RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000090863

Ensembl transcript IDs: ENST00000205061.9, ENST00000422840.7, ENST00000447066.6, ENST00000561481.1, ENST00000561942.1, ENST00000562090.5, ENST00000563646.1, ENST00000565260.1, ENST00000565474.1, ENST00000566601.1, ENST00000567911.1, ENST00000567951.5, ENST00000627032.2

Found 1318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCCCAGGGGAACCTGCAGAGACTCTCGGGCCGCTCACTCCGGCTaGCAGTGGCGGGAGGCAGTGTGTGCTGCTCGCACCCTGCGTTTC +
Preference number: 1 (lower is better)
Translates to: APRGTCRDSRAAHSG*QWREAVCAARTLRF
Trigger: GAAACGCAGGGTGCGAGCAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTCTGCAGGTTCCCCTGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp TTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGCTCCCGCTaGCGGCTTTCCGGAGGTCTCTGCCCAGTGCACTGCAGGGGGACC +
Preference number: 1 (lower is better)
Translates to: LGTLCWGKLPRKRSR*RLSGGLCPVHCRGT
Trigger: GGTCCCCCTGCAGTGCACTGGGCAGAGACCTCCGGAAAGCCGGCAGCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp CCAGGAAGCGCTCCCGCTGCCGGCTTTCCGGAGGTCTCTGCCCAGTaGACTGCAGGGGGACCTGGAGGGCCCATTTCTACCACCCTAGCA +
Preference number: 1 (lower is better)
Translates to: PGSAPAAGFPEVSAQ*TAGGPGGPISTTLA
Trigger: TGCTAGGGTGGTAGAAATGGGCCCTCCAGGTCCCCCTGCAGTGCACTGGGCAGAGACCTCCGGAAAGCCGGCAGCGGGAGCGCTTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp AGGGGAACCTGCAGAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTaGCGGGAGGCAGTGTGTGCTGCTCGCACCCTGCGTTTCCAGTTT +
Preference number: 1 (lower is better)
Translates to: RGTCRDSRAAHSGWQ*REAVCAARTLRFQF
Trigger: AAACTGGAAACGCAGGGTGCGAGCAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTCTGCAGGTTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp TGTTTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTaGCCAGGAAGCGCTCCCGCTGCCGGCTTTCCGGAGGTCTCTGCC +
Preference number: 1 (lower is better)
Translates to: CFPDGLVWEHCAGGS*PGSAPAAGFPEVSA
Trigger: GGCAGAGACCTCCGGAAAGCCGGCAGCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp AGCTCCTCCACACGGAGCTGCCTGCGGCACTTCAGGGACACCCTGTaGTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTC +
Preference number: 1 (lower is better)
Translates to: SSSTRSCLRHFRDTL*SLASCRVSLRTVVL
Trigger: GAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCACAGGGTGTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 90 bp CGCCTCGGTGAAGACCACGGCCCTGGCGAGGCCCCAAGGTGCTTCTaGGAGATGAACGAGACACCTCAGTCATGGCACACTGGGTGGTGT +
Preference number: 1 (lower is better)
Translates to: RLGEDHGPGEAPRCF*EMNETPQSWHTGWC
Trigger: ACACCACCCAGTGTGCCATGACTGAGGTGTCTCGTTCATCTCTCAGAAGCACCTTGGGGCCTCGCCAGGGCCGTGGTCTTCACCGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CCA 90 bp TGCCGGCTTTCCGGAGGTCTCTGCCCAGTGCACTGCAGGGGGACCTaGAGGGCCCATTTCTACCACCCTAGCATGTCTGACAGAAAGCCC +
Preference number: 1 (lower is better)
Translates to: CRLSGGLCPVHCRGT*RAHFYHPSMSDRKP
Trigger: GGGCTTTCTGTCAGACATGCTAGGGTGGTAGAAATGGGCCCTCCAGGTCCCCCTGCAGTGCACTGGGCAGAGACCTCCGGAAAGCCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp GTGAAGACCACGGCCCTGGCGAGGCCCCAAGGTGCTTCTGAGAGATaGACGAGACACCTCAGTCATGGCACACTGGGTGGTGTGCTTCCC +
Preference number: 1 (lower is better)
Translates to: VKTTALARPQGASER*TRHLSHGTLGGVLP
Trigger: GGGAAGCACACCACCCAGTGTGCCATGACTGAGGTGTCTCGTTCATCTCTCAGAAGCACCTTGGGGCCTCGCCAGGGCCGTGGTCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CCA 90 bp GCCTCCAGCCTGGCAGTCCGGGCTCCAGGTACCTCTAGAGGGCTGTaGCGCACACTATGCATAAGTCACAGGGACACTGGCATGAACTGG +
Preference number: 1 (lower is better)
Translates to: ASSLAVRAPGTSRGL*RTLCISHRDTGMNW
Trigger: CCAGTTCATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGTACCTGGAGCCCGGACTGCCAGGCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp GGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCATaGCTCCCCTGCCGGTGCTTCTTGCTAACGGGCTTGTCTAGGGAC +
Preference number: 1 (lower is better)
Translates to: GKIAFPGVIPSLWSA*LPCRCFLLTGLSRD
Trigger: GTCCCTAGACAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp CTGTACAGACTGTTTTCCGGATGGACTGGTTTGGGAACACTGTGCTaGGGGAAGCTGCCCAGGAAGCGCTCCCGCTGCCGGCTTTCCGGA +
Preference number: 1 (lower is better)
Translates to: LYRLFSGWTGLGTLC*GKLPRKRSRCRLSG
Trigger: TCCGGAAAGCCGGCAGCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAACAGTCTGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp AGAGCTTCCAGAGTGACTGTAGCCTCAGCAGGGCCGGTCCAGACATaGCTGAGTCCTGTGCTGCCCTGGAGGAGGAAGGTTCCTGGGATC +
Preference number: 1 (lower is better)
Translates to: RASRVTVASAGPVQT*LSPVLPWRRKVPGI
Trigger: GATCCCAGGAACCTTCCTCCTCCAGGGCAGCACAGGACTCAGCCATGTCTGGACCGGCCCTGCTGAGGCTACAGTCACTCTGGAAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 90 bp ACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGCTCGCACCCTaGGTTTCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTG +
Preference number: 1 (lower is better)
Translates to: TPAGSGGRQCVLLAP*VSSFRRLKHPRQLL
Trigger: CAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGAAACGCAGGGTGCGAGCAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp GCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCATGGCTCCCCTaGCGGTGCTTCTTGCTAACGGGCTTGTCTAGGGACAACAGCAAC +
Preference number: 1 (lower is better)
Translates to: AFPGVIPSLWSAWLP*RCFLLTGLSRDNSN
Trigger: GTTGCTGTTGTCCCTAGACAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp TTGCTGTACAGACTGTTTTCCGGATGGACTGGTTTGGGAACACTGTaGTGGGGGAAGCTGCCCAGGAAGCGCTCCCGCTGCCGGCTTTCC +
Preference number: 1 (lower is better)
Translates to: LLYRLFSGWTGLGTL*WGKLPRKRSRCRLS
Trigger: GGAAAGCCGGCAGCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAACAGTCTGTACAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp ACTGCTCCCCACACCCATCTTCAAGGACCCCTCCCGCCACAGTCCTaGCTCCTGATGAAGCGCAGAGCTTCCAGAGTGACTGTAGCCTCA +
Preference number: 1 (lower is better)
Translates to: TAPHTHLQGPLPPQS*LLMKRRASRVTVAS
Trigger: TGAGGCTACAGTCACTCTGGAAGCTCTGCGCTTCATCAGGAGGCAGGACTGTGGCGGGAGGGGTCCTTGAAGATGGGTGTGGGGAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 90 bp CCGGGGGTGATCCCAAGCCTATGGAGTGCATGGCTCCCCTGCCGGTaGTTCTTGCTAACGGGCTTGTCTAGGGACAACAGCAACAGCAAT +
Preference number: 1 (lower is better)
Translates to: PGVIPSLWSAWLPCR*FLLTGLSRDNSNSN
Trigger: ATTGCTGTTGCTGTTGTCCCTAGACAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCTTGGGATCACCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp GCACTTTGGAAGGCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTaGGGCCACTTTGGAAGGCCGAAGTGGGCACATCATGAGGTCAGG +
Preference number: 1 (lower is better)
Translates to: ALWKAEVHFGRSGPL*GHFGRPKWAHHEVR
Trigger: CCTGACCTCATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCCTTCCAAAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp ACAAGCAGGACCGAGGGGACTAAGCAGCTTAGCAGCTTCCCTTGGTaGCTTGGCAGGGGGACAATCAGTTGGCTTCTGGAACCCACTGCC +
Preference number: 1 (lower is better)
Translates to: TSRTEGTKQLSSFPW*LGRGTISWLLEPTA
Trigger: GGCAGTGGGTTCCAGAAGCCAACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAGCTGCTAAGCTGCTTAGTCCCCTCGGTCCTGCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp GATCTCATGCCCCAAACTCAACCAAAGGAGTGCCACGCTGAACCATaGTGCCCGGACCCCTCCCTCTCACACCCAGACTTGTCATCTCCA +
Preference number: 1 (lower is better)
Translates to: DLMPQTQPKECHAEP*CPDPSLSHPDLSSP
Trigger: TGGAGATGACAAGTCTGGGTGTGAGAGGGAGGGGTCCGGGCATCATGGTTCAGCGTGGCACTCCTTTGGTTGAGTTTGGGGCATGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp GGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTaGACATCCATCCTACCTGCAAACCACACCAGGCACGTCCGTAGG +
Preference number: 1 (lower is better)
Translates to: GRRLQRGRIPHPVKQ*TSILPANHTRHVRR
Trigger: CCTACGGACGTGCCTGGTGTGGTTTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp GGGAGCGGGAGAGGACCACGGGTCAGGATCCTGTCACCACCAGCCTaGGCAGACAGTCCCATCTTTGTGATCCAGGTGACAAATAATCAG +
Preference number: 1 (lower is better)
Translates to: GSGRGPRVRILSPPA*ADSPIFVIQVTNNQ
Trigger: CTGATTATTTGTCACCTGGATCACAAAGATGGGACTGTCTGCTCAGGCTGGTGGTGACAGGATCCTGACCCGTGGTCCTCTCCCGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp TGGAGGGCCCATTTCTACCACCCTAGCATGTCTGACAGAAAGCCCTaGTGGGCTCTGGGGTCCAGATGTCAACTCTACATTGGAGGAGGC +
Preference number: 1 (lower is better)
Translates to: WRAHFYHPSMSDRKP*WALGSRCQLYIGGG
Trigger: GCCTCCTCCAATGTAGAGTTGACATCTGGACCCCAGAGCCCAGCAGGGCTTTCTGTCAGACATGCTAGGGTGGTAGAAATGGGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp TCACACAGCATTTGCTGTACAGACTGTTTTCCGGATGGACTGGTTTaGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGCTCCCGCT +
Preference number: 1 (lower is better)
Translates to: SHSICCTDCFPDGLV*EHCAGGSCPGSAPA
Trigger: AGCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAACAGTCTGTACAGCAAATGCTGTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp CTGGGGCCACCTTTGCTGCGTAACTCCACATCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCGGGCTGTAACCTCACCCGCTTATCCT +
Preference number: 1 (lower is better)
Translates to: LGPPLLRNSTSQSGH*GAFCTRAVTSPAYP
Trigger: AGGATAAGCGGGTGAGGTTACAGCCCGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGATGTGGAGTTACGCAGCAAAGGTGGCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 90 bp ACGGGCTTGTCTAGGGACAACAGCAACAGCAATGGAAGTCCAACATaGACCCAGGTGAAGGCCTCACAGAGCTCCCCATCTGTGGGAGAA +
Preference number: 1 (lower is better)
Translates to: TGLSRDNSNSNGSPT*TQVKASQSSPSVGE
Trigger: TTCTCCCACAGATGGGGAGCTCTGTGAGGCCTTCACCTGGGTGCATGTTGGACTTCCATTGCTGTTGCTGTTGTCCCTAGACAAGCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp TCCCTTCCCCTCCCCAGCTGCCCTTGTCTAGGAAGGCTCATGCTTTaGTTCAATGAAGCGAGGAGACCACAGAAATACCCATGGCTGTGG +
Preference number: 1 (lower is better)
Translates to: SLPLPSCPCLGRLML*FNEARRPQKYPWLW
Trigger: CCACAGCCATGGGTATTTCTGTGGTCTCCTCGCTTCATTGAAGCAAAGCATGAGCCTTCCTAGACAAGGGCAGCTGGGGAGGGGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR TCA 90 bp CTAGGGACAACAGCAACAGCAATGGAAGTCCAACATGCACCCAGGTaGAGGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGT +
Preference number: 1 (lower is better)
Translates to: LGTTATAMEVQHAPR*RPHRAPHLWEKLHC
Trigger: ACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCCTTCACCTGGGTGCATGTTGGACTTCCATTGCTGTTGCTGTTGTCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp AGGGCCCATTTCTACCACCCTAGCATGTCTGACAGAAAGCCCTGCTaGGCTCTGGGGTCCAGATGTCAACTCTACATTGGAGGAGGCAAA +
Preference number: 1 (lower is better)
Translates to: RAHFYHPSMSDRKPC*ALGSRCQLYIGGGK
Trigger: TTTGCCTCCTCCAATGTAGAGTTGACATCTGGACCCCAGAGCCCAGCAGGGCTTTCTGTCAGACATGCTAGGGTGGTAGAAATGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp AGGAGACCACAGAAATACCCATGGCTGTGGGGCTGTGACCAGCAGTaGCTGATTAGGGTGGAAACTGGAAAGCGTCACTGTCTCAGCAGA +
Preference number: 1 (lower is better)
Translates to: RRPQKYPWLWGCDQQ*LIRVETGKRHCLSR
Trigger: TCTGCTGAGACAGTGACGCTTTCCAGTTTCCACCCTAATCAGCCACTGCTGGTCACAGCCCCACAGCCATGGGTATTTCTGTGGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR TCA 90 bp GACCACAGAAATACCCATGGCTGTGGGGCTGTGACCAGCAGTGGCTaGTTAGGGTGGAAACTGGAAAGCGTCACTGTCTCAGCAGAAGAA +
Preference number: 1 (lower is better)
Translates to: DHRNTHGCGAVTSSG*LGWKLESVTVSAEE
Trigger: TTCTTCTGCTGAGACAGTGACGCTTTCCAGTTTCCACCCTAATCAGCCACTGCTGGTCACAGCCCCACAGCCATGGGTATTTCTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 90 bp CTCCTACTGTACACACTGCTCTCTTGTGCAGCCACTGTGATCTCATaGCCCAAACTCAACCAAAGGAGTGCCACGCTGAACCATGATGCC +
Preference number: 1 (lower is better)
Translates to: LLLYTLLSCAATVIS*PKLNQRSATLNHDA
Trigger: GGCATCATGGTTCAGCGTGGCACTCCTTTGGTTGAGTTTGGGGCATGAGATCACAGTGGCTGCACAAGAGAGCAGTGTGTACAGTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp GGCCAGCTGAGTGACTCACTGTTCCCAAGAAGAGTAAGGACAGCATaGGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTC +
Preference number: 1 (lower is better)
Translates to: GQLSDSLFPRRVRTA*DSQRPAVCSSQYLL
Trigger: GAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCCTTACTCTTCTTGGGAACAGTGAGTCACTCAGCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp CAGTGGACATCTGCTAATGCTCTAACACGGGGTTGGTGTCACTTCTaGGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTAC +
Preference number: 1 (lower is better)
Translates to: QWTSANALTRGWCHF*EERGEWGCYTRGLY
Trigger: GTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGAAGTGACACCAACCCCGTGTTAGAGCATTAGCAGATGTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
3UTR TCA 90 bp CCCCTCCCTCTCACACCCAGACTTGTCATCTCCACACTGGAGGAATaGGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCCATATTC +
Preference number: 1 (lower is better)
Translates to: PLPLTPRLVISTLEE*GGMAKNIASIKPIF
Trigger: GAATATGGGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAGATGACAAGTCTGGGTGTGAGAGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp GTGAAGGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTaGACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACC +
Preference number: 1 (lower is better)
Translates to: VKASQSSPSVGEAPL*TVRLVLNSLPRQLT
Trigger: GGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp AGGCCTGGAGGATGGGAGGATAGGAGACACTTCCAGAAGCCACACTaGCATAAGAACAGAATCTTCTCTTGGGAAGGCCAAGGGAAGTCA +
Preference number: 1 (lower is better)
Translates to: RPGGWEDRRHFQKPH*HKNRIFSWEGQGKS
Trigger: TGACTTCCCTTGGCCTTCCCAAGAGAAGATTCTGTTCTTATGTCAGTGTGGCTTCTGGAAGTGTCTCCTATCCTCCCATCCTCCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp GGAAGTGTCCCTCAAGGCCTGAGAGAGACCCACAGCACCAGATGCTaGATTTTACAAAACCACTTAGGTGCTGCCCAAATGGTGAGAAAT +
Preference number: 1 (lower is better)
Translates to: GSVPQGLRETHSTRC*ILQNHLGAAQMVRN
Trigger: ATTTCTCACCATTTGGGCAGCACCTAAGTGGTTTTGTAAAATGCAGCATCTGGTGCTGTGGGTCTCTCTCAGGCCTTGAGGGACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp ATTTCTACCACCCTAGCATGTCTGACAGAAAGCCCTGCTGGGCTCTaGGGTCCAGATGTCAACTCTACATTGGAGGAGGCAAAACACAAT +
Preference number: 1 (lower is better)
Translates to: ISTTLACLTESPAGL*GPDVNSTLEEAKHN
Trigger: ATTGTGTTTTGCCTCCTCCAATGTAGAGTTGACATCTGGACCCCAGAGCCCAGCAGGGCTTTCTGTCAGACATGCTAGGGTGGTAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp TGGAAGTGGGTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTaGTGTTTGTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCT +
Preference number: 1 (lower is better)
Translates to: WKWVTPMAHFSFMSF*CLFCIRHSIRSPES
Trigger: AGACTCTGGGGACCTGATGGAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTACCCACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 90 bp CTGAGAGATGAACGAGACACCTCAGTCATGGCACACTGGGTGGTGTaGTTCCCCTCCAAGTCCTGTCTTTGTTTTACACAGTCATATGAA +
Preference number: 1 (lower is better)
Translates to: LRDERDTSVMAHWVV*FPSKSCLCFTQSYE
Trigger: TTCATATGACTGTGTAAAACAAAGACAGGACTTGGAGGGGAAGCACACCACCCAGTGTGCCATGACTGAGGTGTCTCGTTCATCTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 90 bp TGTCTGGGAAGTTTGTCTGGAGTGTGCAGAAAGGTCAGGCTGGACTaGCTGTCACATCCTGAGACCACACTAAACCTTTATAAGCCATTG +
Preference number: 1 (lower is better)
Translates to: CLGSLSGVCRKVRLD*LSHPETTLNLYKPL
Trigger: CAATGGCTTATAAAGGTTTAGTGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGACAAACTTCCCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 90 bp ACTGTTCCCAAGAAGAGTAAGGACAGCATGAGACAGCCAAAGGCCTaGAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTCAC +
Preference number: 1 (lower is better)
Translates to: TVPKKSKDSMRQPKA*SVFKSIPAHSTLAH
Trigger: GTGAGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCCTTACTCTTCTTGGGAACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp TCTGGGTCCATCATCTCTGTCTCCTGCAGCTTAAATACTTTTTGGTaGCAGCGGGTGCTTAGCTGCTTCTTGTTTTCTTTCAGACATTCG +
Preference number: 1 (lower is better)
Translates to: SGSIISVSCSLNTFW*QRVLSCFLFSFRHS
Trigger: CGAATGTCTGAAAGAAAACAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGACAGAGATGATGGACCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 90 bp TGTCATCTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTaGTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAA +
Preference number: 1 (lower is better)
Translates to: CHLHTGGMRRDGQEY*FYKAHILQRLMNRQ
Trigger: TTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAGATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 90 bp TATACAGATGCTCCCACTGATCACAGAGAGAATGTAGTTCTTAGATaGAGACGTCATTACTTGCATGGCAAGATCAGAGAAGCCATCTGC +
Preference number: 1 (lower is better)
Translates to: YTDAPTDHRENVVLR*RRHYLHGKIREAIC
Trigger: GCAGATGGCTTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCATCTAAGAACTACATTCTCTCTGTGATCAGTGGGAGCATCTGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 90 bp GGGCACAAGCAGTATGAAGTACCGGGTCAACAAAGATGTCTGCTTTaGTTTCCTTCAGCATGTTTAGCACTTCCTTTTTACACAATTCTG +
Preference number: 1 (lower is better)
Translates to: GHKQYEVPGQQRCLL*FPSACLALPFYTIL
Trigger: CAGAATTGTGTAAAAAGGAAGTGCTAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTGTTGACCCGGTACTTCATACTGCTTGTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 90 bp ACACTAAACCTTTATAAGCCATTGTCTCTGACCTGTATTGTAGCCTaGAAAATAAAGCAAAGTGAGTCAAACCTCTGGCTCCCACTTCCT +
Preference number: 1 (lower is better)
Translates to: TLNLYKPLSLTCIVA*KIKQSESNLWLPLP
Trigger: AGGAAGTGGGAGCCAGAGGTTTGACTCACTTTGCTTTATTTTTCAGGCTACAATACAGGTCAGAGACAATGGCTTATAAAGGTTTAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 90 bp ATTCTGCAAAGGTTGATGAATCGCCAAAATACAACATTTAGCCAATaGCTACTAGAGTGGGTACACGCAGCAAATGGACAGAAAGAAAAA +
Preference number: 1 (lower is better)
Translates to: ILQRLMNRQNTTFSQ*LLEWVHAANGQKEK
Trigger: TTTTTCTTTCTGTCCATTTGCTGCGTGTACCCACTCTAGTAGGCATTGGCTAAATGTTGTATTTTGGCGATTCATCAACCTTTGCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 90 bp AGACAGATGTTTCAAGAACCAAATTCCTCATCAAACTTCCAAATCTaGAGACAACGAATGGGATTTTCTCTCAATTCAGAAAGAACAGAA +
Preference number: 1 (lower is better)
Translates to: RQMFQEPNSSSNFQI*RQRMGFSLNSERTE
Trigger: TTCTGTTCTTTCTGAATTGAGAGAAAATCCCATTCGTTGTCTGCAGATTTGGAAGTTTGATGAGGAATTTGGTTCTTGAAACATCTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 90 bp AAGGAAGCATTCTGGCCTTTCAGGTTTTTCAAACTCACAAGATGTTaGAATACAAGTAAATATACCAAAATGCACATAATTGAGGCCAAG +
Preference number: 1 (lower is better)
Translates to: KEAFWPFRFFKLTRC*NTSKYTKMHIIEAK
Trigger: CTTGGCCTCAATTATGTGCATTTTGGTATATTTACTTGTATTTCAACATCTTGTGAGTTTGAAAAACCTGAAAGGCCAGAATGCTTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAACTTGCTCGGGGCCCTaGCTGGGGCTCTCAAGAGCC +
Preference number: 2 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSATCSGP*LGLSRA
Trigger: GGCTCTTGAGAGCCCCAGGCAGGGCCCCGAGCAAGT...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATTGCCACGCTGAACCATaGTGCCCGGACCCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHCHAEP*CPDPSL
Trigger: GAGGGAGGGGTCCGGGCATCATGGTTCAGCGTGGCA...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGCACCCGGTCAAACAGTaGACATCCATCCTACCTGCA +
Preference number: 2 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLHPVKQ*TSILPA
Trigger: TGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTG...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAGCGACCAGCTGCTGCTaGTGCACGGTGAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPATSCC*CTVRRR
Trigger: CCTCCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGC...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATCCAGCGACCAGCTGCTaGTGCTGCACGGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHPATSC*CCTVRR
Trigger: CCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGG...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGGCTGTGACCAGCAGTaGCTGATTAGGGTGGAAACT +
Preference number: 2 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLGCDQQ*LIRVET
Trigger: AGTTTCCACCCTAATCAGCCACTGCTGGTCACAGCC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCTGCCACGCTGAACCATaGTGCCCGGACCCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSCHAEP*CPDPSL
Trigger: GAGGGAGGGGTCCGGGCATCATGGTTCAGCGTGGCA...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTCCACCCACGCCTCGGTaGAGACCACGGCCCTGGCGA +
Preference number: 2 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSPPTPR*RPRPWR
Trigger: TCGCCAGGGCCGTGGTCTTCACCGAGGCGTGGGTGG...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATGCCCGCGGCCAGGGGTaGTGGCTGCGCAGTGGTGTT +
Preference number: 2 (lower is better)
Translates to: GKIREAICWGHLCCVTPHARGQG*WLRSGV
Trigger: AACACCACTGCGCAGCCATCACCCCTGGCCGCGGGC...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGAGGGACTTAATGAGTaGGGCCAGTTCAGACTTTGC +
Preference number: 2 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLEGLNE*GQFRLC
Trigger: GCAAAGTCTGAACTGGCCGCACTCATTAAGTCCCTC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGTGGCTCCCCTGCCGGTaGTTCTTGCTAACGGGCTTG +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPWLPCR*FLLTGL
Trigger: CAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCA...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCGAAGTGGGCCACTTTaGGGCCACTTTGGAAGGCCG +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPRSGPL*GHFGRP
Trigger: CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGGCCGCTCACTCCGGCTaGCAGTGGCGGGAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMAAHSG*QWREAV
Trigger: CACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGC...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAGTGGTGGCGGGTGCCTaGAATCCCAGCTACTCAGGA +
Preference number: 2 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAVVAGA*NPSYSG
Trigger: TCCTGAGTAGCTGGGATTCCAGGCACCCGCCACCAC...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATCAACATGCACCCAGGTaGAGGCCTCACAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHQHAPR*RPHRAP
Trigger: GGGAGCTCTGTGAGGCCTTCACCTGGGTGCATGTTG...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGCTGCCTGTCACATCCTaGGACCACACTAAACCTTTA +
Preference number: 2 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLLPVTS*DHTKPL
Trigger: TAAAGGTTTAGTGTGGTCTCAGGATGTGACAGGCAG...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAGCACTTAGAAAAACTTaGTCGGGGCCCTGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAALRKT*SGPCLG
Trigger: CCCCAGGCAGGGCCCCGAGCAAGTTTTTCTAAGTGC...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGGCACTTAGAAAAACTTaGTCGGGGCCCTGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPALRKT*SGPCLG
Trigger: CCCCAGGCAGGGCCCCGAGCAAGTTTTTCTAAGTGC...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGTCCTCCACACGGAGCTaGCTGCGGCACTTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: PHPLILQCFHETGHLTPASSTRS*LRHFRD
Trigger: GTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGA...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTGGACCCCACACAGCCTaGGGAACGGCTGCCCACCCA +
Preference number: 2 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSGPHTA*GTAAHP
Trigger: TGGGTGGGCAGCCGTTCCCCAGGCTGTGTGGGGTCC...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAAGCAGCTTCCCTTGGTaGCTTGGCAGGGGGACAATC +
Preference number: 2 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPSSFPW*LGRGTI
Trigger: GATTGTCCCCCTGCCAAGTCACCAAGGGAAGCTGCT...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATAGCAGCTTCCCTTGGTaGCTTGGCAGGGGGACAATC +
Preference number: 2 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHSSFPW*LGRGTI
Trigger: GATTGTCCCCCTGCCAAGTCACCAAGGGAAGCTGCT...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCTGTCACCACCAGCCTaGGCAGACAGTCCCATCTTT +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPLSPPA*ADSPIF
Trigger: AAAGATGGGACTGTCTGCTCAGGCTGGTGGTGACAG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGCCCCCAGGGGAACCTaGAGAGACTCTCGGGCCGCT +
Preference number: 2 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALAPRGT*RDSRAA
Trigger: AGCGGCCCGAGAGTCTCTGCAGGTTCCCCTGGGGGC...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAAGTGCATGGCTCCCCTaGCGGTGCTTCTTGCTAACG +
Preference number: 2 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPSAWLP*RCFLLT
Trigger: CGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACT...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGCCAGCGACCAGCTGCTaGTGCTGCACGGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLPATSC*CCTVRR
Trigger: CCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGG...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAAAGGTCAGGCTGGACTaGCTGTCACATCCTGAGACC +
Preference number: 2 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAKVRLD*LSHPET
Trigger: GGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTT...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGCCGCTCACTCCGGCTaGCAGTGGCGGGAGGCAGTG +
Preference number: 2 (lower is better)
Translates to: HQESRHRPESIIHSHPQKAAHSG*QWREAV
Trigger: CACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGC...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCACGAGTGGAGGCTGGATaGGACAACGCAGTGGACATC +
Preference number: 2 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPRVEAG*DNAVDI
Trigger: GATGTCCACTGCGTTGTCCCATCCAGCCTCCACTCG...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CAA 90 bp GCAGGACCGAGGGGACTAAGCAGCTTAGCAGCTTCCCTTGGTGACTaGGCAGGGGGACAATCAGTTGGCTTCTGGAACCCACTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: AGPRGLSSLAASLGD*AGGQSVGFWNPLPP
Trigger: TGGAGGCAGTGGGTTCCAGAAGCCAACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAGCTGCTAAGCTGCTTAGTCCCCTCGGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CAA 90 bp AGGCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTaGGAAGGCCGAAGTGGGCACATCATGAGGTCAGGAGATGGAGAC +
Preference number: 2 (lower is better)
Translates to: RPKCTLAEVGHFAAT*EGRSGHIMRSGDGD
Trigger: GTCTCCATCTCCTGACCTCATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCATCCACACTGGAGGAATaGGGCGGGATGGCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPSTLEE*GGMAKN
Trigger: ATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGA...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCACCCGGTCAAACAGTaGACATCCATCCTACCTGCA +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPHPVKQ*TSILPA
Trigger: TGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATTGTTCTAGGGCTGGCTaGCTTCCAAGGTTCCTGGTC +
Preference number: 2 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHCSRAG*LPRFLV
Trigger: GACCAGGAACCTTGGAAGTCAGCCAGCCCTAGAACA...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTGCGGGAGGCAGTGTGTaGTGCTCGCACCCTGCGTTT +
Preference number: 2 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSAGGSV*CSHPAF
Trigger: AAACGCAGGGTGCGAGCAGCACACACTGCCTCCCGC...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTCCCAAGCCTATGGAGTaGATGGCTCCCCTGCCGGTG +
Preference number: 2 (lower is better)
Translates to: GLTELPICGRSSIVNSSSPKPME*MAPLPV
Trigger: CACCGGCAGGGGAGCCATGCACTCCATAGGCTTGGG...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp CTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCCTCCTCCACACGGAGCTaGCTGCGGCACTTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: LLQASYRSGSKRMSSVISSSTRS*LRHFRD
Trigger: GTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGA...GGAGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCACAATCAGTTGGCTTCTaGAACCCACTGCCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAQSVGF*NPLPPG
Trigger: TCCTGGAGGCAGTGGGTTCCAGAAGCCAACTGATTG...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCTTCCCTTGGTGACTTaGCAGGGGGACAATCAGTTG +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPLPLVT*QGDNQL
Trigger: CAACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCACTTCCCTTGGTGACTTaGCAGGGGGACAATCAGTTG +
Preference number: 2 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSALPLVT*QGDNQL
Trigger: CAACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAG...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGCTCGGGGCCCTGCCTaGGGCTCTCAAGAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: HQESRHRPESIIHSHPQKARGPA*GSQEPV
Trigger: GACTGGCTCTTGAGAGCCCCAGGCAGGGCCCCGAGC...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCACACAGGCCTGGAGGATaGGAGGATAGGAGACACTTC +
Preference number: 2 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPHRPGG*EDRRHF
Trigger: GAAGTGTCTCCTATCCTCCCATCCTCCAGGCCTGTG...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAATACATGTGTCCTGGTaGAGCAGAGGGAGCGGGAGA +
Preference number: 2 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPIHVSW*SRGSGR
Trigger: TCTCCCGCTCCCTCTGCTCCACCAGGACACATGTAT...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTGGGCCGGTCCAGACATaGCTGAGTCCTGTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIGPVQT*LSPVLP
Trigger: GGGCAGCACAGGACTCAGCCATGTCTGGACCGGCCC...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CAA 90 bp TGGTGGCTCACGCCTGTAATGCACTTTGGAAGGCCGAAGTGCACTTaGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGT +
Preference number: 2 (lower is better)
Translates to: WWLTPVMHFGRPKCT*AEVGHFAATLEGRS
Trigger: ACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCCTTCCAAAGTGCATTACAGGCGTGAGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CAA 90 bp CTCACACAGCATTTGCTGTACAGACTGTTTTCCGGATGGACTGGTTaGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGCTCCCGC +
Preference number: 2 (lower is better)
Translates to: LTQHLLYRLFSGWTG*GTLCWGKLPRKRSR
Trigger: GCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAACAGTCTGTACAGCAAATGCTGTGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCGAGGTTGCAGGGAGCTaGGATCGCGCCACTGCACTG +
Preference number: 2 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAEVAGS*DRATAL
Trigger: CAGTGCAGTGGCGCGATCTCAGCTCCCTGCAACCTC...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATTCTCAGCCAGTTGACTaGCCTATAAGGCCAGGAACC +
Preference number: 2 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHSQPVD*PIRPGT
Trigger: GGTTCCTGGCCTTATAGGTCAGTCAACTGGCTGAGA...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTTCGCTTTCCCGGGGGTaGTCCCAAGCCTATGGAGTG +
Preference number: 2 (lower is better)
Translates to: GLTELPICGRSSIVNSSSSLSRG*SQAYGV
Trigger: CACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGA...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGACTGGAGATCTCGTCTaGGCAGTGCAGCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVTGDLV*AVQLEL
Trigger: CAGCTCCAGCTGCACTGCTCAGACGAGATCTCCAGT...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATTCATCCAGATGGTCCTaGAGGCACTCCAGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADSSRWS*RHSSSC
Trigger: ACAGGAGCTGGAGTGCCTTCAGGACCATCTGGATGA...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567951.5
3UTR-3UTR GCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCACACTGCTCTCTTGTaGAGCCACTGTGATCTCATG +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPHTALL*SHCDLM
Trigger: CATGAGATCACAGTGGCTGCACAAGAGAGCAGTGTG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCAGTGCACGTGGACTGTaGAGAGCAGAGGCAAGAGTG +
Preference number: 2 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSSARGL*RAEARV
Trigger: CACTCTTGCCTCTGCTCTGCACAGTCCACGTGCACT...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCAGGCGTGGTGGCGGGTaGCTGGAATCCCAGCTACTC +
Preference number: 2 (lower is better)
Translates to: SPSFEGCTNTELQLGVVARRGGG*LESQLL
Trigger: GAGTAGCTGGGATTCCAGGCACCCGCCACCACGCCT...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCACCCCAGCGACCAGCTaGTGCTGCTGCACGGTGAGG +
Preference number: 2 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSTPATS*CCCTVR
Trigger: CCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGGGGT...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGGATCCAGCCTCTCAGTaGAGATGGATGGACTGTTCA +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPDPASQ*RWMDCS
Trigger: TGAACAGTCCATCCATCTGCACTGAGAGGCTGGATC...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGAGGTTCCTGGGATCCTaGTGCCCCGGGACTCAGGAT +
Preference number: 2 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMRFLGS*CPGTQD
Trigger: ATCCTGAGTCCCGGGGCAGCAGGATCCCAGGAACCT...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACACTCCGGCTGGCAGTaGCGGGAGGCAGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSHSGWQ*REAVCA
Trigger: AGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTG...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGCACTCCGGCTGGCAGTaGCGGGAGGCAGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: HQESRHRPESIIHSHPQKHSGWQ*REAVCA
Trigger: AGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTG...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGTCTGCAGACAACGAATaGGATTTTCTCTCAATTCAG +
Preference number: 2 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLSADNE*DFLSIQ
Trigger: CTGAATTGAGAGAAAATCCCATTCGTTGTCTGCAGA...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGAGGAGGAAGGTTCCTaGGATCCTGCTGCCCCGGGA +
Preference number: 2 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALEEEGS*DPAAPG
Trigger: TCCCGGGGCAGCAGGATCCCAGGAACCTTCCTCCTC...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATTGGCCTCTCCCCAGATaGCTCACTATAGTAGGAACT +
Preference number: 2 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHWPLPR*LTIVGT
Trigger: AGTTCCTACTATAGTGAGTCATCTGGGGAGAGGCCA...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGCTGAGAAGAGCGAGGTaGGTGGGGATGCTATACAAG +
Preference number: 2 (lower is better)
Translates to: PHPLILQCFHETGHLTPALRRAR*VGMLYK
Trigger: CTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAG...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGGGCTCTACCTGTCCTTaGGCTCTCGTGTCACTCGCT +
Preference number: 2 (lower is better)
Translates to: EWRLDGTTQWTSANALTRGSTCP*ALVSLA
Trigger: AGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCC...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGAGTGCATGGCTCCCCTaGCGGTGCTTCTTGCTAACG +
Preference number: 2 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMSAWLP*RCFLLT
Trigger: CGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACT...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGCGAGGTGAGTGGGGATaGTATACAAGAGGGCTGTAC +
Preference number: 2 (lower is better)
Translates to: PHPLILQCFHETGHLTPARGEWG*YTRGLY
Trigger: GTACAGCCCTCTTGTATAGCATCCCCACTCACCTCG...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCGAGGTGAGTGGGGATaGTATACAAGAGGGCTGTAC +
Preference number: 2 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADRGEWG*YTRGLY
Trigger: GTACAGCCCTCTTGTATAGCATCCCCACTCACCTCG...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATAGTTTGTCTGGAGTGTaGAGAAAGGTCAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHSLSGV*RKVRLD
Trigger: GTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGCCTGCAGAGTGTCATTaGGCACGGTCGTGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALPAECH*ARSCSG
Trigger: GCCTGAGCACGACCGTGCGCAATGACACTCTGCAGG...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCCAATCAGTTGGCTTCTaGAACCCACTGCCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSQSVGF*NPLPPG
Trigger: TCCTGGAGGCAGTGGGTTCCAGAAGCCAACTGATTG...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGGCCTGTAATGCACTTTaGAAGGCCGAAGTGCACTTT +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPACNAL*KAEVHF
Trigger: AAAGTGCACTTCGGCCTTCCAAAGTGCATTACAGGC...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATGAAGAGCGAGGTGAGTaGGGATGCTATACAAGAGGG +
Preference number: 2 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADEERGE*GCYTRG
Trigger: CCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGCGAGTGGAGGCTGGATaGGACAACGCAGTGGACATC +
Preference number: 2 (lower is better)
Translates to: EWRLDGTTQWTSANALTRRVEAG*DNAVDI
Trigger: GATGTCCACTGCGTTGTCCCATCCAGCCTCCACTCG...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCGACACGAGTGGAGGCTaGATGGGACAACGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHIDTSGG*MGQRSG
Trigger: TCCACTGCGTTGTCCCATCCAGCCTCCACTCGTGTC...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATCACCATGGACACGAGTaGAGGCTGGATGGGACAACG +
Preference number: 2 (lower is better)
Translates to: GKIREAICWGHLCCVTPHHHGHE*RLDGTT
Trigger: CGTTGTCCCATCCAGCCTCCACTCGTGTCCATGGTG...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACAAGGAGGAGGACACCATaGACACGAGTGGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTRRRTP*TRVEAG
Trigger: TCCAGCCTCCACTCGTGTCCATGGTGTCCTCCTCCT...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp GGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCTCCCCAGAGTCTATCTaGTTATCTGCCACATCGTGG +
Preference number: 2 (lower is better)
Translates to: GFLQSVIAHGRAQADHHVSPESI*LSATSW
Trigger: CCACGATGTGGCAGATAACCAGATAGACTCTGGGGA...GACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CAA 90 bp CTATGGAGTGCATGGCTCCCCTGCCGGTGCTTCTTGCTAACGGGCTaGTCTAGGGACAACAGCAACAGCAATGGAAGTCCAACATGCACC +
Preference number: 2 (lower is better)
Translates to: LWSAWLPCRCFLLTG*SRDNSNSNGSPTCT
Trigger: GGTGCATGTTGGACTTCCATTGCTGTTGCTGTTGTCCCTAGACAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACTCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCATCCCAGACAGCTGTTaGCAATCAGGAAGACCCTAC +
Preference number: 2 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSIPDSC*QSGRPY
Trigger: GTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGAT...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGGTGTCCCTCAAGGCCTaGGAGAGACCCACAGCACCA +
Preference number: 2 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLVSLKA*ERPTAP
Trigger: TGGTGCTGTGGGTCTCTCTCAGGCCTTGAGGGACAC...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGTGCAGTTAGAGGGATaGGCAACCAAAGACCAATGG +
Preference number: 2 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSVQLEG*ATKDQW
Trigger: CCATTGGTCTTTGGTTGCTCATCCCTCTAACTGCAC...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACGGTTGGTGTCACTTCTaGGAAGAGCGAGGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNGWCHF*EERGEW
Trigger: CCACTCACCTCGCTCTTCTCAGAAGTGACACCAACC...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAGGAGGCAGTGTGTGCTaGTCGCACCCTGCGTTTCCA +
Preference number: 2 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSGGSVC*SHPAFP
Trigger: TGGAAACGCAGGGTGCGAGCAGCACACACTGCCTCC...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCAATGGAAGTCCAACATaGACCCAGGTGAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSNGSPT*TQVKAS
Trigger: TGAGGCCTTCACCTGGGTGCATGTTGGACTTCCATT...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGGCGACCAGCTGCTGCTaGTGCACGGTGAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRATSCC*CTVRRR
Trigger: CCTCCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGC...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGCCAGCGACCAGCTGCTaGTGCTGCACGGTGAGGAGG +
Preference number: 2 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRPATSC*CCTVRR
Trigger: CCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGG...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGTTCCTGGGATCCTGCTaGCCCGGGACTCAGGATCCA +
Preference number: 2 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLFLGSC*PGTQDP
Trigger: TGGATCCTGAGTCCCGGGGCAGCAGGATCCCAGGAA...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTCCCGCCACAGTCCTaGCTCCTGATGAAGCGCAGA +
Preference number: 2 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLLPPQS*LLMKRR
Trigger: TCTGCGCTTCATCAGGAGGCAGGACTGTGGCGGGAG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGCATTGCGCACGGTCGTaGTCAGGCAGATCACCACGT +
Preference number: 2 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALHCARS*SGRSPR
Trigger: ACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATG...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCAGTGCAGCTTGCTCCTTGGCTTCCTaGAGAGTGTCATTGCGCACG +
Preference number: 2 (lower is better)
