLPL
Trigger: AAGTGGGAGGCACAAACCCCAGCTGTGGTCATCCTGAGGTGGGCAGGCTAGGAGGGGGTCCTGCCTTGTACCCTCCTCCCGAAGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp GAGGGGCCGGAGACAGCAGGGCTCGCCATAGCTACTGATTGGTGGTaGGGTCATCGAGTTGAACATGGCGTCTCAGAGGAGGGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: EGPETAGLAIATDWW*GHRVEHGVSEEGVG
Trigger: CCCCACACCCTCCTCTGAGACGCCATGTTCAACTCGATGACCCCACCACCAATCAGTAGCTATGGCGAGCCCTGCTGTCTCCGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000528432.1
ENST00000546141.5
CDS CCA 90 bp TGGGTCACTGGCCCTCCGGGTGACCCCTGCATTGGGGTTGTATCCTaGATACTCGGCTCGGCTTCTCCAAGGAGGCATGGGAAGACCACC +
Preference number: 5 (lower is better)
Translates to: WVTGPPGDPCIGVVS*ILGSASPRRHGKTT
Trigger: GGTGGTCTTCCCATGCCTCCTTGGAGAAGCCGAGCCGAGTATCCAGGATACAACCCCAATGCAGGGGTCACCCGGAGGGCCAGTGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCAGGCGAGGGCCCTTTTaGGTGATTCATCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSRRGPF*VIHLGW
Trigger: CCAGCCCAGATGAATCACCAAAAAGGGCCCTCGCCT...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGGATGTGCTCGCTGTaGATGTGGTGCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPQPIPPIPGASCAWDCSWMCSL*MWCTSC
Trigger: GCAGCTGGTGCACCACATCAACAGCGAGCACATCCA...GCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGTGCTGCCCCCTGCATaGCCAGTCATTTCCACACCA +
Preference number: 5 (lower is better)
Translates to: APSPYLPSLGHLVHGTAAVLPPA*PVISTP
Trigger: TGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCAC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS TCA 90 bp GACCCCGGGTCCCTATTGGCCGGAGTTGATGTAGCTGGTCCAGCCTaGGGTTCTCAAGGCGGCGAAGAGTGGACAGACCAGTGCCAGCAA +
Preference number: 5 (lower is better)
Translates to: DPGSLLAGVDVAGPA*GSQGGEEWTDQCQQ
Trigger: TTGCTGGCACTGGTCTGTCCACTCTTCGCCGCCTTGAGAACCTCAGGCTGGACCAGCTACATCAACTCCGGCCAATAGGGACCCGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp CTGGCTAGCCATTCCTGTTACCCCCTGGGGCTCACGTGCACCAGCTaGTCTTGGGAGTCAAATTCCTGGCTGCAGCCATCCCAACGGCAG +
Preference number: 5 (lower is better)
Translates to: LASHSCYPLGLTCTS*SWESNSWLQPSQRQ
Trigger: CTGCCGTTGGGATGGCTGCAGCCAGGAATTTGACTCCCAAGAGCAGCTGGTGCACGTGAGCCCCAGGGGGTAACAGGAATGGCTAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CCA 90 bp TCCGATCCAGGCTGGATGCTGCAGTGGGCGAAGTACCACCCCCTCTaGCTGAAGCATATCTTGCCCGAAGCAGGTAGTGCTGGGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SDPGWMLQWAKYHPL*LKHILPEAGSAGQA
Trigger: TGCCTGCCCAGCACTACCTGCTTCGGGCAAGATATGCTTCAGCCAGAGGGGGTGGTACTTCGCCCACTGCAGCATCCAGCCTGGATCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp TTAGGGGCCTCTTGGCCCGGGGCTGACTGCACCTCATGGTGCCAATaGAGAGATGACCGTAGGAGCCTCCTGGAGATGTGCATCGCGAGT +
Preference number: 5 (lower is better)
Translates to: LGASWPGADCTSWCQ*RDDRRSLLEMCIAS
Trigger: ACTCGCGATGCACATCTCCAGGAGGCTCCTACGGTCATCTCTCCATTGGCACCATGAGGTGCAGTCAGCCCCGGGCCAAGAGGCCCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530789.1
CDS-3UTR CAA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTCCCCACGGTGCCGTTaGGTCACATGGGCGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGSPRCR*VTWASG
Trigger: TCCTGACGCCCATGTGACCAAACGGCACCGTGGGGA...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTACCCCTGCATTGGGGTaGTATCCTGGATACTCGGCT +
Preference number: 5 (lower is better)
Translates to: APSPYLPSLGHLVHGTAATPALG*YPGYSA
Trigger: AGCCGAGTATCCAGGATACAACCCCAATGCAGGGGT...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCACATCCCTGGGGCATCTaGTGCATGGGACTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAHPWGI*CMGLQL
Trigger: GAGCTGCAGTCCCATGCACAAGATGCCCCAGGGATG...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp TGGGGTTGTATCCTGGATACTCGGCTCGGCTTCTCCAAGGAGGCATaGGAAGACCACCTATCCGATCCAGGCTGGATGCTGCAGTGGGCG +
Preference number: 5 (lower is better)
Translates to: WGCILDTRLGFSKEA*EDHLSDPGWMLQWA
Trigger: CGCCCACTGCAGCATCCAGCCTGGATCGGATAGGTGGTCTTCCCATGCCTCCTTGGAGAAGCCGAGCCGAGTATCCAGGATACAACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp CCTGCCCTAAGTGCCCCCACCCAAGCAGCTGGAACCTCCTGGGTTTaGAAGGGACTTCCTCCTCAGACTACACTGGTGAATGGGATGGGC +
Preference number: 5 (lower is better)
Translates to: PALSAPTQAAGTSWV*KGLPPQTTLVNGMG
Trigger: GCCCATCCCATTCACCAGTGTAGTCTGAGGAGGAAGTCCCTTCCAAACCCAGGAGGTTCCAGCTGCTTGGGTGGGGGCACTTAGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS-3UTR CAA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGATCCTCCCCCTCCCTaGAGGGACCCTATACTGCTT +
Preference number: 5 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTADPPPP*RDPILL
Trigger: AAGCAGTATAGGGTCCCTCAAGGGAGGGGGAGGATC...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CAA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGATGTGCATCGCGAGTaGATGAAAGCTACGAGGGAG +
Preference number: 5 (lower is better)
Translates to: APSPYLPSLGHLVHGTAADVHRE*MKATRE
Trigger: CTCCCTCGTAGCTTTCATCAACTCGCGATGCACATC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAGCTGACAGTGCCCGCTTCTaGGTCAACTTGACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: APSPYLPSLGHLVHGTAADSARF*VNLTSV
Trigger: GACAGAAGTCAAGTTGACCAAGAAGCGGGCACTGTC...AGCTGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546141.5
CDS TCA 90 bp ATCCAGGCTGGATGCTGCAGTGGGCGAAGTACCACCCCCTCTGGCTaGAGCATATCTTGCCCGAAGCAGGTAGTGCTGGGCAGGCATAAG +
Preference number: 5 (lower is better)
Translates to: IQAGCCSGRSTTPSG*SISCPKQVVLGRHK
Trigger: CTTATGCCTGCCCAGCACTACCTGCTTCGGGCAAGATATGCTTCAGCCAGAGGGGGTGGTACTTCGCCCACTGCAGCATCCAGCCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp AGAAGAAAAGAGTGGGCCCTCGGTGCAGCTGTTGGTCTCTCTGGCTaGCCCATAACTGTGGGGGCCGGACATGAGGTTAGCTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RRKEWALGAAVGLSG*PITVGAGHEVSLVA
Trigger: TGCCACCAAGCTAACCTCATGTCCGGCCCCCACAGTTATGGGCCAGCCAGAGAGACCAACAGCTGCACCGAGGGCCCACTCTTTTCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000528432.1
CDS CCA 90 bp GAGGCATGGGAAGACCACCTATCCGATCCAGGCTGGATGCTGCAGTaGGCGAAGTACCACCCCCTCTGGCTGAAGCATATCTTGCCCGAA +
Preference number: 5 (lower is better)
Translates to: EAWEDHLSDPGWMLQ*AKYHPLWLKHILPE
Trigger: TTCGGGCAAGATATGCTTCAGCCAGAGGGGGTGGTACTTCGCCCACTGCAGCATCCAGCCTGGATCGGATAGGTGGTCTTCCCATGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp GGTCTTCCTGCCCTAAGTGCCCCCACCCAAGCAGCTGGAACCTCCTaGGTTTGGAAGGGACTTCCTCCTCAGACTACACTGGTGAATGGG +