Translates to: GLLLLQHIDWRSRLSSAACSLAS*RVSLRT
Trigger: CGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCA...AGCTGCACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAAGCCTATGGAGTGCATaGCTCCCCTGCCGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSSLWSA*LPCRCF
Trigger: GAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCT...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGGTACAAACTGGGCACTaGATAGGTAGTTCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPVQTGH*IGSSFG
Trigger: ACCAAAGGAACTACCTATCCAGTGCCCAGTTTGTAC...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGTTCATCTGCACCAGCTaGAAGTGGGTAACTCCGATG +
Preference number: 2 (lower is better)
Translates to: PHPLILQCFHETGHLTPAFICTS*KWVTPM
Trigger: CATCGGAGTTACCCACTTCCAGCTGGTGCAGATGAA...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGAGGCAGAGAATTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMRQRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAATTCTCTGCCT...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTGGTTGGTGTCACTTCTaGGAAGAGCGAGGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSGWCHF*EERGEW
Trigger: CCACTCACCTCGCTCTTCTCAGAAGTGACACCAACC...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp GTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCGCTGCTGCTGCACGGTaGGGAGGAGGAGGACACCAT +
Preference number: 2 (lower is better)
Translates to: VFWVIWRLVIICLHLGSIAAAAR*GGGGHH
Trigger: ATGGTGTCCTCCTCCTCCTCACCGTGCAGCAGCAGC...GATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTGTGACCAGCAGTGGCTaGTTAGGGTGGAAACTGGAA +
Preference number: 2 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSVTSSG*LGWKLE
Trigger: TTCCAGTTTCCACCCTAATCAGCCACTGCTGGTCAC...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGTCGTGGCAGAAGTTCTaGATTATGGGCTCACAGGCT +
Preference number: 2 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVSWQKF*IMGSQA
Trigger: AGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGA...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCGGAGGCAGTGTGTGCTaGTCGCACCCTGCGTTTCCA +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGGGSVC*SHPAFP
Trigger: TGGAAACGCAGGGTGCGAGCAGCACACACTGCCTCC...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATCCTAGCTTTGAAGGATaGACTAACACAGAACTGCAG +
Preference number: 2 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHPSFEG*TNTELQ
Trigger: CTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGG...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCGGTTTGGGAACACTGTaGTGGGGGAAGCTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGGLGTL*WGKLPR
Trigger: CCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACC...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGCGAAAATCCTTCATCTaGACCAGCTGGAAGTGGGTA +
Preference number: 2 (lower is better)
Translates to: PHPLILQCFHETGHLTPARKSFI*TSWKWV
Trigger: TACCCACTTCCAGCTGGTGCAGATGAAGGATTTTCG...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCCACCGTACAAACTGGGCACTaGATAGGTAGTTCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: SCRVSLRTVVLRQITTSTVQTGH*IGSSFG
Trigger: ACCAAAGGAACTACCTATCCAGTGCCCAGTTTGTAC...GGTGGACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGAAGAGCGAGGTGAGTaGGGATGCTATACAAGAGGG +
Preference number: 2 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLEERGE*GCYTRG
Trigger: CCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAATCATGGCACACTGGGTaGTGTGCTTCCCCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: FTHTGKETAERKDTPPGQSWHTG*CASPPS
Trigger: ACTTGGAGGGGAAGCACACCACCCAGTGTGCCATGA...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCCCACAGAAATACCCATaGCTGTGGGGCTGTGACCAG +
Preference number: 2 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAPQKYP*LWGCDQ
Trigger: CTGGTCACAGCCCCACAGCCATGGGTATTTCTGTGG...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCGCAGAAAGGTCAGGCTaGACTGCCTGTCACATCCTG +
Preference number: 2 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAAERSG*TACHIL
Trigger: CAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGC...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTTGCACCAGCTGGAAGTaGGTAACTCCGATGGCACAC +
Preference number: 2 (lower is better)
Translates to: LHGKIREAICWGHLCCVTCTSWK*VTPMAH
Trigger: GTGTGCCATCGGAGTTACCCACTTCCAGCTGGTGCA...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CAA 90 bp CCCTGCGTTTCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTaGACAATCAGGAAGACCCTACAAGCAGGACCGAGGGGACTAAGC +
Preference number: 2 (lower is better)
Translates to: PCVSSFRRLKHPRQL*TIRKTLQAGPRGLS
Trigger: GCTTAGTCCCCTCGGTCCTGCTTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGAAACGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCCCCTGGCCAGCTGAGTaGCTCACTGTTCCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGPWPAE*LTVPKK
Trigger: CTTCTTGGGAACAGTGAGTCACTCAGCTGGCCAGGG...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCCTGAGAAGAGCGAGGTaGGTGGGGATGCTATACAAG +
Preference number: 2 (lower is better)
Translates to: SDTPSGPQSLSGYLPHRGLRRAR*VGMLYK
Trigger: CTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAG...GCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGAATCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCA +
Preference number: 2 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVNLCSG*SGAWLS
Trigger: TGATAACCAAGCGCCAGATCACCCAGAACACAGATT...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTTCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCGG +
Preference number: 2 (lower is better)
Translates to: LHGKIREAICWGHLCCVTSQSGH*GAFCTR
Trigger: CCGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGA...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTGCCACTGTGATCTCATaGCCCAAACTCAACCAAAGG +
Preference number: 2 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSATVIS*PKLNQR
Trigger: CCTTTGGTTGAGTTTGGGGCATGAGATCACAGTGGC...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAAAGTGCACGTGGACTGTaGAGAGCAGAGGCAAGAGTG +
Preference number: 2 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQSARGL*RAEARV
Trigger: CACTCTTGCCTCTGCTCTGCACAGTCCACGTGCACT...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCGTGTCGCTCCGGTCCTaGAGTGCACGTGGACTGTGC +
Preference number: 2 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFVSLRS*SARGLC
Trigger: GCACAGTCCACGTGCACTGCAGGACCGGAGCGACAC...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGGCTTCTGGAACCCACTaGCTCCAGGAAGGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMASGTH*LQEGQQ
Trigger: TTGCTGCCCTTCCTGGAGGCAGTGGGTTCCAGAAGC...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGCCCCCAGGGGAACCTaGAGAGACTCTCGGGCCGCT +
Preference number: 2 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSAPRGT*RDSRAA
Trigger: AGCGGCCCGAGAGTCTCTGCAGGTTCCCCTGGGGGC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCGCTGAGGCAGAGAATTaGTTGAACCCAGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFAEAEN*LNPGGG
Trigger: TCCACCTCCTGGGTTCAAGCAATTCTCTGCCTCAGC...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAGGCCCTGTTTTGTTTTaGCAAATGAGGGACTTAATG +
Preference number: 2 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPGPVLF*QMRDLM
Trigger: CATTAAGTCCCTCATTTGGCAAAACAAAACAGGGCC...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGAATGGAAGTCCAACATaGACCCAGGTGAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMNGSPT*TQVKAS
Trigger: TGAGGCCTTCACCTGGGTGCATGTTGGACTTCCATT...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGTTTGGTGGCAGCGGGTaGTTAGCTGCTTCTTGTTTT +
Preference number: 2 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVFGGSG*LAASCF
Trigger: AAAACAAGAAGCAGCTAAGCACCCGCTGCCACCAAA...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGCCGCTTATCCTCCAGTaGTTCCATGAGACAGGACAT +
Preference number: 2 (lower is better)
Translates to: EWRLDGTTQWTSANALTRPLILQ*FHETGH
Trigger: ATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGG...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTTGTCATCTCCACACTaGAGGAATGAGGCGGGATGG +
Preference number: 2 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALLSSPH*RNEAGW
Trigger: CCATCCCGCCTCATTCCTCCAGTGTGGAGATGACAA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp TGGCTGATTAGGGTGGAAACTGGAAAGCGTCACTGTCTCAGCAGAAGAAAGCAGGACACGAGTGGAGGCTaGATGGGACAACGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: WLIRVETGKRHCLSRRKQDTSGG*MGQRSG
Trigger: TCCACTGCGTTGTCCCATCCAGCCTCCACTCGTGTC...CTGCTTTCTTCTGCTGAGACAGTGACGCTTTCCAGTTTCCACCCTAATCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp GTCTCCTGCAGCTTAAATACTTTTTGGTGGCAGCGGGTGCTTAGCTGCTTCTTGAGGAGGAGGACACCATaGACACGAGTGGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: VSCSLNTFWWQRVLSCFLRRRTP*TRVEAG
Trigger: TCCAGCCTCCACTCGTGTCCATGGTGTCCTCCTCCT...CAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCTCAGTCATGGCACACTaGGTGGTGTGCTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGSVMAH*VVCFPS
Trigger: GGAGGGGAAGCACACCACCCAGTGTGCCATGACTGA...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGAAATACCCATGGCTGTaGGGCTGTGACCAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLKYPWL*GCDQQW
Trigger: CCACTGCTGGTCACAGCCCCACAGCCATGGGTATTT...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGTTCATCTGCACCAGCTaGAAGTGGGTAACTCCGATG +
Preference number: 2 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLFICTS*KWVTPM
Trigger: CATCGGAGTTACCCACTTCCAGCTGGTGCAGATGAA...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCTGAAGACAGGCGCTaGTCAGCATATCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNSEDRR*SAYLSF
Trigger: GAAGCTGAGATATGCTGACCAGCGCCTGTCTTCAGA...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp GGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCAGTGCAGCTTCTGAAGACAGGCGCTaGTCAGCATATCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GLLLLQHIDWRSRLSSAASEDRR*SAYLSF
Trigger: GAAGCTGAGATATGCTGACCAGCGCCTGTCTTCAGA...AGCTGCACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CAA 90 bp TGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTaGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATATACAG +
Preference number: 2 (lower is better)
Translates to: WSRWLYLSLSSRVTR*VIRPHIRPIRNNIQ
Trigger: CTGTATATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCAAAGGAGTGCCACGCTaGACCATGATGCCCGGACCC +
Preference number: 2 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFKGVPR*TMMPGP
Trigger: GGGTCCGGGCATCATGGTTCAGCGTGGCACTCCTTT...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCCAACATGCACCCAGGTaGAGGCCTCACAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFQHAPR*RPHRAP
Trigger: GGGAGCTCTGTGAGGCCTTCACCTGGGTGCATGTTG...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCGGTTGGTGTCACTTCTaGGAAGAGCGAGGTGAGTGG +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGGWCHF*EERGEW
Trigger: CCACTCACCTCGCTCTTCTCAGAAGTGACACCAACC...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGAGTTGCAGGTCAGGTaGGTTGGTTCTGGAAGTACC +
Preference number: 2 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWELQVR*VGSGST
Trigger: GGTACTTCCAGAACCAACTCACCTGACCTGCAACTC...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTTCGTGGCAGAAGTTCTaGATTATGGGCTCACAGGCT +
Preference number: 2 (lower is better)
Translates to: LHGKIREAICWGHLCCVTSWQKF*IMGSQA
Trigger: AGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGA...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTTGGCTCCCCTGCCGGTaGTTCTTGCTAACGGGCTTG +
Preference number: 2 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLWLPCR*FLLTGL
Trigger: CAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCA...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAAGCGACCAGCTGCTGCTaGTGCACGGTGAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: FFQTFDNLSVAILHSGTEATSCC*CTVRRR
Trigger: CCTCCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGC...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp CTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCCCGAAAATCCTTCATCTaGACCAGCTGGAAGTGGGTA +
Preference number: 2 (lower is better)
Translates to: LLQASYRSGSKRMSSVISRKSFI*TSWKWV
Trigger: TACCCACTTCCAGCTGGTGCAGATGAAGGATTTTCG...GGAGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTGGTGTTTACGCATACTaGGAAGGAGACTGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIGVYAY*EGDCRE
Trigger: CTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACC...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTGTGGTGGCGGGTGCCTaGAATCCCAGCTACTCAGGA +
Preference number: 2 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFVVAGA*NPSYSG
Trigger: TCCTGAGTAGCTGGGATTCCAGGCACCCGCCACCAC...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTCAACAGCAACAGCAATaGAAGTCCAACATGCACCCA +
Preference number: 2 (lower is better)
Translates to: GLTELPICGRSSIVNSSSQQQQQ*KSNMHP
Trigger: TGGGTGCATGTTGGACTTCCATTGCTGTTGCTGTTG...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCCTAAAGATTCGGTCTaGTTTGCTAATGACTTATCT +
Preference number: 2 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPPKDSV*FANDLS
Trigger: AGATAAGTCATTAGCAAACCAGACCGAATCTTTAGG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAATGTCAACTCTACATTaGAGGAGGCAAAACACAATC +
Preference number: 2 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPMSTLH*RRQNTI
Trigger: GATTGTGTTTTGCCTCCTCCAATGTAGAGTTGACAT...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAAGAAGAGCGAGGTGAGTaGGGATGCTATACAAGAGGG +
Preference number: 2 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQEERGE*GCYTRG
Trigger: CCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGCACCATGGACACGAGTaGAGGCTGGATGGGACAACG +
Preference number: 2 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRHHGHE*RLDGTT
Trigger: CGTTGTCCCATCCAGCCTCCACTCGTGTCCATGGTG...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp GTCTCCTGCAGCTTAAATACTTTTTGGTGGCAGCGGGTGCTTAGCTGCTTCTTGTGCACCAGCTGGAAGTaGGTAACTCCGATGGCACAC +
Preference number: 2 (lower is better)
Translates to: VSCSLNTFWWQRVLSCFLCTSWK*VTPMAH
Trigger: GTGTGCCATCGGAGTTACCCACTTCCAGCTGGTGCA...CAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCCTTCAGCACATAGACTaGAGATCTCGTCTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHILQHID*RSRLSS
Trigger: ACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAG...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CAA 90 bp TGTGATAACTTTCCACACCCTCTCCACGTAGAGGCACAAAGGAGCTaGTCTGGGAAGTTTGTCTGGAGTGTGCAGAAAGGTCAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: CDNFPHPLHVEAQRS*SGKFVWSVQKGQAG
Trigger: TCCAGCCTGACCTTTCTGCACACTCCAGACAAACTTCCCAGACAAGCTCCTTTGTGCCTCTACGTGGAGAGGGTGTGGAAAGTTATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGTCCACACTGGAGGAATaGGGCGGGATGGCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQSTLEE*GGMAKN
Trigger: ATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGA...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGATCCCAGACAGCTGTTaGCAATCAGGAAGACCCTAC +
Preference number: 2 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLIPDSC*QSGRPY
Trigger: GTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGAT...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCGCACCTCCATGTACATaGCATTCCTGGCTCTTGATA +
Preference number: 2 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAAPPCT*HSWLLI
Trigger: TATCAAGAGCCAGGAATGTCATGTACATGGAGGTGC...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCGCACCTCCATGTACATaGCATTCCTGGCTCTTGATA +
Preference number: 2 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTAPPCT*HSWLLI
Trigger: TATCAAGAGCCAGGAATGTCATGTACATGGAGGTGC...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGAGCTACTCAGGAGGCTaGGGCAGAGAATTGCTTGAA +
Preference number: 2 (lower is better)
Translates to: HQESRHRPESIIHSHPQKSYSGG*GRELLE
Trigger: TTCAAGCAATTCTCTGCCTCAGCCTCCTGAGTAGCT...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCCTGTTAGCAAGTACCTaGAGCCTTAGCCTTGGCAAA +
Preference number: 2 (lower is better)
Translates to: SPSFEGCTNTELQLGVVALLAST*SLSLGK
Trigger: TTTGCCAAGGCTAAGGCTTCAGGTACTTGCTAACAG...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCAGCCTGGCAACGGAGTaGGACTCCATCTCAGAAACA +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGSLATE*DSISET
Trigger: TGTTTCTGAGATGGAGTCTCACTCCGTTGCCAGGCT...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTCATGCTTTGCTTCAATaGAGCGAGGAGACCACAGAA +
Preference number: 2 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTHALLQ*SEETTE
Trigger: TTCTGTGGTCTCCTCGCTTCATTGAAGCAAAGCATG...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGTTAGTCAGGATACCGTaGCAGAATTTAGGAATGTCA +
Preference number: 2 (lower is better)
Translates to: PHPLILQCFHETGHLTPALVRIP*QNLGMS
Trigger: TGACATTCCTAAATTCTGTCACGGTATCCTGACTAA...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCTCCTACTGTACACACTaGTCTCTTGTGCAGCCACTG +
Preference number: 2 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSSYCTH*SLVQPL
Trigger: CAGTGGCTGCACAAGAGAGCAGTGTGTACAGTAGGA...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAGCTTCTGGAACCCACTaGCTCCAGGAAGGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQASGTH*LQEGQQ
Trigger: TTGCTGCCCTTCCTGGAGGCAGTGGGTTCCAGAAGC...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTGTGGCGCACACTATaGATAAGTCACAGGGACACT +
Preference number: 2 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSLWRTL*ISHRDT
Trigger: AGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAG...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTCCTAGCTTTGAAGGATaGACTAACACAGAACTGCAG +
Preference number: 2 (lower is better)
Translates to: GLTELPICGRSSIVNSSSPSFEG*TNTELQ
Trigger: CTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGG...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGCGAGGTGAGTGGGGATaGTATACAAGAGGGCTGTAC +
Preference number: 2 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMRGEWG*YTRGLY
Trigger: GTACAGCCCTCTTGTATAGCATCCCCACTCACCTCG...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTGCACACTGGGTGGTGTaGTTCCCCTCCAAGTCCTGT +
Preference number: 2 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFAHWVV*FPSKSC
Trigger: ACAGGACTTGGAGGGGAAGCACACCACCCAGTGTGC...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTGGGGCCACCTTTGCTaGGTAACTCCACATCTCAAT +
Preference number: 2 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWWGHLC*VTPHLN
Trigger: ATTGAGATGTGGAGTTACGCAGCAAAGGTGGCCCCA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACGGAGACGTCATTACTTaGATGGCAAGATCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNGDVIT*MARSEK
Trigger: CTTCTCTGATCTTGCCATGCAAGTAATGACGTCTCC...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCCAATGCCTACTAGAGTaGGTACACGCAGCAAATGGA +
Preference number: 2 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFQCLLE*VHAANG
Trigger: TCCATTTGCTGCGTGTACCCACTCTAGTAGGCATTG...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATGTACAAACTGGGCACTaGATAGGTAGTTCCTTTGGT +
Preference number: 2 (lower is better)
Translates to: GKIREAICWGHLCCVTPHVQTGH*IGSSFG
Trigger: ACCAAAGGAACTACCTATCCAGTGCCCAGTTTGTAC...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAACACCATGGACACGAGTaGAGGCTGGATGGGACAACG +
Preference number: 2 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQHHGHE*RLDGTT
Trigger: CGTTGTCCCATCCAGCCTCCACTCGTGTCCATGGTG...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCTCCCCAGAGTCTATCTaGTTATCTGCCACATCGTGG +
Preference number: 2 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSSPESI*LSATSW
Trigger: CCACGATGTGGCAGATAACCAGATAGACTCTGGGGA...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATTCGTTCATGTCCTTCTaGTGTTTGTTCTGTATCAGA +
Preference number: 2 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADSFMSF*CLFCIR
Trigger: TCTGATACAGAACAAACACCAGAAGGACATGAACGA...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCTTAAATACTTTTTGGTaGCAGCGGGTGCTTAGCTGC +
Preference number: 2 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHILNTFW*QRVLSC
Trigger: GCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAA...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGCTTAAATACTTTTTaGTGGCAGCGGGTGCTTAGC +
Preference number: 2 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHISLNTF*WQRVLS
Trigger: GCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCT...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTCTTCAGCACATAGACTaGAGATCTCGTCTGAGCAGT +
Preference number: 2 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTLQHID*RSRLSS
Trigger: ACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAG...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CAA 90 bp AGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTaGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAG +
Preference number: 2 (lower is better)
Translates to: RAPHLWEKLHCEQFV*FLIVCPDSSPSVPQ
Trigger: CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CAA 90 bp TGGGTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTaGTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGG +
Preference number: 2 (lower is better)
Translates to: WVTPMAHFSFMSFWC*FCIRHSIRSPESIW
Trigger: CCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCAATCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCA +
Preference number: 2 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSNLCSG*SGAWLS
Trigger: TGATAACCAAGCGCCAGATCACCCAGAACACAGATT...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGACAACATTTAGCCAATaGCTACTAGAGTGGGTACAC +
Preference number: 2 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMTTFSQ*LLEWVH
Trigger: GTGTACCCACTCTAGTAGGCATTGGCTAAATGTTGT...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACCAGCTGGAAGTGGGTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGGTCTATCTGGTTATCTaGCACATCGTGGCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: TSWKWVTPMAHFSFMSFWVYLVI*HIVAEV
Trigger: AACTTCTGCCACGATGTGGCAGATAACCAGATAGAC...CCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTACCCACTTCCAGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACACAAAGGAGCTTGTCTaGGAAGTTTGTCTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: CWWATHQESRHRPESIIHTKELV*EVCLEC
Trigger: ACACTCCAGACAAACTTCCCAGACAAGCTCCTTTGT...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp TCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATGTGTTCTGGGTGATCTaGCGCTTGGTTATCATCTGT +
Preference number: 2 (lower is better)
Translates to: SRVTRLVIRPHIRPIRNNVFWVI*RLVIIC
Trigger: ACAGATGATAACCAAGCGCCAGATCACCCAGAACAC...ATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGAGGCTTTTCTTAACATaGGGTTTAAGCGGTAATCTG +
Preference number: 2 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVRLFLT*GLSGNL
Trigger: CAGATTACCGCTTAAACCCCATGTTAAGAAAAGCCT...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTAGGCAGAGAATTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: STLEEAKHNLEALSELSPRQRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAATTCTCTGCCT...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCTCTCAGCCAGTTGACTaGCCTATAAGGCCAGGAACC +
Preference number: 2 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFSQPVD*PIRPGT
Trigger: GGTTCCTGGCCTTATAGGTCAGTCAACTGGCTGAGA...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTAGAGTAAGGACAGCATaGGACAGCCAAAGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLRVRTA*DSQRPA
Trigger: TGCAGGCCTTTGGCTGTCTCATGCTGTCCTTACTCT...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGGGTGCTTCTGAGAGATaGACGAGACACCTCAGTCAT +
Preference number: 2 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQGASER*TRHLSH
Trigger: ATGACTGAGGTGTCTCGTTCATCTCTCAGAAGCACC...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTAAAAATAAAGCAAAGTaGGTCAAACCTCTGGCTCCC +
Preference number: 2 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIKNKAK*VKPLAP
Trigger: GGGAGCCAGAGGTTTGACTCACTTTGCTTTATTTTT...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTACAGATGCTCCCACTaGTCACAGAGAGAATGTAGT +
Preference number: 2 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWYRCSH*SQRECS
Trigger: ACTACATTCTCTCTGTGATCAGTGGGAGCATCTGTA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGAACATCCATCCTACCTaGAAACCACACCAGGCACGT +
Preference number: 2 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQNIHPT*KPHQAR
Trigger: ACGTGCCTGGTGTGGTTTGCAGGTAGGATGGATGTT...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTGCTGAGGCAGAGAATTaGTTGAACCCAGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFAEAEN*LNPGGG
Trigger: TCCACCTCCTGGGTTCAAGCAATTCTCTGCCTCAGC...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGGAGGGACTTAATGAGTaGGGCCAGTTCAGACTTTGC +
Preference number: 2 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQEGLNE*GQFRLC
Trigger: GCAAAGTCTGAACTGGCCGCACTCATTAAGTCCCTC...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTTTGTCATCTCCACACTaGAGGAATGAGGCGGGATGG +
Preference number: 2 (lower is better)
Translates to: STLEEAKHNLEALSELSPLSSPH*RNEAGW
Trigger: CCATCCCGCCTCATTCCTCCAGTGTGGAGATGACAA...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTGCCGAGGGCAGGCCTTaGTCTACATGGACAGTTTTA +
Preference number: 2 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFAEGRP*STWTVL
Trigger: TAAAACTGTCCATGTAGACCAAGGCCTGCCCTCGGC...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGGGTGTTTACGCATACTaGGAAGGAGACTGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQGVYAY*EGDCRE
Trigger: CTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACC...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTTCTATTACTGTTGGTaGGCTACACATCAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: CWWATHQESRHRPESIIHFYYCW*ATHQES
Trigger: ACTCTCCTGATGTGTAGCCCACCAACAGTAATAGAA...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTACTTCTATTACTGTTaGTGGGCTACACATCAGGAG +
Preference number: 2 (lower is better)
Translates to: CWWATHQESRHRPESIIHYFYYC*WATHQE
Trigger: CTCCTGATGTGTAGCCCACCAACAGTAATAGAAGTA...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTACCTCTAGAGGGCTGTaGCGCACACTATGCATAAGT +
Preference number: 2 (lower is better)
Translates to: QPKACSVFKSIPAHSTLATSRGL*RTLCIS
Trigger: ACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAACGAGTGGAGGCTGGATaGGACAACGCAGTGGACATC +
Preference number: 2 (lower is better)
Translates to: FFQTFDNLSVAILHSGTERVEAG*DNAVDI
Trigger: GATGTCCACTGCGTTGTCCCATCCAGCCTCCACTCG...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAAGACACGAGTGGAGGCTaGATGGGACAACGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: FFQTFDNLSVAILHSGTEDTSGG*MGQRSG
Trigger: TCCACTGCGTTGTCCCATCCAGCCTCCACTCGTGTC...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAAAGGAGGAGGACACCATaGACACGAGTGGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: FFQTFDNLSVAILHSGTERRRTP*TRVEAG
Trigger: TCCAGCCTCCACTCGTGTCCATGGTGTCCTCCTCCT...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGTGCCCAAATCAAGCCTaGAGGAGATGCGTTACTATA +
Preference number: 2 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLCPNQA*RRCVTI
Trigger: TATAGTAACGCATCTCCTCCAGGCTTGATTTGGGCA...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp TCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATAGCTTAAATACTTTTTaGTGGCAGCGGGTGCTTAGC +
Preference number: 2 (lower is better)
Translates to: SRVTRLVIRPHIRPIRNNSLNTF*WQRVLS
Trigger: GCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCT...ATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CAA 90 bp ACTGATCACAGAGAGAATGTAGTTCTTAGATGGAGACGTCATTACTaGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGC +
Preference number: 2 (lower is better)
Translates to: TDHRENVVLRWRRHY*HGKIREAICWGHLC
Trigger: GCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCATCTAAGAACTACATTCTCTCTGTGATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTCTGTTAGCAAGTACCTaGAGCCTTAGCCTTGGCAAA +
Preference number: 2 (lower is better)
Translates to: QPKACSVFKSIPAHSTLALLAST*SLSLGK
Trigger: TTTGCCAAGGCTAAGGCTTCAGGTACTTGCTAACAG...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp GTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGGAGTTGCAGGTCAGGTaGGTTGGTTCTGGAAGTACC +
Preference number: 2 (lower is better)
Translates to: VIWRLVIICLHLGSINSLELQVR*VGSGST
Trigger: GGTACTTCCAGAACCAACTCACCTGACCTGCAACTC...CAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR TCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTTTAGTCAGGATACCGTaGCAGAATTTAGGAATGTCA +
Preference number: 2 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTLVRIP*QNLGMS
Trigger: TGACATTCCTAAATTCTGTCACGGTATCCTGACTAA...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTCACACTGCTCTCTTGTaGAGCCACTGTGATCTCATG +
Preference number: 2 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLHTALL*SHCDLM
Trigger: CATGAGATCACAGTGGCTGCACAAGAGAGCAGTGTG...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCCAGTTCAGACTTTaGTGGCCTTGGCACTTAGAA +
Preference number: 2 (lower is better)
Translates to: STLEEAKHNLEALSELSPGQFRL*WPWHLE
Trigger: TTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCC...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTGGCCAGTTCAGACTTTaGTGGCCTTGGCACTTAGAA +
Preference number: 2 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFGQFRL*WPWHLE
Trigger: TTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCC...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCCTGTGGCGCACACTATaGATAAGTCACAGGGACACT +
Preference number: 2 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFLWRTL*ISHRDT
Trigger: AGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAG...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACGTTCAAGTCAATACCTaGTCACTCAACATTAGCTCA +
Preference number: 2 (lower is better)
Translates to: CWWATHQESRHRPESIIHVQVNT*SLNISS
Trigger: TGAGCTAATGTTGAGTGAGCAGGTATTGACTTGAAC...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGACAAAACCACTTAGGTaGTGCCCAAATGGTGAGAAA +
Preference number: 2 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLTKPLR*CPNGEK
Trigger: TTTCTCACCATTTGGGCAGCACCTAAGTGGTTTTGT...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TCCTTTTTACACAATTCTGTTTTGATCTTGAGCAGGTTGACCTTGAGGCACTCCTTCAGGGACACCCTGTaGTCCTTGGCTTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: SFLHNSVLILSRLTLRHSFRDTL*SLASCR
Trigger: TCTGCAGGAAGCCAAGGAGCACAGGGTGTCCCTGAA...GGAGTGCCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATTGTGTAAAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR GCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTGTCAACAAAGATGTCTaGTTTGCTTTCCTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: LHGKIREAICWGHLCCVTVNKDV*FAFLQH
Trigger: ATGCTGAAGGAAAGCAAAGCAGACATCTTTGTTGAC...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCAGGAATGAGGCGGGATaGCCAAGAATATTGCTTCTA +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGRNEAG*PRILLL
Trigger: TAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCT...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCTCAAGAGCCAGTCATTaGAAAATGCTCCAAGTAAGA +
Preference number: 2 (lower is better)
Translates to: SPSFEGCTNTELQLGVVASRASH*KMLQVR
Trigger: TCTTACTTGGAGCATTTTCCAATGACTGGCTCTTGA...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCCTCAGTGCAGATGGATaGACTGTTCAACTTCACAAA +
Preference number: 2 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSLSADG*TVQLHK
Trigger: TTTGTGAAGTTGAACAGTCCATCCATCTGCACTGAG...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTGCCTCTCAGTGCAGATaGATGGACTGTTCAACTTCA +
Preference number: 2 (lower is better)
Translates to: QPKACSVFKSIPAHSTLAASQCR*MDCSTS
Trigger: TGAAGTTGAACAGTCCATCCATCTGCACTGAGAGGC...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CCA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTTCGTTCATGTCCTTCTaGTGTTTGTTCTGTATCAGA +
Preference number: 2 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSSFMSF*CLFCIR
Trigger: TCTGATACAGAACAAACACCAGAAGGACATGAACGA...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CAA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTaGCTAATGACTTATCTATTATCTGAAGTCTGTGGAGGAAGGACC +
Preference number: 2 (lower is better)
Translates to: PDGFGELFTLKIRSG*LMTYLLSEVCGGRT
Trigger: GGTCCTTCCTCCACAGACTTCAGATAATAGATAAGTCATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCTTCCAGAAGCCACACTaGCATAAGAACAGAATCTTC +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGFQKPH*HKNRIF
Trigger: GAAGATTCTGTTCTTATGTCAGTGTGGCTTCTGGAA...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAGCTGCTGCTGCACGGTaGGGAGGAGGAGGACACCAT +
Preference number: 2 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTAAAAR*GGGGHH
Trigger: ATGGTGTCCTCCTCCTCCTCACCGTGCAGCAGCAGC...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACAGATGGCCAAGAATATTaGTTCTATAAAGCCCATATT +
Preference number: 2 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTDGQEY*FYKAHI
Trigger: AATATGGGCTTTATAGAAGCAATATTCTTGGCCATC...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGGGCCCTGTTTTGTTTTaGCAAATGAGGGACTTAATG +
Preference number: 2 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMGPVLF*QMRDLM
Trigger: CATTAAGTCCCTCATTTGGCAAAACAAAACAGGGCC...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGTTGTTCTTAATAGTTTaGCCAGACAGCTCACCTTCA +
Preference number: 2 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLLFLIV*PDSSPS
Trigger: TGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAA...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTCAAAGATGTCTGCTTTaGTTTCCTTCAGCATGTTTA +
Preference number: 2 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTQRCLL*FPSACL
Trigger: TAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTG...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTCAATGCCTACTAGAGTaGGTACACGCAGCAAATGGA +
Preference number: 2 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFQCLLE*VHAANG
Trigger: TCCATTTGCTGCGTGTACCCACTCTAGTAGGCATTG...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGCCGAGGGCAGGCCTTaGTCTACATGGACAGTTTTA +
Preference number: 2 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSAEGRP*STWTVL
Trigger: TAAAACTGTCCATGTAGACCAAGGCCTGCCCTCGGC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCCAGTTCAGACTTTGCTaGCCTTGGCACTTAGAAAAA +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGQFRLC*PWHLEK
Trigger: TTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTG...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCAAGTCACAGGGACACTaGCATGAACTGGTAAGTCCA +
Preference number: 2 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFKSQGH*HELVSP
Trigger: TGGACTTACCAGTTCATGCCAGTGTCCCTGTGACTT...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTAAGTCACAGGGACACTaGCATGAACTGGTAAGTCCA +
Preference number: 2 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLKSQGH*HELVSP
Trigger: TGGACTTACCAGTTCATGCCAGTGTCCCTGTGACTT...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTCAACAGCAACAGCAATaGAAGTCCAACATGCACCCA +
Preference number: 2 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFQQQQQ*KSNMHP
Trigger: TGGGTGCATGTTGGACTTCCATTGCTGTTGCTGTTG...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCAGTTTTAGGAGACTaGAGCATCCCAGACAGCTGT +
Preference number: 2 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSPVLGD*SIPDSC
Trigger: ACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGG...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATAGCAAGGCTTCTATTTaGATATCCTCTGATTCTAAC +
Preference number: 2 (lower is better)
Translates to: SRVTRLVIRPHIRPIRNNSKASI*ISSDSN
Trigger: GTTAGAATCAGAGGATATTCAAATAGAAGCCTTGCT...ATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567951.5
3UTR-3UTR GCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTAGACAGCCAAAGGCCTaGAGTGTGTTCAAGTCAATA +
Preference number: 2 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFRQPKA*SVFKSI
Trigger: TATTGACTTGAACACACTGCAGGCCTTTGGCTGTCT...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp GTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCGTCTATCTGGTTATCTaGCACATCGTGGCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: VTPMAHFSFMSFWCLFCIVYLVI*HIVAEV
Trigger: AACTTCTGCCACGATGTGGCAGATAACCAGATAGAC...GATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAACAAAGGAGCTTGTCTaGGAAGTTTGTCTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQTKELV*EVCLEC
Trigger: ACACTCCAGACAAACTTCCCAGACAAGCTCCTTTGT...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCTCAAGAGCCAGTCATTaGAAAATGCTCCAAGTAAGA +
Preference number: 2 (lower is better)
Translates to: TLEEAKHNLEALSELSPGSRASH*KMLQVR
Trigger: TCTTACTTGGAGCATTTTCCAATGACTGGCTCTTGA...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTAACAGAATCTTCTCTTaGGAAGGCCAAGGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFNRIFS*EGQGKS
Trigger: TGACTTCCCTTGGCCTTCCCAAGAGAAGATTCTGTT...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAACAACATTTAGCCAATaGCTACTAGAGTGGGTACAC +
Preference number: 2 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQTTFSQ*LLEWVH
Trigger: GTGTACCCACTCTAGTAGGCATTGGCTAAATGTTGT...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTTACTTCTATTACTGTTaGTGGGCTACACATCAGGAG +
Preference number: 2 (lower is better)
Translates to: STLEEAKHNLEALSELSPYFYYC*WATHQE
Trigger: CTCCTGATGTGTAGCCCACCAACAGTAATAGAAGTA...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR TCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACACTGAGAAGAGCGAGGTaGGTGGGGATGCTATACAAG +
Preference number: 2 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTLRRAR*VGMLYK
Trigger: CTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAG...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR GCA 90 bp CGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTTTTATTTTGCTCCTTGGCTTCCTaGAGAGTGTCATTGCGCACG +
Preference number: 2 (lower is better)
Translates to: RLVIICLHLGSINSLFLFCSLAS*RVSLRT
Trigger: CGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCA...AAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAGAGACACCTCAGTCATaGCACACTGGGTGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTETPQS*HTGWCA
Trigger: AGCACACCACCCAGTGTGCCATGACTGAGGTGTCTC...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR TCA 90 bp TCCTTTTTACACAATTCTGTTTTGATCTTGAGCAGGTTGACCTTGAGGCACTCCCTGATTCTAACTCAGTaGGGTTGCCAACTATATCTC +
Preference number: 2 (lower is better)
Translates to: SFLHNSVLILSRLTLRHSLILTQ*GCQLYL
Trigger: GAGATATAGTTGGCAACCTCACTGAGTTAGAATCAG...GGAGTGCCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATTGTGTAAAAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567951.5
3UTR-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGATGGCCAAGAATATTaGTTCTATAAAGCCCATATT +
Preference number: 2 (lower is better)
Translates to: STLEEAKHNLEALSELSPDGQEY*FYKAHI
Trigger: AATATGGGCTTTATAGAAGCAATATTCTTGGCCATC...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAAACATCCATCCTACCTaGAAACCACACCAGGCACGT +
Preference number: 2 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTNIHPT*KPHQAR
Trigger: ACGTGCCTGGTGTGGTTTGCAGGTAGGATGGATGTT...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCATCTGCAGACAACGAATaGGATTTTCTCTCAATTCAG +
Preference number: 2 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSSADNE*DFLSIQ
Trigger: CTGAATTGAGAGAAAATCCCATTCGTTGTCTGCAGA...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR GCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACAAGCCTGGAGGAGATaGGTTACTATATACATTTTT +
Preference number: 2 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSQAWRR*VTIYIF
Trigger: AAAAATGTATATAGTAACGCATCTCCTCCAGGCTTG...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CAA 90 bp GATGGCCAAGAATATTGCTTCTATAAAGCCCATATTCTGCAAAGGTaGATGAATCGCCAAAATACAACATTTAGCCAATGCCTACTAGAG +
Preference number: 2 (lower is better)
Translates to: DGQEYCFYKAHILQR*MNRQNTTFSQCLLE
Trigger: CTCTAGTAGGCATTGGCTAAATGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATATTCTTGGCCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CAA 90 bp TATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTTTTATTTaGCTTCAAGCACTGCAACATGGTTTTAGAATCTGCTTCCGGACA +
Preference number: 2 (lower is better)
Translates to: YHLFAFGIHQFTVFI*LQALQHGFRICFRT
Trigger: TGTCCGGAAGCAGATTCTAAAACCATGTTGCAGTGCTTGAAGCAAAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 72 bp CACAGCCTGGGGAACGGCTGCCCACCCACGCCTCGGTaGAGACCACGGCCCTGGCGAGGCCCCAAGGTGCTT +
Preference number: 3 (lower is better)
Translates to: HSLGNGCPPTPR*RPRPWRGPKVL
Trigger: AAGCACCTTGGGGCCTCGCCAGGGCCGTGGTCTTCACCGAGGCGTGGGTGGGCAGCCGTTCCCCAGGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CCA 72 bp TGCAGAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTaGCGGGAGGCAGTGTGTGCTGCTCGCACCCTGCGT +
Preference number: 3 (lower is better)
Translates to: CRDSRAAHSGWQ*REAVCAARTLR
Trigger: ACGCAGGGTGCGAGCAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp GATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTaGCCAGGAAGCGCTCCCGCTGCCGGCTTTCCGGAG +
Preference number: 3 (lower is better)
Translates to: DGLVWEHCAGGS*PGSAPAAGFPE
Trigger: CTCCGGAAAGCCGGCAGCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp CGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTaGTGCTCGCACCCTGCGTTTCCAGTTTTAGGAGAC +
Preference number: 3 (lower is better)
Translates to: RSLRLAVAGGSV*CSHPAFPVLGD
Trigger: GTCTCCTAAAACTGGAAACGCAGGGTGCGAGCAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp TGCTGCCCTGGAGGAGGAAGGTTCCTGGGATCCTGCTaGCCCGGGACTCAGGATCCAGCCTCTCAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: CCPGGGRFLGSC*PGTQDPASQCR
Trigger: TCTGCACTGAGAGGCTGGATCCTGAGTCCCGGGGCAGCAGGATCCCAGGAACCTTCCTCCTCCAGGGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 72 bp CCTCCGTCATCTCCAGCTCCTCCACACGGAGCTGCCTaGGGCACTTCAGGGACACCCTGTGCTCCTTGGCTT +
Preference number: 3 (lower is better)
Translates to: PPSSPAPPHGAA*GTSGTPCAPWL
Trigger: AAGCCAAGGAGCACAGGGTGTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGAGCTGGAGATGACGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CCA 72 bp CTGTTTTCCGGATGGACTGGTTTGGGAACACTGTGCTaGGGGAAGCTGCCCAGGAAGCGCTCCCGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: LFSGWTGLGTLC*GKLPRKRSRCR
Trigger: CCGGCAGCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGCTTGTCTGGGAAGTTaGTCTGGAGTGTGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLACLGS*SGVCRK
Trigger: CTTTCTGCACACTCCAGACAAACTTCCCAGACAAGC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp GATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTaGATGGCTCCCCTGCCGGTGCTTCTTGCTAACGGG +
Preference number: 3 (lower is better)
Translates to: DRFPGGDPKPME*MAPLPVLLANG
Trigger: CCCGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp CGGCACTTCAGGGACACCCTGTGCTCCTTGGCTTCCTaGAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: RHFRDTLCSLAS*RVSLRTVVLRQ
Trigger: CTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCACAGGGTGTCCCTGAAGTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 72 bp ACACGGAGCTGCCTGCGGCACTTCAGGGACACCCTGTaGTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACG +
Preference number: 3 (lower is better)
Translates to: TRSCLRHFRDTL*SLASCRVSLRT
Trigger: CGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCACAGGGTGTCCCTGAAGTGCCGCAGGCAGCTCCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 72 bp ACGGCCCTGGCGAGGCCCCAAGGTGCTTCTGAGAGATaGACGAGACACCTCAGTCATGGCACACTGGGTGGT +
Preference number: 3 (lower is better)
Translates to: TALARPQGASER*TRHLSHGTLGG
Trigger: ACCACCCAGTGTGCCATGACTGAGGTGTCTCGTTCATCTCTCAGAAGCACCTTGGGGCCTCGCCAGGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 72 bp GGGGTGATCCCAAGCCTATGGAGTGCATGGCTCCCCTaGCGGTGCTTCTTGCTAACGGGCTTGTCTAGGGAC +
Preference number: 3 (lower is better)
Translates to: GVIPSLWSAWLP*RCFLLTGLSRD
Trigger: GTCCCTAGACAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCTTGGGATCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp AGACTGTTTTCCGGATGGACTGGTTTGGGAACACTGTaGTGGGGGAAGCTGCCCAGGAAGCGCTCCCGCTGC +
Preference number: 3 (lower is better)
Translates to: RLFSGWTGLGTL*WGKLPRKRSRC
Trigger: GCAGCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAACAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp CTGGCAGTCCGGGCTCCAGGTACCTCTAGAGGGCTGTaGCGCACACTATGCATAAGTCACAGGGACACTGGC +
Preference number: 3 (lower is better)
Translates to: LAVRAPGTSRGL*RTLCISHRDTG
Trigger: GCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGTACCTGGAGCCCGGACTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp GGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATaGAGTGCATGGCTCCCCTGCCGGTGCTTCTTGCTA +
Preference number: 3 (lower is better)
Translates to: GKIAFPGVIPSL*SAWLPCRCFLL
Trigger: TAGCAAGAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp CCCCAAACTCAACCAAAGGAGTGCCACGCTGAACCATaGTGCCCGGACCCCTCCCTCTCACACCCAGACTTG +
Preference number: 3 (lower is better)
Translates to: PQTQPKECHAEP*CPDPSLSHPDL
Trigger: CAAGTCTGGGTGTGAGAGGGAGGGGTCCGGGCATCATGGTTCAGCGTGGCACTCCTTTGGTTGAGTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp TCTCATGCCCCAAACTCAACCAAAGGAGTGCCACGCTaGACCATGATGCCCGGACCCCTCCCTCTCACACCC +
Preference number: 3 (lower is better)
Translates to: SHAPNSTKGVPR*TMMPGPLPLTP
Trigger: GGGTGTGAGAGGGAGGGGTCCGGGCATCATGGTTCAGCGTGGCACTCCTTTGGTTGAGTTTGGGGCATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp GAAGACCACGGCCCTGGCGAGGCCCCAAGGTGCTTCTaGGAGATGAACGAGACACCTCAGTCATGGCACACT +
Preference number: 3 (lower is better)
Translates to: EDHGPGEAPRCF*EMNETPQSWHT
Trigger: AGTGTGCCATGACTGAGGTGTCTCGTTCATCTCTCAGAAGCACCTTGGGGCCTCGCCAGGGCCGTGGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 72 bp CACACCCATCTTCAAGGACCCCTCCCGCCACAGTCCTaGCTCCTGATGAAGCGCAGAGCTTCCAGAGTGACT +
Preference number: 3 (lower is better)
Translates to: HTHLQGPLPPQS*LLMKRRASRVT
Trigger: AGTCACTCTGGAAGCTCTGCGCTTCATCAGGAGGCAGGACTGTGGCGGGAGGGGTCCTTGAAGATGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CAA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGCTTCCCTTGGTGACTaGGCAGGGGGACAATCAGTT +
Preference number: 3 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSASLGD*AGGQSV
Trigger: AACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAGC...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCACATCCCAGACAGCTGTaGACAATCAGGAAGACCCTA +
Preference number: 3 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAHPRQL*TIRKTL
Trigger: TAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATG...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGTCCACAGAAGGGTCATaGTTTCTTTTCTTGACCATT +
Preference number: 3 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLSTEGS*FLFLTI
Trigger: AATGGTCAAGAAAAGAAACAATGACCCTTCTGTGGA...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATTCCTGCAGAGTGTCATaGCGCACGGTCGTGCTCAGG +
Preference number: 3 (lower is better)
Translates to: GKIREAICWGHLCCVTPHSCRVS*RTVVLR
Trigger: CCTGAGCACGACCGTGCGCAATGACACTCTGCAGGA...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 72 bp ATCCCAAGCCTATGGAGTGCATGGCTCCCCTGCCGGTaGTTCTTGCTAACGGGCTTGTCTAGGGACAACAGC +
Preference number: 3 (lower is better)
Translates to: IPSLWSAWLPCR*FLLTGLSRDNS
Trigger: GCTGTTGTCCCTAGACAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCTTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp AAGGCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTaGGGCCACTTTGGAAGGCCGAAGTGGGCACATCAT +
Preference number: 3 (lower is better)
Translates to: KAEVHFGRSGPL*GHFGRPKWAHH
Trigger: ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp TGGCTCACGCCTGTAATGCACTTTGGAAGGCCGAAGTaGACTTTGGCCGAAGTGGGCCACTTTGCGGCCACT +
Preference number: 3 (lower is better)
Translates to: WLTPVMHFGRPK*TLAEVGHFAAT
Trigger: AGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCCTTCCAAAGTGCATTACAGGCGTGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp AGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTaGGCACATCATGAGGTCAGGAGATGGAGACCATCC +
Preference number: 3 (lower is better)
Translates to: SGPLCGHFGRPK*AHHEVRRWRPS
Trigger: GGATGGTCTCCATCTCCTGACCTCATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATTGCAGGTCAGGTGAGTaGGTTCTGGAAGTACCGGAA +
Preference number: 3 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADCRSGE*VLEVPE
Trigger: TTCCGGTACTTCCAGAACCAACTCACCTGACCTGCA...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 72 bp TTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATaGGGTCAGGAGATGGAGACCATCCTGGACAACACG +
Preference number: 3 (lower is better)
Translates to: LRPLWKAEVGTS*GQEMETILDNT
Trigger: CGTGTTGTCCAGGATGGTCTCCATCTCCTGACCTCATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp AGAGGACCACGGGTCAGGATCCTGTCACCACCAGCCTaGGCAGACAGTCCCATCTTTGTGATCCAGGTGACA +
Preference number: 3 (lower is better)
Translates to: RGPRVRILSPPA*ADSPIFVIQVT
Trigger: TGTCACCTGGATCACAAAGATGGGACTGTCTGCTCAGGCTGGTGGTGACAGGATCCTGACCCGTGGTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp TGCCCCGGGACTCAGGATCCAGCCTCTCAGTGCAGATaGATGGACTGTTCAACTTCACAAACTTCCGGTCCC +
Preference number: 3 (lower is better)
Translates to: CPGTQDPASQCR*MDCSTSQTSGP
Trigger: GGGACCGGAAGTTTGTGAAGTTGAACAGTCCATCCATCTGCACTGAGAGGCTGGATCCTGAGTCCCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CAA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCCGCCGAGGGCAGGCCTaGGTCTACATGGACAGTTTT +
Preference number: 3 (lower is better)
Translates to: SPSFEGCTNTELQLGVVARRGQA*VYMDSF
Trigger: AAAACTGTCCATGTAGACCAAGGCCTGCCCTCGGCG...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTGCCCCAGGCCCTGTTTaGTTTTGCCAAATGAGGGAC +
Preference number: 3 (lower is better)
Translates to: GLTELPICGRSSIVNSSSAPGPV*FCQMRD
Trigger: GTCCCTCATTTGGCAAAACAAAACAGGGCCTGGGGC...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCCCTGAAGCCTTAGCCTaGGCAAAACCCCCTACCCTC +
Preference number: 3 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAPEALA*AKPPTL
Trigger: GAGGGTAGGGGGTTTTGCCAAGGCTAAGGCTTCAGG...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGAACAGAATCTTCTCTaGGGAAGGCCAAGGGAAGTC +
Preference number: 3 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSEQNLL*GRPREV
Trigger: GACTTCCCTTGGCCTTCCCAAGAGAAGATTCTGTTC...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp ACCGAGGGGACTAAGCAGCTTAGCAGCTTCCCTTGGTaGCTTGGCAGGGGGACAATCAGTTGGCTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: TEGTKQLSSFPW*LGRGTISWLLE
Trigger: TTCCAGAAGCCAACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAGCTGCTAAGCTGCTTAGTCCCCTCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp CTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTaGACATCCATCCTACCTGCAAACCACACCAGGCAC +
Preference number: 3 (lower is better)
Translates to: LQRGRIPHPVKQ*TSILPANHTRH
Trigger: GTGCCTGGTGTGGTTTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp ACAGCAACAGCAATGGAAGTCCAACATGCACCCAGGTaGAGGCCTCACAGAGCTCCCCATCTGTGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: TATAMEVQHAPR*RPHRAPHLWEK
Trigger: CTTCTCCCACAGATGGGGAGCTCTGTGAGGCCTTCACCTGGGTGCATGTTGGACTTCCATTGCTGTTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp CTTCACCAGGATGCATCCCCACCCTGGCCAGCTGAGTaGCTCACTGTTCCCAAGAAGAGTAAGGACAGCATG +
Preference number: 3 (lower is better)
Translates to: LHQDASPPWPAE*LTVPKKSKDSM
Trigger: CATGCTGTCCTTACTCTTCTTGGGAACAGTGAGTCACTCAGCTGGCCAGGGTGGGGATGCATCCTGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTaGCACTTAGAAAAACTTGCTCGGGGCCCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: LNECGQFRLCWP*HLEKLARGPAW
Trigger: CCAGGCAGGGCCCCGAGCAAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp ACCCTAGCATGTCTGACAGAAAGCCCTGCTGGGCTCTaGGGTCCAGATGTCAACTCTACATTGGAGGAGGCA +
Preference number: 3 (lower is better)
Translates to: TLACLTESPAGL*GPDVNSTLEEA
Trigger: TGCCTCCTCCAATGTAGAGTTGACATCTGGACCCCAGAGCCCAGCAGGGCTTTCTGTCAGACATGCTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp CATGGACACGAGTGGAGGCTGGATGGGACAACGCAGTaGACATCTGCTAATGCTCTAACACGGGGTTGGTGT +
Preference number: 3 (lower is better)
Translates to: HGHEWRLDGTTQ*TSANALTRGWC
Trigger: ACACCAACCCCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTCGTGTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
3UTR CCA 72 bp CCGGGACTCAGGATCCAGCCTCTCAGTGCAGATGGATaGACTGTTCAACTTCACAAACTTCCGGTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: PGLRIQPLSADG*TVQLHKLPVPS
Trigger: GGAAGGGACCGGAAGTTTGTGAAGTTGAACAGTCCATCCATCTGCACTGAGAGGCTGGATCCTGAGTCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CAA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCCGGCCAGTTCAGACTTaGCTGGCCTTGGCACTTAGA +
Preference number: 3 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFRPVQT*LALALR
Trigger: TCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCG...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATCTTGTTCTTAATAGTTaGCCCAGACAGCTCACCTTC +
Preference number: 3 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHLVLNS*PRQLTF
Trigger: GAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAG...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTCTCGTGTCACTCGCTaGGTGATCCGTCCACACATC +
Preference number: 3 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALSRVTR*VIRPHI
Trigger: GATGTGTGGACGGATCACCAAGCGAGTGACACGAGA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 72 bp CCTTTGCTGCGTAACTCCACATCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCGGGCTGTAACCTCACCC +
Preference number: 3 (lower is better)
Translates to: PLLRNSTSQSGH*GAFCTRAVTSP
Trigger: GGGTGAGGTTACAGCCCGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGATGTGGAGTTACGCAGCAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 72 bp TCTAGGGACAACAGCAACAGCAATGGAAGTCCAACATaGACCCAGGTGAAGGCCTCACAGAGCTCCCCATCT +
Preference number: 3 (lower is better)
Translates to: SRDNSNSNGSPT*TQVKASQSSPS
Trigger: AGATGGGGAGCTCTGTGAGGCCTTCACCTGGGTGCATGTTGGACTTCCATTGCTGTTGCTGTTGTCCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp GAGGGACTTAATGAGTGCGGCCAGTTCAGACTTTGCTaGCCTTGGCACTTAGAAAAACTTGCTCGGGGCCCT +
Preference number: 3 (lower is better)
Translates to: EGLNECGQFRLC*PWHLEKLARGP
Trigger: AGGGCCCCGAGCAAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAGTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp ATTTGCTGTACAGACTGTTTTCCGGATGGACTGGTTTaGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGC +
Preference number: 3 (lower is better)
Translates to: ICCTDCFPDGLV*EHCAGGSCPGS
Trigger: GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAACAGTCTGTACAGCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp CAGAAATACCCATGGCTGTGGGGCTGTGACCAGCAGTaGCTGATTAGGGTGGAAACTGGAAAGCGTCACTGT +
Preference number: 3 (lower is better)
Translates to: QKYPWLWGCDQQ*LIRVETGKRHC
Trigger: ACAGTGACGCTTTCCAGTTTCCACCCTAATCAGCCACTGCTGGTCACAGCCCCACAGCCATGGGTATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CCA 72 bp AATGAAGCGAGGAGACCACAGAAATACCCATGGCTGTaGGGCTGTGACCAGCAGTGGCTGATTAGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: NEARRPQKYPWL*GCDQQWLIRVE
Trigger: TTCCACCCTAATCAGCCACTGCTGGTCACAGCCCCACAGCCATGGGTATTTCTGTGGTCTCCTCGCTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CCA 72 bp TGCTTCAATGAAGCGAGGAGACCACAGAAATACCCATaGCTGTGGGGCTGTGACCAGCAGTGGCTGATTAGG +
Preference number: 3 (lower is better)
Translates to: CFNEARRPQKYP*LWGCDQQWLIR
Trigger: CCTAATCAGCCACTGCTGGTCACAGCCCCACAGCCATGGGTATTTCTGTGGTCTCCTCGCTTCATTGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CCA 72 bp ACACCCTCTCCACGTAGAGGCACAAAGGAGCTTGTCTaGGAAGTTTGTCTGGAGTGTGCAGAAAGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: TPSPRRGTKELV*EVCLECAERSG
Trigger: GCCTGACCTTTCTGCACACTCCAGACAAACTTCCCAGACAAGCTCCTTTGTGCCTCTACGTGGAGAGGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CAA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCGAGGCACAAAGGAGCTaGTCTGGGAAGTTTGTCTGG +
Preference number: 3 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTEAQRS*SGKFVW
Trigger: CCAGACAAACTTCCCAGACAAGCTCCTTTGTGCCTC...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAAGCTTCCCTTGGTGACTaGGCAGGGGGACAATCAGTT +
Preference number: 3 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQASLGD*AGGQSV
Trigger: AACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAGC...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATTGCTCTAACACGGGGTaGGTGTCACTTCTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: GKIREAICWGHLCCVTPHCSNTG*VSLLRR
Trigger: TCTTCTCAGAAGTGACACCAACCCCGTGTTAGAGCA...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGTGGGTGATCTGGCGCTaGGTTATCATCTGTTTGCAT +
Preference number: 3 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVWVIWR*VIICLH
Trigger: ATGCAAACAGATGATAACCAAGCGCCAGATCACCCA...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp TCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCCACCTCTAACTCAGTGAGGTaGCCAACTATATCTCTACAC +
Preference number: 3 (lower is better)
Translates to: SCRVSLRTVVLRQITTSTSNSVR*PTISLH
Trigger: GTGTAGAGATATAGTTGGCAACCTCACTGAGTTAGA...GGTGGACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567951.5
3UTR TCA 72 bp TCTCTACACTCCACCACCAAGTCATCCAGATGGTCCTaGAGGCACTCCAGCTCCTGTCCAGTCTCTGTTTTC +
Preference number: 3 (lower is better)
Translates to: SLHSTTKSSRWS*RHSSSCPVSVF
Trigger: GAAAACAGAGACTGGACAGGAGCTGGAGTGCCTTCAGGACCATCTGGATGACTTGGTGGTGGAGTGTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567951.5
3UTR GCA 72 bp GAACGAGACACCTCAGTCATGGCACACTGGGTGGTGTaGTTCCCCTCCAAGTCCTGTCTTTGTTTTACACAG +
Preference number: 3 (lower is better)
Translates to: ERDTSVMAHWVV*FPSKSCLCFTQ
Trigger: CTGTGTAAAACAAAGACAGGACTTGGAGGGGAAGCACACCACCCAGTGTGCCATGACTGAGGTGTCTCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CCA 72 bp GCTGTGGCGCACACTATGCATAAGTCACAGGGACACTaGCATGAACTGGTAAGTCCAGATGACAGTGACCCA +
Preference number: 3 (lower is better)
Translates to: AVAHTMHKSQGH*HELVSPDDSDP
Trigger: TGGGTCACTGTCATCTGGACTTACCAGTTCATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCGCTTGTCTGGGAAGTTaGTCTGGAGTGTGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFACLGS*SGVCRK
Trigger: CTTTCTGCACACTCCAGACAAACTTCCCAGACAAGC...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCGCCGAGGGCAGGCCTaGGTCTACATGGACAGTTTT +
Preference number: 3 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTRRGQA*VYMDSF
Trigger: AAAACTGTCCATGTAGACCAAGGCCTGCCCTCGGCG...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCAGAATTCTCCTAGCTTaGAAGGATGCACTAACACAG +
Preference number: 3 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSRILLA*KDALTQ
Trigger: CTGTGTTAGTGCATCCTTCAAAGCTAGGAGAATTCT...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGAGGCAGGAGAACTGCTaGAACCTAGGAGGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLRQENC*NLGGRS
Trigger: ACTTCTGCCTCCTAGGTTCAAGCAGTTCTCCTGCCT...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCTGCTCTAACACGGGGTaGGTGTCACTTCTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFCSNTG*VSLLRR
Trigger: TCTTCTCAGAAGTGACACCAACCCCGTGTTAGAGCA...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CAA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAATGCAGGTCAGGTGAGTaGGTTCTGGAAGTACCGGAA +
Preference number: 3 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQCRSGE*VLEVPE
Trigger: TTCCGGTACTTCCAGAACCAACTCACCTGACCTGCA...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CAA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACAAAAGACATAACCCCATaGCCCAAATCAAGCCTGGAG +
Preference number: 3 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTKDITP*PKSSLE
Trigger: CTCCAGGCTTGATTTGGGCAATGGGGTTATGTCTTT...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CAA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTCCTCCCCAGCTGCCCTaGTCTAGGAAGGCTCATGCT +
Preference number: 3 (lower is better)
Translates to: STLEEAKHNLEALSELSPPPQLP*SRKAHA
Trigger: AGCATGAGCCTTCCTAGACAAGGGCAGCTGGGGAGG...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR-3UTR CAA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGCGGAACAGAAGTTTTaGATGTCACTCTTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLAEQKF*MSLLQA
Trigger: AGCCTGCAAGAGTGACATCAAAAACTTCTGTTCCGC...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTTGATCTTGAGCAGGTaGACCTTGAGGCACTCCTCC +
Preference number: 3 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWLILSR*TLRHSS
Trigger: GGAGGAGTGCCTCAAGGTCAACCTGCTCAAGATCAA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGAATTCTGTTTTGATCTaGAGCAGGTTGACCTTGAGG +
Preference number: 3 (lower is better)
Translates to: PHPLILQCFHETGHLTPANSVLI*SRLTLR
Trigger: CCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATT...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGATCTCAATCCGGTCATaGAGGCGCTTTTTGCACTCG +
Preference number: 3 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALISIRS*RRFLHS
Trigger: CGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGAT...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCATCCCAGACAGCTGTaGACAATCAGGAAGACCCTA +
Preference number: 3 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLHPRQL*TIRKTL
Trigger: TAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCCAGACTTTGCTGGCCTaGGCACTTAGAAAAACTTGC +
Preference number: 3 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAQTLLA*ALRKTC
Trigger: GCAAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTG...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTCCTGCAGAGTGTCATaGCGCACGGTCGTGCTCAGG +
Preference number: 3 (lower is better)
Translates to: VIWRLVIICLHLGSINSLSCRVS*RTVVLR
Trigger: CCTGAGCACGACCGTGCGCAATGACACTCTGCAGGA...CAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCTGGAGACGTCATTACTaGCATGGCAAGATCAGAGAA +
Preference number: 3 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHIWRRHY*HGKIRE
Trigger: TTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCA...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 72 bp ATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTaGACTTTCCCCTGGCCCAGGGAGATTTCTCCACTG +
Preference number: 3 (lower is better)
Translates to: IGGGKTQSRGTV*TFPWPREISPL
Trigger: CAGTGGAGAAATCTCCCTGGGCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp CTGCCCTTGTCTAGGAAGGCTCATGCTTTGCTTCAATaGAGCGAGGAGACCACAGAAATACCCATGGCTGTG +
Preference number: 3 (lower is better)
Translates to: LPLSRKAHALLQ*SEETTEIPMAV
Trigger: CACAGCCATGGGTATTTCTGTGGTCTCCTCGCTTCATTGAAGCAAAGCATGAGCCTTCCTAGACAAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR GCA 72 bp AATGAGGGACTTAATGAGTGCGGCCAGTTCAGACTTTaGTGGCCTTGGCACTTAGAAAAACTTGCTCGGGGC +
Preference number: 3 (lower is better)
Translates to: NEGLNECGQFRL*WPWHLEKLARG
Trigger: GCCCCGAGCAAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAGTCCCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp CCTCAAGGCCTGAGAGAGACCCACAGCACCAGATGCTaGATTTTACAAAACCACTTAGGTGCTGCCCAAATG +
Preference number: 3 (lower is better)
Translates to: PQGLRETHSTRC*ILQNHLGAAQM
Trigger: CATTTGGGCAGCACCTAAGTGGTTTTGTAAAATGCAGCATCTGGTGCTGTGGGTCTCTCTCAGGCCTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp GGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTaGATAGGTAGTTCCTTTGGTGGTCAAGGTGGCTCT +
Preference number: 3 (lower is better)
Translates to: GMLYKRAVQTGH*IGSSFGGQGGS
Trigger: AGAGCCACCTTGACCACCAAAGGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAATTCTGTTTTGATCTaGAGCAGGTTGACCTTGAGG +
Preference number: 3 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHINSVLI*SRLTLR
Trigger: CCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATT...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 72 bp GTCATTGTTTCTTTTCTTGACCATTTCTCAGCCAGTTaGCTGACCTATAAGGCCAGGAACCAGGGGTGCCCC +
Preference number: 3 (lower is better)
Translates to: VIVSFLDHFSAS*LTYKARNQGCP
Trigger: GGGGCACCCCTGGTTCCTGGCCTTATAGGTCAGTCAACTGGCTGAGAAATGGTCAAGAAAAGAAACAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp TCTGCTAATGCTCTAACACGGGGTTGGTGTCACTTCTaGGAAGAGCGAGGTGAGTGGGGATGCTATACAAGA +
Preference number: 3 (lower is better)
Translates to: SANALTRGWCHF*EERGEWGCYTR
Trigger: TCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGAAGTGACACCAACCCCGTGTTAGAGCATTAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
3UTR GCA 72 bp AACTATAAGGGTGTTTACGCATACTGGGAAGGAGACTaGAGAGAGGAAGGATACCCCACCCGGTCAAACAGT +
Preference number: 3 (lower is better)
Translates to: NYKGVYAYWEGD*REEGYPTRSNS
Trigger: ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTTATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTTGTTCTTAATAGTTaGCCCAGACAGCTCACCTTC +
Preference number: 3 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLLVLNS*PRQLTF
Trigger: GAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGTTTTTGATGTCACTCTaGCAGGCTTCGTATAGATCT +
Preference number: 3 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLFLMSL*QASYRS
Trigger: AGATCTATACGAAGCCTGCAAGAGTGACATCAAAAA...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTGTGCTTAGCTGCTTCTaGTTTTCTTTCAGACATTCG +
Preference number: 3 (lower is better)
Translates to: LHGKIREAICWGHLCCVTVLSCF*FSFRHS
Trigger: CGAATGTCTGAAAGAAAACAAGAAGCAGCTAAGCAC...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCTGGAGACGTCATTACTaGCATGGCAAGATCAGAGAA +
Preference number: 3 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSWRRHY*HGKIRE
Trigger: TTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCA...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 72 bp CTCACACCCAGACTTGTCATCTCCACACTGGAGGAATaGGGCGGGATGGCCAAGAATATTGCTTCTATAAAG +
Preference number: 3 (lower is better)
Translates to: LTPRLVISTLEE*GGMAKNIASIK
Trigger: CTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAGATGACAAGTCTGGGTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp GGATGGGAGGATAGGAGACACTTCCAGAAGCCACACTaGCATAAGAACAGAATCTTCTCTTGGGAAGGCCAA +
Preference number: 3 (lower is better)
Translates to: GWEDRRHFQKPH*HKNRIFSWEGQ
Trigger: TTGGCCTTCCCAAGAGAAGATTCTGTTCTTATGTCAGTGTGGCTTCTGGAAGTGTCTCCTATCCTCCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp ACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTaGTCACTCAACATTAGCTCACTGGTCACCCTAGAA +
Preference number: 3 (lower is better)
Translates to: TAKGLQCVQVNT*SLNISSLVTLE
Trigger: TTCTAGGGTGACCAGTGAGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp AGTTTGTCTGGAGTGTGCAGAAAGGTCAGGCTGGACTaGCTGTCACATCCTGAGACCACACTAAACCTTTAT +
Preference number: 3 (lower is better)
Translates to: SLSGVCRKVRLD*LSHPETTLNLY
Trigger: ATAAAGGTTTAGTGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CCA 72 bp GTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTaGTGTTTGTTCTGTATCAGACACTCCATCAGGTCC +
Preference number: 3 (lower is better)
Translates to: VTPMAHFSFMSF*CLFCIRHSIRS
Trigger: GGACCTGATGGAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCCACAGAAGGGTCATaGTTTCTTTTCTTGACCATT +
Preference number: 3 (lower is better)
Translates to: CWWATHQESRHRPESIIHSTEGS*FLFLTI
Trigger: AATGGTCAAGAAAAGAAACAATGACCCTTCTGTGGA...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCAGACACTCTGCTCTAACACGGGGTaGGTGTCACTTCTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: DGTLLVHVLLVFVLYQTLCSNTG*VSLLRR
Trigger: TCTTCTCAGAAGTGACACCAACCCCGTGTTAGAGCA...GAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTTTTTTGATGTCACTCTaGCAGGCTTCGTATAGATCT +
Preference number: 3 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSFLMSL*QASYRS
Trigger: AGATCTATACGAAGCCTGCAAGAGTGACATCAAAAA...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGTTGGTTATCATCTGTTaGCATTTGGGATCCATCAAT +
Preference number: 3 (lower is better)
Translates to: EWRLDGTTQWTSANALTRLVIIC*HLGSIN
Trigger: ATTGATGGATCCCAAATGCAAACAGATGATAACCAA...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp GTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGCTCTTTATCATCTGCTaGCAGACCCTCATGAGGGTG +
Preference number: 3 (lower is better)
Translates to: VIWRLVIICLHLGSINSLLFIIC*QTLMRV
Trigger: CACCCTCATGAGGGTCTGCAAGCAGATGATAAAGAG...CAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR TCA 72 bp TCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTaGACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGA +
Preference number: 3 (lower is better)
Translates to: SQSSPSVGEAPL*TVRLVLNSLPR
Trigger: TCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp AAGAAGAGTAAGGACAGCATGAGACAGCCAAAGGCCTaGAGTGTGTTCAAGTCAATACCTGCTCACTCAACA +
Preference number: 3 (lower is better)
Translates to: KKSKDSMRQPKA*SVFKSIPAHST
Trigger: TGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCCTTACTCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp GGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATaGGCTCACAGGCTCTCATCAGCAAGGCTTCTATTT +
Preference number: 3 (lower is better)
Translates to: GYLPHRGRSSEL*AHRLSSARLLF
Trigger: AAATAGAAGCCTTGCTGATGAGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAACATATTCTGCAAAGGTaGATGAATCGCCAAAATACA +
Preference number: 3 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQHILQR*MNRQNT
Trigger: TGTATTTTGGCGATTCATCAACCTTTGCAGAATATG...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR TCA 72 bp GATTCGGTCTGGTTTGCTAATGACTTATCTATTATCTaGAGTCTGTGGAGGAAGGACCAAGAAGGGGTGCAG +
Preference number: 3 (lower is better)
Translates to: DSVWFANDLSII*SLWRKDQEGVQ
Trigger: CTGCACCCCTTCTTGGTCCTTCCTCCACAGACTTCAGATAATAGATAAGTCATTAGCAAACCAGACCGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR GCA 72 bp CACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTaGTTCTATAAAGCCCATATTCTGCAAAGGTTGATG +
Preference number: 3 (lower is better)
Translates to: HTGGMRRDGQEY*FYKAHILQRLM
Trigger: CATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp GTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGATGTCCTTCTGGTGTTaGTTCTGTATCAGACACTCC +
Preference number: 3 (lower is better)
Translates to: VIWRLVIICLHLGSINSLMSFWC*FCIRHS
Trigger: GGAGTGTCTGATACAGAACAAACACCAGAAGGACAT...CAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 72 bp AGGTTGATGAATCGCCAAAATACAACATTTAGCCAATaGCTACTAGAGTGGGTACACGCAGCAAATGGACAG +
Preference number: 3 (lower is better)
Translates to: RLMNRQNTTFSQ*LLEWVHAANGQ
Trigger: CTGTCCATTTGCTGCGTGTACCCACTCTAGTAGGCATTGGCTAAATGTTGTATTTTGGCGATTCATCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CCA 72 bp GCTCCCACTGATCACAGAGAGAATGTAGTTCTTAGATaGAGACGTCATTACTTGCATGGCAAGATCAGAGAA +
Preference number: 3 (lower is better)
Translates to: APTDHRENVVLR*RRHYLHGKIRE
Trigger: TTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCATCTAAGAACTACATTCTCTCTGTGATCAGTGGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACAGAGGCACAAAGGAGCTaGTCTGGGAAGTTTGTCTGG +
Preference number: 3 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTEAQRS*SGKFVW
Trigger: CCAGACAAACTTCCCAGACAAGCTCCTTTGTGCCTC...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR-3UTR CAA 90 bp TCCTTTTTACACAATTCTGTTTTGATCTTGAGCAGGTTGACCTTGAGGCACTCCAATTCTGAATCATCCTaGGCCTTAGTCAGGATACCG +
Preference number: 3 (lower is better)
Translates to: SFLHNSVLILSRLTLRHSNSESS*ALVRIP
Trigger: CGGTATCCTGACTAAGGCCAAGGATGATTCAGAATT...GGAGTGCCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATTGTGTAAAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 72 bp ATTTTGCTTCAAGCACTGCAACATGGTTTTAGAATCTaGTTCCGGACAGAACCTCTTTATCATCTGCTTGCA +
Preference number: 3 (lower is better)
Translates to: ILLQALQHGFRI*FRTEPLYHLLA
Trigger: TGCAAGCAGATGATAAAGAGGTTCTGTCCGGAAGCAGATTCTAAAACCATGTTGCAGTGCTTGAAGCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 72 bp CAGTATGAAGTACCGGGTCAACAAAGATGTCTGCTTTaGTTTCCTTCAGCATGTTTAGCACTTCCTTTTTAC +
Preference number: 3 (lower is better)
Translates to: QYEVPGQQRCLL*FPSACLALPFY
Trigger: GTAAAAAGGAAGTGCTAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTGTTGACCCGGTACTTCATACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp CGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTTTTATTTCTGAGCGTTGCCATATaGCACAGCGGAACAGAAGTT +
Preference number: 3 (lower is better)
Translates to: RLVIICLHLGSINSLFLFLSVAI*HSGTEV
Trigger: AACTTCTGTTCCGCTGTGCAATATGGCAACGCTCAG...AAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR-3UTR CAA 90 bp CGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTTTTATTTGTGCTTAGCTGCTTCTaGTTTTCTTTCAGACATTCG +
Preference number: 3 (lower is better)
Translates to: RLVIICLHLGSINSLFLFVLSCF*FSFRHS
Trigger: CGAATGTCTGAAAGAAAACAAGAAGCAGCTAAGCAC...AAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR GCA 72 bp TTTCAAGAACCAAATTCCTCATCAAACTTCCAAATCTaGAGACAACGAATGGGATTTTCTCTCAATTCAGAA +
Preference number: 3 (lower is better)
Translates to: FQEPNSSSNFQI*RQRMGFSLNSE
Trigger: TTCTGAATTGAGAGAAAATCCCATTCGTTGTCTGCAGATTTGGAAGTTTGATGAGGAATTTGGTTCTTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGTGCCACGCTGAACCATaGTGCCCGGACCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLCHAEP*CPDPSL
Trigger: GAGGGAGGGGTCCGGGCATCATGGTTCAGCGTGGCA...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGCGAAGGACACAAAGTTaGCCCCGGGACCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLRRTQS*PRDPGP
Trigger: AGGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCG...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGGAGGCAGTGTGTGCTaGTCGCACCCTGCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLGGSVC*SHPAFP
Trigger: TGGAAACGCAGGGTGCGAGCAGCACACACTGCCTCC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGGCTCTACCTGTCCTTaGGCTCTCGTGTCACTCGCT +
Preference number: 4 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLGSTCP*ALVSLA
Trigger: AGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGGCTCGGGGCCCTGCCTaGGGCTCTCAAGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPARGPA*GSQEPV
Trigger: GACTGGCTCTTGAGAGCCCCAGGCAGGGCCCCGAGC...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGCTTGCAGACCCTCATaGGGGTGTAGTCTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLACRPS*GCSLAL
Trigger: CAGAGCTAGACTACACCCTCATGAGGGTCTGCAAGC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGCCGCTCACTCCGGCTaGCAGTGGCGGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSAAHSG*QWREAV
Trigger: CACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGC...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAGGCGTGGTGGCGGGTaGCTGGAATCCCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPRRGGG*LESQLL
Trigger: GAGTAGCTGGGATTCCAGGCACCCGCCACCACGCCT...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAGAGGTCTCTGCCCAGTaGACTGCAGGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAEVSAQ*TAGGPG
Trigger: TCCAGGTCCCCCTGCAGTGCACTGGGCAGAGACCTC...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCTGGCTGTGGACGCCCTaGCCGGGGAGTTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSWLWTP*PGSFSA
Trigger: GGCCGAGAAACTCCCCGGCCAGGGCGTCCACAGCCA...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATTGGCTGTGGACGCCCTaGCCGGGGAGTTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADWLWTP*PGSFSA
Trigger: GGCCGAGAAACTCCCCGGCCAGGGCGTCCACAGCCA...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGTGGTGTAGGATCCTTTaGACTTCAGCTCGGCACTCC +
Preference number: 4 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLWCRIL*TSARHS
Trigger: GGAGTGCCGAGCTGAAGTCCAAAGGATCCTACACCA...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGCCCGCGGCCAGGGGTaGTGGCTGCGCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLARGQG*WLRSGV
Trigger: AACACCACTGCGCAGCCATCACCCCTGGCCGCGGGC...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATTCCTCCACACGGAGCTaGCTGCGGCACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHSSTRS*LRHFRD
Trigger: GTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGA...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATGCGACCAGCTGCTGCTaGTGCACGGTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADATSCC*CTVRRR
Trigger: CCTCCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGC...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGGTGTTTACGCATACTaGGAAGGAGACTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLGVYAY*EGDCRE
Trigger: CTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATAGGCACTCCTCCACCTaGCCTGTCTGCTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHRHSST*PVCSWA
Trigger: AGCCCAAGAGCAGACAGGTCAGGTGGAGGAGTGCCT...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACGCCCGCGGCCAGGGGTaGTGGCTGCGCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: CWWATHQESRHRPESIIHARGQG*WLRSGV
Trigger: AACACCACTGCGCAGCCATCACCCCTGGCCGCGGGC...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGCCCGCGGCCAGGGGTaGTGGCTGCGCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTARGQG*WLRSGV
Trigger: AACACCACTGCGCAGCCATCACCCCTGGCCGCGGGC...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCATCGCTTTCCCGGGGGTaGTCCCAAGCCTATGGAGTG +
Preference number: 4 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPSLSRG*SQAYGV
Trigger: CACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGA...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATGCTGCTGCTGCACGGTaGGGAGGAGGAGGACACCAT +
Preference number: 4 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADAAAAR*GGGGHH
Trigger: ATGGTGTCCTCCTCCTCCTCACCGTGCAGCAGCAGC...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCAATAGCAGCAGCAGATaGAGCGCCGCCGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: GFLQSVIAHGRAQADHHVNSSSR*SAADKR
Trigger: CCGCTTGTCGGCGGCGCTGCATCTGCTGCTGCTATT...GACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGGCACTTATACACTCTaGCCTCACCAGCTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLGTYTL*PHQLVY
Trigger: ATACACAAGCTGGTGAGGGCAGAGTGTATAAGTGCC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGAGGTCTCTGCCCAGTaGACTGCAGGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSEVSAQ*TAGGPG
Trigger: TCCAGGTCCCCCTGCAGTGCACTGGGCAGAGACCTC...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAGGAGGAGGACACCATaGACACGAGTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPRRRTP*TRVEAG
Trigger: TCCAGCCTCCACTCGTGTCCATGGTGTCCTCCTCCT...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATGTGTCACTCGCTTGGTaGTCCGTCCACACATCAGGC +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHVSLAW*SVHTSG
Trigger: GCCTGATGTGTGGACGGATCACCAAGCGAGTGACAC...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGTCCACACTGGAGGAATaGGGCGGGATGGCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPSTLEE*GGMAKN
Trigger: ATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGA...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGGGCTCCCTCACATCCTaGAGGCACTCGAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRGSLTS*RHSSTA
Trigger: GGCGGTGCTCGAGTGCCTGCAGGATGTGAGGGAGCC...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCCTGCAGAGTGTCATTaGGCACGGTCGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADPAECH*ARSCSG