Preference number: 5 (lower is better)
Translates to: GLPALSAPTQAAGTS*VWKGLPPQTTLVNG
Trigger: CCCATTCACCAGTGTAGTCTGAGGAGGAAGTCCCTTCCAAACCCAGGAGGTTCCAGCTGCTTGGGTGGGGGCACTTAGGGCAGGAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS-3UTR CAA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCACGCTTCTTGGTCAACTaGACTGCACTCCGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTARFLVN*TALRGE
Trigger: TTCTCCCCGGAGTGCAGTCAAGTTGACCAAGAAGCG...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000543426.5
CDS-3UTR CAA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGGTCCGATTCTGGTGCTaGGCTCGGTCACTGGCATTG +
Preference number: 5 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGVRFWC*ARSLAL
Trigger: CAATGCCAGTGACCGAGCCAAGCACCAGAATCGGAC...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGCCTTCCCGCTCCCTCTaGGGCTCCACTGTAGAAATG +
Preference number: 5 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGPSRSL*GSTVEM
Trigger: CATTTCTACAGTGGAGCCCAAGAGGGAGCGGGAAGG...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp GTCCCTCGTCCAAGCTGGAGAGGTCTTCAGTGCTGCCCCCTGCATTaGCAGTCATTTCCACACCACTGTCTGTATTGGCTGCACTCCCTG +
Preference number: 5 (lower is better)
Translates to: VPRPSWRGLQCCPLH*QSFPHHCLYWLHSL
Trigger: CAGGGAGTGCAGCCAATACAGACAGTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp CTAAAGGTTCTGGCTAGCCATTCCTGTTACCCCCTGGGGCTCACGTaGACCAGCTGCTCTTGGGAGTCAAATTCCTGGCTGCAGCCATCC +
Preference number: 5 (lower is better)
Translates to: LKVLASHSCYPLGLT*TSCSWESNSWLQPS
Trigger: GGATGGCTGCAGCCAGGAATTTGACTCCCAAGAGCAGCTGGTGCACGTGAGCCCCAGGGGGTAACAGGAATGGCTAGCCAGAACCTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CCA 90 bp GAGTGGACAGACCAGTGCCAGCAATGCAAGGTCCCTCGTCCAAGCTaGAGAGGTCTTCAGTGCTGCCCCCTGCATTGCCAGTCATTTCCA +
Preference number: 5 (lower is better)
Translates to: EWTDQCQQCKVPRPS*RGLQCCPLHCQSFP
Trigger: TGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGACCTTGCATTGCTGGCACTGGTCTGTCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp AATGTTCAAGTCGAGGACACTGGCTGTAGGTTCCACCTAGAGCCTTaGGGCCTGGGTACAGCCCAGAGTGGGAAGGGAACTCACCCCATG +
Preference number: 5 (lower is better)
Translates to: NVQVEDTGCRFHLEP*GLGTAQSGKGTHPM
Trigger: CATGGGGTGAGTTCCCTTCCCACTCTGGGCTGTACCCAGGCCCCAAGGCTCTAGGTGGAACCTACAGCCAGTGTCCTCGACTTGAACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp GTGGGCATTGAGGCAGGGTGCCAGTCCTGTGGAGTCAGACCCCACTaGGCACCCCTGTTCTGGCTTGACTTGCACTTGTCCATAATGTTC +
Preference number: 5 (lower is better)
Translates to: VGIEAGCQSCGVRPH*APLFWLDLHLSIMF
Trigger: GAACATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCCACAGGACTGGCACCCTGCCTCAATGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp AACCAAGCCAGGTCTTCCTGCCCTAAGTGCCCCCACCCAAGCAGCTaGAACCTCCTGGGTTTGGAAGGGACTTCCTCCTCAGACTACACT +
Preference number: 5 (lower is better)
Translates to: NQARSSCPKCPHPSS*NLLGLEGTSSSDYT
Trigger: AGTGTAGTCTGAGGAGGAAGTCCCTTCCAAACCCAGGAGGTTCCAGCTGCTTGGGTGGGGGCACTTAGGGCAGGAAGACCTGGCTTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS-3UTR CAA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATGGTTCCTCCCGGCACTaGCCAACCAGCATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHGSSRH*PTSMSS
Trigger: GCTGGACATGCTGGTTGGCAAGTGCCGGGAGGAACC...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGTCCGATTCTGGTGCTaGGCTCGGTCACTGGCATTG +
Preference number: 5 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWVRFWC*ARSLAL
Trigger: CAATGCCAGTGACCGAGCCAAGCACCAGAATCGGAC...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGCCTTCCCGCTCCCTCTaGGGCTCCACTGTAGAAATG +
Preference number: 5 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWPSRSL*GSTVEM
Trigger: CATTTCTACAGTGGAGCCCAAGAGGGAGCGGGAAGG...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCATGGCTGAAGCATATCTaGCCCGAAGCAGGTAGTGCT +
Preference number: 5 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTAWLKHI*PEAGSA
Trigger: AGCACTACCTGCTTCGGGCAAGATATGCTTCAGCCA...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGCGGGTGACCCCTGCATaGGGGTTGTATCCTGGATAC +
Preference number: 5 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWRVTPA*GLYPGY
Trigger: GTATCCAGGATACAACCCCAATGCAGGGGTCACCCG...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp GCAAGGTCCCTCGTCCAAGCTGGAGAGGTCTTCAGTGCTGCCCCCTaGATTGCCAGTCATTTCCACACCACTGTCTGTATTGGCTGCACT +
Preference number: 5 (lower is better)
Translates to: ARSLVQAGEVFSAAP*IASHFHTTVCIGCT
Trigger: AGTGCAGCCAATACAGACAGTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGACCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp GTAGACAGAGGTTGGGAGGTAAGGATCAAAGTTCTGTCCTCCCCCTaGCACAGTGGGTGGGGTATGGACACAGCCCAGGCTCTTGAACCT +
Preference number: 5 (lower is better)
Translates to: VDRGWEVRIKVLSSP*HSGWGMDTAQALEP
Trigger: AGGTTCAAGAGCCTGGGCTGTGTCCATACCCCACCCACTGTGGCAGGGGGAGGACAGAACTTTGATCCTTACCTCCCAACCTCTGTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp AGATGGGCTCATGGTGCCAATGGAGAGATGACCGTAGGAGCCTCCTaGAGATGTGCATCGCGAGTTGATGAAAGCTACGAGGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RWAHGANGEMTVGAS*RCASRVDESYEGAG
Trigger: CCCAGCTCCCTCGTAGCTTTCATCAACTCGCGATGCACATCTCCAGGAGGCTCCTACGGTCATCTCTCCATTGGCACCATGAGCCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000532291.5
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp GGGTGCCAGTCCTGTGGAGTCAGACCCCACTGGGCACCCCTGTTCTaGCTTGACTTGCACTTGTCCATAATGTTCAAGTCGAGGACACTG +
Preference number: 5 (lower is better)
Translates to: GCQSCGVRPHWAPLF*LDLHLSIMFKSRTL
Trigger: CAGTGTCCTCGACTTGAACATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCCACAGGACTGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp ACTGCACCTCATGGTGCCAATGGAGAGATGACCGTAGGAGCCTCCTaGAGATGTGCATCGCGAGTTGATGAAAGCTACGAGGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: TAPHGANGEMTVGAS*RCASRVDESYEGAG
Trigger: CCCAGCTCCCTCGTAGCTTTCATCAACTCGCGATGCACATCTCCAGGAGGCTCCTACGGTCATCTCTCCATTGGCACCATGAGGTGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530789.1
CDS-3UTR CAA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACAGTGCCCGCTTCTaGGTCAACTTGACTGCACTC +
Preference number: 5 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWDSARF*VNLTAL
Trigger: GAGTGCAGTCAAGTTGACCAAGAAGCGGGCACTGTC...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000543426.5
CDS-3UTR CAA 90 bp ATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACTGCAACATACGGCTTCTCATaGGAATGGGTCCGATTCTGG +
Preference number: 5 (lower is better)
Translates to: IAPSPYLPSLGHLVHGTATYGFS*EWVRFW
Trigger: CCAGAATCGGACCCATTCCAATGAGAAGCCGTATGT...TGCAGTCCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGTGCTGCCCCCTGCATaGCCAGTCATTTCCACACCA +
Preference number: 5 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHVLPPA*PVISTP
Trigger: TGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCAC...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGACCCCGGGTCCCTATaGGCCGGAGTTGATGTAGCT +
Preference number: 5 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLDPGSL*AGVDVA
Trigger: AGCTACATCAACTCCGGCCAATAGGGACCCGGGGTC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCATCCCTGGGGCATCTaGTGCATGGGACTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHHPWGI*CMGLQL
Trigger: GAGCTGCAGTCCCATGCACAAGATGCCCCAGGGATG...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS TCA 90 bp CCAGTCCTGTGGAGTCAGACCCCACTGGGCACCCCTGTTCTGGCTTaGCTTGCACTTGTCCATAATGTTCAAGTCGAGGACACTGGCTGT +
Preference number: 5 (lower is better)
Translates to: PVLWSQTPLGTPVLA*LALVHNVQVEDTGC
Trigger: ACAGCCAGTGTCCTCGACTTGAACATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCCACAGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp CAGCAATGCAAGGTCCCTCGTCCAAGCTGGAGAGGTCTTCAGTGCTaGCCCCTGCATTGCCAGTCATTTCCACACCACTGTCTGTATTGG +
Preference number: 5 (lower is better)
Translates to: QQCKVPRPSWRGLQC*PLHCQSFPHHCLYW
Trigger: CCAATACAGACAGTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGACCTTGCATTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp TGCCAGCAATGCAAGGTCCCTCGTCCAAGCTGGAGAGGTCTTCAGTaGTGCCCCCTGCATTGCCAGTCATTTCCACACCACTGTCTGTAT +
Preference number: 5 (lower is better)
Translates to: CQQCKVPRPSWRGLQ*CPLHCQSFPHHCLY
Trigger: ATACAGACAGTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGACCTTGCATTGCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTAGGCGAGGGCCCTTTTaGGTGATTCATCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLRRGPF*VIHLGW
Trigger: CCAGCCCAGATGAATCACCAAAAAGGGCCCTCGCCT...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp CTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGGACATACGGCTTCTCATaGGAATGGGTCCGATTCTGG +
Preference number: 5 (lower is better)
Translates to: LYIAPSPYLPSLGHLVHGTYGFS*EWVRFW
Trigger: CCAGAATCGGACCCATTCCAATGAGAAGCCGTATGT...CCCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCTCCCCACGGTGCCGTTaGGTCACATGGGCGTCAGGA +
Preference number: 5 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPSPRCR*VTWASG
Trigger: TCCTGACGCCCATGTGACCAAACGGCACCGTGGGGA...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCTGCCCCCTGCATaGCCAGTCATTTCCACACCA +
Preference number: 5 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLVLPPA*PVISTP
Trigger: TGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCAC...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATACCCCTGCATTGGGGTaGTATCCTGGATACTCGGCT +
Preference number: 5 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHTPALG*YPGYSA
Trigger: AGCCGAGTATCCAGGATACAACCCCAATGCAGGGGT...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCGGGTGACCCCTGCATaGGGGTTGTATCCTGGATAC +
Preference number: 5 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCRVTPA*GLYPGY
Trigger: GTATCCAGGATACAACCCCAATGCAGGGGTCACCCG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGAGTAAGACACTCATGTaGCCCACAGCCATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWSKTLM*PTAMLG
Trigger: CCCCAACATGGCTGTGGGCAACATGAGTGTCTTACT...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS GCA 90 bp CTGCCTACCCAACTGAGCATTCAACCTCAGTCTCCTCTGACCTCCTaGCCTCAGCCGGATTCCACCATGTCCCACTCAGAATCTCCTAAA +
Preference number: 5 (lower is better)
Translates to: LPTQLSIQPQSPLTS*PQPDSTMSHSESPK
Trigger: TTTAGGAGATTCTGAGTGGGACATGGTGGAATCCGGCTGAGGGCAGGAGGTCAGAGGAGACTGAGGTTGAATGCTCAGTTGGGTAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CCA 90 bp CAGACTACACTGGTGAATGGGATGGGCAAAAGGTGGGATCCCATTTaGAAGCGTCTGACTCAACTGCAAGGAGTGAACCCCAGCACCCAC +
Preference number: 5 (lower is better)
Translates to: QTTLVNGMGKRWDPI*KRLTQLQGVNPSTH
Trigger: GTGGGTGCTGGGGTTCACTCCTTGCAGTTGAGTCAGACGCTTCCAAATGGGATCCCACCTTTTGCCCATCCCATTCACCAGTGTAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS-3UTR CAA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCTATTTCCCTCCCTCTaGCCGTTCTGGAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCLFPSL*PFWRMR
Trigger: CCTCATCCTCCAGAACGGCAAGAGGGAGGGAAATAG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CAA 90 bp AGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATTGTATGCCTGTGGAGTaGGGGCTGGACATATCACCT +
Preference number: 5 (lower is better)
Translates to: RLYIAPSPYLPSLGHLVHCMPVE*GLDISP
Trigger: AGGTGATATGTCCAGCCCCAACTCCACAGGCATACA...ATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCTCGGTCACTGGCATaGCTGAAGGCTTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCARSLA*LKALLQ
Trigger: CTGCAGTAAAGCCTTCAGCAATGCCAGTGACCGAGC...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCTCCCCACGGTGCCGTTaGGTCACATGGGCGTCAGGA +
Preference number: 5 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPISPRCR*VTWASG
Trigger: TCCTGACGCCCATGTGACCAAACGGCACCGTGGGGA...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACGACCCCGGGTCCCTATaGGCCGGAGTTGATGTAGCT +
Preference number: 5 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNDPGSL*AGVDVA
Trigger: AGCTACATCAACTCCGGCCAATAGGGACCCGGGGTC...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp CTCCTGGGTTTGGAAGGGACTTCCTCCTCAGACTACACTGGTGAATaGGATGGGCAAAAGGTGGGATCCCATTTGGAAGCGTCTGACTCA +
Preference number: 5 (lower is better)
Translates to: LLGLEGTSSSDYTGE*DGQKVGSHLEASDS
Trigger: TGAGTCAGACGCTTCCAAATGGGATCCCACCTTTTGCCCATCCCATTCACCAGTGTAGTCTGAGGAGGAAGTCCCTTCCAAACCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS-3UTR CAA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGGTGGGGTCATCGAGTaGAACATGGCGTCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPGGVIE*NMASQR