Trigger: GCCTGAGCACGACCGTGCGCAATGACACTCTGCAGG...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGTCCTCCACACGGAGCTaGCTGCGGCACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVSSTRS*LRHFRD
Trigger: GTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGA...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTAGGAAGCGCTCCCGCTaGCGGCTTTCCGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSRKRSR*RLSGGL
Trigger: GAGACCTCCGGAAAGCCGGCAGCGGGAGCGCTTCCT...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTTGTGCTGGGGGAAGCTaGCCAGGAAGCGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSCAGGS*PGSAPA
Trigger: AGCGGGAGCGCTTCCTGGGCAGCTTCCCCCAGCACA...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGGCGACCAGCTGCTGCTaGTGCACGGTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMATSCC*CTVRRR
Trigger: CCTCCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGC...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACACCAGCGACCAGCTGCTaGTGCTGCACGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTPATSC*CCTVRR
Trigger: CCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGG...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCTTCCTGGGATCCTGCTaGCCCGGGACTCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSFLGSC*PGTQDP
Trigger: TGGATCCTGAGTCCCGGGGCAGCAGGATCCCAGGAA...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGACAAGTAGGAGAGCCTaGCTTCACGCGATCGCGGAA +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPTSRRA*LHAIAE
Trigger: TTCCGCGATCGCGTGAAGCCAGGCTCTCCTACTTGT...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCATCCAGCATCTCCCCCTaGCACTCACTGCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSASSISP*HSLLTC
Trigger: ACAAGTCAGCAGTGAGTGCCAGGGGGAGATGCTGGA...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCGACACGAGTGGAGGCTaGATGGGACAACGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GFLQSVIAHGRAQADHHVDTSGG*MGQRSG
Trigger: TCCACTGCGTTGTCCCATCCAGCCTCCACTCGTGTC...GACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCAGGAGGAGGACACCATaGACACGAGTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GFLQSVIAHGRAQADHHVRRRTP*TRVEAG
Trigger: TCCAGCCTCCACTCGTGTCCATGGTGTCCTCCTCCT...GACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CAA 72 bp GAAGGCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTaGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCA +
Preference number: 4 (lower is better)
Translates to: EGRSALWPKWAT*RPLWKAEVGTS
Trigger: TGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTCTGCTGAAGCTGCGATaGCTGAGGCAGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSLLKLR*LRQLGQ
Trigger: CTGCCCCAGCTGCCTCAGTCATCGCAGCTTCAGCAG...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTAGCTCGGCACTCCCGTaGGAGCCTCCTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSSSALP*EPPSLF
Trigger: GAACAGGGAAGGAGGCTCTCACGGGAGTGCCGAGCT...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGCTGATTCTAACTCAGTaGGGTTGCCAACTATATCTC +
Preference number: 4 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLLILTQ*GCQLYL
Trigger: GAGATATAGTTGGCAACCTCACTGAGTTAGAATCAG...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCCTGGTCTTCACAGTCTaGAGACAGGCGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSLVFTV*RQALVS
Trigger: GCTGACCAGCGCCTGTCTTCAGACTGTGAAGACCAG...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCGCCCGCGGCCAGGGGTaGTGGCTGCGCAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: TLEEAKHNLEALSELSPGARGQG*WLRSGV
Trigger: AACACCACTGCGCAGCCATCACCCCTGGCCGCGGGC...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATGTGTCACTCGCTTGGTaGTCCGTCCACACATCAGGC +
Preference number: 4 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADVSLAW*SVHTSG
Trigger: GCCTGATGTGTGGACGGATCACCAAGCGAGTGACAC...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCACACCCGGTCAAACAGTaGACATCCATCCTACCTGCA +
Preference number: 4 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAHPVKQ*TSILPA
Trigger: TGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTG...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAGGTTGCAGGGAGCTaGGATCGCGCCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSEVAGS*DRATAL
Trigger: CAGTGCAGTGGCGCGATCTCAGCTCCCTGCAACCTC...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAAGAGTAAGGACAGCATaGGACAGCCAAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSARVRTA*DSQRPA
Trigger: TGCAGGCCTTTGGCTGTCTCATGCTGTCCTTACTCT...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCATGTTCTAGGGCTGGCTaGCTTCCAAGGTTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPCSRAG*LPRFLV
Trigger: GACCAGGAACCTTGGAAGTCAGCCAGCCCTAGAACA...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCTCTAGAGGCACTGTCTaGACTTTCCCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSSRGTV*TFPWPR
Trigger: CCTGGGCCAGGGGAAAGTTCAGACAGTGCCTCTAGA...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGGAGTTGCAGGTCAGGTaGGTTGGTTCTGGAAGTACC +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPELQVR*VGSGST
Trigger: GGTACTTCCAGAACCAACTCACCTGACCTGCAACTC...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACCCGCCGCCTCCGGCCTaGCCTACGAAGGACACAAAG +
Preference number: 4 (lower is better)
Translates to: CWWATHQESRHRPESIIHPPPPA*PTKDTK
Trigger: CTTTGTGTCCTTCGTAGGGCAGGCCGGAGGCGGCGG...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTGGGTCACGTCCTCCCTaGAGGACTCTTCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSGSRPP*RTLPPP
Trigger: TGGCGGAGGAAGAGTCCTGCAGGGAGGACGTGACCC...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTGGCTCCCTCACATCCTaGAGGCACTCGAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSGSLTS*RHSSTA
Trigger: GGCGGTGCTCGAGTGCCTGCAGGATGTGAGGGAGCC...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCCATTGCGCACGGTCGTaGTCAGGCAGATCACCACGT +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSHCARS*SGRSPR
Trigger: ACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATG...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTTCCTCCACACGGAGCTaGCTGCGGCACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSSSTRS*LRHFRD
Trigger: GTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGA...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCACTTGCTCGGGGCCCTaGCTGGGGCTCTCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTTCSGP*LGLSRA
Trigger: GGCTCTTGAGAGCCCCAGGCAGGGCCCCGAGCAAGT...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGCCCAAGCCTATGGAGTaGATGGCTCCCCTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRPKPME*MAPLPV
Trigger: CACCGGCAGGGGAGCCATGCACTCCATAGGCTTGGG...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTGCTCTTGGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCCCAGCGACCAGCTGCTaGTGCTGCACGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SALGLLLLQHIDWRSRLSPATSC*CCTVRR
Trigger: CCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGG...GCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCCAAGAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTACCCCAGCGACCAGCTaGTGCTGCTGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSTPATS*CCCTVR
Trigger: CCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGGGGT...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp ACCAGCTGGAAGTGGGTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGACCCCAGCGACCAGCTaGTGCTGCTGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TSWKWVTPMAHFSFMSFWTPATS*CCCTVR
Trigger: CCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGGGGT...CCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTACCCACTTCCAGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCCGAAGGACACAAAGTTaGCCCCGGGACCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHIRRTQS*PRDPGP
Trigger: AGGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCG...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGTCCAGGGCGGACTCCTaGATAATGATTCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPSRADS*IMIRIW
Trigger: CCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGA...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGTTGTCATCTCCACACTaGAGGAATGAGGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPLSSPH*RNEAGW
Trigger: CCATCCCGCCTCATTCCTCCAGTGTGGAGATGACAA...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCGCCGCTCACTCCGGCTaGCAGTGGCGGGAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TLEEAKHNLEALSELSPGAAHSG*QWREAV
Trigger: CACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGC...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCACTGCTGAAGCTGCGATaGCTGAGGCAGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QTLHQVPRVYLVICHIVALLKLR*LRQLGQ
Trigger: CTGCCCCAGCTGCCTCAGTCATCGCAGCTTCAGCAG...TGCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGGTGAAAGTCATCCGATaGCAGCTCAGCCACCCGGAG +
Preference number: 4 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVVKVIR*QLSHPE
Trigger: CTCCGGGTGGCTGAGCTGTCATCGGATGACTTTCAC...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR TCA 90 bp CAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCAAGCTCGGCACTCCCGTaGGAGCCTCCTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QTLHQVPRVYLVICHIVASSALP*EPPSLF
Trigger: GAACAGGGAAGGAGGCTCTCACGGGAGTGCCGAGCT...TGCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGTCATCCAGATGGTCCTaGAGGCACTCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PHPLILQCFHETGHLTPASSRWS*RHSSSC
Trigger: ACAGGAGCTGGAGTGCCTTCAGGACCATCTGGATGA...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGCCTCCAGTGCTTCCATaGGACAGGACATTTGACGCC +
Preference number: 4 (lower is better)
Translates to: PHPLILQCFHETGHLTPAPPVLP*DRTFDA
Trigger: GGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGG...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGGTGTCACTCGCTTGGTaGTCCGTCCACACATCAGGC +
Preference number: 4 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVVSLAW*SVHTSG
Trigger: GCCTGATGTGTGGACGGATCACCAAGCGAGTGACAC...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCATGCCACGCTGAACCATaGTGCCCGGACCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSCHAEP*CPDPSL
Trigger: GAGGGAGGGGTCCGGGCATCATGGTTCAGCGTGGCA...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAAGGCAGAGAATTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPRQRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAATTCTCTGCCT...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGGTGCAGTTAGAGGGATaGGCAACCAAAGACCAATGG +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPVQLEG*ATKDQW
Trigger: CCATTGGTCTTTGGTTGCTCATCCCTCTAACTGCAC...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGCTGCTGCTGCACGGTaGGGAGGAGGAGGACACCAT +
Preference number: 4 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTAAAAR*GGGGHH
Trigger: ATGGTGTCCTCCTCCTCCTCACCGTGCAGCAGCAGC...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTCCACCCACGCCTCGGTaGAGACCACGGCCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLAPPTPR*RPRPWR
Trigger: TCGCCAGGGCCGTGGTCTTCACCGAGGCGTGGGTGG...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACAAATAGCAGCAGCAGATaGAGCGCCGCCGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTNSSSR*SAADKR
Trigger: CCGCTTGTCGGCGGCGCTGCATCTGCTGCTGCTATT...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACGGGTCACGTCCTCCCTaGAGGACTCTTCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: CWWATHQESRHRPESIIHGSRPP*RTLPPP
Trigger: TGGCGGAGGAAGAGTCCTGCAGGGAGGACGTGACCC...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTGGGTCACGTCCTCCCTaGAGGACTCTTCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: LHGKIREAICWGHLCCVTGSRPP*RTLPPP
Trigger: TGGCGGAGGAAGAGTCCTGCAGGGAGGACGTGACCC...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCTGCTCCTTGGCTTCCTaGAGAGTGTCATTGCGCACG +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSCSLAS*RVSLRT
Trigger: CGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCA...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATGCCAGGGGTGATGGCTaGGCAGTGGTGTTTAATGTC +
Preference number: 4 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADARGDG*AVVFNV
Trigger: GACATTAAACACCACTGCGCAGCCATCACCCCTGGC...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTGCGGGAGGCAGTGTGTaGTGCTCGCACCCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIAGGSV*CSHPAF
Trigger: AAACGCAGGGTGCGAGCAGCACACACTGCCTCCCGC...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAAGGCGTGGTGGCGGGTaGCTGGAATCCCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQRRGGG*LESQLL
Trigger: GAGTAGCTGGGATTCCAGGCACCCGCCACCACGCCT...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAACTTGCTCGGGGCCCTaGCTGGGGCTCTCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSTCSGP*LGLSRA
Trigger: GGCTCTTGAGAGCCCCAGGCAGGGCCCCGAGCAAGT...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAATGGAAGTCCAACATaGACCCAGGTGAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPNGSPT*TQVKAS
Trigger: TGAGGCCTTCACCTGGGTGCATGTTGGACTTCCATT...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAAGGAAGCGCTCCCGCTaGCGGCTTTCCGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSRKRSR*RLSGGL
Trigger: GAGACCTCCGGAAAGCCGGCAGCGGGAGCGCTTCCT...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATCCAGCGACCAGCTGCTaGTGCTGCACGGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SRVTRLVIRPHIRPIRNNPATSC*CCTVRR
Trigger: CCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGG...ATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAGATCCAGCCTCTCAGTaGAGATGGATGGACTGTTCA +
Preference number: 4 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSADPASQ*RWMDCS
Trigger: TGAACAGTCCATCCATCTGCACTGAGAGGCTGGATC...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACACTCCCGCCACAGTCCTaGCTCCTGATGAAGCGCAGA +
Preference number: 4 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTLPPQS*LLMKRR
Trigger: TCTGCGCTTCATCAGGAGGCAGGACTGTGGCGGGAG...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACTGGCTGTGGACGCCCTaGCCGGGGAGTTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHWLWTP*PGSFSA
Trigger: GGCCGAGAAACTCCCCGGCCAGGGCGTCCACAGCCA...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCTTGGCCCCGGGACCCTaGCCCTGGCTGTGGACGCCC +
Preference number: 4 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFLAPGP*PWLWTP
Trigger: GGGCGTCCACAGCCAGGGCCAGGGTCCCGGGGCCAA...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CATCCAGATGGTCCTGAAGGCACTCCAGCTCCTGTCCAGTCTCTGTTTTCTCACCGAAGGACACAAAGTTaGCCCCGGGACCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: HPDGPEGTPAPVQSLFSHRRTQS*PRDPGP
Trigger: AGGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCG...GTGAGAAAACAGAGACTGGACAGGAGCTGGAGTGCCTTCAGGACCATCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567951.5
CDS-3UTR CCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGCACTGCAGGGGGACCTaGAGGGCCCATTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRHCRGT*RAHFYH
Trigger: GTGGTAGAAATGGGCCCTCCAGGTCCCCCTGCAGTG...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGGGCCGGTCCAGACATaGCTGAGTCCTGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWGPVQT*LSPVLP
Trigger: GGGCAGCACAGGACTCAGCCATGTCTGGACCGGCCC...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CAA 72 bp TGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTaGGAAGGCCGAAGTGGGCACATCATGAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: CTLAEVGHFAAT*EGRSGHIMRSG
Trigger: TCCTGACCTCATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCGGCTGCGGCGGCTaGGGCTGCTGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPGGCGG*GCCCCC
Trigger: GCAACAGCAACAGCAGCCTCAGCCGCCGCAGCCGCC...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGTCCAATCCCGGGAGATaGAATACTGCAGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPSNPGR*NTAALR
Trigger: TCTTAGAGCTGCAGTATTTCATCTCCCGGGATTGGA...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAAAGCTCGGCACTCCCGTaGGAGCCTCCTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQSSALP*EPPSLF
Trigger: GAACAGGGAAGGAGGCTCTCACGGGAGTGCCGAGCT...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCGGGCAGGATCCAGCTTaGCATCCATGGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAGQDPA*HPWHAG
Trigger: ACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCC...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGCTGGTCTTCACAGTCTaGAGACAGGCGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRLVFTV*RQALVS
Trigger: GCTGACCAGCGCCTGTCTTCAGACTGTGAAGACCAG...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGACTGGAGATCTCGTCTaGGCAGTGCAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRTGDLV*AVQLEL
Trigger: CAGCTCCAGCTGCACTGCTCAGACGAGATCTCCAGT...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGACTGGAGATCTCGTCTaGGCAGTGCAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLTGDLV*AVQLEL
Trigger: CAGCTCCAGCTGCACTGCTCAGACGAGATCTCCAGT...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCTCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSSQSGH*GAFCTR
Trigger: CCGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGA...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTGTGTCACTCGCTTGGTaGTCCGTCCACACATCAGGC +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSVSLAW*SVHTSG
Trigger: GCCTGATGTGTGGACGGATCACCAAGCGAGTGACAC...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTAAAGGAGTGCCACGCTaGACCATGATGCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIKGVPR*TMMPGP
Trigger: GGGTCCGGGCATCATGGTTCAGCGTGGCACTCCTTT...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTCAACATGCACCCAGGTaGAGGCCTCACAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTQHAPR*RPHRAP
Trigger: GGGAGCTCTGTGAGGCCTTCACCTGGGTGCATGTTG...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAACCCACCCTGGCCAGCTaGGTGACTCACTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQPTLAS*VTHCSQ
Trigger: TTGGGAACAGTGAGTCACTCAGCTGGCCAGGGTGGG...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCAGCCTGGCAACGGAGTaGGACTCCATCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSSLATE*DSISET
Trigger: TGTTTCTGAGATGGAGTCTCACTCCGTTGCCAGGCT...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GCGGTAGTCCAGGGCGGACTCCTGGATAATGATTCGGATCTGGTCTTCACAGTCGGCTCTACCTGTCCTTaGGCTCTCGTGTCACTCGCT +
Preference number: 4 (lower is better)
Translates to: AVVQGGLLDNDSDLVFTVGSTCP*ALVSLA
Trigger: AGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCC...GACTGTGAAGACCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGACTACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCCGGCTCTACCTGTCCTTaGGCTCTCGTGTCACTCGCT +
Preference number: 4 (lower is better)
Translates to: LLQASYRSGSKRMSSVISGSTCP*ALVSLA
Trigger: AGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCC...GGAGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGTGACCAGCAGTGGCTaGTTAGGGTGGAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSVTSSG*LGWKLE
Trigger: TTCCAGTTTCCACCCTAATCAGCCACTGCTGGTCAC...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGTTGTTGCTCCAGGTGTaGTTAGGGCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLLLLQV*LGHTRV
Trigger: GACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAA...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCCTGCAGAGTGTCATTaGGCACGGTCGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSPAECH*ARSCSG
Trigger: GCCTGAGCACGACCGTGCGCAATGACACTCTGCAGG...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTCCTCCACACGGAGCTaGCTGCGGCACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWSSTRS*LRHFRD
Trigger: GTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCGTGTCGCTCCGGTCCTaGAGTGCACGTGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSVSLRS*SARGLC
Trigger: GCACAGTCCACGTGCACTGCAGGACCGGAGCGACAC...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCTGGCTCCCCTGCCGGTaGTTCTTGCTAACGGGCTTG +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFWLPCR*FLLTGL
Trigger: CAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCA...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCCAGCCACCCGGAGAATaGCTTTCTTGCAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSQPPGE*LSCRVQ
Trigger: CTGAACTCTGCAAGAAAGCCATTCTCCGGGTGGCTG...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAAAGTCACAGGGACACTaGCATGAACTGGTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAKSQGH*HELVSP
Trigger: TGGACTTACCAGTTCATGCCAGTGTCCCTGTGACTT...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAACCTCTAGAGGGCTGTaGCGCACACTATGCATAAGT +
Preference number: 4 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPTSRGL*RTLCIS
Trigger: ACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCAACAGCAACAGCAATaGAAGTCCAACATGCACCCA +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPQQQQQ*KSNMHP
Trigger: TGGGTGCATGTTGGACTTCCATTGCTGTTGCTGTTG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCAGCCTATGGAGTGCATaGCTCCCCTGCCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFSLWSA*LPCRCF
Trigger: GAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCT...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTAGCCTATGGAGTGCATaGCTCCCCTGCCGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LPANHTRHVRRHLHVHDISLWSA*LPCRCF
Trigger: GAAGCACCGGCAGGGGAGCCATGCACTCCATAGGCT...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGCACAGCACTCCAGCCTaGCAACGGAGTGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRHSTPA*QRSETP
Trigger: TGGAGTCTCACTCCGTTGCCAGGCTGGAGTGCTGTG...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGGCACTTTGGCCGAAGTaGGCCACTTTGCGGCCACTT +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRALWPK*ATLRPL
Trigger: AAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGC...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATCTCACCAGATGGCTTTaGGGAGCTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHLTRWL*GALHPK
Trigger: TTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAG...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCACTGCAGGGGGACCTaGAGGGCCCATTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIHCRGT*RAHFYH
Trigger: GTGGTAGAAATGGGCCCTCCAGGTCCCCCTGCAGTG...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGGAAGAGCGAGGTGAGTaGGGATGCTATACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PHPLILQCFHETGHLTPAEERGE*GCYTRG
Trigger: CCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGCGAGTGGAGGCTGGATaGGACAACGCAGTGGACATC +
Preference number: 4 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLRVEAG*DNAVDI
Trigger: GATGTCCACTGCGTTGTCCCATCCAGCCTCCACTCG...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATGACACGAGTGGAGGCTaGATGGGACAACGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GKIREAICWGHLCCVTPHDTSGG*MGQRSG
Trigger: TCCACTGCGTTGTCCCATCCAGCCTCCACTCGTGTC...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCAGTGCAGCTCACCATGGACACGAGTaGAGGCTGGATGGGACAACG +
Preference number: 4 (lower is better)
Translates to: GLLLLQHIDWRSRLSSAAHHGHE*RLDGTT
Trigger: CGTTGTCCCATCCAGCCTCCACTCGTGTCCATGGTG...AGCTGCACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACAGGAGGAGGACACCATaGACACGAGTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNRRRTP*TRVEAG
Trigger: TCCAGCCTCCACTCGTGTCCATGGTGTCCTCCTCCT...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGGCTGTGACCAGCAGTaGCTGATTAGGGTGGAAACT +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSGCDQQ*LIRVET
Trigger: AGTTTCCACCCTAATCAGCCACTGCTGGTCACAGCC...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CAA 72 bp GCATGGCTCCCCTGCCGGTGCTTCTTGCTAACGGGCTaGTCTAGGGACAACAGCAACAGCAATGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: AWLPCRCFLLTG*SRDNSNSNGSP
Trigger: TGGACTTCCATTGCTGTTGCTGTTGTCCCTAGACAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGGTGATGTTGCCTCGGTaGTCCACCAAGCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMVMLPR*STKQET
Trigger: GGTTTCCTGCTTGGTGGATCACCGAGGCAACATCAC...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTCTCCTGCAGCTTAAATACTTTTTGGTGGCAGCGGGTGCTTAGCTGCTTCTTGAGCTCGGCACTCCCGTaGGAGCCTCCTTCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VSCSLNTFWWQRVLSCFLSSALP*EPPSLF
Trigger: GAACAGGGAAGGAGGCTCTCACGGGAGTGCCGAGCT...CAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GCGGTAGTCCAGGGCGGACTCCTGGATAATGATTCGGATCTGGTCTTCACAGTCTCATCCAGATGGTCCTaGAGGCACTCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: AVVQGGLLDNDSDLVFTVSSRWS*RHSSSC
Trigger: ACAGGAGCTGGAGTGCCTTCAGGACCATCTGGATGA...GACTGTGAAGACCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGACTACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATGCTTGCAGACCCTCATaGGGGTGTAGTCTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GKIREAICWGHLCCVTPHACRPS*GCSLAL
Trigger: CAGAGCTAGACTACACCCTCATGAGGGTCTGCAAGC...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAAATCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCA +
Preference number: 4 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPNLCSG*SGAWLS
Trigger: TGATAACCAAGCGCCAGATCACCCAGAACACAGATT...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTACTGGAGATCTCGTCTaGGCAGTGCAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LHGKIREAICWGHLCCVTTGDLV*AVQLEL
Trigger: CAGCTCCAGCTGCACTGCTCAGACGAGATCTCCAGT...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATAGGCACTCCTCCACCTaGCCTGTCTGCTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SRVTRLVIRPHIRPIRNNRHSST*PVCSWA
Trigger: AGCCCAAGAGCAGACAGGTCAGGTGGAGGAGTGCCT...ATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTCCTCCAGTGCTTCCATaGGACAGGACATTTGACGCC +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSPPVLP*DRTFDA
Trigger: GGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGG...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTCCTCCAGTGCTTCCATaGGACAGGACATTTGACGCC +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSPPVLP*DRTFDA
Trigger: GGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGG...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGAAAGGAGTGCCACGCTaGACCATGATGCCCGGACCC +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLKGVPR*TMMPGP
Trigger: GGGTCCGGGCATCATGGTTCAGCGTGGCACTCCTTT...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGTCGCTTTCCCGGGGGTaGTCCCAAGCCTATGGAGTG +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLSLSRG*SQAYGV
Trigger: CACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGA...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCCCCTGGCCAGCTGAGTaGCTCACTGTTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFPWPAE*LTVPKK
Trigger: CTTCTTGGGAACAGTGAGTCACTCAGCTGGCCAGGG...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCCCCACCCTGGCCAGCTaGGTGACTCACTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSPTLAS*VTHCSQ
Trigger: TTGGGAACAGTGAGTCACTCAGCTGGCCAGGGTGGG...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCGTGTCCCTCAAGGCCTaGGAGAGACCCACAGCACCA +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSVSLKA*ERPTAP
Trigger: TGGTGCTGTGGGTCTCTCTCAGGCCTTGAGGGACAC...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGCTGTCACCACCAGCCTaGGCAGACAGTCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMLSPPA*ADSPIF
Trigger: AAAGATGGGACTGTCTGCTCAGGCTGGTGGTGACAG...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCTCTAGAGGCACTGTCTaGACTTTCCCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVASRGTV*TFPWPR
Trigger: CCTGGGCCAGGGGAAAGTTCAGACAGTGCCTCTAGA...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGGTCTATCTGGTTATCTaGCACATCGTGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPVYLVI*HIVAEV
Trigger: AACTTCTGCCACGATGTGGCAGATAACCAGATAGAC...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTCATTGCGCACGGTCGTaGTCAGGCAGATCACCACGT +
Preference number: 4 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTHCARS*SGRSPR
Trigger: ACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATG...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCCTGCAGAGTGTCATTaGGCACGGTCGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLPAECH*ARSCSG
Trigger: GCCTGAGCACGACCGTGCGCAATGACACTCTGCAGG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCCCGCTTATCCTCCAGTaGTTCCATGAGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSPLILQ*FHETGH
Trigger: ATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGG...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCTGCTGGGGCCACCTTTaGTGCGTAACTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHICWGHL*CVTPHL
Trigger: GAGATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCA...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACAAAGGTCAGGCTGGACTaGCTGTCACATCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTKVRLD*LSHPET
Trigger: GGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTT...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCGCGGGAGGCAGTGTGTaGTGCTCGCACCCTGCGTTT +
Preference number: 4 (lower is better)
Translates to: TLEEAKHNLEALSELSPGAGGSV*CSHPAF
Trigger: AAACGCAGGGTGCGAGCAGCACACACTGCCTCCCGC...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTGCCCCCAGGGGAACCTaGAGAGACTCTCGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLAPRGT*RDSRAA
Trigger: AGCGGCCCGAGAGTCTCTGCAGGTTCCCCTGGGGGC...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCGAAGTGGGCCACTTTaGGGCCACTTTGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLRSGPL*GHFGRP
Trigger: CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGACCCCAGCGACCAGCTaGTGCTGCTGCACGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQTPATS*CCCTVR
Trigger: CCTCACCGTGCAGCAGCAGCAGCTGGTCGCTGGGGT...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCTGGCTGTGGACGCCCTaGCCGGGGAGTTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFWLWTP*PGSFSA
Trigger: GGCCGAGAAACTCCCCGGCCAGGGCGTCCACAGCCA...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGCAGCCACCCGGAGAATaGCTTTCTTGCAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVQPPGE*LSCRVQ
Trigger: CTGAACTCTGCAAGAAAGCCATTCTCCGGGTGGCTG...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATTGGGCAATCAGCTTTTaGCGGGTTGTAAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHWAISF*RVVSAS
Trigger: AGAAGCACTTACAACCCGCCAAAAGCTGATTGCCCA...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGTTCCAACCGTGGGTGTaGCAAAGACGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVFQPWV*QRREAS
Trigger: AGACGCTTCTCGTCTTTGCCACACCCACGGTTGGAA...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCGCTCGGGGCCCTGCCTaGGGCTCTCAAGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFARGPA*GSQEPV
Trigger: GACTGGCTCTTGAGAGCCCCAGGCAGGGCCCCGAGC...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAGTGATCCCAAGCCTATaGAGTGCATGGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQVIPSL*SAWLPC
Trigger: GCAGGGGAGCCATGCACTCCATAGGCTTGGGATCAC...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AGTTTGTCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGGTGATCCCAAGCCTATaGAGTGCATGGCTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SLSGVCRKVRLDCLSHPEVIPSL*SAWLPC
Trigger: GCAGGGGAGCCATGCACTCCATAGGCTTGGGATCAC...CTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCAGACTTCCAAGGTTCCTaGTCCAGCTTCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPDFQGS*SSFLLL
Trigger: AAGAAGAAGGAAGCTGGACCAGGAACCTTGGAAGTC...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAACCTATACATGTGTCCTaGTGGAGCAGAGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQPIHVS*WSRGSG
Trigger: CCCGCTCCCTCTGCTCCACCAGGACACATGTATAGG...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGTTTTCCGGATGGACTaGTTTGGGAACACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSVFRMD*FGNTVL
Trigger: CAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAAC...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTCGAGTGGAGGCTGGATaGGACAACGCAGTGGACATC +
Preference number: 4 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTRVEAG*DNAVDI
Trigger: GATGTCCACTGCGTTGTCCCATCCAGCCTCCACTCG...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCACGAGTGGAGGCTGGATaGGACAACGCAGTGGACATC +
Preference number: 4 (lower is better)
Translates to: QTLHQVPRVYLVICHIVARVEAG*DNAVDI
Trigger: GATGTCCACTGCGTTGTCCCATCCAGCCTCCACTCG...TGCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCCACCATGGACACGAGTaGAGGCTGGATGGGACAACG +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAHHGHE*RLDGTT
Trigger: CGTTGTCCCATCCAGCCTCCACTCGTGTCCATGGTG...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTGCTCTTGGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCCACCATGGACACGAGTaGAGGCTGGATGGGACAACG +
Preference number: 4 (lower is better)
Translates to: SALGLLLLQHIDWRSRLSHHGHE*RLDGTT
Trigger: CGTTGTCCCATCCAGCCTCCACTCGTGTCCATGGTG...GCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCCAAGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCTCAGTCATGGCACACTaGGTGGTGTGCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTSVMAH*VVCFPS
Trigger: GGAGGGGAAGCACACCACCCAGTGTGCCATGACTGA...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGGAGACACCTCAGTCATaGCACACTGGGTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMETPQS*HTGWCA
Trigger: AGCACACCACCCAGTGTGCCATGACTGAGGTGTCTC...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp CTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCGAGGAGGAAGGTTCCTaGGATCCTGCTGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LHTGGMRRDGQEYCFYKAEEEGS*DPAAPG
Trigger: TCCCGGGGCAGCAGGATCCCAGGAACCTTCCTCCTC...GGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CAA 72 bp AGGGGACTAAGCAGCTTAGCAGCTTCCCTTGGTGACTaGGCAGGGGGACAATCAGTTGGCTTCTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: RGLSSLAASLGD*AGGQSVGFWNP
Trigger: TGGGTTCCAGAAGCCAACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAGCTGCTAAGCTGCTTAGTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CAA 72 bp ACGCCTGTAATGCACTTTGGAAGGCCGAAGTGCACTTaGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TPVMHFGRPKCT*AEVGHFAATLE
Trigger: TTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCCTTCCAAAGTGCATTACAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CAA 72 bp TGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTaGGTGATCCGTCCACACATCAGGCCAATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WLYLSLSSRVTR*VIRPHIRPIRN
Trigger: GTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTCTGCTGAAGCTGCGATaGCTGAGGCAGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLALLKLR*LRQLGQ
Trigger: CTGCCCCAGCTGCCTCAGTCATCGCAGCTTCAGCAG...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGTGAAAGTCATCCGATaGCAGCTCAGCCACCCGGAG +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKVKVIR*QLSHPE
Trigger: CTCCGGGTGGCTGAGCTGTCATCGGATGACTTTCAC...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGGTGAAAGTCATCCGATaGCAGCTCAGCCACCCGGAG +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLVKVIR*QLSHPE
Trigger: CTCCGGGTGGCTGAGCTGTCATCGGATGACTTTCAC...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCCTGGCACTCACTGCTaGCTTGTCGCCCTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLPGTHC*LVALCV
Trigger: TACACAGAGGGCGACAAGTCAGCAGTGAGTGCCAGG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGCCCGACAGCTTAGGATaGTCTCAGGGCTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMPDSLG*SQGSEK
Trigger: TTTCTCTGAGCCCTGAGATCATCCTAAGCTGTCGGG...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTCTCCTGCAGCTTAAATACTTTTTGGTGGCAGCGGGTGCTTAGCTGCTTCTTGGGGCAGGATCCAGCTTaGCATCCATGGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: VSCSLNTFWWQRVLSCFLGQDPA*HPWHAG
Trigger: ACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCC...CAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACGGGCAGGATCCAGCTTaGCATCCATGGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHGQDPA*HPWHAG
Trigger: ACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCC...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCCGGAACAGAAGTTTTTaGTGTCACTCTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GFLQSVIAHGRAQADHHVRNRSF*CHSCRL
Trigger: AAGCCTGCAAGAGTGACATCAAAAACTTCTGTTCCG...GACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTGCTTGCAGACCCTCATaGGGGTGTAGTCTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LHGKIREAICWGHLCCVTACRPS*GCSLAL
Trigger: CAGAGCTAGACTACACCCTCATGAGGGTCTGCAAGC...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CTGGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATGGGCTCACAGGCTCTAGGCACTCCTCCACCTaGCCTGTCTGCTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LVICHIVAEVLNYGLTGSRHSST*PVCSWA
Trigger: AGCCCAAGAGCAGACAGGTCAGGTGGAGGAGTGCCT...AGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATTCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: GKIREAICWGHLCCVTPHSQSGH*GAFCTR
Trigger: CCGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGA...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGAGCAGCTTCCCTTGGTaGCTTGGCAGGGGGACAATC +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWSSFPW*LGRGTI
Trigger: GATTGTCCCCCTGCCAAGTCACCAAGGGAAGCTGCT...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACCCTGGCCAGCTGAGTaGCTCACTGTTCCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSPWPAE*LTVPKK
Trigger: CTTCTTGGGAACAGTGAGTCACTCAGCTGGCCAGGG...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGCTGAGAAGAGCGAGGTaGGTGGGGATGCTATACAAG +
Preference number: 4 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLLRRAR*VGMLYK
Trigger: CTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAG...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACAATAGCAGCAGCAGATaGAGCGCCGCCGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHNSSSR*SAADKR
Trigger: CCGCTTGTCGGCGGCGCTGCATCTGCTGCTGCTATT...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGTTGTTGCTCCAGGTGTaGTTAGGGCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKLLLQV*LGHTRV
Trigger: GACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAA...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTTGTTGCTCCAGGTGTaGTTAGGGCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWLLLQV*LGHTRV
Trigger: GACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAGGCTCCCTCACATCCTaGAGGCACTCGAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQGSLTS*RHSSTA
Trigger: GGCGGTGCTCGAGTGCCTGCAGGATGTGAGGGAGCC...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATGTCTATCTGGTTATCTaGCACATCGTGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHVYLVI*HIVAEV
Trigger: AACTTCTGCCACGATGTGGCAGATAACCAGATAGAC...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTTGCTCCTTGGCTTCCTaGAGAGTGTCATTGCGCACG +
Preference number: 4 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTCSLAS*RVSLRT
Trigger: CGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCA...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCACATGGTTTTAGAATCTaGTTCCGGACAGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAHGFRI*FRTEPL
Trigger: AAGAGGTTCTGTCCGGAAGCAGATTCTAAAACCATG...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAGCCAGGGGTGATGGCTaGGCAGTGGTGTTTAATGTC +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQARGDG*AVVFNV
Trigger: GACATTAAACACCACTGCGCAGCCATCACCCCTGGC...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCGCCAGGGGTGATGGCTaGGCAGTGGTGTTTAATGTC +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFARGDG*AVVFNV
Trigger: GACATTAAACACCACTGCGCAGCCATCACCCCTGGC...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGTGGGGCCACCTTTGCTaGGTAACTCCACATCTCAAT +
Preference number: 4 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVWGHLC*VTPHLN