Trigger: CCTCTGAGACGCCATGTTCAACTCGATGACCCCACC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR CAA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCTCGGTGCAGCTGTaGGTCTCTCTGGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLPSVQL*VSLAGP
Trigger: TGGGCCAGCCAGAGAGACCAACAGCTGCACCGAGGG...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CAA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGATGTGCATCGCGAGTaGATGAAAGCTACGAGGGAG +
Preference number: 5 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCDVHRE*MKATRE
Trigger: CTCCCTCGTAGCTTTCATCAACTCGCGATGCACATC...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATTGTATGCCTGTGGAGTaGGGGCTGGACATATCACCT +
Preference number: 5 (lower is better)
Translates to: NVYRLYIAPSPYLPSLGHCMPVE*GLDISP
Trigger: AGGTGATATGTCCAGCCCCAACTCCACAGGCATACA...ATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCTGGATGTGCTCGCTGTaGATGTGGTGCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPWMCSL*MWCTSC
Trigger: GCAGCTGGTGCACCACATCAACAGCGAGCACATCCA...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGACAAGCTGGGCAGTTaGAGACCCCGGGTCCCTATT +
Preference number: 5 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPDKLGS*RPRVPI
Trigger: AATAGGGACCCGGGGTCTCAAACTGCCCAGCTTGTC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTTGGCTGAAGCATATCTaGCCCGAAGCAGGTAGTGCT +
Preference number: 5 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCWLKHI*PEAGSA
Trigger: AGCACTACCTGCTTCGGGCAAGATATGCTTCAGCCA...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCGTTCCACCTAGAGCCTaGGGGCCTGGGTACAGCCCA +
Preference number: 5 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPVPPRA*GPGYSP
Trigger: TGGGCTGTACCCAGGCCCCAAGGCTCTAGGTGGAAC...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTAGTAAGACACTCATGTaGCCCACAGCCATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: VYRLYIAPSPYLPSLGHLSKTLM*PTAMLG
Trigger: CCCCAACATGGCTGTGGGCAACATGAGTGTCTTACT...AAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp GGACTTCCTCCTCAGACTACACTGGTGAATGGGATGGGCAAAAGGTaGGATCCCATTTGGAAGCGTCTGACTCAACTGCAAGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: GLPPQTTLVNGMGKR*DPIWKRLTQLQGVN
Trigger: GTTCACTCCTTGCAGTTGAGTCAGACGCTTCCAAATGGGATCCCACCTTTTGCCCATCCCATTCACCAGTGTAGTCTGAGGAGGAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS-3UTR CAA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCGGACATGAGGTTAGCTaGGTGGCAGAAGGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLGHEVS*VAEGRA
Trigger: GGCCCGCCCTTCTGCCACCAAGCTAACCTCATGTCC...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228682.7
CDS-3UTR CAA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGACAGTGCCCGCTTCTaGGTCAACTTGACTGCACTC +
Preference number: 5 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPDSARF*VNLTAL
Trigger: GAGTGCAGTCAAGTTGACCAAGAAGCGGGCACTGTC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000543426.5
CDS-3UTR CAA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCAGGCGAGGGCCCTTTTaGGTGATTCATCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIRRGPF*VIHLGW
Trigger: CCAGCCCAGATGAATCACCAAAAAGGGCCCTCGCCT...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACGCTCGGTCACTGGCATaGCTGAAGGCTTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNARSLA*LKALLQ
Trigger: CTGCAGTAAAGCCTTCAGCAATGCCAGTGACCGAGC...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCCCGCTCGGTCACTGGCATaGCTGAAGGCTTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: ILCMGLQLPQFFWKDRNPARSLA*LKALLQ
Trigger: CTGCAGTAAAGCCTTCAGCAATGCCAGTGACCGAGC...GGGGTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTTCCCGCTCCCTCTaGGGCTCCACTGTAGAAATG +
Preference number: 5 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIPSRSL*GSTVEM
Trigger: CATTTCTACAGTGGAGCCCAAGAGGGAGCGGGAAGG...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCGACAAGCTGGGCAGTTaGAGACCCCGGGTCCCTATT +
Preference number: 5 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPIDKLGS*RPRVPI
Trigger: AATAGGGACCCGGGGTCTCAAACTGCCCAGCTTGTC...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCGTTCCACCTAGAGCCTaGGGGCCTGGGTACAGCCCA +
Preference number: 5 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLVPPRA*GPGYSP
Trigger: TGGGCTGTACCCAGGCCCCAAGGCTCTAGGTGGAAC...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTGCATGGTGGCTTGACTTGCACTaGTCCATAATGTTCAAGTCG +
Preference number: 5 (lower is better)
Translates to: TIHSPQPIPPIPGASCAWWLDLH*SIMFKS
Trigger: CGACTTGAACATTATGGACAAGTGCAAGTCAAGCCA...CCATGCACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS CCA 90 bp TTTCATGGCATGGTGAAGGGGTGGGATAGGAACCTGACTTGTGATTaGGCAAGTTGGGTCCAAAGCCAGGTCCATATGTGTTCACTGGAG +
Preference number: 5 (lower is better)
Translates to: FHGMVKGWDRNLTCD*ASWVQSQVHMCSLE
Trigger: CTCCAGTGAACACATATGGACCTGGCTTTGGACCCAACTTGCCCAATCACAAGTCAGGTTCCTATCCCACCCCTTCACCATGCCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCGGTGGGGTCATCGAGTaGAACATGGCGTCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPGGVIE*NMASQR
Trigger: CCTCTGAGACGCCATGTTCAACTCGATGACCCCACC...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS-3UTR CAA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCTGGATGTGCTCGCTGTaGATGTGGTGCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPWMCSL*MWCTSC
Trigger: GCAGCTGGTGCACCACATCAACAGCGAGCACATCCA...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCGTCCGATTCTGGTGCTaGGCTCGGTCACTGGCATTG +
Preference number: 5 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPVRFWC*ARSLAL
Trigger: CAATGCCAGTGACCGAGCCAAGCACCAGAATCGGAC...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCACACAGCCCAGGCTCTaGAACCTCTGGACTCTAGCT +
Preference number: 5 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPITQPRL*NLWTLA
Trigger: AGCTAGAGTCCAGAGGTTCAAGAGCCTGGGCTGTGT...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTAGTAAGACACTCATGTaGCCCACAGCCATGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SSKRIQTIHSPQPIPPIPSKTLM*PTAMLG
Trigger: CCCCAACATGGCTGTGGGCAACATGAGTGTCTTACT...AGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACCGCTTCTTGGTCAACTaGACTTCTGTCCCCACACTG +
Preference number: 5 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNRFLVN*TSVPTL
Trigger: CAGTGTGGGGACAGAAGTCAAGTTGACCAAGAAGCG...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546141.5
CDS TCA 90 bp GTAGCTCCTGTTGAGATTGAACATAATTACACACAAGCTGAGCCTTaGGCTGCCCTGTGGAATGGGTGGGGGAATCAAAGTCCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: VAPVEIEHNYTQAEP*AALWNGWGNQSPGK
Trigger: CTTGCCTGGACTTTGATTCCCCCACCCATTCCACAGGGCAGCTCAAGGCTCAGCTTGTGTGTAATTATGTTCAATCTCAACAGGAGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS TCA 90 bp TCACATCTCAGGTCTTCCAGCTCCCTAAGGCAAAGCTACAACTTCTaGGCTTCTGCCTACCCAACTGAGCATTCAACCTCAGTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SHLRSSSSLRQSYNF*ASAYPTEHSTSVSS
Trigger: AGAGGAGACTGAGGTTGAATGCTCAGTTGGGTAGGCAGAAGCTCAGAAGTTGTAGCTTTGCCTTAGGGAGCTGGAAGACCTGAGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS-3UTR CAA 90 bp TTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCTGTATGCCTGTGGAGTaGGGGCTGGACATATCACCT +
Preference number: 5 (lower is better)
Translates to: FSSKRIQTIHSPQPIPPICMPVE*GLDISP
Trigger: AGGTGATATGTCCAGCCCCAACTCCACAGGCATACA...GATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp GGCATCTTGTGCATGGGACTGCAGCTCCCCCAATTTTTCTGGAAGGATAGAAACACATACGGCTTCTCATaGGAATGGGTCCGATTCTGG +
Preference number: 5 (lower is better)
Translates to: GILCMGLQLPQFFWKDRNTYGFS*EWVRFW
Trigger: CCAGAATCGGACCCATTCCAATGAGAAGCCGTATGT...GTTTCTATCCTTCCAGAAAAATTGGGGGAGCTGCAGTCCCATGCACAAGATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCGGGTGACCCCTGCATaGGGGTTGTATCCTGGATAC +
Preference number: 5 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLRVTPA*GLYPGY
Trigger: GTATCCAGGATACAACCCCAATGCAGGGGTCACCCG...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACGTTCCACCTAGAGCCTaGGGGCCTGGGTACAGCCCA +
Preference number: 5 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYVPPRA*GPGYSP
Trigger: TGGGCTGTACCCAGGCCCCAAGGCTCTAGGTGGAAC...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp ATACAGACTATACATAGCCCCCAGCCCATACCTCCCATCCCTGGGGCATCTTGTCTGTTCTGGCTTGACTaGCACTTGTCCATAATGTTC +
Preference number: 5 (lower is better)
Translates to: IQTIHSPQPIPPIPGASCLFWLD*HLSIMF
Trigger: GAACATTATGGACAAGTGCAAGTCAAGCCAGAACAG...ACAAGATGCCCCAGGGATGGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGGTTCCTCCCGGCACTaGCCAACCAGCATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSGSSRH*PTSMSS
Trigger: GCTGGACATGCTGGTTGGCAAGTGCCGGGAGGAACC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGACCCCGGGTCCCTATaGGCCGGAGTTGATGTAGCT +
Preference number: 5 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSDPGSL*AGVDVA
Trigger: AGCTACATCAACTCCGGCCAATAGGGACCCGGGGTC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCGACAAGCTGGGCAGTTaGAGACCCCGGGTCCCTATT +
Preference number: 5 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSDKLGS*RPRVPI
Trigger: AATAGGGACCCGGGGTCTCAAACTGCCCAGCTTGTC...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACACACAGCCCAGGCTCTaGAACCTCTGGACTCTAGCT +
Preference number: 5 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYTQPRL*NLWTLA
Trigger: AGCTAGAGTCCAGAGGTTCAAGAGCCTGGGCTGTGT...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACTGGCTGAAGCATATCTaGCCCGAAGCAGGTAGTGCT +
Preference number: 5 (lower is better)
Translates to: YQISPQNVYRLYIAPSPYWLKHI*PEAGSA
Trigger: AGCACTACCTGCTTCGGGCAAGATATGCTTCAGCCA...GTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCACCCCTGCATTGGGGTaGTATCCTGGATACTCGGCT +
Preference number: 5 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSTPALG*YPGYSA
Trigger: AGCCGAGTATCCAGGATACAACCCCAATGCAGGGGT...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp TGTCATTATCAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCACACAGCCCAGGCTCTaGAACCTCTGGACTCTAGCT +
Preference number: 5 (lower is better)
Translates to: CHYQISPQNVYRLYIAPSTQPRL*NLWTLA
Trigger: AGCTAGAGTCCAGAGGTTCAAGAGCCTGGGCTGTGT...GCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTGATAATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCTGGCTTGACTTGCACTaGTCCATAATGTTCAAGTCG +
Preference number: 5 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPWLDLH*SIMFKS
Trigger: CGACTTGAACATTATGGACAAGTGCAAGTCAAGCCA...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp AATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCCCCTGTTCTGGCTTGACTaGCACTTGTCCATAATGTTC +
Preference number: 5 (lower is better)
Translates to: NFSSKRIQTIHSPQPIPPLFWLD*HLSIMF
Trigger: GAACATTATGGACAAGTGCAAGTCAAGCCAGAACAG...GGGAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS-3UTR CAA 90 bp CAAATTTCTCCTCAAAACGTATACAGACTATACATAGCCCCCAGCCCATACCTCTGGCTTGACTTGCACTaGTCCATAATGTTCAAGTCG +
Preference number: 5 (lower is better)
Translates to: QISPQNVYRLYIAPSPYLWLDLH*SIMFKS
Trigger: CGACTTGAACATTATGGACAAGTGCAAGTCAAGCCA...GAGGTATGGGCTGGGGGCTATGTATAGTCTGTATACGTTTTGAGGAGAAATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp CTCAGAGGAGGGTGTGGGGACACTCTGTCTGGGCGCTaGGCTCGGGATGCGCGGTCCAGGGCTGGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: LRGGCGDTLSGR*ARDARSRAGVW
Trigger: CCAGACTCCAGCCCTGGACCGCGCATCCCGAGCCCAGCGCCCAGACAGAGTGTCCCCACACCCTCCTCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS CCA 72 bp ATGGCGTCTCAGAGGAGGGTGTGGGGACACTCTGTCTaGGCGCTGGGCTCGGGATGCGCGGTCCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: MASQRRVWGHSV*ALGSGCAVQGW
Trigger: CCAGCCCTGGACCGCGCATCCCGAGCCCAGCGCCCAGACAGAGTGTCCCCACACCCTCCTCTGAGACGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS CCA 72 bp GCTGCTGGAGCTGCTGCTGCGGCGTTCAAGAGAGACTaGGGGGCCCACGCGGCGGGACACAGTGGTACCGGT +
Preference number: 6 (lower is better)
Translates to: AAGAAAAAFKRD*GAHAAGHSGTG
Trigger: ACCGGTACCACTGTGTCCCGCCGCGTGGGCCCCCCAGTCTCTCTTGAACGCCGCAGCAGCAGCTCCAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp CGGGGAGAAGAAAAGAGTGGGCCTCTGTCTGGGCGCTaGGCTCGGGATGCGCGGTCCAGGGCTGGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: RGEEKSGPLSGR*ARDARSRAGVW
Trigger: CCAGACTCCAGCCCTGGACCGCGCATCCCGAGCCCAGCGCCCAGACAGAGGCCCACTCTTTTCTTCTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532291.5
ENST00000543426.5
CDS CCA 72 bp TGCACTCCGGGGAGAAGAAAAGAGTGGGCCTCTGTCTaGGCGCTGGGCTCGGGATGCGCGGTCCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: CTPGRRKEWASV*ALGSGCAVQGW