Trigger: ATTGAGATGTGGAGTTACGCAGCAAAGGTGGCCCCA...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TCTGCTCTTGGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCTGCTGGGGCCACCTTTaGTGCGTAACTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: SALGLLLLQHIDWRSRLSCWGHL*CVTPHL
Trigger: GAGATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCA...GCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCCAAGAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATGGAGACGTCATTACTTaGATGGCAAGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHGDVIT*MARSEK
Trigger: CTTCTCTGATCTTGCCATGCAAGTAATGACGTCTCC...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCAGTGCACGTGGACTGTaGAGAGCAGAGGCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVASARGL*RAEARV
Trigger: CACTCTTGCCTCTGCTCTGCACAGTCCACGTGCACT...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGGCACTTAGAAAAACTTaGTCGGGGCCCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLALRKT*SGPCLG
Trigger: CCCCAGGCAGGGCCCCGAGCAAGTTTTTCTAAGTGC...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCAGTGCATGGCTCCCCTaGCGGTGCTTCTTGCTAACG +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSSAWLP*RCFLLT
Trigger: CGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACT...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGCGAAGTGGGCCACTTTaGGGCCACTTTGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMRSGPL*GHFGRP
Trigger: CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCG...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTCTTTCCGGAGGTCTCTaGCCAGTGCACTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLALSGGL*PVHCRG
Trigger: CCCCCTGCAGTGCACTGGGCAGAGACCTCCGGAAAG...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTCGAGGTGAGTGGGGATaGTATACAAGAGGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSRGEWG*YTRGLY
Trigger: GTACAGCCCTCTTGTATAGCATCCCCACTCACCTCG...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp GCGGTAGTCCAGGGCGGACTCCTGGATAATGATTCGGATCTGGTCTTCACAGTCCGAGGTGAGTGGGGATaGTATACAAGAGGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: AVVQGGLLDNDSDLVFTVRGEWG*YTRGLY
Trigger: GTACAGCCCTCTTGTATAGCATCCCCACTCACCTCG...GACTGTGAAGACCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGACTACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCTCCAGCATCTCCCCCTaGCACTCACTGCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTSSISP*HSLLTC
Trigger: ACAAGTCAGCAGTGAGTGCCAGGGGGAGATGCTGGA...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCTCCAGCATCTCCCCCTaGCACTCACTGCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: SDTPSGPQSLSGYLPHRGSSISP*HSLLTC
Trigger: ACAAGTCAGCAGTGAGTGCCAGGGGGAGATGCTGGA...GCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGTTCCAACCGTGGGTGTaGCAAAGACGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMFQPWV*QRREAS
Trigger: AGACGCTTCTCGTCTTTGCCACACCCACGGTTGGAA...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACATTCCAACCGTGGGTGTaGCAAAGACGAGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTFQPWV*QRREAS
Trigger: AGACGCTTCTCGTCTTTGCCACACCCACGGTTGGAA...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAAGAGAAGCCATCTGCTaGGGCCACCTTTGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQREAIC*GHLCCV
Trigger: TACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCT...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTAGAGAAGCCATCTGCTaGGGCCACCTTTGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: LHGKIREAICWGHLCCVTREAIC*GHLCCV
Trigger: TACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCT...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGTTGTCATCTCCACACTaGAGGAATGAGGCGGGATGG +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRLSSPH*RNEAGW
Trigger: CCATCCCGCCTCATTCCTCCAGTGTGGAGATGACAA...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTGCCGAGGGCAGGCCTTaGTCTACATGGACAGTTTTA +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSAEGRP*STWTVL
Trigger: TAAAACTGTCCATGTAGACCAAGGCCTGCCCTCGGC...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTCACTCCGGCTGGCAGTaGCGGGAGGCAGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPHSGWQ*REAVCA
Trigger: AGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTG...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATAACAGAATCTTCTCTTaGGAAGGCCAAGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHNRIFS*EGQGKS
Trigger: TGACTTCCCTTGGCCTTCCCAAGAGAAGATTCTGTT...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAGCACTTTGGCCGAAGTaGGCCACTTTGCGGCCACTT +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSALWPK*ATLRPL
Trigger: AAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGC...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCATACATGTGTCCTGGTaGAGCAGAGGGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTIHVSW*SRGSGR
Trigger: TCTCCCGCTCCCTCTGCTCCACCAGGACACATGTAT...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCCCGGATGGACTGGTTTaGGAACACTGTGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSPDGLV*EHCAGG
Trigger: TCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGG...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp AGTTTGTCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGCCACAGAAATACCCATaGCTGTGGGGCTGTGACCAG +
Preference number: 4 (lower is better)
Translates to: SLSGVCRKVRLDCLSHPEPQKYP*LWGCDQ
Trigger: CTGGTCACAGCCCCACAGCCATGGGTATTTCTGTGG...CTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACAGACACTGATACTCAGTaGTGTTGCCTCGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTDTDTQ*CCLGDP
Trigger: TGGATCACCGAGGCAACATCACTGAGTATCAGTGTC...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp TGGCTGATTAGGGTGGAAACTGGAAAGCGTCACTGTCTCAGCAGAAGAAAGCAGCCTGGCACTCACTGCTaGCTTGTCGCCCTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: WLIRVETGKRHCLSRRKQPGTHC*LVALCV
Trigger: TACACAGAGGGCGACAAGTCAGCAGTGAGTGCCAGG...CTGCTTTCTTCTGCTGAGACAGTGACGCTTTCCAGTTTCCACCCTAATCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACCCTGGCACTCACTGCTaGCTTGTCGCCCTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHPGTHC*LVALCV
Trigger: TACACAGAGGGCGACAAGTCAGCAGTGAGTGCCAGG...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR TCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTCCCGACAGCTTAGGATaGTCTCAGGGCTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTPDSLG*SQGSEK
Trigger: TTTCTCTGAGCCCTGAGATCATCCTAAGCTGTCGGG...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000562090.5
CDS-3UTR TCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAGCTTGCAGACCCTCATaGGGGTGTAGTCTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSACRPS*GCSLAL
Trigger: CAGAGCTAGACTACACCCTCATGAGGGTCTGCAAGC...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTCTCCTGCAGCTTAAATACTTTTTGGTGGCAGCGGGTGCTTAGCTGCTTCTTGCTGGTCTTCACAGTCTaGAGACAGGCGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VSCSLNTFWWQRVLSCFLLVFTV*RQALVS
Trigger: GCTGACCAGCGCCTGTCTTCAGACTGTGAAGACCAG...CAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCTCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTSQSGH*GAFCTR
Trigger: CCGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGA...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCCACCCGGTCAAACAGTaGACATCCATCCTACCTGCA +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFHPVKQ*TSILPA
Trigger: TGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTG...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTGAGGTTGCAGGGAGCTaGGATCGCGCCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLEVAGS*DRATAL
Trigger: CAGTGCAGTGGCGCGATCTCAGCTCCCTGCAACCTC...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGCATTTCTCAGCCAGTTaGCTGACCTATAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMHFSAS*LTYKAR
Trigger: CCTGGCCTTATAGGTCAGTCAACTGGCTGAGAAATG...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAATGTTCTAGGGCTGGCTaGCTTCCAAGGTTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQCSRAG*LPRFLV
Trigger: GACCAGGAACCTTGGAAGTCAGCCAGCCCTAGAACA...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTCAAAATGCACATAATTaGGGCCAAGGTGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSQNAHN*GQGGWT
Trigger: GGTCCACCCACCTTGGCCTCAATTATGTGCATTTTG...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAAGGTTGGTGTCACTTCTaGGAAGAGCGAGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQGWCHF*EERGEW
Trigger: CCACTCACCTCGCTCTTCTCAGAAGTGACACCAACC...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTAATAGCAGCAGCAGATaGAGCGCCGCCGACAAGCGG +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLANSSSR*SAADKR
Trigger: CCGCTTGTCGGCGGCGCTGCATCTGCTGCTGCTATT...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGTTCCCTGTTCCTCAGTaGGGTAGGCGTGTCTGTATA +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRFPVPQ*GRRVCI
Trigger: TATACAGACACGCCTACCGCACTGAGGAACAGGGAA...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000562090.5
CDS-3UTR GCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGCGAAAATCCTTCATCTaGACCAGCTGGAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVRKSFI*TSWKWV
Trigger: TACCCACTTCCAGCTGGTGCAGATGAAGGATTTTCG...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGCATTGCGCACGGTCGTaGTCAGGCAGATCACCACGT +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMHCARS*SGRSPR
Trigger: ACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATG...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTTCAGGGACACCCTGTaGTCCTTGGCTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWFRDTL*SLASCR
Trigger: TCTGCAGGAAGCCAAGGAGCACAGGGTGTCCCTGAA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCCCGCTTATCCTCCAGTaGTTCCATGAGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHIPLILQ*FHETGH
Trigger: ATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGG...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTTGGGGCCACCTTTGCTaGGTAACTCCACATCTCAAT +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSWGHLC*VTPHLN
Trigger: ATTGAGATGTGGAGTTACGCAGCAAAGGTGGCCCCA...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTAGTTTGTCTGGAGTGTaGAGAAAGGTCAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSSLSGV*RKVRLD
Trigger: GTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGAGTTTGTCTGGAGTGTaGAGAAAGGTCAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMSLSGV*RKVRLD
Trigger: GTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATACAACATTTAGCCAATaGCTACTAGAGTGGGTACAC +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHTTFSQ*LLEWVH
Trigger: GTGTACCCACTCTAGTAGGCATTGGCTAAATGTTGT...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGTGTCGCTCCGGTCCTaGAGTGCACGTGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPVSLRS*SARGLC
Trigger: GCACAGTCCACGTGCACTGCAGGACCGGAGCGACAC...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CATCCAGATGGTCCTGAAGGCACTCCAGCTCCTGTCCAGTCTCTGTTTTCTCACCGAGGTGAGTGGGGATaGTATACAAGAGGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: HPDGPEGTPAPVQSLFSHRGEWG*YTRGLY
Trigger: GTACAGCCCTCTTGTATAGCATCCCCACTCACCTCG...GTGAGAAAACAGAGACTGGACAGGAGCTGGAGTGCCTTCAGGACCATCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567951.5
CDS-3UTR GCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCGCACACTGGGTGGTGTaGTTCCCCTCCAAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TLEEAKHNLEALSELSPGAHWVV*FPSKSC
Trigger: ACAGGACTTGGAGGGGAAGCACACCACCCAGTGTGC...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATGTCTCATTCCAACCGTaGGTGTGGCAAAGACGAGAA +
Preference number: 4 (lower is better)
Translates to: GKIREAICWGHLCCVTPHVSFQP*VWQRRE
Trigger: TTCTCGTCTTTGCCACACCCACGGTTGGAATGAGAC...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTTGGTGTAGGATCCTTTaGACTTCAGCTCGGCACTCC +
Preference number: 4 (lower is better)
Translates to: LHGKIREAICWGHLCCVTWCRIL*TSARHS
Trigger: GGAGTGCCGAGCTGAAGTCCAAAGGATCCTACACCA...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGTGCACCAGCTGGAAGTaGGTAACTCCGATGGCACAC +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKCTSWK*VTPMAH
Trigger: GTGTGCCATCGGAGTTACCCACTTCCAGCTGGTGCA...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTGCACCAGCTGGAAGTaGGTAACTCCGATGGCACAC +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWCTSWK*VTPMAH
Trigger: GTGTGCCATCGGAGTTACCCACTTCCAGCTGGTGCA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATTGCACCAGCTGGAAGTaGGTAACTCCGATGGCACAC +
Preference number: 4 (lower is better)
Translates to: SRVTRLVIRPHIRPIRNNCTSWK*VTPMAH
Trigger: GTGTGCCATCGGAGTTACCCACTTCCAGCTGGTGCA...ATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGTTCATCTGCACCAGCTaGAAGTGGGTAACTCCGATG +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRFICTS*KWVTPM
Trigger: CATCGGAGTTACCCACTTCCAGCTGGTGCAGATGAA...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCTCCAGGGCGGACTCCTaGATAATGATTCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SDTPSGPQSLSGYLPHRGSRADS*IMIRIW
Trigger: CCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGA...GCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCGTGATGGCTGCGCAGTaGTGTTTAATGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAVMAAQ*CLMSRA
Trigger: TGCCCTGGACATTAAACACCACTGCGCAGCCATCAC...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACCAGCTGGAAGTGGGTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGGTGATGGCTGCGCAGTaGTGTTTAATGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TSWKWVTPMAHFSFMSFWVMAAQ*CLMSRA
Trigger: TGCCCTGGACATTAAACACCACTGCGCAGCCATCAC...CCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTACCCACTTCCAGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCTGCTCTTGGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCGTGATGGCTGCGCAGTaGTGTTTAATGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SALGLLLLQHIDWRSRLSVMAAQ*CLMSRA
Trigger: TGCCCTGGACATTAAACACCACTGCGCAGCCATCAC...GCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCCAAGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCCAATCAGTTGGCTTCTaGAACCCACTGCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAQSVGF*NPLPPG
Trigger: TCCTGGAGGCAGTGGGTTCCAGAAGCCAACTGATTG...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCTTCCCTTGGTGACTTaGCAGGGGGACAATCAGTTG +
Preference number: 4 (lower is better)
Translates to: LPANHTRHVRRHLHVHDILPLVT*QGDNQL
Trigger: CAACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAG...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCCTTCCCTTGGTGACTTaGCAGGGGGACAATCAGTTG +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFLPLVT*QGDNQL
Trigger: CAACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAG...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCATTCTATTACTGTTGGTaGGCTACACATCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPFYYCW*ATHQES
Trigger: ACTCTCCTGATGTGTAGCCCACCAACAGTAATAGAA...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGCACAGGCCTGGAGGATaGGAGGATAGGAGACACTTC +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKHRPGG*EDRRHF
Trigger: GAAGTGTCTCCTATCCTCCCATCCTCCAGGCCTGTG...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCAGCCCTGCTGGGCTCTaGGGTCCAGATGTCAACTCT +
Preference number: 4 (lower is better)
Translates to: TLEEAKHNLEALSELSPGSPAGL*GPDVNS
Trigger: AGAGTTGACATCTGGACCCCAGAGCCCAGCAGGGCT...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGTTGGGAACACTGTGCTaGGGGAAGCTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMLGTLC*GKLPRK
Trigger: CTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAA...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGCCGGATGGACTGGTTTaGGAACACTGTGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMPDGLV*EHCAGG
Trigger: TCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGG...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCTTTGGTGGTCAAGGTaGCTCTACCTGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSLWWSR*LYLSLS
Trigger: GCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAATCATGGCACACTGGGTaGTGTGCTTCCCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQSWHTG*CASPPS
Trigger: ACTTGGAGGGGAAGCACACCACCCAGTGTGCCATGA...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGGACCCCACACAGCCTaGGGAACGGCTGCCCACCCA +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSGPHTA*GTAAHP
Trigger: TGGGTGGGCAGCCGTTCCCCAGGCTGTGTGGGGTCC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACGTGATGTTGCCTCGGTaGTCCACCAAGCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHVMLPR*STKQET
Trigger: GGTTTCCTGCTTGGTGGATCACCGAGGCAACATCAC...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGACACTGATACTCAGTaGTGTTGCCTCGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALDTDTQ*CCLGDP
Trigger: TGGATCACCGAGGCAACATCACTGAGTATCAGTGTC...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTGACACTGATACTCAGTaGTGTTGCCTCGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: LHGKIREAICWGHLCCVTDTDTQ*CCLGDP
Trigger: TGGATCACCGAGGCAACATCACTGAGTATCAGTGTC...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATTTTTGCAGTCATCCATaGAGCCACAGATTAAACGGT +
Preference number: 4 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADFCSHP*SHRLNG
Trigger: ACCGTTTAATCTGTGGCTTCATGGATGACTGCAAAA...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTAAATGCCGGTCTAAGTaGAAGTCATCCGATGACAGC +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSKCRSK*KSSDDS
Trigger: GCTGTCATCGGATGACTTTCACTTAGACCGGCATTT...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCAGTGCAGCTAAATGCCGGTCTAAGTaGAAGTCATCCGATGACAGC +
Preference number: 4 (lower is better)
Translates to: GLLLLQHIDWRSRLSSAAKCRSK*KSSDDS
Trigger: GCTGTCATCGGATGACTTTCACTTAGACCGGCATTT...AGCTGCACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR TCA 90 bp GCGGTAGTCCAGGGCGGACTCCTGGATAATGATTCGGATCTGGTCTTCACAGTCTCCAATCCCGGGAGATaGAATACTGCAGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: AVVQGGLLDNDSDLVFTVSNPGR*NTAALR
Trigger: TCTTAGAGCTGCAGTATTTCATCTCCCGGGATTGGA...GACTGTGAAGACCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGACTACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR TCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCGTGGCAGAAGTTCTaGATTATGGGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: CWWATHQESRHRPESIIHSWQKF*IMGSQA
Trigger: AGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGA...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAATCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCA +
Preference number: 4 (lower is better)
Translates to: LYLSLSSRVTRLVIRPHINLCSG*SGAWLS
Trigger: TGATAACCAAGCGCCAGATCACCCAGAACACAGATT...GATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCAGGGCACAAGCAGTATaGAGTACCGGGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFRAQAV*STGSTK
Trigger: CTTTGTTGACCCGGTACTTCATACTGCTTGTGCCCT...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCCCAGTTTTAGGAGACTaGAGCATCCCAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAPVLGD*SIPDSC
Trigger: ACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGG...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGCTGTTAGCAAGTACCTaGAGCCTTAGCCTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMLLAST*SLSLGK
Trigger: TTTGCCAAGGCTAAGGCTTCAGGTACTTGCTAACAG...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAAAGAGTAAGGACAGCATaGGACAGCCAAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQRVRTA*DSQRPA
Trigger: TGCAGGCCTTTGGCTGTCTCATGCTGTCCTTACTCT...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCGTGTCCCTCAAGGCCTaGGAGAGACCCACAGCACCA +
Preference number: 4 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFVSLKA*ERPTAP
Trigger: TGGTGCTGTGGGTCTCTCTCAGGCCTTGAGGGACAC...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCGGTGCTTCTGAGAGATaGACGAGACACCTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTGASER*TRHLSH
Trigger: ATGACTGAGGTGTCTCGTTCATCTCTCAGAAGCACC...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGAGTCTTCCATCAACATaGGTCGGTAATCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVSLPST*VGNPAS
Trigger: AGATGCTGGATTACCGACGCATGTTGATGGAAGACT...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR GCA 90 bp AGTTTGTCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGATCAATGCGGTAATCTaGACCAGGGTCAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLSGVCRKVRLDCLSHPEINAVI*TRVSLL
Trigger: CAGGAGACTGACCCTGGTGCAGATTACCGCATTGAT...CTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp GGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTCCACATTCAAAGCTCGATCAATaGGGTAATCTGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: GKIREAICWGHLCCVTPHSKLDQ*GNLHQG
Trigger: ACCCTGGTGCAGATTACCGCATTGATCGAGCTTTGA...ATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR GCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTTCCCTGTTCCTCAGTaGGGTAGGCGTGTCTGTATA +
Preference number: 4 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALFPVPQ*GRRVCI
Trigger: TATACAGACACGCCTACCGCACTGAGGAACAGGGAA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000562090.5
CDS-3UTR GCA 90 bp GTCTCCTGCAGCTTAAATACTTTTTGGTGGCAGCGGGTGCTTAGCTGCTTCTTGTTCAGGGACACCCTGTaGTCCTTGGCTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VSCSLNTFWWQRVLSCFLFRDTL*SLASCR
Trigger: TCTGCAGGAAGCCAAGGAGCACAGGGTGTCCCTGAA...CAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGTTTGGTGGCAGCGGGTaGTTAGCTGCTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMFGGSG*LAASCF
Trigger: AAAACAAGAAGCAGCTAAGCACCCGCTGCCACCAAA...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GCGGTAGTCCAGGGCGGACTCCTGGATAATGATTCGGATCTGGTCTTCACAGTCTTTGGTGGCAGCGGGTaGTTAGCTGCTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: AVVQGGLLDNDSDLVFTVFGGSG*LAASCF
Trigger: AAAACAAGAAGCAGCTAAGCACCCGCTGCCACCAAA...GACTGTGAAGACCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGACTACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCCATGGTTTTAGAATCTaGTTCCGGACAGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSHGFRI*FRTEPL
Trigger: AAGAGGTTCTGTCCGGAAGCAGATTCTAAAACCATG...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CCTCACCCGCTTATCCTCCAGTGCTTCCATGAGACAGGACATTTGACGCCCGCGCATGGTTTTAGAATCTaGTTCCGGACAGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: PHPLILQCFHETGHLTPAHGFRI*FRTEPL
Trigger: AAGAGGTTCTGTCCGGAAGCAGATTCTAAAACCATG...CGCGGGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCACAAAGATGTCTGCTTTaGTTTCCTTCAGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAQRCLL*FPSACL
Trigger: TAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTG...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTGCTTCTGGAACCCACTaGCTCCAGGAAGGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLAASGTH*LQEGQQ
Trigger: TTGCTGCCCTTCCTGGAGGCAGTGGGTTCCAGAAGC...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTGGAGGCAGTGTGTGCTaGTCGCACCCTGCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLGGSVC*SHPAFP
Trigger: TGGAAACGCAGGGTGCGAGCAGCACACACTGCCTCC...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCGGCCAGTTCAGACTTTaGTGGCCTTGGCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFGQFRL*WPWHLE
Trigger: TTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCC...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCCTGTGGCGCACACTATaGATAAGTCACAGGGACACT +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFLWRTL*ISHRDT
Trigger: AGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAG...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATTTGTTCTTAATAGTTTaGCCAGACAGCTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHLFLIV*PDSSPS
Trigger: TGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAA...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCACAAAACCACTTAGGTaGTGCCCAAATGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSTKPLR*CPNGEK
Trigger: TTTCTCACCATTTGGGCAGCACCTAAGTGGTTTTGT...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGTTTGGGAACACTGTaGTGGGGGAAGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPGLGTL*WGKLPR
Trigger: CCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACC...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCCTTTTTACACAATTCTGTTTTGATCTTGAGCAGGTTGACCTTGAGGCACTCCGCGACCAGCTGCTGCTaGTGCACGGTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SFLHNSVLILSRLTLRHSATSCC*CTVRRR
Trigger: CCTCCTCCTCACCGTGCAGCAGCAGCAGCTGGTCGC...GGAGTGCCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATTGTGTAAAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCCTGGGCAATCAGCTTTTaGCGGGTTGTAAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLQASYRSGSKRMSSVISWAISF*RVVSAS
Trigger: AGAAGCACTTACAACCCGCCAAAAGCTGATTGCCCA...GGAGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGTGGTGTAGGATCCTTTaGACTTCAGCTCGGCACTCC +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLWCRIL*TSARHS
Trigger: GGAGTGCCGAGCTGAAGTCCAAAGGATCCTACACCA...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACATCCATGGCACGCTaGTGTAGGATCCTTTGGACT +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQTSMAR*CRILWT
Trigger: AGTCCAAAGGATCCTACACCAGCGTGCCATGGATGT...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTGCTCTTGGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCTCCCCAGAGTCTATCTaGTTATCTGCCACATCGTGG +
Preference number: 4 (lower is better)
Translates to: SALGLLLLQHIDWRSRLSSPESI*LSATSW
Trigger: CCACGATGTGGCAGATAACCAGATAGACTCTGGGGA...GCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCCAAGAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCTCCCCAGAGTCTATCTaGTTATCTGCCACATCGTGG +
Preference number: 4 (lower is better)
Translates to: SDTPSGPQSLSGYLPHRGSPESI*LSATSW
Trigger: CCACGATGTGGCAGATAACCAGATAGACTCTGGGGA...GCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAATTCATCTGCACCAGCTaGAAGTGGGTAACTCCGATG +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQFICTS*KWVTPM
Trigger: CATCGGAGTTACCCACTTCCAGCTGGTGCAGATGAA...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTTCATCTGCACCAGCTaGAAGTGGGTAACTCCGATG +
Preference number: 4 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALFICTS*KWVTPM
Trigger: CATCGGAGTTACCCACTTCCAGCTGGTGCAGATGAA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTGTGTTCTGGGTGATCTaGCGCTTGGTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSVFWVI*RLVIIC
Trigger: ACAGATGATAACCAAGCGCCAGATCACCCAGAACAC...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATAGGCTTTTCTTAACATaGGGTTTAAGCGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHRLFLT*GLSGNL
Trigger: CAGATTACCGCTTAAACCCCATGTTAAGAAAAGCCT...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCATCTGAAGACAGGCGCTaGTCAGCATATCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QTLHQVPRVYLVICHIVASEDRR*SAYLSF
Trigger: GAAGCTGAGATATGCTGACCAGCGCCTGTCTTCAGA...TGCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCAGTGCAGCTCTTCAGCACATAGACTaGAGATCTCGTCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLLLLQHIDWRSRLSSAALQHID*RSRLSS
Trigger: ACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAG...AGCTGCACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGGCAGAAAGGTCAGGCTaGACTGCCTGTCACATCCTG +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMAERSG*TACHIL
Trigger: CAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGC...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACACTCCGGCTGGCAGTaGCGGGAGGCAGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSHSGWQ*REAVCA
Trigger: AGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTG...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACGGTGTTTACGCATACTaGGAAGGAGACTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: CWWATHQESRHRPESIIHGVYAY*EGDCRE
Trigger: CTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACC...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTGTGGTGGCGGGTGCCTaGAATCCCAGCTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLVVAGA*NPSYSG
Trigger: TCCTGAGTAGCTGGGATTCCAGGCACCCGCCACCAC...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAGTGGTGGCGGGTGCCTaGAATCCCAGCTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQVVAGA*NPSYSG
Trigger: TCCTGAGTAGCTGGGATTCCAGGCACCCGCCACCAC...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTACCTCTAGAGGGCTGTaGCGCACACTATGCATAAGT +
Preference number: 4 (lower is better)
Translates to: LPANHTRHVRRHLHVHDITSRGL*RTLCIS
Trigger: ACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGGCCTGTAATGCACTTTaGAAGGCCGAAGTGCACTTT +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMACNAL*KAEVHF
Trigger: AAAGTGCACTTCGGCCTTCCAAAGTGCATTACAGGC...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCAATGACCTCACCAGATaGCTTTGGGGAGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTNDLTR*LWGALH
Trigger: GTGAAGAGCTCCCCAAAGCCATCTGGTGAGGTCATT...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGAGCCCTGCTGGGCTCTaGGGTCCAGATGTCAACTCT +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQSPAGL*GPDVNS
Trigger: AGAGTTGACATCTGGACCCCAGAGCCCAGCAGGGCT...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGTTGGGAACACTGTGCTaGGGGAAGCTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQLGTLC*GKLPRK
Trigger: CTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAA...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGAGACTGTTTTCCGGATaGACTGGTTTGGGAACACTG +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMRLFSG*TGLGTL
Trigger: CAGTGTTCCCAAACCAGTCCATCCGGAAAACAGTCT...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGCTTTGGTGGTCAAGGTaGCTCTACCTGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKLWWSR*LYLSLS
Trigger: GCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGGTGATGTTGCCTCGGTaGTCCACCAAGCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQVMLPR*STKQET
Trigger: GGTTTCCTGCTTGGTGGATCACCGAGGCAACATCAC...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAATACCACCTCACCTTGTaGATGTGCATCCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQYHLTL*MCILFS
Trigger: GGAGAAAAGGATGCACATTCACAAGGTGAGGTGGTA...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTACCACCTCACCTTGTaGATGTGCATCCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALYHLTL*MCILFS
Trigger: GGAGAAAAGGATGCACATTCACAAGGTGAGGTGGTA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000562090.5
CDS-3UTR TCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGCCCGACAGCTTAGGATaGTCTCAGGGCTCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMPDSLG*SQGSEK
Trigger: TTTCTCTGAGCCCTGAGATCATCCTAAGCTGTCGGG...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTTCCAATCCCGGGAGATaGAATACTGCAGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LPANHTRHVRRHLHVHDISNPGR*NTAALR
Trigger: TCTTAGAGCTGCAGTATTTCATCTCCCGGGATTGGA...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTTCATCCAGATGGTCCTaGAGGCACTCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLASSRWS*RHSSSC
Trigger: ACAGGAGCTGGAGTGCCTTCAGGACCATCTGGATGA...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTCTGGTCTTCACAGTCTaGAGACAGGCGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPLVFTV*RQALVS
Trigger: GCTGACCAGCGCCTGTCTTCAGACTGTGAAGACCAG...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCACTGGAGATCTCGTCTaGGCAGTGCAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFTGDLV*AVQLEL
Trigger: CAGCTCCAGCTGCACTGCTCAGACGAGATCTCCAGT...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCAGGGCACAAGCAGTATaGAGTACCGGGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSRAQAV*STGSTK
Trigger: CTTTGTTGACCCGGTACTTCATACTGCTTGTGCCCT...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCCCTCCAGTGCTTCCATaGGACAGGACATTTGACGCC +
Preference number: 4 (lower is better)
Translates to: VFWVIWRLVIICLHLGSIPPVLP*DRTFDA
Trigger: GGCGTCAAATGTCCTGTCTCATGGAAGCACTGGAGG...GATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGTACAGATGCTCCCACTaGTCACAGAGAGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRYRCSH*SQRECS
Trigger: ACTACATTCTCTCTGTGATCAGTGGGAGCATCTGTA...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCATTGTAGCCTGTCCTTaGGCTCTCGTGTCACTCGCT +
Preference number: 4 (lower is better)
Translates to: TLEEAKHNLEALSELSPGIVACP*ALVSLA
Trigger: AGCGAGTGACACGAGAGCTCAAGGACAGGCTACAAT...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000205061.9
CDS-3UTR TCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTAGCAGCTTCCCTTGGTaGCTTGGCAGGGGGACAATC +
Preference number: 4 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFSSFPW*LGRGTI
Trigger: GATTGTCCCCCTGCCAAGTCACCAAGGGAAGCTGCT...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGATCCCAGACAGCTGTTaGCAATCAGGAAGACCCTAC +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKIPDSC*QSGRPY
Trigger: GTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGAT...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGAGGCAGAGAATTGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMRQRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCAATTCTCTGCCT...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAAGCTGCTGCTGCACGGTaGGGAGGAGGAGGACACCAT +
Preference number: 4 (lower is better)
Translates to: FFQTFDNLSVAILHSGTEAAAAR*GGGGHH
Trigger: ATGGTGTCCTCCTCCTCCTCACCGTGCAGCAGCAGC...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACGAGTTGCAGGTCAGGTaGGTTGGTTCTGGAAGTACC +
Preference number: 4 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHELQVR*VGSGST
Trigger: GGTACTTCCAGAACCAACTCACCTGACCTGCAACTC...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTTTGTTGCTCCAGGTGTaGTTAGGGCACACGCGGGTC +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPLLLQV*LGHTRV
Trigger: GACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAA...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCGGCACTTATACACTCTaGCCTCACCAGCTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: SDTPSGPQSLSGYLPHRGGTYTL*PHQLVY
Trigger: ATACACAAGCTGGTGAGGGCAGAGTGTATAAGTGCC...GCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR GCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTTTGGCGGGTTGTAAGTaGTTCTCGACACTTTTCACT +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSLAGCK*FSTLFT
Trigger: AGTGAAAAGTGTCGAGAAGCACTTACAACCCGCCAA...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp ACCAGCTGGAAGTGGGTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGCGGGAGATGAAATACTaGAGCTCTAAGAGACGGTGT +
Preference number: 4 (lower is better)
Translates to: TSWKWVTPMAHFSFMSFWREMKY*SSKRRC
Trigger: ACACCGTCTCTTAGAGCTGCAGTATTTCATCTCCCG...CCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTACCCACTTCCAGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR GCA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACGTCTATCTGGTTATCTaGCACATCGTGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNVYLVI*HIVAEV
Trigger: AACTTCTGCCACGATGTGGCAGATAACCAGATAGAC...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCCGAAAATCCTTCATCTaGACCAGCTGGAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFRKSFI*TSWKWV
Trigger: TACCCACTTCCAGCTGGTGCAGATGAAGGATTTTCG...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp ACCAGCTGGAAGTGGGTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGCGAAAATCCTTCATCTaGACCAGCTGGAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: TSWKWVTPMAHFSFMSFWRKSFI*TSWKWV
Trigger: TACCCACTTCCAGCTGGTGCAGATGAAGGATTTTCG...CCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTACCCACTTCCAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGTGCTCCTTGGCTTCCTaGAGAGTGTCATTGCGCACG +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQCSLAS*RVSLRT
Trigger: CGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCA...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGTGCTCCTTGGCTTCCTaGAGAGTGTCATTGCGCACG +
Preference number: 4 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRCSLAS*RVSLRT
Trigger: CGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCA...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTTTCAGGGACACCCTGTaGTCCTTGGCTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLAFRDTL*SLASCR
Trigger: TCTGCAGGAAGCCAAGGAGCACAGGGTGTCCCTGAA...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCTTCAGGGACACCCTGTaGTCCTTGGCTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTFRDTL*SLASCR
Trigger: TCTGCAGGAAGCCAAGGAGCACAGGGTGTCCCTGAA...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTTTTGGTGGCAGCGGGTaGTTAGCTGCTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LHGKIREAICWGHLCCVTFGGSG*LAASCF
Trigger: AAAACAAGAAGCAGCTAAGCACCCGCTGCCACCAAA...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATCCGCTTATCCTCCAGTaGTTCCATGAGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: SRVTRLVIRPHIRPIRNNPLILQ*FHETGH
Trigger: ATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGG...ATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCTGCTGGGGCCACCTTTaGTGCGTAACTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTCWGHL*CVTPHL
Trigger: GAGATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCA...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGTGCTGGGGCCACCTTTaGTGCGTAACTCCACATCTC +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQCWGHL*CVTPHL
Trigger: GAGATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCA...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCCGGAGACGTCATTACTTaGATGGCAAGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLQASYRSGSKRMSSVISGDVIT*MARSEK
Trigger: CTTCTCTGATCTTGCCATGCAAGTAATGACGTCTCC...GGAGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCGCTGAGGCAGAGAATTaGTTGAACCCAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LHTGGMRRDGQEYCFYKAAEAEN*LNPGGG
Trigger: TCCACCTCCTGGGTTCAAGCAATTCTCTGCCTCAGC...GGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCGCACTTAGAAAAACTTaGTCGGGGCCCTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFALRKT*SGPCLG
Trigger: CCCCAGGCAGGGCCCCGAGCAAGTTTTTCTAAGTGC...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAAGGCCAGTTCAGACTTTaGTGGCCTTGGCACTTAGAA +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQGQFRL*WPWHLE
Trigger: TTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCC...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTAGTGCATGGCTCCCCTaGCGGTGCTTCTTGCTAACG +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPSAWLP*RCFLLT
Trigger: CGTTAGCAAGAAGCACCGGCAGGGGAGCCATGCACT...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACGAAGGACACAAAGTTaGCCCCGGGACCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSRRTQS*PRDPGP
Trigger: AGGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCG...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATATTTGCAAACCTCTCTaGCCACAGATTCAAATTTGG +
Preference number: 4 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADICKPL*PQIQIW
Trigger: CCAAATTTGAATCTGTGGCCAGAGAGGTTTGCAAAT...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CTGGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATGGGCTCACAGGCTCTTGGTGTAGGATCCTTTaGACTTCAGCTCGGCACTCC +
Preference number: 4 (lower is better)
Translates to: LVICHIVAEVLNYGLTGSWCRIL*TSARHS
Trigger: GGAGTGCCGAGCTGAAGTCCAAAGGATCCTACACCA...AGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGATCAGGCACTTATCCTaGAGGGCAGGATCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMIRHLS*RAGSSL
Trigger: CAAGCTGGATCCTGCCCTCCAGGATAAGTGCCTGAT...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAATCCCCAGAGTCTATCTaGTTATCTGCCACATCGTGG +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQSPESI*LSATSW