Trigger: CCAGCCCTGGACCGCGCATCCCGAGCCCAGCGCCCAGACAGAGGCCCACTCTTTTCTTCTCCCCGGAGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532291.5
ENST00000543426.5
CDS CCA 72 bp TTCCCGCTCCCTCTTGGGCTCCACTGTAGAAATGGATaGTGCCCGAGGCAGGGGGCCATCCCCACGGTGCCG +
Preference number: 6 (lower is better)
Translates to: FPLPLGLHCRNG*CPRQGAIPTVP
Trigger: CGGCACCGTGGGGATGGCCCCCTGCCTCGGGCACCATCCATTTCTACAGTGGAGCCCAAGAGGGAGCGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp CCGCTCCCTCTTGGGCTCCACTGTAGAAATGGATGGTaGCCGAGGCAGGGGGCCATCCCCACGGTGCCGTTT +
Preference number: 6 (lower is better)
Translates to: PLPLGLHCRNGW*PRQGAIPTVPF
Trigger: AAACGGCACCGTGGGGATGGCCCCCTGCCTCGGGCACCATCCATTTCTACAGTGGAGCCCAAGAGGGAGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp GGCCCTCCGGGTGACCCCTGCATTGGGGTTGTATCCTaGATACTCGGCTCGGCTTCTCCAAGGAGGCATGGG +
Preference number: 6 (lower is better)
Translates to: GPPGDPCIGVVS*ILGSASPRRHG
Trigger: CCCATGCCTCCTTGGAGAAGCCGAGCCGAGTATCCAGGATACAACCCCAATGCAGGGGTCACCCGGAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CAA 90 bp CTCTCTGGCTGGCCCATAACTGTGGGGGCCGGACATGAGGTTAGCTaGGTGGCAGAAGGGCGGGCCAGACAGTCCTTCTGTCCCCACACT +
Preference number: 6 (lower is better)
Translates to: LSGWPITVGAGHEVS*VAEGRARQSFCPHT
Trigger: AGTGTGGGGACAGAAGGACTGTCTGGCCCGCCCTTCTGCCACCAAGCTAACCTCATGTCCGGCCCCCACAGTTATGGGCCAGCCAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000528432.1
CDS CCA 72 bp GTCATCGAGTTGAACATGGCGTCTCAGAGGAGGGTGTaGGGACACTCTGTCTGGGCGCTGGGCTCGGGATGC +
Preference number: 6 (lower is better)
Translates to: VIELNMASQRRV*GHSVWALGSGC
Trigger: GCATCCCGAGCCCAGCGCCCAGACAGAGTGTCCCCACACCCTCCTCTGAGACGCCATGTTCAACTCGATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000546141.5
CDS CCA 72 bp GGTGGGGTATGGACACAGCCCAGGCTCTTGAACCTCTaGACTCTAGCTGGAGCAGGACGGTCAGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: GGVWTQPRLLNL*TLAGAGRSAAW
Trigger: CCAGGCTGCTGACCGTCCTGCTCCAGCTAGAGTCCAGAGGTTCAAGAGCCTGGGCTGTGTCCATACCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp TTAGGGGCCTCTTGGCCCGGGGCTGACTGCACCTCATaGTGCCAATGGAGAGATGACCGTAGGAGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: LGASWPGADCTS*CQWRDDRRSLL
Trigger: CAGGAGGCTCCTACGGTCATCTCTCCATTGGCACCATGAGGTGCAGTCAGCCCCGGGCCAAGAGGCCCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530789.1
CDS CAA 72 bp GGGTCACTGGCCCTCCGGGTGACCCCTGCATTGGGGTaGTATCCTGGATACTCGGCTCGGCTTCTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: GSLALRVTPALG*YPGYSARLLQG
Trigger: TCCTTGGAGAAGCCGAGCCGAGTATCCAGGATACAACCCCAATGCAGGGGTCACCCGGAGGGCCAGTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS TCA 72 bp GGATGCTGCAGTGGGCGAAGTACCACCCCCTCTGGCTaGAGCATATCTTGCCCGAAGCAGGTAGTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GCCSGRSTTPSG*SISCPKQVVLG
Trigger: GCCCAGCACTACCTGCTTCGGGCAAGATATGCTTCAGCCAGAGGGGGTGGTACTTCGCCCACTGCAGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS TCA 72 bp AAGGCAGGACCCCCTCCTAGCCTGCCCACCTCAGGATaGCCACAGCTGGGGTTTGTGCCTCCCACTTTGAGA +
Preference number: 6 (lower is better)
Translates to: KAGPPPSLPTSG*PQLGFVPPTLR
Trigger: TCTCAAAGTGGGAGGCACAAACCCCAGCTGTGGTCATCCTGAGGTGGGCAGGCTAGGAGGGGGTCCTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp TCTTGGCCCGGGGCTGACTGCACCTCATGGTGCCAATaGAGAGATGACCGTAGGAGCCTCCTGGAGATGTGC +
Preference number: 6 (lower is better)
Translates to: SWPGADCTSWCQ*RDDRRSLLEMC
Trigger: GCACATCTCCAGGAGGCTCCTACGGTCATCTCTCCATTGGCACCATGAGGTGCAGTCAGCCCCGGGCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530789.1
CDS CAA 72 bp CTTTCCTCCCTGATGGGACCTCCTTCCCGCTCCCTCTaGGGCTCCACTGTAGAAATGGATGGTGCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: LSSLMGPPSRSL*GSTVEMDGARG
Trigger: GCCTCGGGCACCATCCATTTCTACAGTGGAGCCCAAGAGGGAGCGGGAAGGAGGTCCCATCAGGGAGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp CAAGGCGGCGAAGAGTGGACAGACCAGTGCCAGCAATaGAAGGTCCCTCGTCCAAGCTGGAGAGGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: QGGEEWTDQCQQ*KVPRPSWRGLQ
Trigger: CTGAAGACCTCTCCAGCTTGGACGAGGGACCTTGCATTGCTGGCACTGGTCTGTCCACTCTTCGCCGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp CATTCCTGTTACCCCCTGGGGCTCACGTGCACCAGCTaGTCTTGGGAGTCAAATTCCTGGCTGCAGCCATCC +
Preference number: 6 (lower is better)
Translates to: HSCYPLGLTCTS*SWESNSWLQPS
Trigger: GGATGGCTGCAGCCAGGAATTTGACTCCCAAGAGCAGCTGGTGCACGTGAGCCCCAGGGGGTAACAGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS GCA 72 bp CTGGCTAGCCATTCCTGTTACCCCCTGGGGCTCACGTaGACCAGCTGCTCTTGGGAGTCAAATTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LASHSCYPLGLT*TSCSWESNSWL
Trigger: CAGCCAGGAATTTGACTCCCAAGAGCAGCTGGTGCACGTGAGCCCCAGGGGGTAACAGGAATGGCTAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CCA 72 bp GGGCCGGAGACAGCAGGGCTCGCCATAGCTACTGATTaGTGGTGGGGTCATCGAGTTGAACATGGCGTCTCA +
Preference number: 6 (lower is better)
Translates to: GPETAGLAIATD*WWGHRVEHGVS
Trigger: TGAGACGCCATGTTCAACTCGATGACCCCACCACCAATCAGTAGCTATGGCGAGCCCTGCTGTCTCCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000528432.1
ENST00000546141.5
CDS CCA 72 bp GGCTGGATGCTGCAGTGGGCGAAGTACCACCCCCTCTaGCTGAAGCATATCTTGCCCGAAGCAGGTAGTGCT +
Preference number: 6 (lower is better)
Translates to: GWMLQWAKYHPL*LKHILPEAGSA
Trigger: AGCACTACCTGCTTCGGGCAAGATATGCTTCAGCCAGAGGGGGTGGTACTTCGCCCACTGCAGCATCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp GCCCTAAGTGCCCCCACCCAAGCAGCTGGAACCTCCTaGGTTTGGAAGGGACTTCCTCCTCAGACTACACTG +
Preference number: 6 (lower is better)
Translates to: ALSAPTQAAGTS*VWKGLPPQTTL
Trigger: CAGTGTAGTCTGAGGAGGAAGTCCCTTCCAAACCCAGGAGGTTCCAGCTGCTTGGGTGGGGGCACTTAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CAA 90 bp GCATCCGACAGAGGTGAGATGGACAGTGCCCGCTTCTTGGTCAACTaGACTGCACTCCGGGGAGAAGAAAAGAGTGGGCCCTCGGTGCAG +
Preference number: 6 (lower is better)
Translates to: ASDRGEMDSARFLVN*TALRGEEKSGPSVQ
Trigger: CTGCACCGAGGGCCCACTCTTTTCTTCTCCCCGGAGTGCAGTCAAGTTGACCAAGAAGCGGGCACTGTCCATCTCACCTCTGTCGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000528432.1
CDS CAA 90 bp GAGTTGGGGCTGGACATATCACCTTCCAAGGGTTCCTCCCGGCACTaGCCAACCAGCATGTCCAGCTCAGACTTCAGCTGGCAAGTTGGG +
Preference number: 6 (lower is better)
Translates to: ELGLDISPSKGSSRH*PTSMSSSDFSWQVG
Trigger: CCCAACTTGCCAGCTGAAGTCTGAGCTGGACATGCTGGTTGGCAAGTGCCGGGAGGAACCCTTGGAAGGTGATATGTCCAGCCCCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000532291.5
ENST00000543426.5
ENST00000546141.5
CDS CAA 90 bp GGTCCCTCGTCCAAGCTGGAGAGGTCTTCAGTGCTGCCCCCTGCATaGCCAGTCATTTCCACACCACTGTCTGTATTGGCTGCACTCCCT +
Preference number: 6 (lower is better)
Translates to: GPSSKLERSSVLPPA*PVISTPLSVLAALP
Trigger: AGGGAGTGCAGCCAATACAGACAGTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CAA 90 bp GCATCCGACAGAGGTGAGATGGACAGTGCCCGCTTCTTGGTCAACTaGACTGCACTCCGGGGAGAAGAAAAGAGTGGGCCTCTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: ASDRGEMDSARFLVN*TALRGEEKSGPLSG
Trigger: CCCAGACAGAGGCCCACTCTTTTCTTCTCCCCGGAGTGCAGTCAAGTTGACCAAGAAGCGGGCACTGTCCATCTCACCTCTGTCGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532291.5
ENST00000543426.5
CDS TCA 72 bp TCCCTATTGGCCGGAGTTGATGTAGCTGGTCCAGCCTaGGGTTCTCAAGGCGGCGAAGAGTGGACAGACCAG +
Preference number: 6 (lower is better)
Translates to: SLLAGVDVAGPA*GSQGGEEWTDQ
Trigger: CTGGTCTGTCCACTCTTCGCCGCCTTGAGAACCTCAGGCTGGACCAGCTACATCAACTCCGGCCAATAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS TCA 72 bp ACACAGTGGTACCGGTGTGGGACAAGCTGGGCAGTTTaGGACCCCGGGTCCCTATTGGCCGGAGTTGATGTA +
Preference number: 6 (lower is better)
Translates to: TQWYRCGTSWAV*DPGSLLAGVDV
Trigger: TACATCAACTCCGGCCAATAGGGACCCGGGGTCTCAAACTGCCCAGCTTGTCCCACACCGGTACCACTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp TGCAAGGTCCCTCGTCCAAGCTGGAGAGGTCTTCAGTaGTGCCCCCTGCATTGCCAGTCATTTCCACACCAC +
Preference number: 6 (lower is better)
Translates to: CKVPRPSWRGLQ*CPLHCQSFPHH
Trigger: GTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGACCTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp CCGGAGACAGCAGGGCTCGCCATAGCTACTGATTGGTaGTGGGGTCATCGAGTTGAACATGGCGTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: PETAGLAIATDW*WGHRVEHGVSE
Trigger: CTCTGAGACGCCATGTTCAACTCGATGACCCCACCACCAATCAGTAGCTATGGCGAGCCCTGCTGTCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000528432.1
ENST00000546141.5
CDS CCA 72 bp CCAACAGGGGATCCTGTATGCCTGTGGAGTTGGGGCTaGACATATCACCTTCCAAGGGTTCCTCCCGGCACT +
Preference number: 6 (lower is better)
Translates to: PTGDPVCLWSWG*TYHLPRVPPGT
Trigger: AGTGCCGGGAGGAACCCTTGGAAGGTGATATGTCCAGCCCCAACTCCACAGGCATACAGGATCCCCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228682.7
ENST00000527742.1
ENST00000528467.1
ENST00000532291.5
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp GCATCCCCAACAGGGGATCCTGTATGCCTGTGGAGTTaGGGCTGGACATATCACCTTCCAAGGGTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: ASPTGDPVCLWS*GWTYHLPRVPP
Trigger: GGGAGGAACCCTTGGAAGGTGATATGTCCAGCCCCAACTCCACAGGCATACAGGATCCCCTGTTGGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228682.7
ENST00000527742.1
ENST00000528467.1
ENST00000532291.5
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp CTGCATTGCCAGTCATTTCCACACCACTGTCTGTATTaGCTGCACTCCCTGCCGGGGAGTGGTCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: LHCQSFPHHCLY*LHSLPGSGHCC
Trigger: GCAGCAGTGACCACTCCCCGGCAGGGAGTGCAGCCAATACAGACAGTGGTGTGGAAATGACTGGCAATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp ATCCTGGATACTCGGCTCGGCTTCTCCAAGGAGGCATaGGAAGACCACCTATCCGATCCAGGCTGGATGCTG +
Preference number: 6 (lower is better)
Translates to: ILDTRLGFSKEA*EDHLSDPGWML
Trigger: CAGCATCCAGCCTGGATCGGATAGGTGGTCTTCCCATGCCTCCTTGGAGAAGCCGAGCCGAGTATCCAGGAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp CCACGGTGCCGTTTGGTCACATGGGCGTCAGGACCATaGACTGTCTTGACATGTTTTCGCAGCGAGCTAGGA +
Preference number: 6 (lower is better)
Translates to: PRCRLVTWASGP*TVLTCFRSELG
Trigger: TCCTAGCTCGCTGCGAAAACATGTCAAGACAGTGCATGGTCCTGACGCCCATGTGACCAAACGGCACCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp ATTGCCAGTCATTTCCACACCACTGTCTGTATTGGCTaGACTCCCTGCCGGGGAGTGGTCACTGCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: IASHFHTTVCIG*TPCRGVVTAAG
Trigger: TCCTGCAGCAGTGACCACTCCCCGGCAGGGAGTGCAGCCAATACAGACAGTGGTGTGGAAATGACTGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp AAGGTCCCTCGTCCAAGCTGGAGAGGTCTTCAGTGCTaGCCCCTGCATTGCCAGTCATTTCCACACCACTGT +
Preference number: 6 (lower is better)
Translates to: KVPRPSWRGLQC*PLHCQSFPHHC
Trigger: ACAGTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGACGAGGGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp GAGACAGCAGGGCTCGCCATAGCTACTGATTGGTGGTaGGGTCATCGAGTTGAACATGGCGTCTCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: ETAGLAIATDWW*GHRVEHGVSEE
Trigger: CTCCTCTGAGACGCCATGTTCAACTCGATGACCCCACCACCAATCAGTAGCTATGGCGAGCCCTGCTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228682.7
ENST00000528432.1
ENST00000546141.5
CDS CCA 72 bp GGAAGGCGAGGGCCCTTTTTGGTGATTCATCTGGGCTaGGAATCCCAGAGATGGGCTCATGGTGCCAATGGA +
Preference number: 6 (lower is better)
Translates to: GRRGPFLVIHLG*ESQRWAHGANG
Trigger: TCCATTGGCACCATGAGCCCATCTCTGGGATTCCCAGCCCAGATGAATCACCAAAAAGGGCCCTCGCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000532291.5
ENST00000543426.5
ENST00000546141.5
CDS CAA 72 bp AGAGGTGAGATGGACAGTGCCCGCTTCTTGGTCAACTaGACTGCACTCCGGGGAGAAGAAAAGAGTGGGCCC +
Preference number: 6 (lower is better)
Translates to: RGEMDSARFLVN*TALRGEEKSGP
Trigger: GGGCCCACTCTTTTCTTCTCCCCGGAGTGCAGTCAAGTTGACCAAGAAGCGGGCACTGTCCATCTCACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228682.7
ENST00000528432.1
CDS CAA 72 bp CTGGACATATCACCTTCCAAGGGTTCCTCCCGGCACTaGCCAACCAGCATGTCCAGCTCAGACTTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LDISPSKGSSRH*PTSMSSSDFSW
Trigger: CCAGCTGAAGTCTGAGCTGGACATGCTGGTTGGCAAGTGCCGGGAGGAACCCTTGGAAGGTGATATGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000532291.5
ENST00000543426.5
ENST00000546141.5
CDS CAA 90 bp GGAGTCAGACCCCACTGGGCACCCCTGTTCTGGCTTGACTTGCACTaGTCCATAATGTTCAAGTCGAGGACACTGGCTGTAGGTTCCACC +
Preference number: 6 (lower is better)
Translates to: GVRPHWAPLFWLDLH*SIMFKSRTLAVGST
Trigger: GGTGGAACCTACAGCCAGTGTCCTCGACTTGAACATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp CCAAGCTGGAGAGGTCTTCAGTGCTGCCCCCTGCATTaGCAGTCATTTCCACACCACTGTCTGTATTGGCTG +
Preference number: 6 (lower is better)
Translates to: PSWRGLQCCPLH*QSFPHHCLYWL
Trigger: CAGCCAATACAGACAGTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp CAACTGAGCATTCAACCTCAGTCTCCTCTGACCTCCTaGCCTCAGCCGGATTCCACCATGTCCCACTCAGAA +
Preference number: 6 (lower is better)
Translates to: QLSIQPQSPLTS*PQPDSTMSHSE
Trigger: TTCTGAGTGGGACATGGTGGAATCCGGCTGAGGGCAGGAGGTCAGAGGAGACTGAGGTTGAATGCTCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CAA 72 bp CTGGACATATCACCTTCCAAGGGTTCCTCCCGGCACTaGCCAACCAGCATGTCCAGCTCAGACTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LDISPSKGSSRH*PTSMSSSDFSF
Trigger: GAAGCTGAAGTCTGAGCTGGACATGCTGGTTGGCAAGTGCCGGGAGGAACCCTTGGAAGGTGATATGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CAA 72 bp AGAGGTGAGATGGACAGTGCCCGCTTCTTGGTCAACTaGACTGCACTCCGGGGAGAAGAAAAGAGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: RGEMDSARFLVN*TALRGEEKSGP
Trigger: AGGCCCACTCTTTTCTTCTCCCCGGAGTGCAGTCAAGTTGACCAAGAAGCGGGCACTGTCCATCTCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530789.1
ENST00000532291.5
ENST00000543426.5
CDS CAA 90 bp TCCTGTGGAGTCAGACCCCACTGGGCACCCCTGTTCTGGCTTGACTaGCACTTGTCCATAATGTTCAAGTCGAGGACACTGGCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: SCGVRPHWAPLFWLD*HLSIMFKSRTLAVG
Trigger: ACCTACAGCCAGTGTCCTCGACTTGAACATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS TCA 72 bp TGGAGTCAGACCCCACTGGGCACCCCTGTTCTGGCTTaGCTTGCACTTGTCCATAATGTTCAAGTCGAGGAC +
Preference number: 6 (lower is better)
Translates to: WSQTPLGTPVLA*LALVHNVQVED
Trigger: GTCCTCGACTTGAACATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS GCA 72 bp CTCGTCCAAGCTGGAGAGGTCTTCAGTGCTGCCCCCTaGATTGCCAGTCATTTCCACACCACTGTCTGTATT +
Preference number: 6 (lower is better)
Translates to: LVQAGEVFSAAP*IASHFHTTVCI
Trigger: AATACAGACAGTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGACGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp CATGGTGCCAATGGAGAGATGACCGTAGGAGCCTCCTaGAGATGTGCATCGCGAGTTGATGAAAGCTACGAG +
Preference number: 6 (lower is better)
Translates to: HGANGEMTVGAS*RCASRVDESYE
Trigger: CTCGTAGCTTTCATCAACTCGCGATGCACATCTCCAGGAGGCTCCTACGGTCATCTCTCCATTGGCACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000228682.7
ENST00000528432.1
ENST00000528467.1
ENST00000530789.1
ENST00000532291.5
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp TCCTGTGGAGTCAGACCCCACTGGGCACCCCTGTTCTaGCTTGACTTGCACTTGTCCATAATGTTCAAGTCG +
Preference number: 6 (lower is better)
Translates to: SCGVRPHWAPLF*LDLHLSIMFKS
Trigger: CGACTTGAACATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCAGTGGGGTCTGACTCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp CAAGTTGGGTCCAAAGCCAGGTCCATATGTGTTCACTaGAGCTTTAGCACGGCTTGGGCTAACCTGGGAACC +
Preference number: 6 (lower is better)
Translates to: QVGSKARSICVH*SFSTAWANLGT
Trigger: GGTTCCCAGGTTAGCCCAAGCCGTGCTAAAGCTCCAGTGAACACATATGGACCTGGCTTTGGACCCAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp CTGGTGAATGGGATGGGCAAAAGGTGGGATCCCATTTaGAAGCGTCTGACTCAACTGCAAGGAGTGAACCCC +
Preference number: 6 (lower is better)
Translates to: LVNGMGKRWDPI*KRLTQLQGVNP
Trigger: GGGGTTCACTCCTTGCAGTTGAGTCAGACGCTTCCAAATGGGATCCCACCTTTTGCCCATCCCATTCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CAA 72 bp TCCAAGCTGGAGAGGTCTTCAGTGCTGCCCCCTGCATaGCCAGTCATTTCCACACCACTGTCTGTATTGGCT +
Preference number: 6 (lower is better)
Translates to: SKLERSSVLPPA*PVISTPLSVLA
Trigger: AGCCAATACAGACAGTGGTGTGGAAATGACTGGCAATGCAGGGGGCAGCACTGAAGACCTCTCCAGCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CAA 72 bp CCCCACTGGGCACCCCTGTTCTGGCTTGACTTGCACTaGTCCATAATGTTCAAGTCGAGGACACTGGCTGTA +
Preference number: 6 (lower is better)
Translates to: PHWAPLFWLDLH*SIMFKSRTLAV
Trigger: TACAGCCAGTGTCCTCGACTTGAACATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CAA 72 bp GTCAGACCCCACTGGGCACCCCTGTTCTGGCTTGACTaGCACTTGTCCATAATGTTCAAGTCGAGGACACTG +
Preference number: 6 (lower is better)
Translates to: VRPHWAPLFWLD*HLSIMFKSRTL
Trigger: CAGTGTCCTCGACTTGAACATTATGGACAAGTGCAAGTCAAGCCAGAACAGGGGTGCCCAGTGGGGTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CAA 90 bp TCAGACTACACTGGTGAATGGGATGGGCAAAAGGTGGGATCCCATTaGGAAGCGTCTGACTCAACTGCAAGGAGTGAACCCCAGCACCCA +
Preference number: 6 (lower is better)
Translates to: SDYTGEWDGQKVGSH*EASDSTARSEPQHP
Trigger: TGGGTGCTGGGGTTCACTCCTTGCAGTTGAGTCAGACGCTTCCAAATGGGATCCCACCTTTTGCCCATCCCATTCACCAGTGTAGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CCA 72 bp GGGTGGGATAGGAACCTGACTTGTGATTGGGCAAGTTaGGTCCAAAGCCAGGTCCATATGTGTTCACTGGAG +
Preference number: 6 (lower is better)
Translates to: GWDRNLTCDWAS*VQSQVHMCSLE
Trigger: CTCCAGTGAACACATATGGACCTGGCTTTGGACCCAACTTGCCCAATCACAAGTCAGGTTCCTATCCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CAA 72 bp ACTGGTGAATGGGATGGGCAAAAGGTGGGATCCCATTaGGAAGCGTCTGACTCAACTGCAAGGAGTGAACCC +
Preference number: 6 (lower is better)
Translates to: TGEWDGQKVGSH*EASDSTARSEP
Trigger: GGGTTCACTCCTTGCAGTTGAGTCAGACGCTTCCAAATGGGATCCCACCTTTTGCCCATCCCATTCACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS CCA 72 bp ATGGTGAAGGGGTGGGATAGGAACCTGACTTGTGATTaGGCAAGTTGGGTCCAAAGCCAGGTCCATATGTGT +
Preference number: 6 (lower is better)
Translates to: MVKGWDRNLTCD*ASWVQSQVHMC
Trigger: ACACATATGGACCTGGCTTTGGACCCAACTTGCCCAATCACAAGTCAGGTTCCTATCCCACCCCTTCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5
CDS CCA 72 bp CCTCAGACTACACTGGTGAATGGGATGGGCAAAAGGTaGGATCCCATTTGGAAGCGTCTGACTCAACTGCAA +
Preference number: 6 (lower is better)
Translates to: PQTTLVNGMGKR*DPIWKRLTQLQ
Trigger: TTGCAGTTGAGTCAGACGCTTCCAAATGGGATCCCACCTTTTGCCCATCCCATTCACCAGTGTAGTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS TCA 72 bp AGGTCTTCCAGCTCCCTAAGGCAAAGCTACAACTTCTaGGCTTCTGCCTACCCAACTGAGCATTCAACCTCA +
Preference number: 6 (lower is better)
Translates to: RSSSSLRQSYNF*ASAYPTEHSTS
Trigger: TGAGGTTGAATGCTCAGTTGGGTAGGCAGAAGCTCAGAAGTTGTAGCTTTGCCTTAGGGAGCTGGAAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527742.1
CDS TCA 72 bp GTTGAGATTGAACATAATTACACACAAGCTGAGCCTTaGGCTGCCCTGTGGAATGGGTGGGGGAATCAAAGT +
Preference number: 6 (lower is better)
Translates to: VEIEHNYTQAEP*AALWNGWGNQS
Trigger: ACTTTGATTCCCCCACCCATTCCACAGGGCAGCTCAAGGCTCAGCTTGTGTGTAATTATGTTCAATCTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228682.7
ENST00000528467.1
ENST00000543426.5
ENST00000546141.5