Trigger: CCACGATGTGGCAGATAACCAGATAGACTCTGGGGA...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGTCCCCAGAGTCTATCTaGTTATCTGCCACATCGTGG +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKSPESI*LSATSW
Trigger: CCACGATGTGGCAGATAACCAGATAGACTCTGGGGA...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCTCGTTCATGTCCTTCTaGTGTTTGTTCTGTATCAGA +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSSFMSF*CLFCIR
Trigger: TCTGATACAGAACAAACACCAGAAGGACATGAACGA...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTTTAAATACTTTTTGGTaGCAGCGGGTGCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSLNTFW*QRVLSC
Trigger: GCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAA...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGTTAAATACTTTTTGGTaGCAGCGGGTGCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRLNTFW*QRVLSC
Trigger: GCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAA...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACAAGCTTAAATACTTTTTaGTGGCAGCGGGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTSLNTF*WQRVLS
Trigger: GCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCT...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACAGCTTAAATACTTTTTaGTGGCAGCGGGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNSLNTF*WQRVLS
Trigger: GCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCT...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp AGTTTGTCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGGTGTTCTGGGTGATCTaGCGCTTGGTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SLSGVCRKVRLDCLSHPEVFWVI*RLVIIC
Trigger: ACAGATGATAACCAAGCGCCAGATCACCCAGAACAC...CTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp TCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCGTGTTCTGGGTGATCTaGCGCTTGGTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SDTPSGPQSLSGYLPHRGVFWVI*RLVIIC
Trigger: ACAGATGATAACCAAGCGCCAGATCACCCAGAACAC...GCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCTCCAGGGCGGACTCCTaGATAATGATTCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LHTGGMRRDGQEYCFYKASRADS*IMIRIW
Trigger: CCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGA...GGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGAGAGAAGCCATCTGCTaGGGCCACCTTTGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRREAIC*GHLCCV
Trigger: TACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCT...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TGGCTGATTAGGGTGGAAACTGGAAAGCGTCACTGTCTCAGCAGAAGAAAGCAGGCCGAGGGCAGGCCTTaGTCTACATGGACAGTTTTA +
Preference number: 4 (lower is better)
Translates to: WLIRVETGKRHCLSRRKQAEGRP*STWTVL
Trigger: TAAAACTGTCCATGTAGACCAAGGCCTGCCCTCGGC...CTGCTTTCTTCTGCTGAGACAGTGACGCTTTCCAGTTTCCACCCTAATCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp AGTTTGTCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGCAACAGCAACAGCAATaGAAGTCCAACATGCACCCA +
Preference number: 4 (lower is better)
Translates to: SLSGVCRKVRLDCLSHPEQQQQQ*KSNMHP
Trigger: TGGGTGCATGTTGGACTTCCATTGCTGTTGCTGTTG...CTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAGGCCGAAGTGCACTTTaGCCGAAGTGGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQGRSAL*PKWATL
Trigger: CAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCC...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTCACCAGATGGCTTTaGGGAGCTCTTCACCCTAAA +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLLTRWL*GALHPK
Trigger: TTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCATACATGTGTCCTGGTaGAGCAGAGGGAGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTIHVSW*SRGSGR
Trigger: TCTCCCGCTCCCTCTGCTCCACCAGGACACATGTAT...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTGTACAAACTGGGCACTaGATAGGTAGTTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSVQTGH*IGSSFG
Trigger: ACCAAAGGAACTACCTATCCAGTGCCCAGTTTGTAC...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGGTACAAACTGGGCACTaGATAGGTAGTTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRVQTGH*IGSSFG
Trigger: ACCAAAGGAACTACCTATCCAGTGCCCAGTTTGTAC...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
3UTR CAA 72 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTaGACAATCAGGAAGACCCTACAAGCAGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQL*TIRKTLQAGPR
Trigger: CCTCGGTCCTGCTTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
3UTR CAA 72 bp CCGATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTaGTTCTGTATCAGACACTCCATCAGGTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PMAHFSFMSFWC*FCIRHSIRSPE
Trigger: CTCTGGGGACCTGATGGAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTTTTTGCAGTCATCCATaGAGCCACAGATTAAACGGT +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSFCSHP*SHRLNG
Trigger: ACCGTTTAATCTGTGGCTTCATGGATGACTGCAAAA...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGTACCACCTCACCTTGTaGATGTGCATCCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLYHLTL*MCILFS
Trigger: GGAGAAAAGGATGCACATTCACAAGGTGAGGTGGTA...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGGGCAGGATCCAGCTTaGCATCCATGGCACGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSGQDPA*HPWHAG
Trigger: ACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CTGGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATGGGCTCACAGGCTCTTCGTGGCAGAAGTTCTaGATTATGGGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LVICHIVAEVLNYGLTGSSWQKF*IMGSQA
Trigger: AGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGA...AGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTGCCTGTCACATCCTaGGACCACACTAAACCTTTA +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLLPVTS*DHTKPL
Trigger: TAAAGGTTTAGTGTGGTCTCAGGATGTGACAGGCAG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAACTGCCTGTCACATCCTaGGACCACACTAAACCTTTA +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQLPVTS*DHTKPL
Trigger: TAAAGGTTTAGTGTGGTCTCAGGATGTGACAGGCAG...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAGGAGAAGCTCCATTGTaGACAGTTCGTCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQGEAPL*TVRLVL
Trigger: AAGAACAAGACGAACTGTTCACAATGGAGCTTCTCC...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGGAGTTGCAGGTCAGGTaGGTTGGTTCTGGAAGTACC +
Preference number: 4 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRELQVR*VGSGST
Trigger: GGTACTTCCAGAACCAACTCACCTGACCTGCAACTC...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTAAAAATAAAGCAAAGTaGGTCAAACCTCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSKNKAK*VKPLAP
Trigger: GGGAGCCAGAGGTTTGACTCACTTTGCTTTATTTTT...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCGGGTTCTCTTTCTTCTaGTTCTTTCACCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTGFSFF*FFHQAF
Trigger: AAAGGCCTGGTGAAAGAAGCAGAAGAAAGAGAACCC...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGCACTTATACACTCTaGCCTCACCAGCTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKGTYTL*PHQLVY
Trigger: ATACACAAGCTGGTGAGGGCAGAGTGTATAAGTGCC...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTTTGGCGGGTTGTAAGTaGTTCTCGACACTTTTCACT +
Preference number: 4 (lower is better)
Translates to: LPANHTRHVRRHLHVHDILAGCK*FSTLFT
Trigger: AGTGAAAAGTGTCGAGAAGCACTTACAACCCGCCAA...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTTGGCGGGTTGTAAGTaGTTCTCGACACTTTTCACT +
Preference number: 4 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALLAGCK*FSTLFT
Trigger: AGTGAAAAGTGTCGAGAAGCACTTACAACCCGCCAA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000562090.5
CDS-3UTR GCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGATCAATGCGGTAATCTaGACCAGGGTCAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMINAVI*TRVSLL
Trigger: CAGGAGACTGACCCTGGTGCAGATTACCGCATTGAT...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTGCAGAGTGTCATTaGGCACGGTCGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSPAECH*ARSCSG
Trigger: GCCTGAGCACGACCGTGCGCAATGACACTCTGCAGG...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GTCTCCTGCAGCTTAAATACTTTTTGGTGGCAGCGGGTGCTTAGCTGCTTCTTGTGGGGCCACCTTTGCTaGGTAACTCCACATCTCAAT +
Preference number: 4 (lower is better)
Translates to: VSCSLNTFWWQRVLSCFLWGHLC*VTPHLN
Trigger: ATTGAGATGTGGAGTTACGCAGCAAAGGTGGCCCCA...CAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTAGTGCACGTGGACTGTaGAGAGCAGAGGCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPSARGL*RAEARV
Trigger: CACTCTTGCCTCTGCTCTGCACAGTCCACGTGCACT...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGGCTGAGGCAGAGAATTaGTTGAACCCAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQAEAEN*LNPGGG
Trigger: TCCACCTCCTGGGTTCAAGCAATTCTCTGCCTCAGC...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAAGACAGCCAAAGGCCTaGAGTGTGTTCAAGTCAATA +
Preference number: 4 (lower is better)
Translates to: FTHTGKETAERKDTPPGQRQPKA*SVFKSI
Trigger: TATTGACTTGAACACACTGCAGGCCTTTGGCTGTCT...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCAGACAGCCAAAGGCCTaGAGTGTGTTCAAGTCAATA +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVARQPKA*SVFKSI
Trigger: TATTGACTTGAACACACTGCAGGCCTTTGGCTGTCT...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCAGCCACCCGGAGAATaGCTTTCTTGCAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTQPPGE*LSCRVQ
Trigger: CTGAACTCTGCAAGAAAGCCATTCTCCGGGTGGCTG...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGTGGGCAATCAGCTTTTaGCGGGTTGTAAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKWAISF*RVVSAS
Trigger: AGAAGCACTTACAACCCGCCAAAAGCTGATTGCCCA...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTACAAGTAGGAGAGCCTaGCTTCACGCGATCGCGGAA +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLTSRRA*LHAIAE
Trigger: TTCCGCGATCGCGTGAAGCCAGGCTCTCCTACTTGT...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTTGTTTGCAGGCTGTCTaGATTACAGATTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: GLTELPICGRSSIVNSSSCLQAV*ITDSQA
Trigger: AGCTTGTGAATCTGTAATCCAGACAGCCTGCAAACA...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCTTCATCTGCACCAGCTaGAAGTGGGTAACTCCGATG +
Preference number: 4 (lower is better)
Translates to: TLEEAKHNLEALSELSPGFICTS*KWVTPM
Trigger: CATCGGAGTTACCCACTTCCAGCTGGTGCAGATGAA...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTTTAAATACTTTTTGGTaGCAGCGGGTGCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSLNTFW*QRVLSC
Trigger: GCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAA...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGTCCAGGGCGGACTCCTaGATAATGATTCGGATCTGG +
Preference number: 4 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRSRADS*IMIRIW
Trigger: CCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGA...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTTCAGCACATAGACTaGAGATCTCGTCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLLQHID*RSRLSS
Trigger: ACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGCTTCAGCACATAGACTaGAGATCTCGTCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKLQHID*RSRLSS
Trigger: ACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAG...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTAGAGAAGCCATCTGCTaGGGCCACCTTTGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFREAIC*GHLCCV
Trigger: TACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCT...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGCAATGCCTACTAGAGTaGGTACACGCAGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKQCLLE*VHAANG
Trigger: TCCATTTGCTGCGTGTACCCACTCTAGTAGGCATTG...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCAGGAATGAGGCGGGATaGCCAAGAATATTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVARNEAG*PRILLL
Trigger: TAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCT...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGAGGAATGAGGCGGGATaGCCAAGAATATTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALRNEAG*PRILLL
Trigger: TAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCT...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCAAGTCACAGGGACACTaGCATGAACTGGTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSKSQGH*HELVSP
Trigger: TGGACTTACCAGTTCATGCCAGTGTCCCTGTGACTT...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCAACAGAATCTTCTCTTaGGAAGGCCAAGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFNRIFS*EGQGKS
Trigger: TGACTTCCCTTGGCCTTCCCAAGAGAAGATTCTGTT...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTCACAGGCCTGGAGGATaGGAGGATAGGAGACACTTC +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLHRPGG*EDRRHF
Trigger: GAAGTGTCTCCTATCCTCCCATCCTCCAGGCCTGTG...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTAAAATTATCCAGGCATaGTGGTGCATGCCCGTAATC +
Preference number: 4 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIKIIQA*WCMPVI
Trigger: GATTACGGGCATGCACCACCATGCCTGGATAATTTT...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGCCTCTCAGTGCAGATaGATGGACTGTTCAACTTCA +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKASQCR*MDCSTS
Trigger: TGAAGTTGAACAGTCCATCCATCTGCACTGAGAGGC...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCTCGTGGCAGAAGTTCTaGATTATGGGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTSWQKF*IMGSQA
Trigger: AGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGA...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCTCGTGGCAGAAGTTCTaGATTATGGGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: VFWVIWRLVIICLHLGSISWQKF*IMGSQA
Trigger: AGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGA...GATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGCGGAACAGAAGTTTTTaGTGTCACTCTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKRNRSF*CHSCRL
Trigger: AAGCCTGCAAGAGTGACATCAAAAACTTCTGTTCCG...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAACGGAACAGAAGTTTTTaGTGTCACTCTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQRNRSF*CHSCRL
Trigger: AAGCCTGCAAGAGTGACATCAAAAACTTCTGTTCCG...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGAGGGCACAAGCAGTATaGAGTACCGGGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRRAQAV*STGSTK
Trigger: CTTTGTTGACCCGGTACTTCATACTGCTTGTGCCCT...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCAGACACTCTCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: DGTLLVHVLLVFVLYQTLSQSGH*GAFCTR
Trigger: CCGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGA...GAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGTACAGATGCTCCCACTaGTCACAGAGAGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLYRCSH*SQRECS
Trigger: ACTACATTCTCTCTGTGATCAGTGGGAGCATCTGTA...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTTCTCAGCCAGTTGACTaGCCTATAAGGCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPSQPVD*PIRPGT
Trigger: GGTTCCTGGCCTTATAGGTCAGTCAACTGGCTGAGA...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTCATTTCTCAGCCAGTTaGCTGACCTATAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLAHFSAS*LTYKAR
Trigger: CCTGGCCTTATAGGTCAGTCAACTGGCTGAGAAATG...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCAGCCTGGCAACGGAGTaGGACTCCATCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFSLATE*DSISET
Trigger: TGTTTCTGAGATGGAGTCTCACTCCGTTGCCAGGCT...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCCATGCTTTGCTTCAATaGAGCGAGGAGACCACAGAA +
Preference number: 4 (lower is better)
Translates to: TLEEAKHNLEALSELSPGHALLQ*SEETTE
Trigger: TTCTGTGGTCTCCTCGCTTCATTGAAGCAAAGCATG...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCGGGTTCTCTTTCTTCTaGTTCTTTCACCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSGFSFF*FFHQAF
Trigger: AAAGGCCTGGTGAAAGAAGCAGAAGAAAGAGAACCC...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000562090.5
CDS-3UTR GCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGAGTCTTCCATCAACATaGGTCGGTAATCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWSLPST*VGNPAS
Trigger: AGATGCTGGATTACCGACGCATGTTGATGGAAGACT...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000562090.5
CDS-3UTR GCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATCAATGCGGTAATCTaGACCAGGGTCAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRINAVI*TRVSLL
Trigger: CAGGAGACTGACCCTGGTGCAGATTACCGCATTGAT...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR GCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCTTCCCTGTTCCTCAGTaGGGTAGGCGTGTCTGTATA +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTFPVPQ*GRRVCI
Trigger: TATACAGACACGCCTACCGCACTGAGGAACAGGGAA...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCGTCTATCTGGTTATCTaGCACATCGTGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSVYLVI*HIVAEV
Trigger: AACTTCTGCCACGATGTGGCAGATAACCAGATAGAC...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCCGAAAATCCTTCATCTaGACCAGCTGGAAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LHTGGMRRDGQEYCFYKARKSFI*TSWKWV
Trigger: TACCCACTTCCAGCTGGTGCAGATGAAGGATTTTCG...GGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGGTCAACAAAGATGTCTaGTTTGCTTTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRVNKDV*FAFLQH
Trigger: ATGCTGAAGGAAAGCAAAGCAGACATCTTTGTTGAC...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTTCCTACTGTACACACTaGTCTCTTGTGCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLASYCTH*SLVQPL
Trigger: CAGTGGCTGCACAAGAGAGCAGTGTGTACAGTAGGA...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCTCCTACTGTACACACTaGTCTCTTGTGCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTSYCTH*SLVQPL
Trigger: CAGTGGCTGCACAAGAGAGCAGTGTGTACAGTAGGA...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCAACATCCATCCTACCTaGAAACCACACCAGGCACGT +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTNIHPT*KPHQAR
Trigger: ACGTGCCTGGTGTGGTTTGCAGGTAGGATGGATGTT...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCGGCCCTGTTTTGTTTTaGCAAATGAGGGACTTAATG +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTGPVLF*QMRDLM
Trigger: CATTAAGTCCCTCATTTGGCAAAACAAAACAGGGCC...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACGGCCCTGTTTTGTTTTaGCAAATGAGGGACTTAATG +
Preference number: 4 (lower is better)
Translates to: CWWATHQESRHRPESIIHGPVLF*QMRDLM
Trigger: CATTAAGTCCCTCATTTGGCAAAACAAAACAGGGCC...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCACAAAACCACTTAGGTaGTGCCCAAATGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTTKPLR*CPNGEK
Trigger: TTTCTCACCATTTGGGCAGCACCTAAGTGGTTTTGT...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCTGTTTGCAGGCTGTCTaGATTACAGATTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVACLQAV*ITDSQA
Trigger: AGCTTGTGAATCTGTAATCCAGACAGCCTGCAAACA...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGTTAAATACTTTTTGGTaGCAGCGGGTGCTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKLNTFW*QRVLSC
Trigger: GCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAA...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTGGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATGGGCTCACAGGCTCTCTTCAGCACATAGACTaGAGATCTCGTCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LVICHIVAEVLNYGLTGSLQHID*RSRLSS
Trigger: ACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAG...AGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCAATGTAGTTCTTAGATaGAGACGTCATTACTTGCAT +
Preference number: 4 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSNVVLR*RRHYLH
Trigger: ATGCAAGTAATGACGTCTCCATCTAAGAACTACATT...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGACAAAGGAGCTTGTCTaGGAAGTTTGTCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWTKELV*EVCLEC
Trigger: ACACTCCAGACAAACTTCCCAGACAAGCTCCTTTGT...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGTCTGCAGACAACGAATaGGATTTTCTCTCAATTCAG +
Preference number: 4 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMSADNE*DFLSIQ
Trigger: CTGAATTGAGAGAAAATCCCATTCGTTGTCTGCAGA...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCAGACTTTGCTGGCCTTaGCACTTAGAAAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTRLCWP*HLEKLA
Trigger: AGCAAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCT...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCTTCTATTACTGTTGGTaGGCTACACATCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAFYYCW*ATHQES
Trigger: ACTCTCCTGATGTGTAGCCCACCAACAGTAATAGAA...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCTACTTCTATTACTGTTaGTGGGCTACACATCAGGAG +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAYFYYC*WATHQE
Trigger: CTCCTGATGTGTAGCCCACCAACAGTAATAGAAGTA...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGAGAGCTCCCCATCTGTaGGAGAAGCTCCATTGTGAA +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQRAPHL*EKLHCE
Trigger: TTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCT...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACACAGCACTCCAGCCTaGCAACGGAGTGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSHSTPA*QRSETP
Trigger: TGGAGTCTCACTCCGTTGCCAGGCTGGAGTGCTGTG...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGGCCGAAGTGCACTTTaGCCGAAGTGGGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSGRSAL*PKWATL
Trigger: CAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTATGTCAACTCTACATTaGAGGAGGCAAAACACAATC +
Preference number: 4 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSMSTLH*RRQNTI
Trigger: GATTGTGTTTTGCCTCCTCCAATGTAGAGTTGACAT...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCGAAGAGCGAGGTGAGTaGGGATGCTATACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VTPMAHFSFMSFWCLFCIEERGE*GCYTRG
Trigger: CCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC...GATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAAGTGATGTTGCCTCGGTaGTCCACCAAGCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: FFQTFDNLSVAILHSGTEVMLPR*STKQET
Trigger: GGTTTCCTGCTTGGTGGATCACCGAGGCAACATCAC...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTGACACTGATACTCAGTaGTGTTGCCTCGGTGATCCA +
Preference number: 4 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFDTDTQ*CCLGDP
Trigger: TGGATCACCGAGGCAACATCACTGAGTATCAGTGTC...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTAAATGCCGGTCTAAGTaGAAGTCATCCGATGACAGC +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLAKCRSK*KSSDDS
Trigger: GCTGTCATCGGATGACTTTCACTTAGACCGGCATTT...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCTGGCCAATGAATAACTaGCTTTATAATCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFWPMNN*LYNPGQ
Trigger: TTGCCCAGGATTATAAAGTCAGTTATTCATTGGCCA...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGCTGATTCTAACTCAGTaGGGTTGCCAACTATATCTC +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWLILTQ*GCQLYL
Trigger: GAGATATAGTTGGCAACCTCACTGAGTTAGAATCAG...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGAGCAAGGCTTCTATTTaGATATCCTCTGATTCTAAC +
Preference number: 4 (lower is better)
Translates to: EWRLDGTTQWTSANALTRSKASI*ISSDSN
Trigger: GTTAGAATCAGAGGATATTCAAATAGAAGCCTTGCT...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000567951.5
CDS-3UTR TCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCAATCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCA +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTNLCSG*SGAWLS
Trigger: TGATAACCAAGCGCCAGATCACCCAGAACACAGATT...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTTAGTCAGGATACCGTaGCAGAATTTAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALLVRIP*QNLGMS
Trigger: TGACATTCCTAAATTCTGTCACGGTATCCTGACTAA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTCCAGTTTTAGGAGACTaGAGCATCCCAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLPVLGD*SIPDSC
Trigger: ACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGG...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TGGCTGATTAGGGTGGAAACTGGAAAGCGTCACTGTCTCAGCAGAAGAAAGCAGGGAGAAGCTCCATTGTaGACAGTTCGTCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: WLIRVETGKRHCLSRRKQGEAPL*TVRLVL
Trigger: AAGAACAAGACGAACTGTTCACAATGGAGCTTCTCC...CTGCTTTCTTCTGCTGAGACAGTGACGCTTTCCAGTTTCCACCCTAATCAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCATTCCAGAAGCCACACTaGCATAAGAACAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSFQKPH*HKNRIF
Trigger: GAAGATTCTGTTCTTATGTCAGTGTGGCTTCTGGAA...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTTGGCCTCTCCCCAGATaGCTCACTATAGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLWPLPR*LTIVGT
Trigger: AGTTCCTACTATAGTGAGTCATCTGGGGAGAGGCCA...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAACAAAATGCACATAATTaGGGCCAAGGTGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQQNAHN*GQGGWT
Trigger: GGTCCACCCACCTTGGCCTCAATTATGTGCATTTTG...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGGACTTATCTATTATCTaGAGTCTGTGGAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLDLSII*SLWRKD
Trigger: GTCCTTCCTCCACAGACTTCAGATAATAGATAAGTC...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGCTGAGAAGAGCGAGGTaGGTGGGGATGCTATACAAG +
Preference number: 4 (lower is better)
Translates to: VIWRLVIICLHLGSINSLLRRAR*VGMLYK
Trigger: CTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAG...CAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAGGCTCCCTCACATCCTaGAGGCACTCGAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTGSLTS*RHSSTA
Trigger: GGCGGTGCTCGAGTGCCTGCAGGATGTGAGGGAGCC...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCGGGTTCTCTTTCTTCTaGTTCTTTCACCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LHTGGMRRDGQEYCFYKAGFSFF*FFHQAF
Trigger: AAAGGCCTGGTGAAAGAAGCAGAAGAAAGAGAACCC...GGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGCGGGAGATGAAATACTaGAGCTCTAAGAGACGGTGT +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQREMKY*SSKRRC
Trigger: ACACCGTCTCTTAGAGCTGCAGTATTTCATCTCCCG...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCGGGAGATGAAATACTaGAGCTCTAAGAGACGGTGT +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTREMKY*SSKRRC
Trigger: ACACCGTCTCTTAGAGCTGCAGTATTTCATCTCCCG...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCTTTGGTGGCAGCGGGTaGTTAGCTGCTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTFGGSG*LAASCF
Trigger: AAAACAAGAAGCAGCTAAGCACCCGCTGCCACCAAA...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGCAAAGATGTCTGCTTTaGTTTCCTTCAGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLQRCLL*FPSACL
Trigger: TAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTG...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TCCTTTTTACACAATTCTGTTTTGATCTTGAGCAGGTTGACCTTGAGGCACTCCGCCAGGGGTGATGGCTaGGCAGTGGTGTTTAATGTC +
Preference number: 4 (lower is better)
Translates to: SFLHNSVLILSRLTLRHSARGDG*AVVFNV
Trigger: GACATTAAACACCACTGCGCAGCCATCACCCCTGGC...GGAGTGCCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATTGTGTAAAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAACCGCTTATCCTCCAGTaGTTCCATGAGACAGGACAT +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQPLILQ*FHETGH
Trigger: ATGTCCTGTCTCATGGAAGCACTGGAGGATAAGCGG...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAATGGGGCCACCTTTGCTaGGTAACTCCACATCTCAAT +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQWGHLC*VTPHLN
Trigger: ATTGAGATGTGGAGTTACGCAGCAAAGGTGGCCCCA...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CTGGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATGGGCTCACAGGCTCTGGAGACGTCATTACTTaGATGGCAAGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LVICHIVAEVLNYGLTGSGDVIT*MARSEK
Trigger: CTTCTCTGATCTTGCCATGCAAGTAATGACGTCTCC...AGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAGCCACTGTGATCTCATaGCCCAAACTCAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQATVIS*PKLNQR
Trigger: CCTTTGGTTGAGTTTGGGGCATGAGATCACAGTGGC...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGAGGGACTTAATGAGTaGGGCCAGTTCAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPEGLNE*GQFRLC
Trigger: GCAAAGTCTGAACTGGCCGCACTCATTAAGTCCCTC...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTAATGGAAGTCCAACATaGACCCAGGTGAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPNGSPT*TQVKAS
Trigger: TGAGGCCTTCACCTGGGTGCATGTTGGACTTCCATT...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTTCAAGTCAATACCTaGTCACTCAACATTAGCTCA +
Preference number: 4 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTVQVNT*SLNISS
Trigger: TGAGCTAATGTTGAGTGAGCAGGTATTGACTTGAAC...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp TCCTTTTTACACAATTCTGTTTTGATCTTGAGCAGGTTGACCTTGAGGCACTCCACAAGTAGGAGAGCCTaGCTTCACGCGATCGCGGAA +
Preference number: 4 (lower is better)
Translates to: SFLHNSVLILSRLTLRHSTSRRA*LHAIAE
Trigger: TTCCGCGATCGCGTGAAGCCAGGCTCTCCTACTTGT...GGAGTGCCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATTGTGTAAAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CCA 90 bp GTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCACATCCATGGCACGCTaGTGTAGGATCCTTTGGACT +
Preference number: 4 (lower is better)
Translates to: VTPMAHFSFMSFWCLFCITSMAR*CRILWT
Trigger: AGTCCAAAGGATCCTACACCAGCGTGCCATGGATGT...GATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp GATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCAGACACTCACATCCATGGCACGCTaGTGTAGGATCCTTTGGACT +
Preference number: 4 (lower is better)
Translates to: DGTLLVHVLLVFVLYQTLTSMAR*CRILWT
Trigger: AGTCCAAAGGATCCTACACCAGCGTGCCATGGATGT...GAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAATCTGAAGACAGGCGCTaGTCAGCATATCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQSEDRR*SAYLSF
Trigger: GAAGCTGAGATATGCTGACCAGCGCCTGTCTTCAGA...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCAGACACTCTCTGAAGACAGGCGCTaGTCAGCATATCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DGTLLVHVLLVFVLYQTLSEDRR*SAYLSF
Trigger: GAAGCTGAGATATGCTGACCAGCGCCTGTCTTCAGA...GAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCATAATGATTCGGATCTaGTCTTCACAGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTIMIRI*SSQSED
Trigger: GTCTTCAGACTGTGAAGACCAGATCCGAATCATTAT...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGCAGAAAGGTCAGGCTaGACTGCCTGTCACATCCTG +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSAERSG*TACHIL
Trigger: CAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCTCTGCAGACAACGAATaGGATTTTCTCTCAATTCAG +
Preference number: 4 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFSADNE*DFLSIQ
Trigger: CTGAATTGAGAGAAAATCCCATTCGTTGTCTGCAGA...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAAGACTTTGCTGGCCTTaGCACTTAGAAAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSRLCWP*HLEKLA
Trigger: AGCAAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCT...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCAGTTCAGACTTTGCTaGCCTTGGCACTTAGAAAAA +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLQFRLC*PWHLEK
Trigger: TTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTG...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTAGAGCTCCCCATCTGTaGGAGAAGCTCCATTGTGAA +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLRAPHL*EKLHCE
Trigger: TTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCT...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCAGACTGTTTTCCGGATaGACTGGTTTGGGAACACTG +
Preference number: 4 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTRLFSG*TGLGTL
Trigger: CAGTGTTCCCAAACCAGTCCATCCGGAAAACAGTCT...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTGGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATGGGCTCACAGGCTCTGTACAAACTGGGCACTaGATAGGTAGTTCCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LVICHIVAEVLNYGLTGSVQTGH*IGSSFG
Trigger: ACCAAAGGAACTACCTATCCAGTGCCCAGTTTGTAC...AGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTTTTATTTCTGCTGAAGCTGCGATaGCTGAGGCAGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLVIICLHLGSINSLFLFLLKLR*LRQLGQ
Trigger: CTGCCCCAGCTGCCTCAGTCATCGCAGCTTCAGCAG...AAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCTTTTGCAGTCATCCATaGAGCCACAGATTAAACGGT +
Preference number: 4 (lower is better)
Translates to: LHTGGMRRDGQEYCFYKAFCSHP*SHRLNG
Trigger: ACCGTTTAATCTGTGGCTTCATGGATGACTGCAAAA...GGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp GTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCTACAGATGCTCCCACTaGTCACAGAGAGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: VFWVIWRLVIICLHLGSIYRCSH*SQRECS
Trigger: ACTACATTCTCTCTGTGATCAGTGGGAGCATCTGTA...GATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTGCACCTCCATGTACATaGCATTCCTGGCTCTTGATA +
Preference number: 4 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFAPPCT*HSWLLI
Trigger: TATCAAGAGCCAGGAATGTCATGTACATGGAGGTGC...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AAAGACATAACCCCATTGCCCAAATCAAGCCTGGAGGAGATGCGTTACTATATATCTCAGCCAGTTGACTaGCCTATAAGGCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: KDITPLPKSSLEEMRYYISQPVD*PIRPGT
Trigger: GGTTCCTGGCCTTATAGGTCAGTCAACTGGCTGAGA...TATATAGTAACGCATCTCCTCCAGGCTTGATTTGGGCAATGGGGTTATGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp TGGCTGATTAGGGTGGAAACTGGAAAGCGTCACTGTCTCAGCAGAAGAAAGCAGGACTTATCTATTATCTaGAGTCTGTGGAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: WLIRVETGKRHCLSRRKQDLSII*SLWRKD
Trigger: GTCCTTCCTCCACAGACTTCAGATAATAGATAAGTC...CTGCTTTCTTCTGCTGAGACAGTGACGCTTTCCAGTTTCCACCCTAATCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp CGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTTTTATTTGGGTCACGTCCTCCCTaGAGGACTCTTCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: RLVIICLHLGSINSLFLFGSRPP*RTLPPP
Trigger: TGGCGGAGGAAGAGTCCTGCAGGGAGGACGTGACCC...AAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACCAAAGATGTCTGCTTTaGTTTCCTTCAGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: CWWATHQESRHRPESIIHQRCLL*FPSACL
Trigger: TAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTG...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCAAAGATGTCTGCTTTaGTTTCCTTCAGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSQRCLL*FPSACL
Trigger: TAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTG...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGGTCAACAAAGATGTCTaGTTTGCTTTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLVNKDV*FAFLQH
Trigger: ATGCTGAAGGAAAGCAAAGCAGACATCTTTGTTGAC...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACATGGCTCCCCTGCCGGTaGTTCTTGCTAACGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTWLPCR*FLLTGL
Trigger: CAAGCCCGTTAGCAAGAAGCACCGGCAGGGGAGCCA...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAGTTCAAGTCAATACCTaGTCACTCAACATTAGCTCA +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSVQVNT*SLNISS
Trigger: TGAGCTAATGTTGAGTGAGCAGGTATTGACTTGAAC...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCCACAGCACCAGATGCTaGATTTTACAAAACCACTTA +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSHSTRC*ILQNHL
Trigger: TAAGTGGTTTTGTAAAATGCAGCATCTGGTGCTGTG...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACACTTTCCGGAGGTCTCTaGCCAGTGCACTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTLSGGL*PVHCRG
Trigger: CCCCCTGCAGTGCACTGGGCAGAGACCTCCGGAAAG...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAATTTGCAAACCTCTCTaGCCACAGATTCAAATTTGG +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSICKPL*PQIQIW
Trigger: CCAAATTTGAATCTGTGGCCAGAGAGGTTTGCAAAT...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGATTTGCAAACCTCTCTaGCCACAGATTCAAATTTGG +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWICKPL*PQIQIW
Trigger: CCAAATTTGAATCTGTGGCCAGAGAGGTTTGCAAAT...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp AAAGACATAACCCCATTGCCCAAATCAAGCCTGGAGGAGATGCGTTACTATATAATCAGGCACTTATCCTaGAGGGCAGGATCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KDITPLPKSSLEEMRYYIIRHLS*RAGSSL
Trigger: CAAGCTGGATCCTGCCCTCCAGGATAAGTGCCTGAT...TATATAGTAACGCATCTCCTCCAGGCTTGATTTGGGCAATGGGGTTATGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAAATCAGGCACTTATCCTaGAGGGCAGGATCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: FFQTFDNLSVAILHSGTEIRHLS*RAGSSL
Trigger: CAAGCTGGATCCTGCCCTCCAGGATAAGTGCCTGAT...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTCGTTCATGTCCTTCTaGTGTTTGTTCTGTATCAGA +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWSFMSF*CLFCIR
Trigger: TCTGATACAGAACAAACACCAGAAGGACATGAACGA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTAGCTTAAATACTTTTTaGTGGCAGCGGGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLASLNTF*WQRVLS
Trigger: GCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCT...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACCTCACCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGAGGCTTTTCTTAACATaGGGTTTAAGCGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: TSPDGFGELFTLKIRSGLRLFLT*GLSGNL
Trigger: CAGATTACCGCTTAAACCCCATGTTAAGAAAAGCCT...CAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGAGGCTTTTCTTAACATaGGGTTTAAGCGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWRLFLT*GLSGNL
Trigger: CAGATTACCGCTTAAACCCCATGTTAAGAAAAGCCT...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGATAATGATTCGGATCTaGTCTTCACAGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKIMIRI*SSQSED
Trigger: GTCTTCAGACTGTGAAGACCAGATCCGAATCATTAT...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCATAATGATTCGGATCTaGTCTTCACAGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSIMIRI*SSQSED
Trigger: GTCTTCAGACTGTGAAGACCAGATCCGAATCATTAT...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGTGATGGCTGCGCAGTaGTGTTTAATGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSVMAAQ*CLMSRA
Trigger: TGCCCTGGACATTAAACACCACTGCGCAGCCATCAC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACAATGTAGTTCTTAGATaGAGACGTCATTACTTGCAT +
Preference number: 4 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNNVVLR*RRHYLH
Trigger: ATGCAAGTAATGACGTCTCCATCTAAGAACTACATT...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGACTTCCAAGGTTCCTaGTCCAGCTTCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPDFQGS*SSFLLL
Trigger: AAGAAGAAGGAAGCTGGACCAGGAACCTTGGAAGTC...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCCCTAAAGATTCGGTCTaGTTTGCTAATGACTTATCT +
Preference number: 4 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAPKDSV*FANDLS
Trigger: AGATAAGTCATTAGCAAACCAGACCGAATCTTTAGG...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAACTTTGGTGGTCAAGGTaGCTCTACCTGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: FFQTFDNLSVAILHSGTELWWSR*LYLSLS
Trigger: GCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
3UTR CAA 72 bp AGAGAGAATGTAGTTCTTAGATGGAGACGTCATTACTaGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RENVVLRWRRHY*HGKIREAICWG
Trigger: GCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCATCTAAGAACTACATTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCTTTTGCAGTCATCCATaGAGCCACAGATTAAACGGT +
Preference number: 4 (lower is better)
Translates to: VFWVIWRLVIICLHLGSIFCSHP*SHRLNG
Trigger: ACCGTTTAATCTGTGGCTTCATGGATGACTGCAAAA...GATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACTGGCCAATGAATAACTaGCTTTATAATCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHWPMNN*LYNPGQ
Trigger: TTGCCCAGGATTATAAAGTCAGTTATTCATTGGCCA...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR TCA 90 bp AGAGAGGAAGGATACCCCACCCGGTCAAACAGTGAACATCCATCCTACCTGCAAAGCAAGGCTTCTATTTaGATATCCTCTGATTCTAAC +
Preference number: 4 (lower is better)
Translates to: REEGYPTRSNSEHPSYLQSKASI*ISSDSN
Trigger: GTTAGAATCAGAGGATATTCAAATAGAAGCCTTGCT...TTGCAGGTAGGATGGATGTTCACTGTTTGACCGGGTGGGGTATCCTTCCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGAGCAAGGCTTCTATTTaGATATCCTCTGATTCTAAC +
Preference number: 4 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWSKASI*ISSDSN
Trigger: GTTAGAATCAGAGGATATTCAAATAGAAGCCTTGCT...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000567951.5
CDS-3UTR TCA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACTTAGTCAGGATACCGTaGCAGAATTTAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHLVRIP*QNLGMS
Trigger: TGACATTCCTAAATTCTGTCACGGTATCCTGACTAA...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp TCCTTTTTACACAATTCTGTTTTGATCTTGAGCAGGTTGACCTTGAGGCACTCCAGGGCACAAGCAGTATaGAGTACCGGGTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: SFLHNSVLILSRLTLRHSRAQAV*STGSTK
Trigger: CTTTGTTGACCCGGTACTTCATACTGCTTGTGCCCT...GGAGTGCCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATTGTGTAAAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTTACAGATGCTCCCACTaGTCACAGAGAGAATGTAGT +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLYRCSH*SQRECS
Trigger: ACTACATTCTCTCTGTGATCAGTGGGAGCATCTGTA...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACACAACATGCACCCAGGTaGAGGCCTCACAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTQHAPR*RPHRAP
Trigger: GGGAGCTCTGTGAGGCCTTCACCTGGGTGCATGTTG...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGTGCAGTTAGAGGGATaGGCAACCAAAGACCAATGG +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSVQLEG*ATKDQW
Trigger: CCATTGGTCTTTGGTTGCTCATCCCTCTAACTGCAC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCCTTTTTACACAATTCTGTTTTGATCTTGAGCAGGTTGACCTTGAGGCACTCCGGTAGGCGTGTCTTGTaGATGTGCATCCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SFLHNSVLILSRLTLRHSGRRVL*MCILFS
Trigger: GGAGAAAAGGATGCACATTCACAAGACACGCCTACC...GGAGTGCCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATTGTGTAAAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567951.5
CDS-3UTR GCA 90 bp GTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCCATGGTTTTAGAATCTaGTTCCGGACAGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: VFWVIWRLVIICLHLGSIHGFRI*FRTEPL
Trigger: AAGAGGTTCTGTCCGGAAGCAGATTCTAAAACCATG...GATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp AAAGACATAACCCCATTGCCCAAATCAAGCCTGGAGGAGATGCGTTACTATATACACACTGCTCTCTTGTaGAGCCACTGTGATCTCATG +
Preference number: 4 (lower is better)
Translates to: KDITPLPKSSLEEMRYYIHTALL*SHCDLM
Trigger: CATGAGATCACAGTGGCTGCACAAGAGAGCAGTGTG...TATATAGTAACGCATCTCCTCCAGGCTTGATTTGGGCAATGGGGTTATGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAGGTTTGGGAACACTGTaGTGGGGGAAGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTGLGTL*WGKLPR
Trigger: CCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACC...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACAAGCCTGGAGGAGATaGGTTACTATATACATTTTT +
Preference number: 4 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSQAWRR*VTIYIF
Trigger: AAAAATGTATATAGTAACGCATCTCCTCCAGGCTTG...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGATTTGCAAACCTCTCTaGCCACAGATTCAAATTTGG +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMICKPL*PQIQIW
Trigger: CCAAATTTGAATCTGTGGCCAGAGAGGTTTGCAAAT...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGTGTTTGCAGGCTGTCTaGATTACAGATTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRCLQAV*ITDSQA
Trigger: AGCTTGTGAATCTGTAATCCAGACAGCCTGCAAACA...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGTCTCATTCCAACCGTaGGTGTGGCAAAGACGAGAA +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSVSFQP*VWQRRE
Trigger: TTCTCGTCTTTGCCACACCCACGGTTGGAATGAGAC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAAGACATAACCCCATTGCCCAAATCAAGCCTGGAGGAGATGCGTTACTATATAACATCCATGGCACGCTaGTGTAGGATCCTTTGGACT +
Preference number: 4 (lower is better)
Translates to: KDITPLPKSSLEEMRYYITSMAR*CRILWT
Trigger: AGTCCAAAGGATCCTACACCAGCGTGCCATGGATGT...TATATAGTAACGCATCTCCTCCAGGCTTGATTTGGGCAATGGGGTTATGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGTCGTTCATGTCCTTCTaGTGTTTGTTCTGTATCAGA +
Preference number: 4 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMSFMSF*CLFCIR
Trigger: TCTGATACAGAACAAACACCAGAAGGACATGAACGA...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCAGCTTAAATACTTTTTaGTGGCAGCGGGTGCTTAGC +
Preference number: 4 (lower is better)
Translates to: VTPMAHFSFMSFWCLFCISLNTF*WQRVLS
Trigger: GCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCT...GATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCATCTGAAGACAGGCGCTaGTCAGCATATCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSSEDRR*SAYLSF
Trigger: GAAGCTGAGATATGCTGACCAGCGCCTGTCTTCAGA...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTACAAAGGAGCTTGTCTaGGAAGTTTGTCTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPTKELV*EVCLEC
Trigger: ACACTCCAGACAAACTTCCCAGACAAGCTCCTTTGT...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTTACTTCTATTACTGTTaGTGGGCTACACATCAGGAG +
Preference number: 4 (lower is better)
Translates to: QPKACSVFKSIPAHSTLAYFYYC*WATHQE
Trigger: CTCCTGATGTGTAGCCCACCAACAGTAATAGAAGTA...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAAAAATTATCCAGGCATaGTGGTGCATGCCCGTAATC +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQKIIQA*WCMPVI
Trigger: GATTACGGGCATGCACCACCATGCCTGGATAATTTT...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCATGTCAACTCTACATTaGAGGAGGCAAAACACAATC +
Preference number: 4 (lower is better)
Translates to: TLEEAKHNLEALSELSPGMSTLH*RRQNTI
Trigger: GATTGTGTTTTGCCTCCTCCAATGTAGAGTTGACAT...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACAGACACGAGTGGAGGCTaGATGGGACAACGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTDTSGG*MGQRSG
Trigger: TCCACTGCGTTGTCCCATCCAGCCTCCACTCGTGTC...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CAA 72 bp CATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTaGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: HLWEKLHCEQFV*FLIVCPDSSPS
Trigger: TGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTTCTCCCACAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAACTGATTCTAACTCAGTaGGGTTGCCAACTATATCTC +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQLILTQ*GCQLYL
Trigger: GAGATATAGTTGGCAACCTCACTGAGTTAGAATCAG...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGTTAGTCAGGATACCGTaGCAGAATTTAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQLVRIP*QNLGMS
Trigger: TGACATTCCTAAATTCTGTCACGGTATCCTGACTAA...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp GTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCGTCAACAAAGATGTCTaGTTTGCTTTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VFWVIWRLVIICLHLGSIVNKDV*FAFLQH
Trigger: ATGCTGAAGGAAAGCAAAGCAGACATCTTTGTTGAC...GATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGATGGCCAAGAATATTaGTTCTATAAAGCCCATATT +
Preference number: 4 (lower is better)
Translates to: HQESRHRPESIIHSHPQKDGQEY*FYKAHI
Trigger: AATATGGGCTTTATAGAAGCAATATTCTTGGCCATC...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACAATGCCTACTAGAGTaGGTACACGCAGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSQCLLE*VHAANG
Trigger: TCCATTTGCTGCGTGTACCCACTCTAGTAGGCATTG...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGTCAAGAGCCAGTCATTaGAAAATGCTCCAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQSRASH*KMLQVR
Trigger: TCTTACTTGGAGCATTTTCCAATGACTGGCTCTTGA...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACACCTATACATGTGTCCTaGTGGAGCAGAGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTPIHVS*WSRGSG
Trigger: CCCGCTCCCTCTGCTCCACCAGGACACATGTATAGG...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACAAAATACCCATGGCTGTaGGGCTGTGACCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTKYPWL*GCDQQW
Trigger: CCACTGCTGGTCACAGCCCCACAGCCATGGGTATTT...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAACTCAGTGCAGATGGATaGACTGTTCAACTTCACAAA +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQLSADG*TVQLHK
Trigger: TTTGTGAAGTTGAACAGTCCATCCATCTGCACTGAG...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
3UTR CAA 72 bp AGAGTCCATCATCCACTCACATCCACAGAAGGGTCATaGTTTCTTTTCTTGACCATTTCTCAGCCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: RVHHPLTSTEGS*FLFLTISQPVD
Trigger: GTCAACTGGCTGAGAAATGGTCAAGAAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTTGGCCAATGAATAACTaGCTTTATAATCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPWPMNN*LYNPGQ
Trigger: TTGCCCAGGATTATAAAGTCAGTTATTCATTGGCCA...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACATCATCCAGATGGTCCTaGAGGCACTCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTSSRWS*RHSSSC
Trigger: ACAGGAGCTGGAGTGCCTTCAGGACCATCTGGATGA...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAATTAGTCAGGATACCGTaGCAGAATTTAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQLVRIP*QNLGMS
Trigger: TGACATTCCTAAATTCTGTCACGGTATCCTGACTAA...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACACTGTCACCACCAGCCTaGGCAGACAGTCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTLSPPA*ADSPIF
Trigger: AAAGATGGGACTGTCTGCTCAGGCTGGTGGTGACAG...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTTTTATTTGGTTGGTGTCACTTCTaGGAAGAGCGAGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RLVIICLHLGSINSLFLFGWCHF*EERGEW
Trigger: CCACTCACCTCGCTCTTCTCAGAAGTGACACCAACC...AAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAAAGGTCAGGCTGGACTaGCTGTCACATCCTGAGACC +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTKVRLD*LSHPET
Trigger: GGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTT...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCTTGTTCTTAATAGTTTaGCCAGACAGCTCACCTTCA +
Preference number: 4 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFLFLIV*PDSSPS
Trigger: TGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAA...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTCACAGCACCAGATGCTaGATTTTACAAAACCACTTA +
Preference number: 4 (lower is better)
Translates to: STLEEAKHNLEALSELSPHSTRC*ILQNHL
Trigger: TAAGTGGTTTTGTAAAATGCAGCATCTGGTGCTGTG...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTTCAAGAGCCAGTCATTaGAAAATGCTCCAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLSRASH*KMLQVR
Trigger: TCTTACTTGGAGCATTTTCCAATGACTGGCTCTTGA...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAACTGATTCTAACTCAGTaGGGTTGCCAACTATATCTC +
Preference number: 4 (lower is better)
Translates to: FFQTFDNLSVAILHSGTELILTQ*GCQLYL
Trigger: GAGATATAGTTGGCAACCTCACTGAGTTAGAATCAG...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR TCA 90 bp AAAGACATAACCCCATTGCCCAAATCAAGCCTGGAGGAGATGCGTTACTATATATTCCAGAAGCCACACTaGCATAAGAACAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: KDITPLPKSSLEEMRYYIFQKPH*HKNRIF
Trigger: GAAGATTCTGTTCTTATGTCAGTGTGGCTTCTGGAA...TATATAGTAACGCATCTCCTCCAGGCTTGATTTGGGCAATGGGGTTATGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR TCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACACTGAGAAGAGCGAGGTaGGTGGGGATGCTATACAAG +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTLRRAR*VGMLYK
Trigger: CTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAG...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACACTGAGGCAGGAGAACTaGTTGAACCTAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTLRQEN*LNLGGR
Trigger: TCTGCCTCCTAGGTTCAAGCAGTTCTCCTGCCTCAG...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp GTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGAGGCTTTTCTTAACATaGGGTTTAAGCGGTAATCTG +
Preference number: 4 (lower is better)
Translates to: VIWRLVIICLHLGSINSLRLFLT*GLSGNL
Trigger: CAGATTACCGCTTAAACCCCATGTTAAGAAAAGCCT...CAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGAATGTAGTTCTTAGATaGAGACGTCATTACTTGCAT +
Preference number: 4 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRNVVLR*RRHYLH
Trigger: ATGCAAGTAATGACGTCTCCATCTAAGAACTACATT...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACAAATGACCTCACCAGATaGCTTTGGGGAGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTNDLTR*LWGALH
Trigger: GTGAAGAGCTCCCCAAAGCCATCTGGTGAGGTCATT...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACAGTTTTCCGGATGGACTaGTTTGGGAACACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTVFRMD*FGNTVL
Trigger: CAGCACAGTGTTCCCAAACCAGTCCATCCGGAAAAC...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAGAAGAGCGAGGTGAGTaGGGATGCTATACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTEERGE*GCYTRG
Trigger: CCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR GCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACATCAAAGCTCGATCAATaGGGTAATCTGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTSKLDQ*GNLHQG
Trigger: ACCCTGGTGCAGATTACCGCATTGATCGAGCTTTGA...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGTCAACAAAGATGTCTaGTTTGCTTTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSVNKDV*FAFLQH
Trigger: ATGCTGAAGGAAAGCAAAGCAGACATCTTTGTTGAC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAGCCACTGTGATCTCATaGCCCAAACTCAACCAAAGG +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTATVIS*PKLNQR
Trigger: CCTTTGGTTGAGTTTGGGGCATGAGATCACAGTGGC...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACACTGTGGCGCACACTATaGATAAGTCACAGGGACACT +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTLWRTL*ISHRDT
Trigger: AGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAG...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAGTCTCATTCCAACCGTaGGTGTGGCAAAGACGAGAA +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTVSFQP*VWQRRE
Trigger: TTCTCGTCTTTGCCACACCCACGGTTGGAATGAGAC...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TCCTTTTTACACAATTCTGTTTTGATCTTGAGCAGGTTGACCTTGAGGCACTCCATAATGATTCGGATCTaGTCTTCACAGTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SFLHNSVLILSRLTLRHSIMIRI*SSQSED
Trigger: GTCTTCAGACTGTGAAGACCAGATCCGAATCATTAT...GGAGTGCCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATTGTGTAAAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CCA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAAATGTAGTTCTTAGATaGAGACGTCATTACTTGCAT +
Preference number: 4 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQNVVLR*RRHYLH
Trigger: ATGCAAGTAATGACGTCTCCATCTAAGAACTACATT...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTTTTATTTAATCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCA +
Preference number: 4 (lower is better)
Translates to: RLVIICLHLGSINSLFLFNLCSG*SGAWLS
Trigger: TGATAACCAAGCGCCAGATCACCCAGAACACAGATT...AAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACAAGTCTTCCATCAACATaGGTCGGTAATCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTSLPST*VGNPAS
Trigger: AGATGCTGGATTACCGACGCATGTTGATGGAAGACT...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACACCTAGCTTTGAAGGATaGACTAACACAGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTPSFEG*TNTELQ
Trigger: CTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGG...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR TCA 90 bp CGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTTTTATTTCGGAACAGAAGTTTTTaGTGTCACTCTTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RLVIICLHLGSINSLFLFRNRSF*CHSCRL
Trigger: AAGCCTGCAAGAGTGACATCAAAAACTTCTGTTCCG...AAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR GCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAGGAGACGTCATTACTTaGATGGCAAGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTGDVIT*MARSEK
Trigger: CTTCTCTGATCTTGCCATGCAAGTAATGACGTCTCC...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR GCA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAGATGGCCAAGAATATTaGTTCTATAAAGCCCATATT +
Preference number: 4 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSDGQEY*FYKAHI
Trigger: AATATGGGCTTTATAGAAGCAATATTCTTGGCCATC...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACACAGTTCAGACTTTGCTaGCCTTGGCACTTAGAAAAA +
Preference number: 4 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTQFRLC*PWHLEK
Trigger: TTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTG...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CCA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACACCTAAAGATTCGGTCTaGTTTGCTAATGACTTATCT +
Preference number: 4 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTPKDSV*FANDLS
Trigger: AGATAAGTCATTAGCAAACCAGACCGAATCTTTAGG...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS CCA 90 bp CCGCCGGGCCGCCGCCTCCGGCCTGCCCTACGAAGGACACAAAGTTaGCCCCGGGACCCTGGCCCTGGCTGTGGACGCCCTGGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: PPGRRLRPALRRTQS*PRDPGPGCGRPGRG
Trigger: TCCCCGGCCAGGGCGTCCACAGCCAGGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCGTAGGGCAGGCCGGAGGCGGCGGCCCGGCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567951.5
ENST00000627032.2
CDS-3UTR CAA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGCGTCTCCCTGGCACTaGCGGTACAGGACAGGGTCC +
Preference number: 5 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLASPWH*RYRTGS
Trigger: GGACCCTGTCCTGTACCGCAAGTGCCAGGGAGACGC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGCATGAGACAGGACATTaGACGCCCGCGGCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLHETGH*TPAARG
Trigger: ACCCCTGGCCGCGGGCGTCAAATGTCCTGTCTCATG...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS GCA 90 bp TGGCCGGGGAGTTTCTCGGCCCCGGCCGCGAATAGCAGCAGCAGATaGAGCGCCGCCGACAAGCGGAACATCCTCCGTACACGTCCACAC +
Preference number: 5 (lower is better)
Translates to: WPGSFSAPAANSSSR*SAADKRNILRTRPH
Trigger: GTGTGGACGTGTACGGAGGATGTTCCGCTTGTCGGCGGCGCTGCATCTGCTGCTGCTATTCGCGGCCGGGGCCGAGAAACTCCCCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000565260.1
ENST00000567951.5
ENST00000627032.2
CDS TCA 90 bp CCGACAAGCGGAACATCCTCCGTACACGTCCACACGCCGCCATCTTaGGTCCGCGGCGAGCTCGACGCACTCGCCGGCGCCGCGTATTTA +
Preference number: 5 (lower is better)
Translates to: PTSGTSSVHVHTPPS*VRGELDALAGAAYL
Trigger: TAAATACGCGGCGCCGGCGAGTGCGTCGAGCTCGCCGCGGACTCAAGATGGCGGCGTGTGGACGTGTACGGAGGATGTTCCGCTTGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627032.2
CDS-3UTR CAA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGGCTTCCCTTGGTGACTaGGCAGGGGGACAATCAGTT +
Preference number: 5 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLASLGD*AGGQSV
Trigger: AACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAGC...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS GCA 90 bp ACATCCTGCAGGCACTCGAGCACCGCCAGGTTGTTGCTCCAGGTGTaGTTAGGGCACACGCGGGTCACGTCCTCCCTGCAGGACTCTTCC +
Preference number: 5 (lower is better)
Translates to: TSCRHSSTARLLLQV*LGHTRVTSSLQDSS
Trigger: GGAAGAGTCCTGCAGGGAGGACGTGACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000565260.1
ENST00000567951.5
ENST00000627032.2
CDS-3UTR CAA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCGCGTCTCCCTGGCACTaGCGGTACAGGACAGGGTCC +
Preference number: 5 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSASPWH*RYRTGS
Trigger: GGACCCTGTCCTGTACCGCAAGTGCCAGGGAGACGC...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCATCCTGCAGAGTGTCATaGCGCACGGTCGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSASCRVS*RTVVLR
Trigger: CCTGAGCACGACCGTGCGCAATGACACTCTGCAGGA...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCCATGAGACAGGACATTaGACGCCCGCGGCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: GFLQSVIAHGRAQADHHVHETGH*TPAARG
Trigger: ACCCCTGGCCGCGGGCGTCAAATGTCCTGTCTCATG...GACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS GCA 90 bp TGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCCACCCTaGAGACGAAAGAAGCTTGAGGCTGGCTGGGGCCACACAAGGGCA +
Preference number: 5 (lower is better)
Translates to: CHCARSCSGRSPRPP*RRKKLEAGWGHTRA
Trigger: TGCCCTTGTGTGGCCCCAGCCAGCCTCAAGCTTCTTTCGTCTGCAGGGTGGACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS-3UTR CAA 90 bp GGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCAGGGCAGGATCCAGCTaGACATCCATGGCACGCTGG +
Preference number: 5 (lower is better)
Translates to: GFLQSVIAHGRAQADHHVRAGSS*TSMARW
Trigger: CCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCT...GACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATTCCTGCAGAGTGTCATaGCGCACGGTCGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHSCRVS*RTVVLR
Trigger: CCTGAGCACGACCGTGCGCAATGACACTCTGCAGGA...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCGCCGAGGGCAGGCCTaGGTCTACATGGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPRRGQA*VYMDSF
Trigger: AAAACTGTCCATGTAGACCAAGGCCTGCCCTCGGCG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCCTGAAGCCTTAGCCTaGGCAAAACCCCCTACCCTC +
Preference number: 5 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPPEALA*AKPPTL
Trigger: GAGGGTAGGGGGTTTTGCCAAGGCTAAGGCTTCAGG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS GCA 90 bp ATGCGGGAGGCCTCCAGGGCTAACCCCACGAGGCAGCAGGAGGGCTaGCTAACATCTCGCATACTCATTCCGGAGCTAAGAGGAACTTCG +
Preference number: 5 (lower is better)
Translates to: MREASRANPTRQQEG*LTSRILIPELRGTS
Trigger: CGAAGTTCCTCTTAGCTCCGGAATGAGTATGCGAGATGTTAGGCAGCCCTCCTGCTGCCTCGTGGGGTTAGCCCTGGAGGCCTCCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CCA 90 bp GTCTCATTCCAACCGTGGGTGTGGCAAAGACGAGAAGCGTCTCCCTaGCACTTGCGGTACAGGACAGGGTCCAGCTTCCAATCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: VSFQPWVWQRREASP*HLRYRTGSSFQSRE
Trigger: CTCCCGGGATTGGAAGCTGGACCCTGTCCTGTACCGCAAGTGCCAGGGAGACGCTTCTCGTCTTTGCCACACCCACGGTTGGAATGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS-3UTR CAA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTACGAAGGACACAAAGTaGGCCCCGGGACCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSTKDTK*APGPWP
Trigger: GGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCGT...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACAACGAAGGACACAAAGTaGGCCCCGGGACCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTTKDTK*APGPWP
Trigger: GGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCGT...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CAA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACACGAAGGACACAAAGTaGGCCCCGGGACCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNTKDTK*APGPWP
Trigger: GGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCGT...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGGCGTCTCCCTGGCACTaGCGGTACAGGACAGGGTCC +
Preference number: 5 (lower is better)
Translates to: EWRLDGTTQWTSANALTRASPWH*RYRTGS
Trigger: GGACCCTGTCCTGTACCGCAAGTGCCAGGGAGACGC...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422840.7
ENST00000562090.5
CDS-3UTR CAA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATTCCTGCAGAGTGTCATaGCGCACGGTCGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADSCRVS*RTVVLR
Trigger: CCTGAGCACGACCGTGCGCAATGACACTCTGCAGGA...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GAGACTCTCGGGCCGCTCACTCCGGCTGGCAGTGGCGGGAGGCAGTGTGTGCTGTGGAGACGTCATTACTaGCATGGCAAGATCAGAGAA +
Preference number: 5 (lower is better)
Translates to: ETLGPLTPAGSGGRQCVLWRRHY*HGKIRE
Trigger: TTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCA...CAGCACACACTGCCTCCCGCCACTGCCAGCCGGAGTGAGCGGCCCGAGAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS GCA 90 bp CCCTGTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTaGTCAGGCAGATCACCACGTCCACCCTGCAGACGAAAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: PCAPWLPAECHCARS*SGRSPRPPCRRKKL
Trigger: AAGCTTCTTTCGTCTGCAGGGTGGACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CCA 90 bp GCAGGATCCAGCTTGACATCCATGGCACGCTGGTGTAGGATCCTTTaGACTTCAGCTCGGCACTCCCGTGAGAGCCTCCTTCCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: AGSSLTSMARWCRIL*TSARHSRESLLPCS
Trigger: GGAACAGGGAAGGAGGCTCTCACGGGAGTGCCGAGCTGAAGTCCAAAGGATCCTACACCAGCGTGCCATGGATGTCAAGCTGGATCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567951.5
ENST00000627032.2
CDS-3UTR CAA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTACGAAGGACACAAAGTaGGCCCCGGGACCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTTKDTK*APGPWP
Trigger: GGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCGT...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGCTCCTGAATCAGTGTTaGAAGCGCCTGCTGGCAGTT +
Preference number: 5 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPLLNQC*KRLLAV
Trigger: AACTGCCAGCAGGCGCTTCAAACACTGATTCAGGAG...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACCATGAGACAGGACATTaGACGCCCGCGGCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNHETGH*TPAARG
Trigger: ACCCCTGGCCGCGGGCGTCAAATGTCCTGTCTCATG...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGTGCAGGTCAGGTGAGTaGGTTCTGGAAGTACCGGAA +
Preference number: 5 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPCRSGE*VLEVPE
Trigger: TTCCGGTACTTCCAGAACCAACTCACCTGACCTGCA...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS CCA 90 bp CACTTATCCTGGAGGGCAGGATCCAGCTTGACATCCATGGCACGCTaGTGTAGGATCCTTTGGACTTCAGCTCGGCACTCCCGTGAGAGC +
Preference number: 5 (lower is better)
Translates to: HLSWRAGSSLTSMAR*CRILWTSARHSRES
Trigger: GCTCTCACGGGAGTGCCGAGCTGAAGTCCAAAGGATCCTACACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCTCCAGGATAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567951.5
ENST00000627032.2
CDS-3UTR CAA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCACTGGGCAATCAGCTTTaGGCGGGTTGTAAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPLGNQL*AGCKCF
Trigger: GAAGCACTTACAACCCGCCAAAAGCTGATTGCCCAG...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACAGGGCAGGATCCAGCTaGACATCCATGGCACGCTGG +
Preference number: 5 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNRAGSS*TSMARW
Trigger: CCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCT...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGGAACAGAATCTTCTCTaGGGAAGGCCAAGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPEQNLL*GRPREV
Trigger: GACTTCCCTTGGCCTTCCCAAGAGAAGATTCTGTTC...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGCACTCACTGCTGACTaGTCGCCCTCTGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLALTAD*SPSVYS
Trigger: GCTGTACACAGAGGGCGACAAGTCAGCAGTGAGTGC...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CAA 90 bp GTGCTCCTTGGCTTCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCTCCTGAATCAGTGTTaGAAGCGCCTGCTGGCAGTT +
Preference number: 5 (lower is better)
Translates to: VLLGFLQSVIAHGRAQADLLNQC*KRLLAV
Trigger: AACTGCCAGCAGGCGCTTCAAACACTGATTCAGGAG...ATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGAAGCCAAGGAGCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CAA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAGCGGAACAGAAGTTTTaGATGTCACTCTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSAAEQKF*MSLLQA
Trigger: AGCCTGCAAGAGTGACATCAAAAACTTCTGTTCCGC...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATCTGAGCGTTGCCATATaGCACAGCGGAACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHLSVAI*HSGTEV
Trigger: AACTTCTGTTCCGCTGTGCAATATGGCAACGCTCAG...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AGAGGAGGCGAGTGGGGAGGAAGGAAGTGTCCCTCAAGGCCTGAGAGAGACCCACATCCCAGACAGCTGTaGACAATCAGGAAGACCCTA +
Preference number: 5 (lower is better)
Translates to: RGGEWGGRKCPSRPERDPHPRQL*TIRKTL
Trigger: TAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATG...TGGGTCTCTCTCAGGCCTTGAGGGACACTTCCTTCCTCCCCACTCGCCTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCTCCGGATGGACTGGTTaGGGAACACTGTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTSGWTG*GTLCWG
Trigger: CCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGA...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCTCCGGATGGACTGGTTaGGGAACACTGTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SPSFEGCTNTELQLGVVASGWTG*GTLCWG
Trigger: CCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGA...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTTGGCTCTACCTGTCCTaGAGCTCTCGTGTCACTCGC +
Preference number: 5 (lower is better)
Translates to: GLTELPICGRSSIVNSSSWLYLS*SSRVTR
Trigger: GCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCA...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CAA 90 bp GGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCAGTGCAGCTTGGCTCTACCTGTCCTaGAGCTCTCGTGTCACTCGC +
Preference number: 5 (lower is better)
Translates to: GLLLLQHIDWRSRLSSAAWLYLS*SSRVTR
Trigger: GCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCA...AGCTGCACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGCTTA +
Preference number: 5 (lower is better)
Translates to: SPSFEGCTNTELQLGVVASSTAR*LLQVCL
Trigger: TAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGA...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp ACCAGCTGGAAGTGGGTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGCTTA +
Preference number: 5 (lower is better)
Translates to: TSWKWVTPMAHFSFMSFWSSTAR*LLQVCL
Trigger: TAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGA...CCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTACCCACTTCCAGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCTCCTGCAGAGTGTCATaGCGCACGGTCGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSSCRVS*RTVVLR
Trigger: CCTGAGCACGACCGTGCGCAATGACACTCTGCAGGA...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATGCGGAACAGAAGTTTTaGATGTCACTCTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHAEQKF*MSLLQA
Trigger: AGCCTGCAAGAGTGACATCAAAAACTTCTGTTCCGC...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCCTGCAGAGTGTCATTGCGCACGGTCGTGCTCAGGCAGATCACCACGTCCACCGCGGAACAGAAGTTTTaGATGTCACTCTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: SCRVSLRTVVLRQITTSTAEQKF*MSLLQA
Trigger: AGCCTGCAAGAGTGACATCAAAAACTTCTGTTCCGC...GGTGGACGTGGTGATCTGCCTGAGCACGACCGTGCGCAATGACACTCTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCCATGAGACAGGACATTaGACGCCCGCGGCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: LHTGGMRRDGQEYCFYKAHETGH*TPAARG
Trigger: ACCCCTGGCCGCGGGCGTCAAATGTCCTGTCTCATG...GGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp ACCAGCTGGAAGTGGGTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGCTGCTGGGGCCACCTTaGCTGCGTAACTCCACATCT +
Preference number: 5 (lower is better)
Translates to: TSWKWVTPMAHFSFMSFWLLGPP*LRNSTS
Trigger: AGATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAG...CCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTACCCACTTCCAGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GCGGTAGTCCAGGGCGGACTCCTGGATAATGATTCGGATCTGGTCTTCACAGTCTCTCGTGTCACTCGCTaGGTGATCCGTCCACACATC +
Preference number: 5 (lower is better)
Translates to: AVVQGGLLDNDSDLVFTVSRVTR*VIRPHI
Trigger: GATGTGTGGACGGATCACCAAGCGAGTGACACGAGA...GACTGTGAAGACCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGACTACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTGCTTCCCTTGGTGACTaGGCAGGGGGACAATCAGTT +
Preference number: 5 (lower is better)
Translates to: GLTELPICGRSSIVNSSSASLGD*AGGQSV
Trigger: AACTGATTGTCCCCCTGCCAAGTCACCAAGGGAAGC...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAAGGCAGGACAATCGCTaGAACCAGGGAGTCGGAGGA +
Preference number: 5 (lower is better)
Translates to: FTHTGKETAERKDTPPGQRQDNR*NQGVGG
Trigger: TCCTCCGACTCCCTGGTTCAAGCGATTGTCCTGCCT...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCCCGAAGTGGGCCACTTaGCGGCCACTTTGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: TLEEAKHNLEALSELSPGPKWAT*RPLWKA
Trigger: GGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGG...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCAGGCCGAAGTGCACTTaGGCCGAAGTGGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTRPKCT*AEVGHF
Trigger: AAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCCT...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS GCA 90 bp TCTCCAGTGGAAACTTCTCTGAGCAGCTCTGTGCGTAACCAGTTTTaGACGCAAATCCCACCTCGTCTGAGCAGTGCAGCTGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SPVETSLSSSVRNQF*TQIPPRLSSAAGAE
Trigger: CTCAGCTCCAGCTGCACTGCTCAGACGAGGTGGGATTTGCGTGCAAAACTGGTTACGCACAGAGCTGCTCAGAGAAGTTTCCACTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561481.1
ENST00000563646.1
CDS-3UTR CAA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGCTTA +
Preference number: 5 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWSSTAR*LLQVCL
Trigger: TAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGAAGTGGGCACATCATTCTGCCCTCACCAGCTaGTGTATTTTCACAAAAACG +
Preference number: 5 (lower is better)
Translates to: GRSGPLCGHFGRPKWAHHSALTS*CIFTKT
Trigger: CGTTTTTGTGAAAATACACAAGCTGGTGAGGGCAGA...ATGATGTGCCCACTTCGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCAGTGCAGCTCTGGGCAATCAGCTTTaGGCGGGTTGTAAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GLLLLQHIDWRSRLSSAALGNQL*AGCKCF
Trigger: GAAGCACTTACAACCCGCCAAAAGCTGATTGCCCAG...AGCTGCACTGCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CAA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAGCACTCACTGCTGACTaGTCGCCCTCTGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSALTAD*SPSVYS
Trigger: GCTGTACACAGAGGGCGACAAGTCAGCAGTGAGTGC...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTCTCCTGAATCAGTGTTaGAAGCGCCTGCTGGCAGTT +
Preference number: 5 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSLLNQC*KRLLAV
Trigger: AACTGCCAGCAGGCGCTTCAAACACTGATTCAGGAG...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GCGGTAGTCCAGGGCGGACTCCTGGATAATGATTCGGATCTGGTCTTCACAGTCTTGATCTTGAGCAGGTaGACCTTGAGGCACTCCTCC +
Preference number: 5 (lower is better)
Translates to: AVVQGGLLDNDSDLVFTVLILSR*TLRHSS
Trigger: GGAGGAGTGCCTCAAGGTCAACCTGCTCAAGATCAA...GACTGTGAAGACCAGATCCGAATCATTATCCAGGAGTCCGCCCTGGACTACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGATCTCAATCCGGTCATaGAGGCGCTTTTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVISIRS*RRFLHS
Trigger: CGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGAT...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAATCTCGTGTCACTCGCTaGGTGATCCGTCCACACATC +
Preference number: 5 (lower is better)
Translates to: FTHTGKETAERKDTPPGQSRVTR*VIRPHI
Trigger: GATGTGTGGACGGATCACCAAGCGAGTGACACGAGA...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTTATTGTAGCCTGTCCTaGAGCTCTCGTGTCACTCGC +
Preference number: 5 (lower is better)
Translates to: GLTELPICGRSSIVNSSSYCSLS*SSRVTR
Trigger: GCGAGTGACACGAGAGCTCAAGGACAGGCTACAATA...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000205061.9
CDS-3UTR CAA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTGAGGCACAAAGGAGCTaGTCTGGGAAGTTTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GLTELPICGRSSIVNSSSEAQRS*SGKFVW
Trigger: CCAGACAAACTTCCCAGACAAGCTCCTTTGTGCCTC...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAACGGCCAGTTCAGACTTaGCTGGCCTTGGCACTTAGA +
Preference number: 5 (lower is better)
Translates to: FTHTGKETAERKDTPPGQRPVQT*LALALR
Trigger: TCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCG...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCGCCCCAGGCCCTGTTTaGTTTTGCCAAATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTAPGPV*FCQMRD
Trigger: GTCCCTCATTTGGCAAAACAAAACAGGGCCTGGGGC...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCCGAAGTGGGCCACTTaGCGGCCACTTTGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTPKWAT*RPLWKA
Trigger: GGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGG...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS TCA 90 bp TTCCCAGATCAATCAGGCACTTATCCTGGAGGGCAGGATCCAGCTTaGCATCCATGGCACGCTGGTGTAGGATCCTTTGGACTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: FPDQSGTYPGGQDPA*HPWHAGVGSFGLQL
Trigger: GAGCTGAAGTCCAAAGGATCCTACACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCTCCAGGATAAGTGCCTGATTGATCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567911.1
ENST00000567951.5
ENST00000627032.2
CDS CCA 90 bp ACTCCACGGGGCCAGGAGAGCCAAGCCAAGATCTTACCTGTGTTCTaGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCC +
Preference number: 5 (lower is better)
Translates to: TPRGQESQAKILPVF*VIWRLVIICLHLGS
Trigger: GGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGGTAAGATCTTGGCTTGGCTCTCCTGGCCCCGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS-3UTR CAA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTAGCACCGCCAGGTTGTaGCTCCAGGTGTGCTTAGGG +
Preference number: 5 (lower is better)
Translates to: QPKACSVFKSIPAHSTLASTARL*LQVCLG
Trigger: CCCTAAGCACACCTGGAGCAACAACCTGGCGGTGCT...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGGCACTCACTGCTGACTaGTCGCCCTCTGTGTACAGC +
Preference number: 5 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMALTAD*SPSVYS
Trigger: GCTGTACACAGAGGGCGACAAGTCAGCAGTGAGTGC...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGCTGAGCGTTGCCATATaGCACAGCGGAACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: EWRLDGTTQWTSANALTRLSVAI*HSGTEV
Trigger: AACTTCTGTTCCGCTGTGCAATATGGCAACGCTCAG...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTTTGATCTTGAGCAGGTaGACCTTGAGGCACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LPANHTRHVRRHLHVHDILILSR*TLRHSS
Trigger: GGAGGAGTGCCTCAAGGTCAACCTGCTCAAGATCAA...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCCGCCGAGGGCAGGCCTaGGTCTACATGGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: TLEEAKHNLEALSELSPGRRGQA*VYMDSF
Trigger: AAAACTGTCCATGTAGACCAAGGCCTGCCCTCGGCG...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGCCCCAGGCCCTGTTTaGTTTTGCCAAATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: HQESRHRPESIIHSHPQKAPGPV*FCQMRD
Trigger: GTCCCTCATTTGGCAAAACAAAACAGGGCCTGGGGC...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GCCGAAGTGCACTTTGGCCGAAGTGGGCCACTTTGCGGCCACTTTGGAAGGCCGTCCACAGAAGGGTCATaGTTTCTTTTCTTGACCATT +
Preference number: 5 (lower is better)
Translates to: AEVHFGRSGPLCGHFGRPSTEGS*FLFLTI
Trigger: AATGGTCAAGAAAAGAAACAATGACCCTTCTGTGGA...CGGCCTTCCAAAGTGGCCGCAAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCATCCACAGAAGGGTCATaGTTTCTTTTCTTGACCATT +
Preference number: 5 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSASTEGS*FLFLTI
Trigger: AATGGTCAAGAAAAGAAACAATGACCCTTCTGTGGA...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCCCTGAAGCCTTAGCCTaGGCAAAACCCCCTACCCTC +
Preference number: 5 (lower is better)
Translates to: TLEEAKHNLEALSELSPGPEALA*AKPPTL
Trigger: GAGGGTAGGGGGTTTTGCCAAGGCTAAGGCTTCAGG...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCAGGCAGGAGAACTGCTaGAACCTAGGAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTRQENC*NLGGRS
Trigger: ACTTCTGCCTCCTAGGTTCAAGCAGTTCTCCTGCCT...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GTCTCCTGCAGCTTAAATACTTTTTGGTGGCAGCGGGTGCTTAGCTGCTTCTTGTGGCTCTACCTGTCCTaGAGCTCTCGTGTCACTCGC +
Preference number: 5 (lower is better)
Translates to: VSCSLNTFWWQRVLSCFLWLYLS*SSRVTR
Trigger: GCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCA...CAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCATGCAGGTCAGGTGAGTaGGTTCTGGAAGTACCGGAA +
Preference number: 5 (lower is better)
Translates to: QTLHQVPRVYLVICHIVACRSGE*VLEVPE
Trigger: TTCCGGTACTTCCAGAACCAACTCACCTGACCTGCA...TGCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTGCAGGTCAGGTGAGTaGGTTCTGGAAGTACCGGAA +
Preference number: 5 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALCRSGE*VLEVPE
Trigger: TTCCGGTACTTCCAGAACCAACTCACCTGACCTGCA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS TCA 90 bp CACGGGGCCAGGAGAGCCAAGCCAAGATCTTACCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCA +
Preference number: 5 (lower is better)
Translates to: HGARRAKPRSYLCSG*SGAWLSSVCIWDPS
Trigger: TGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGGTAAGATCTTGGCTTGGCTCTCCTGGCCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS TCA 90 bp AAGCTGCAATTTGACTGTGGGTGTCATGAAAGGCAGGCAGCAGCATaGATGCTGACTACATTCCTGACAGAAGGGGAAGCCACACAGGGC +
Preference number: 5 (lower is better)
Translates to: KLQFDCGCHERQAAA*MLTTFLTEGEATQG
Trigger: GCCCTGTGTGGCTTCCCCTTCTGTCAGGAATGTAGTCAGCATTCATGCTGCTGCCTGCCTTTCATGACACCCACAGTCAAATTGCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CCA 90 bp GTTTTCTCACTGCACCATTTTCCCAGATCAATCAGGCACTTATCCTaGAGGGCAGGATCCAGCTTGACATCCATGGCACGCTGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: VFSLHHFPRSIRHLS*RAGSSLTSMARWCR
Trigger: CCTACACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCTCCAGGATAAGTGCCTGATTGATCTGGGAAAATGGTGCAGTGAGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567911.1
ENST00000567951.5
ENST00000627032.2
CDS-3UTR CAA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCTGAGCGTTGCCATATaGCACAGCGGAACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSLSVAI*HSGTEV
Trigger: AACTTCTGTTCCGCTGTGCAATATGGCAACGCTCAG...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TTTCCGGATGGACTGGTTTGGGAACACTGTGCTGGGGGAAGCTGCCCAGGAAGCAATTCTGTTTTGATCTaGAGCAGGTTGACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: FPDGLVWEHCAGGSCPGSNSVLI*SRLTLR
Trigger: CCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATT...GCTTCCTGGGCAGCTTCCCCCAGCACAGTGTTCCCAAACCAGTCCATCCGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTCATTGAGGCGCTTTTaGCACTCGGGCTGTAACCTC +
Preference number: 5 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWSLRRF*HSGCNL
Trigger: GAGGTTACAGCCCGAGTGCAAAAAGCGCCTCAATGA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGCTGCTGGGGCCACCTTaGCTGCGTAACTCCACATCT +
Preference number: 5 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRLLGPP*LRNSTS
Trigger: AGATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAG...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCTCTCGTGTCACTCGCTaGGTGATCCGTCCACACATC +
Preference number: 5 (lower is better)
Translates to: LHTGGMRRDGQEYCFYKASRVTR*VIRPHI
Trigger: GATGTGTGGACGGATCACCAAGCGAGTGACACGAGA...GGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGTAGCCCGGGGAAGATCGCTTTCCCGGGGGTGATCCCAAGCCTATGGAGTGCAAACCTTTATAAGCCATaGTCTCTGACCTGTATTGTA +
Preference number: 5 (lower is better)
Translates to: GSPGKIAFPGVIPSLWSANLYKP*SLTCIV
Trigger: TACAATACAGGTCAGAGACAATGGCTTATAAAGGTT...TGCACTCCATAGGCTTGGGATCACCCCCGGGAAAGCGATCTTCCCCGGGCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAGCTTGTCTGGGAAGTTaGTCTGGAGTGTGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: FTHTGKETAERKDTPPGQACLGS*SGVCRK
Trigger: CTTTCTGCACACTCCAGACAAACTTCCCAGACAAGC...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTCCATCCCAGACAGCTGTaGACAATCAGGAAGACCCTA +
Preference number: 5 (lower is better)
Translates to: YLQTTPGTSVGTSMYMTFHPRQL*TIRKTL
Trigger: TAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATG...GAATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTAGGCCGAAGTGCACTTaGGCCGAAGTGGGCCACTTT +
Preference number: 5 (lower is better)
Translates to: QPKACSVFKSIPAHSTLARPKCT*AEVGHF
Trigger: AAAGTGGCCCACTTCGGCCAAAGTGCACTTCGGCCT...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTTGCTCTAACACGGGGTaGGTGTCACTTCTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTCSNTG*VSLLRR
Trigger: TCTTCTCAGAAGTGACACCAACCCCGTGTTAGAGCA...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTGCTCTAACACGGGGTaGGTGTCACTTCTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALCSNTG*VSLLRR
Trigger: TCTTCTCAGAAGTGACACCAACCCCGTGTTAGAGCA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTCCTCCCCAGCTGCCCTaGTCTAGGAAGGCTCATGCT +
Preference number: 5 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLPPQLP*SRKAHA
Trigger: AGCATGAGCCTTCCTAGACAAGGGCAGCTGGGGAGG...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS TCA 90 bp CGCTCCCGATCATCTCGGCAAGCAAAATATAAATGCCGGTCTAAGTaGAAGTCATCCGATGACAGCTCAGCCACCCGGAGAATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: RSRSSRQAKYKCRSK*KSSDDSSATRRMAF
Trigger: GAAAGCCATTCTCCGGGTGGCTGAGCTGTCATCGGATGACTTTCACTTAGACCGGCATTTATATTTTGCTTGCCGAGATGATCGGGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS TCA 90 bp CAAGCGGATGTCCTCCGTCTGCATGAGGGAGCCAGCATGGAAAGGTaGGCTTGGTTTAGGCTGGAGATGTCATATGTTCTGGAGACTTAT +
Preference number: 5 (lower is better)
Translates to: QADVLRLHEGASMER*AWFRLEMSYVLETY
Trigger: ATAAGTCTCCAGAACATATGACATCTCCAGCCTAAACCAAGCTCACCTTTCCATGCTGGCTCCCTCATGCAGACGGAGGACATCCGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS GCA 90 bp CGGTACAGGACAGGGTCCAGCTTCCAATCCCGGGAGATGAAATACTaGAGCTCTAAGAGACGGTGTTCACAGTCTTCTACCATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: RYRTGSSFQSREMKY*SSKRRCSQSSTIFS
Trigger: AGAGAAGATGGTAGAAGACTGTGAACACCGTCTCTTAGAGCTGCAGTATTTCATCTCCCGGGATTGGAAGCTGGACCCTGTCCTGTACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS GCA 90 bp TCCTTTAGCCTATGGGACCTCCATGTGAGAACTACCATCGCCAGATaGTCTGTCCAGACAGTCCGAGTGTTTGCCACGCTAATCAAAGGA +
Preference number: 5 (lower is better)
Translates to: SFSLWDLHVRTTIAR*SVQTVRVFATLIKG
Trigger: TCCTTTGATTAGCGTGGCAAACACTCGGACTGTCTGGACAGAGCATCTGGCGATGGTAGTTCTCACATGGAGGTCCCATAGGCTAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS-3UTR CAA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGCTGGGCAATCAGCTTTaGGCGGGTTGTAAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMLGNQL*AGCKCF
Trigger: GAAGCACTTACAACCCGCCAAAAGCTGATTGCCCAG...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAAACAGTATGTCCTTCTGGTGTTaGTTCTGTATCAGACACTCC +
Preference number: 5 (lower is better)
Translates to: AYWEGDCREEGYPTRSNSMSFWC*FCIRHS
Trigger: GGAGTGTCTGATACAGAACAAACACCAGAAGGACAT...ACTGTTTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGCTGAGCGTTGCCATATaGCACAGCGGAACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: HQESRHRPESIIHSHPQKLSVAI*HSGTEV
Trigger: AACTTCTGTTCCGCTGTGCAATATGGCAACGCTCAG...CTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGGATAGGTAGTTCCCTCTTTATCATCTGCTaGCAGACCCTCATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: VGMLYKRAVQTGHWIGSSLFIIC*QTLMRV
Trigger: CACCCTCATGAGGGTCTGCAAGCAGATGATAAAGAG...GGAACTACCTATCCAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGTGGGTGATCTGGCGCTaGGTTATCATCTGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALWVIWR*VIICLH
Trigger: ATGCAAACAGATGATAACCAAGCGCCAGATCACCCA...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp ACCTCTAGAGGGCTGTGGCGCACACTATGCATAAGTCACAGGGACACTGGCATGAATTCTGAATCATCCTaGGCCTTAGTCAGGATACCG +
Preference number: 5 (lower is better)
Translates to: TSRGLWRTLCISHRDTGMNSESS*ALVRIP
Trigger: CGGTATCCTGACTAAGGCCAAGGATGATTCAGAATT...CATGCCAGTGTCCCTGTGACTTATGCATAGTGTGCGCCACAGCCCTCTAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CTTTGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGAATTCTGAATCATCCTaGGCCTTAGTCAGGATACCG +
Preference number: 5 (lower is better)
Translates to: LWWSRWLYLSLSSRVTRLNSESS*ALVRIP
Trigger: CGGTATCCTGACTAAGGCCAAGGATGATTCAGAATT...CAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCCTGCTGGGGCCACCTTaGCTGCGTAACTCCACATCT +
Preference number: 5 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFLLGPP*LRNSTS
Trigger: AGATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAG...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCAGACTTTGCTGGCCTaGGCACTTAGAAAAACTTGC +
Preference number: 5 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTQTLLA*ALRKTC
Trigger: GCAAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTG...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCAAAGACATAACCCCATaGCCCAAATCAAGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SPSFEGCTNTELQLGVVAKDITP*PKSSLE
Trigger: CTCCAGGCTTGATTTGGGCAATGGGGTTATGTCTTT...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CAA 90 bp CTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTCCGCCACAGATTCAAATTaGGGATCTGTAGTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: LLQASYRSGSKRMSSVISATDSN*GSVVRF
Trigger: GAACCTAACTACAGATCCCAAATTTGAATCTGTGGC...GGAGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCGTGGCTCTGCCCTCACCAGCTaGTGTATTTTCACAAAAACG +
Preference number: 5 (lower is better)
Translates to: SDTPSGPQSLSGYLPHRGSALTS*CIFTKT
Trigger: CGTTTTTGTGAAAATACACAAGCTGGTGAGGGCAGA...GCCACGATGTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS-3UTR CAA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTATGTCCTTCTGGTGTTaGTTCTGTATCAGACACTCC +
Preference number: 5 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTMSFWC*FCIRHS
Trigger: GGAGTGTCTGATACAGAACAAACACCAGAAGGACAT...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTATGTCCTTCTGGTGTTaGTTCTGTATCAGACACTCC +
Preference number: 5 (lower is better)
Translates to: LHGKIREAICWGHLCCVTMSFWC*FCIRHS
Trigger: GGAGTGTCTGATACAGAACAAACACCAGAAGGACAT...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGGTGCTTAGCTGCTTCTaGTTTTCTTTCAGACATTCG +
Preference number: 5 (lower is better)
Translates to: EWRLDGTTQWTSANALTRVLSCF*FSFRHS
Trigger: CGAATGTCTGAAAGAAAACAAGAAGCAGCTAAGCAC...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCCTCTTTATCATCTGCTaGCAGACCCTCATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TLEEAKHNLEALSELSPGLFIIC*QTLMRV
Trigger: CACCCTCATGAGGGTCTGCAAGCAGATGATAAAGAG...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGAATTCTGAATCATCCTaGGCCTTAGTCAGGATACCG +
Preference number: 5 (lower is better)
Translates to: KSEVSGDAIQEGCTNWALNSESS*ALVRIP
Trigger: CGGTATCCTGACTAAGGCCAAGGATGATTCAGAATT...CAGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACAATTCTGTTTTGATCTaGAGCAGGTTGACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LAWQDQRSHLLGPPLLRNNSVLI*SRLTLR
Trigger: CCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATT...GTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCTCATTGAGGCGCTTTTaGCACTCGGGCTGTAACCTC +
Preference number: 5 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTSLRRF*HSGCNL
Trigger: GAGGTTACAGCCCGAGTGCAAAAAGCGCCTCAATGA...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACATCTCAATCCGGTCATaGAGGCGCTTTTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHISIRS*RRFLHS
Trigger: CGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGAT...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTTGGAGACGTCATTACTaGCATGGCAAGATCAGAGAA +
Preference number: 5 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIWRRHY*HGKIRE
Trigger: TTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCA...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCAGACACTCTCTCGTGTCACTCGCTaGGTGATCCGTCCACACATC +
Preference number: 5 (lower is better)
Translates to: DGTLLVHVLLVFVLYQTLSRVTR*VIRPHI
Trigger: GATGTGTGGACGGATCACCAAGCGAGTGACACGAGA...GAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCTTCTTGCTAACGGGCTaGTCTAGGGACAACAGCAAC +
Preference number: 5 (lower is better)
Translates to: TLEEAKHNLEALSELSPGFLLTG*SRDNSN
Trigger: GTTGCTGTTGTCCCTAGACAAGCCCGTTAGCAAGAA...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp ACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGGCGAACAGAATCTTCTCTaGGGAAGGCCAAGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: TLEEAKHNLEALSELSPGEQNLL*GRPREV
Trigger: GACTTCCCTTGGCCTTCCCAAGAGAAGATTCTGTTC...GCCAGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCGATCTCACACAGCATTaGCTGTACAGACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTDLTQH*LYRLFS
Trigger: GGAAAACAGTCTGTACAGCAAATGCTGTGTGAGATC...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GTTCTGTATCAGACACTCCATCAGGTCCCCAGAGTCTATCTGGTTATCTGCCACTGCTCTAACACGGGGTaGGTGTCACTTCTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: VLYQTLHQVPRVYLVICHCSNTG*VSLLRR
Trigger: TCTTCTCAGAAGTGACACCAACCCCGTGTTAGAGCA...GTGGCAGATAACCAGATAGACTCTGGGGACCTGATGGAGTGTCTGATACAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS GCA 90 bp AGTAGGAGAGCCTGGCTTCACGCGATCGCGGAAGGTTTTCCACATTaGACCGGTATTTCTTCAAGTCACTTTTACAGGATTTGGCCAATG +
Preference number: 5 (lower is better)
Translates to: SRRAWLHAIAEGFPH*TGISSSHFYRIWPM
Trigger: CATTGGCCAAATCCTGTAAAAGTGACTTGAAGAAATACCGGTGCAATGTGGAAAACCTTCCGCGATCGCGTGAAGCCAGGCTCTCCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS GCA 90 bp GGGCACAAGCAGTATGAAGTACCGGGTCAACAAAGATGTCTGCTTTaGTTTCCTTCAGCATGTTTAGCACTTCCTGGAAAGGGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: GHKQYEVPGQQRCLL*FPSACLALPGKGGS
Trigger: TGACCCTCCCTTTCCAGGAAGTGCTAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTGTTGACCCGGTACTTCATACTGCTTGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561942.1
CDS CCA 90 bp GGCCAGGAGAGCCAAGCCAAGATCTTACCTGTGTTCTGGGTGATCTaGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCA +
Preference number: 5 (lower is better)
Translates to: GQESQAKILPVFWVI*RLVIICLHLGSINS
Trigger: TGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGGTAAGATCTTGGCTTGGCTCTCCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS-3UTR CAA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTGCCACAGATTCAAATTaGGGATCTGTAGTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTATDSN*GSVVRF
Trigger: GAACCTAACTACAGATCCCAAATTTGAATCTGTGGC...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCGGTCAATCTAACTCAGTGAGGTaGCCAACTATATCTCTACAC +
Preference number: 5 (lower is better)
Translates to: FTHTGKETAERKDTPPGQSNSVR*PTISLH
Trigger: GTGTAGAGATATAGTTGGCAACCTCACTGAGTTAGA...TTGACCGGGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTTCTAACTCAGTGAGGTaGCCAACTATATCTCTACAC +
Preference number: 5 (lower is better)
Translates to: LHGKIREAICWGHLCCVTSNSVR*PTISLH
Trigger: GTGTAGAGATATAGTTGGCAACCTCACTGAGTTAGA...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTGTGCTTAGCTGCTTCTaGTTTTCTTTCAGACATTCG +
Preference number: 5 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIVLSCF*FSFRHS
Trigger: CGAATGTCTGAAAGAAAACAAGAAGCAGCTAAGCAC...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TGGTGGTCAAGGTGGCTCTACCTGTCCTTGAGCTCTCGTGTCACTCGCTTGGTGTTGGTTATCATCTGTTaGCATTTGGGATCCATCAAT +
Preference number: 5 (lower is better)
Translates to: WWSRWLYLSLSSRVTRLVLVIIC*HLGSIN
Trigger: ATTGATGGATCCCAAATGCAAACAGATGATAACCAA...CACCAAGCGAGTGACACGAGAGCTCAAGGACAGGTAGAGCCACCTTGACCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTTTGATCTTGAGCAGGTaGACCTTGAGGCACTCCTCC +
Preference number: 5 (lower is better)
Translates to: STLEEAKHNLEALSELSPLILSR*TLRHSS
Trigger: GGAGGAGTGCCTCAAGGTCAACCTGCTCAAGATCAA...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCAATTCTGTTTTGATCTaGAGCAGGTTGACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: SPSFEGCTNTELQLGVVANSVLI*SRLTLR
Trigger: CCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATT...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGCCTCACAGAGCTCCCCATCTGTGGGAGAAGCTCCATTGTGAACAGTTCGTCTACAAAGATGTCTGCTTaGCTTTCCTTCAGCATGTTT +
Preference number: 5 (lower is better)
Translates to: GLTELPICGRSSIVNSSSTKMSA*LSFSMF
Trigger: AAACATGCTGAAGGAAAGCAAAGCAGACATCTTTGT...AGACGAACTGTTCACAATGGAGCTTCTCCCACAGATGGGGAGCTCTGTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGACCACAACAAAGATGTCTGCTTaGCTTTCCTTCAGCATGTTT +
Preference number: 5 (lower is better)
Translates to: SGVCRKVRLDCLSHPETTTKMSA*LSFSMF
Trigger: AAACATGCTGAAGGAAAGCAAAGCAGACATCTTTGT...TGTGGTCTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CAA 90 bp CAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCACTCAACATTAGCTATCTCAATCCGGTCATaGAGGCGCTTTTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: QPKACSVFKSIPAHSTLAISIRS*RRFLHS
Trigger: CGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGAT...AGCTAATGTTGAGTGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATTGGAGACGTCATTACTaGCATGGCAAGATCAGAGAA +
Preference number: 5 (lower is better)
Translates to: SRVTRLVIRPHIRPIRNNWRRHY*HGKIRE
Trigger: TTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCA...ATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTGAGGCACAAAGGAGCTaGTCTGGGAAGTTTGTCTGG +
Preference number: 5 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFEAQRS*SGKFVW
Trigger: CCAGACAAACTTCCCAGACAAGCTCCTTTGTGCCTC...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CTCCACACTGGAGGAATGAGGCGGGATGGCCAAGAATATTGCTTCTATAAAGCCCAGACTTTGCTGGCCTaGGCACTTAGAAAAACTTGC +
Preference number: 5 (lower is better)
Translates to: LHTGGMRRDGQEYCFYKAQTLLA*ALRKTC
Trigger: GCAAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTG...GGCTTTATAGAAGCAATATTCTTGGCCATCCCGCCTCATTCCTCCAGTGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGTTCTTGCTAACGGGCTaGTCTAGGGACAACAGCAAC +
Preference number: 5 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQFLLTG*SRDNSN
Trigger: GTTGCTGTTGTCCCTAGACAAGCCCGTTAGCAAGAA...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTCCTAGCTTTGAAGGATGCACTAACACAGAACTGCAGCTGGGGGTGGTAGCCAGAATTCTCCTAGCTTaGAAGGATGCACTAACACAG +
Preference number: 5 (lower is better)
Translates to: SPSFEGCTNTELQLGVVARILLA*KDALTQ
Trigger: CTGTGTTAGTGCATCCTTCAAAGCTAGGAGAATTCT...GGCTACCACCCCCAGCTGCAGTTCTGTGTTAGTGCATCCTTCAAAGCTAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AAGCTCCATTGTGAACAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCAAGGCAGGACAATCGCTaGAACCAGGGAGTCGGAGGA +
Preference number: 5 (lower is better)
Translates to: KLHCEQFVLFLIVCPDSSRQDNR*NQGVGG
Trigger: TCCTCCGACTCCCTGGTTCAAGCGATTGTCCTGCCT...TGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTGTTCACAATGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTAGGCAGGAGAACTGCTaGAACCTAGGAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: STLEEAKHNLEALSELSPRQENC*NLGGRS
Trigger: ACTTCTGCCTCCTAGGTTCAAGCAGTTCTCCTGCCT...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS TCA 90 bp CCTGGAAAAATTAAAAATGCTCCTTTAGCCTATGGGACCTCCATGTaGGAACTACCATCGCCAGATGCTCTGTCCAGACAGTCCGAGTGT +
Preference number: 5 (lower is better)
Translates to: PGKIKNAPLAYGTSM*ELPSPDALSRQSEC
Trigger: ACACTCGGACTGTCTGGACAGAGCATCTGGCGATGGTAGTTCTCACATGGAGGTCCCATAGGCTAAAGGAGCATTTTTAATTTTTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS TCA 90 bp AATCAAACACAAAAGGCCAGGATGCTGGCAGCCACTCTCCTCCAATaGGTAAGCTGCATACCACTTACCTCTGATTCTAACTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: NQTQKARMLAATLLQ*VSCIPLTSDSNSVR
Trigger: CCTCACTGAGTTAGAATCAGAGGTAAGTGGTATGCAGCTTACTCATTGGAGGAGAGTGGCTGCCAGCATCCTGGCCTTTTGTGTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567911.1
CDS GCA 90 bp TACAGATTCACAAGCTTCATTCAAAGCTCGATCAATGCGGTAATCTaGACCAGGGTCAGTCTCCTGAATCAGTGTTTGAAGCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: YRFTSFIQSSINAVI*TRVSLLNQCLKRLL
Trigger: CAGCAGGCGCTTCAAACACTGATTCAGGAGACTGACCCTGGTGCAGATTACCGCATTGATCGAGCTTTGAATGAAGCTTGTGAATCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS-3UTR CAA 90 bp GAGTGGAGGCTGGATGGGACAACGCAGTGGACATCTGCTAATGCTCTAACACGGCCACATTTCAGAATGTaGATGTCATTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: EWRLDGTTQWTSANALTRPHFRM*MSFLQS
Trigger: TGACTGCAAAAATGACATCAACATTCTGAAATGTGG...CCGTGTTAGAGCATTAGCAGATGTCCACTGCGTTGTCCCATCCAGCCTCCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CTACCTGCAAACCACACCAGGCACGTCCGTAGGCACCTCCATGTACATGACATTTTTTTGATGTCACTCTaGCAGGCTTCGTATAGATCT +
Preference number: 5 (lower is better)
Translates to: LPANHTRHVRRHLHVHDIFLMSL*QASYRS
Trigger: AGATCTATACGAAGCCTGCAAGAGTGACATCAAAAA...AATGTCATGTACATGGAGGTGCCTACGGACGTGCCTGGTGTGGTTTGCAGGTAG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTCTCTTTATCATCTGCTaGCAGACCCTCATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLLFIIC*QTLMRV
Trigger: CACCCTCATGAGGGTCTGCAAGCAGATGATAAAGAG...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GTCTCCTGCAGCTTAAATACTTTTTGGTGGCAGCGGGTGCTTAGCTGCTTCTTGAATTCTGAATCATCCTaGGCCTTAGTCAGGATACCG +
Preference number: 5 (lower is better)
Translates to: VSCSLNTFWWQRVLSCFLNSESS*ALVRIP
Trigger: CGGTATCCTGACTAAGGCCAAGGATGATTCAGAATT...CAAGAAGCAGCTAAGCACCCGCTGCCACCAAAAAGTATTTAAGCTGCAGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCATCTACAAAGATGTCTGCTTaGCTTTCCTTCAGCATGTTT +
Preference number: 5 (lower is better)
Translates to: HSCRLRIDLAPSGCPPSSTKMSA*LSFSMF
Trigger: AAACATGCTGAAGGAAAGCAAAGCAGACATCTTTGT...AGATGACGGAGGACATCCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TTGCATGGCAAGATCAGAGAAGCCATCTGCTGGGGCCACCTTTGCTGCGTAACTACAAAGATGTCTGCTTaGCTTTCCTTCAGCATGTTT +
Preference number: 5 (lower is better)
Translates to: LHGKIREAICWGHLCCVTTKMSA*LSFSMF
Trigger: AAACATGCTGAAGGAAAGCAAAGCAGACATCTTTGT...AGTTACGCAGCAAAGGTGGCCCCAGCAGATGGCTTCTCTGATCTTGCCATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTATCTCAATCCGGTCATaGAGGCGCTTTTTGCACTCG +
Preference number: 5 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFISIRS*RRFLHS
Trigger: CGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGAT...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CTGGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATGGGCTCACAGGCTCTTGGAGACGTCATTACTaGCATGGCAAGATCAGAGAA +
Preference number: 5 (lower is better)
Translates to: LVICHIVAEVLNYGLTGSWRRHY*HGKIRE
Trigger: TTCTCTGATCTTGCCATGCAAGTAATGACGTCTCCA...AGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TGTTGGTGGGCTACACATCAGGAGAGTAGACACAGGCCAGAGTCCATCATCCACTGTGAACAGTTCGTCTaGTTCTTAATAGTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: CWWATHQESRHRPESIIHCEQFV*FLIVCP
Trigger: TGGGCAAACTATTAAGAACAAGACGAACTGTTCACA...GTGGATGATGGACTCTGGCCTGTGTCTACTCTCCTGATGTGTAGCCCACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp AGTTTGTCTGGAGTGTGCAGAAAGGTCAGGCTGGACTGCCTGTCACATCCTGAGTGTGAACAGTTCGTCTaGTTCTTAATAGTTTGCCCA +
Preference number: 5 (lower is better)
Translates to: SLSGVCRKVRLDCLSHPECEQFV*FLIVCP
Trigger: TGGGCAAACTATTAAGAACAAGACGAACTGTTCACA...CTCAGGATGTGACAGGCAGTCCAGCCTGACCTTTCTGCACACTCCAGACAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CAA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCAAGAATTCTCCTAGCTTaGAAGGATGCACTAACACAG +
Preference number: 5 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSRILLA*KDALTQ
Trigger: CTGTGTTAGTGCATCCTTCAAAGCTAGGAGAATTCT...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS GCA 90 bp CTTGTTAACGAGTACTTCTGGAGGTCCTCAGGAATCTTTCTACTCTaGGGGGTTTTGTGCAGACTCCAATACTCTAAGGAGTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LVNEYFWRSSGIFLL*GVLCRLQYSKESSE
Trigger: TTCTGAGGACTCCTTAGAGTATTGGAGTCTGCACAAAACCCCGCAGAGTAGAAAGATTCCTGAGGACCTCCAGAAGTACTCGTTAACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CCA 90 bp GGTCTAAGTGAAAGTCATCCGATGACAGCTCAGCCACCCGGAGAATaGCTTTCTTGCAGAGTTCAGAAACTTGAATCTTGGGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GLSESHPMTAQPPGE*LSCRVQKLESWVLF
Trigger: AAAGAGAACCCAAGATTCAAGTTTCTGAACTCTGCAAGAAAGCCATTCTCCGGGTGGCTGAGCTGTCATCGGATGACTTTCACTTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS-3UTR CAA 90 bp CTGGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATGGGCTCACAGGCTCTGCCACAGATTCAAATTaGGGATCTGTAGTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: LVICHIVAEVLNYGLTGSATDSN*GSVVRF
Trigger: GAACCTAACTACAGATCCCAAATTTGAATCTGTGGC...AGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TCTGCTCTTGGGCTGCTGCTTCTTCAGCACATAGACTGGAGATCTCGTCTGAGCCCACATTTCAGAATGTaGATGTCATTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SALGLLLLQHIDWRSRLSPHFRM*MSFLQS
Trigger: TGACTGCAAAAATGACATCAACATTCTGAAATGTGG...GCTCAGACGAGATCTCCAGTCTATGTGCTGAAGAAGCAGCAGCCCAAGAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGTCTGCCCTCACCAGCTaGTGTATTTTCACAAAAACG +
Preference number: 5 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQSALTS*CIFTKT
Trigger: CGTTTTTGTGAAAATACACAAGCTGGTGAGGGCAGA...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTCGTGTCACTCGCTTGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATTTTTTGATGTCACTCTaGCAGGCTTCGTATAGATCT +
Preference number: 5 (lower is better)
Translates to: SRVTRLVIRPHIRPIRNNFLMSL*QASYRS
Trigger: AGATCTATACGAAGCCTGCAAGAGTGACATCAAAAA...ATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GTAACTCCGATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCGCGGAACAGAAGTTTTaGATGTCACTCTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VTPMAHFSFMSFWCLFCIAEQKF*MSLLQA
Trigger: AGCCTGCAAGAGTGACATCAAAAACTTCTGTTCCGC...GATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATCGGAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp AAAAAGCCATTACGGCCAAAATTTAGGCTGACTGTTCTAGGGCTGGCTGACTTCTGGGTGATCTGGCGCTaGGTTATCATCTGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: KKPLRPKFRLTVLGLADFWVIWR*VIICLH
Trigger: ATGCAAACAGATGATAACCAAGCGCCAGATCACCCA...GAAGTCAGCCAGCCCTAGAACAGTCAGCCTAAATTTTGGCCGTAATGGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAATGGGTGATCTGGCGCTaGGTTATCATCTGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQWVIWR*VIICLH
Trigger: ATGCAAACAGATGATAACCAAGCGCCAGATCACCCA...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TTCTTTCAGACATTCGATAATCTGAGCGTTGCCATATTGCACAGCGGAACAGAATCATTGAGGCGCTTTTaGCACTCGGGCTGTAACCTC +
Preference number: 5 (lower is better)
Translates to: FFQTFDNLSVAILHSGTESLRRF*HSGCNL
Trigger: GAGGTTACAGCCCGAGTGCAAAAAGCGCCTCAATGA...TTCTGTTCCGCTGTGCAATATGGCAACGCTCAGATTATCGAATGTCTGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp GAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGGCACTAACCTTTATAAGCCATaGTCTCTGACCTGTATTGTA +
Preference number: 5 (lower is better)
Translates to: EERGEWGCYTRGLYKLGTNLYKP*SLTCIV
Trigger: TACAATACAGGTCAGAGACAATGGCTTATAAAGGTT...AGTGCCCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422840.7
CDS-3UTR CAA 90 bp AAGGGTGTTTACGCATACTGGGAAGGAGACTGCAGAGAGGAAGGATACCCCACCCATATTCTGCAAAGGTaGATGAATCGCCAAAATACA +
Preference number: 5 (lower is better)
Translates to: KGVYAYWEGDCREEGYPTHILQR*MNRQNT
Trigger: TGTATTTTGGCGATTCATCAACCTTTGCAGAATATG...GGTGGGGTATCCTTCCTCTCTGCAGTCTCCTTCCCAGTATGCGTAAACACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CAGTTCGTCTTGTTCTTAATAGTTTGCCCAGACAGCTCACCTTCAGTACCCCAGCTTGTTCTTAATAGTTaGCCCAGACAGCTCACCTTC +
Preference number: 5 (lower is better)
Translates to: QFVLFLIVCPDSSPSVPQLVLNS*PRQLTF
Trigger: GAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAG...CTGGGGTACTGAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAGACGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCCAGTTTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTTGTTCTTAATAGTTaGCCCAGACAGCTCACCTTC +
Preference number: 5 (lower is better)
Translates to: SSFRRLKHPRQLLTIRKTLVLNS*PRQLTF
Trigger: GAAGGTGAGCTGTCTGGGCAAACTATTAAGAACAAG...GGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAAACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS CCA 90 bp ACAAAGATGTCTGCTTTGCTTTCCTTCAGCATGTTTAGCACTTCCTaGAAAGGGAGGGTCATTGCAGACAGAGCTTTTGAAGGGGAAATG +
Preference number: 5 (lower is better)
Translates to: TKMSALLSFSMFSTS*KGRVIADRAFEGEM
Trigger: CATTTCCCCTTCAAAAGCTCTGTCTGCAATGACCCTCCCTTTCCAGGAAGTGCTAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561942.1
CDS CCA 90 bp CTCACACTGCACCCTGCTTCTCTAAGTACACAATCCAGCCCTACTTaGTCAGTTAGATGGCCTGACCTGGAAAAATTAAAAATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LTLHPASLSTQSSPT*SVRWPDLEKLKMLL
Trigger: AAGGAGCATTTTTAATTTTTCCAGGTCAGGCCATCTAACTGACCAAGTAGGGCTGGATTGTGTACTTAGAGAAGCAGGGTGCAGTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS-3UTR CAA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAAGGGCAGGATCCAGCTaGACATCCATGGCACGCTGG +
Preference number: 5 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTRAGSS*TSMARW
Trigger: CCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCT...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCTCTAACTCAGTGAGGTaGCCAACTATATCTCTACAC +
Preference number: 5 (lower is better)
Translates to: VFWVIWRLVIICLHLGSISNSVR*PTISLH
Trigger: GTGTAGAGATATAGTTGGCAACCTCACTGAGTTAGA...GATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CCAGATGGCTTTGGGGAGCTCTTCACCCTAAAGATTCGGTCTGGTTTGCTAATGTTTTTGATGTCACTCTaGCAGGCTTCGTATAGATCT +
Preference number: 5 (lower is better)
Translates to: PDGFGELFTLKIRSGLLMFLMSL*QASYRS
Trigger: AGATCTATACGAAGCCTGCAAGAGTGACATCAAAAA...CATTAGCAAACCAGACCGAATCTTTAGGGTGAAGAGCTCCCCAAAGCCATCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GGACAGCATGAGACAGCCAAAGGCCTGCAGTGTGTTCAAGTCAATACCTGCTCATTGGTTATCATCTGTTaGCATTTGGGATCCATCAAT +
Preference number: 5 (lower is better)
Translates to: GQHETAKGLQCVQVNTCSLVIIC*HLGSIN
Trigger: ATTGATGGATCCCAAATGCAAACAGATGATAACCAA...TGAGCAGGTATTGACTTGAACACACTGCAGGCCTTTGGCTGTCTCATGCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TCTGAGAAGAGCGAGGTGAGTGGGGATGCTATACAAGAGGGCTGTACAAACTGGTTGGTTATCATCTGTTaGCATTTGGGATCCATCAAT +
Preference number: 5 (lower is better)
Translates to: SEKSEVSGDAIQEGCTNWLVIIC*HLGSIN
Trigger: ATTGATGGATCCCAAATGCAAACAGATGATAACCAA...CCAGTTTGTACAGCCCTCTTGTATAGCATCCCCACTCACCTCGCTCTTCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422840.7
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TTTAGGAGACTGAAGCATCCCAGACAGCTGTTGACAATCAGGAAGACCCTACAAGATCTCACACAGCATTaGCTGTACAGACTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: FRRLKHPRQLLTIRKTLQDLTQH*LYRLFS
Trigger: GGAAAACAGTCTGTACAGCAAATGCTGTGTGAGATC...TTGTAGGGTCTTCCTGATTGTCAACAGCTGTCTGGGATGCTTCAGTCTCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS TCA 90 bp CAACTCACTGTGACCATTAACTTACGAGGTCTTCCAACTCAGAGGTaGAATGTTTCTGTTCCGAATCAGATTACCCGTACATTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QLTVTINLRGLPTQR*NVSVPNQITRTFSW
Trigger: CCAGGAGAATGTACGGGTAATCTGATTCGGAACAGAAACATTTCACCTCTGAGTTGGAAGACCTCGTAAGTTAATGGTCACAGTGAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS GCA 90 bp CTGTCTGGATTACAGATTCACAAGCTTCATTCAAAGCTCGATCAATaGGGTAATCTGCACCAGGGTCAGTCTCCTGAATCAGTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: LSGLQIHKLHSKLDQ*GNLHQGQSPESVFE
Trigger: TTCAAACACTGATTCAGGAGACTGACCCTGGTGCAGATTACCGCATTGATCGAGCTTTGAATGAAGCTTGTGAATCTGTAATCCAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS GCA 90 bp CCATCAGGCACGACAAGATCATTGGGTCTCCAGATCTTATATGTTTaGAGGCTGTCTGGATTACAGATTCACAAGCTTCATTCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: PSGTTRSLGLQILYV*RLSGLQIHKLHSKL
Trigger: GAGCTTTGAATGAAGCTTGTGAATCTGTAATCCAGACAGCCTGCAAACATATAAGATCTGGAGACCCAATGATCTTGTCGTGCCTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS-3UTR CAA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTGCCACAGATTCAAATTaGGGATCTGTAGTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLATDSN*GSVVRF
Trigger: GAACCTAACTACAGATCCCAAATTTGAATCTGTGGC...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CTGGTTATCTGCCACATCGTGGCAGAAGTTCTGAATTATGGGCTCACAGGCTCTCCACATTTCAGAATGTaGATGTCATTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LVICHIVAEVLNYGLTGSPHFRM*MSFLQS
Trigger: TGACTGCAAAAATGACATCAACATTCTGAAATGTGG...AGAGCCTGTGAGCCCATAATTCAGAACTTCTGCCACGATGTGGCAGATAACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp CTTAATGAGTGCGGCCAGTTCAGACTTTGCTGGCCTTGGCACTTAGAAAAACTTTCTAACTCAGTGAGGTaGCCAACTATATCTCTACAC +
Preference number: 5 (lower is better)
Translates to: LNECGQFRLCWPWHLEKLSNSVR*PTISLH
Trigger: GTGTAGAGATATAGTTGGCAACCTCACTGAGTTAGA...AAGTTTTTCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCGCACTCATTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp CAGAAGTTTTTGATGTCACTCTTGCAGGCTTCGTATAGATCTGGCTCCAAGCGGTTTTTGATGTCACTCTaGCAGGCTTCGTATAGATCT +
Preference number: 5 (lower is better)
Translates to: QKFLMSLLQASYRSGSKRFLMSL*QASYRS
Trigger: AGATCTATACGAAGCCTGCAAGAGTGACATCAAAAA...CCGCTTGGAGCCAGATCTATACGAAGCCTGCAAGAGTGACATCAAAAACTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TCTACATTGGAGGAGGCAAAACACAATCTAGAGGCACTGTCTGAACTTTCCCCTGTGCTTAGCTGCTTCTaGTTTTCTTTCAGACATTCG +
Preference number: 5 (lower is better)
Translates to: STLEEAKHNLEALSELSPVLSCF*FSFRHS
Trigger: CGAATGTCTGAAAGAAAACAAGAAGCAGCTAAGCAC...AGGGGAAAGTTCAGACAGTGCCTCTAGATTGTGTTTTGCCTCCTCCAATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp GATGGCACACTTCTCGTTCATGTCCTTCTGGTGTTTGTTCTGTATCAGACACTCAATTCTGTTTTGATCTaGAGCAGGTTGACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: DGTLLVHVLLVFVLYQTLNSVLI*SRLTLR
Trigger: CCTCAAGGTCAACCTGCTCAAGATCAAAACAGAATT...GAGTGTCTGATACAGAACAAACACCAGAAGGACATGAACGAGAAGTGTGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACACTGCTGGGGCCACCTTaGCTGCGTAACTCCACATCT +
Preference number: 5 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTLLGPP*LRNSTS
Trigger: AGATGTGGAGTTACGCAGCAAAGGTGGCCCCAGCAG...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACACGGCCAGTTCAGACTTaGCTGGCCTTGGCACTTAGA +
Preference number: 5 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTRPVQT*LALALR
Trigger: TCTAAGTGCCAAGGCCAGCAAAGTCTGAACTGGCCG...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS TCA 90 bp GGCACATGTGTGCAACGACAGTTCAACATCTGTGTTAAAAACATGTaGCCACAGAGGAATGCTGCTCTTAACTCTAGGACTGTACTTTTG +
Preference number: 5 (lower is better)
Translates to: GTCVQRQFNICVKNM*PQRNAALNSRTVLL
Trigger: CAAAAGTACAGTCCTAGAGTTAAGAGCAGCATTCCTCTGTGGTCACATGTTTTTAACACAGATGTTGAACTGTCGTTGCACACATGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS GCA 90 bp TGCATCTTGTCTAGTGACCCTGGCTTCTACATAGCAAAGTCGCCTTaGAGCAAGAGAATCAGGCTTTACTTTCAATTCTGTCACCAAATA +
Preference number: 5 (lower is better)
Translates to: CILSSDPGFYIAKSP*SKRIRLYFQFCHQI
Trigger: TATTTGGTGACAGAATTGAAAGTAAAGCCTGATTCTCTTGCTGCAAGGCGACTTTGCTATGTAGAAGCCAGGGTCACTAGACAAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CCA 90 bp GACAAGATCATTGGGTCTCCAGATCTTATATGTTTGCAGGCTGTCTaGATTACAGATTCACAAGCTTCATTCAAAGCTCGATCAATGCGG +
Preference number: 5 (lower is better)
Translates to: DKIIGSPDLICLQAV*ITDSQASFKARSMR
Trigger: CCGCATTGATCGAGCTTTGAATGAAGCTTGTGAATCTGTAATCCAGACAGCCTGCAAACATATAAGATCTGGAGACCCAATGATCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS-3UTR CAA 90 bp GTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGGTGCTTAGCTGCTTCTaGTTTTCTTTCAGACATTCG +
Preference number: 5 (lower is better)
Translates to: VIWRLVIICLHLGSINSLVLSCF*FSFRHS
Trigger: CGAATGTCTGAAAGAAAACAAGAAGCAGCTAAGCAC...CAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000567951.5
CDS-3UTR CAA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACATCATTGAGGCGCTTTTaGCACTCGGGCTGTAACCTC +
Preference number: 5 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTSLRRF*HSGCNL
Trigger: GAGGTTACAGCCCGAGTGCAAAAAGCGCCTCAATGA...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS TCA 90 bp AGAAATATGGAACAACGCTTTAGAGTGTCAGGACTAATGCCAAGTTaGATTCAGTGTTACAAAGAACAGGAATGCAGACCATGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: RNMEQRFRVSGLMPS*IQCYKEQECRPWRA
Trigger: GGCTCTCCATGGTCTGCATTCCTGTTCTTTGTAACACTGAATTCAACTTGGCATTAGTCCTGACACTCTAAAGCGTTGTTCCATATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561481.1
ENST00000563646.1
CDS-3UTR CAA 90 bp ACAGGCCAGAGTCCATCATCCACTCACATCCACAGAAGGGTCATTGTTTCTTTTCATATTCTGCAAAGGTaGATGAATCGCCAAAATACA +
Preference number: 5 (lower is better)
Translates to: TGQSPSSTHIHRRVIVSFHILQR*MNRQNT
Trigger: TGTATTTTGGCGATTCATCAACCTTTGCAGAATATG...AAAAGAAACAATGACCCTTCTGTGGATGTGAGTGGATGATGGACTCTGGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS TCA 90 bp ATTGCACCGGTATTTCTTCAAGTCACTTTTACAGGATTTGGCCAATaGATAACTGACTTTATAATCCTGGGCAATCAGCTTTTGGCGGGT +
Preference number: 5 (lower is better)
Translates to: IAPVFLQVTFTGFGQ*ITDFIILGNQLLAG
Trigger: ACCCGCCAAAAGCTGATTGCCCAGGATTATAAAGTCAGTTATTCATTGGCCAAATCCTGTAAAAGTGACTTGAAGAAATACCGGTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS CCA 90 bp GTAAGTGCTTCTCGACACTTTTCACTCATGGATTCTTCAAATTTATaGTTAAAGAGGCACTTATACACTCTGCCCTCACCAGCTTGTGTA +
Preference number: 5 (lower is better)
Translates to: VSASRHFSLMDSSNL*LKRHLYTLPSPACV
Trigger: TACACAAGCTGGTGAGGGCAGAGTGTATAAGTGCCTCTTTAACCATAAATTTGAAGAATCCATGAGTGAAAAGTGTCGAGAAGCACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS-3UTR CAA 90 bp TATTGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAGCTTGTCTGGGAAGTTaGTCTGGAGTGTGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: YCFYKAHILQRLMNRQNTACLGS*SGVCRK
Trigger: CTTTCTGCACACTCCAGACAAACTTCCCAGACAAGC...TGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS TCA 90 bp CTTAACTCTAGGACTGTACTTTTGACCTACTGTGAAACTCACTCCTaGAAGGTAGAGAAACCTGAGCAAATTGGGAATTTGGTTTGTATG +
Preference number: 5 (lower is better)
Translates to: LNSRTVLLTYCETHS*KVEKPEQIGNLVCM
Trigger: CATACAAACCAAATTCCCAATTTGCTCAGGTTTCTCTACCTTTCAGGAGTGAGTTTCACAGTAGGTCAAAAGTACAGTCCTAGAGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CCA 90 bp AAGTGTTCTAGAAATGGTCCTTTCAAAGAGCAACATGGAAGAATTTaGACAGTCACGCTGAAAAAGCTCATCAGTTTCCTCAAAAAGACT +
Preference number: 5 (lower is better)
Translates to: KCSRNGPFKEQHGRI*TVTLKKLISFLKKT
Trigger: AGTCTTTTTGAGGAAACTGATGAGCTTTTTCAGCGTGACTGTCCAAATTCTTCCATGTTGCTCTTTGAAAGGACCATTTCTAGAACACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS-3UTR CAA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACACCACATTTCAGAATGTaGATGTCATTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTPHFRM*MSFLQS
Trigger: TGACTGCAAAAATGACATCAACATTCTGAAATGTGG...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS-3UTR CAA 90 bp TGCTTCTATAAAGCCCATATTCTGCAAAGGTTGATGAATCGCCAAAATACAACATTGGTTATCATCTGTTaGCATTTGGGATCCATCAAT +
Preference number: 5 (lower is better)
Translates to: CFYKAHILQRLMNRQNTTLVIIC*HLGSIN
Trigger: ATTGATGGATCCCAAATGCAAACAGATGATAACCAA...TGTTGTATTTTGGCGATTCATCAACCTTTGCAGAATATGGGCTTTATAGAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000422840.7
CDS CAA 90 bp CCCGCCGGGCCGCCGCCTCCGGCCTGCCCTACGAAGGACACAAAGTaGGCCCCGGGACCCTGGCCCTGGCTGTGGACGCCCTGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: PAGPPPPACPTKDTK*APGPWPWLWTPWPG
Trigger: CCCCGGCCAGGGCGTCCACAGCCAGGGCCAGGGTCCCGGGGCCAACTTTGTGTCCTTCGTAGGGCAGGCCGGAGGCGGCGGCCCGGCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567951.5
ENST00000627032.2
CDS TCA 72 bp GGAGGCCCACCCGCCGGGAAAGGCGGCTGCGGCGGCTaGGGCTGCTGTTGCTGTTGCTGCTGCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: GGPPAGKGGCGG*GCCCCCCCCCC
Trigger: GCAACAGCAGCAGCAGCAACAGCAACAGCAGCCTCAGCCGCCGCAGCCGCCTTTCCCGGCGGGTGGGCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567951.5
ENST00000627032.2
CDS TCA 72 bp GGAACATCCTCCGTACACGTCCACACGCCGCCATCTTaGGTCCGCGGCGAGCTCGACGCACTCGCCGGCGCC +
Preference number: 6 (lower is better)
Translates to: GTSSVHVHTPPS*VRGELDALAGA
Trigger: GGCGCCGGCGAGTGCGTCGAGCTCGCCGCGGACTCAAGATGGCGGCGTGTGGACGTGTACGGAGGATGTTCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627032.2
CDS CAA 72 bp CGGAACATCCTCCGTACACGTCCACACGCCGCCATCTaGAGTCCGCGGCGAGCTCGACGCACTCGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: RNILRTRPHAAI*SPRRARRTRRR
Trigger: GCGCCGGCGAGTGCGTCGAGCTCGCCGCGGACTCAAGATGGCGGCGTGTGGACGTGTACGGAGGATGTTCCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627032.2
CDS CAA 90 bp GCCGACAAGCGGAACATCCTCCGTACACGTCCACACGCCGCCATCTaGAGTCCGCGGCGAGCTCGACGCACTCGCCGGCGCCGCGTATTT +
Preference number: 6 (lower is better)
Translates to: ADKRNILRTRPHAAI*SPRRARRTRRRRVF
Trigger: AAATACGCGGCGCCGGCGAGTGCGTCGAGCTCGCCGCGGACTCAAGATGGCGGCGTGTGGACGTGTACGGAGGATGTTCCGCTTGTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627032.2
CDS GCA 72 bp AGGCACTCGAGCACCGCCAGGTTGTTGCTCCAGGTGTaGTTAGGGCACACGCGGGTCACGTCCTCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: RHSSTARLLLQV*LGHTRVTSSLQ
Trigger: CTGCAGGGAGGACGTGACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000565260.1
ENST00000567951.5
ENST00000627032.2
CDS CAA 90 bp TCAGGCTCCCTCACATCCTGCAGGCACTCGAGCACCGCCAGGTTGTaGCTCCAGGTGTGCTTAGGGCACACGCGGGTCACGTCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: SGSLTSCRHSSTARL*LQVCLGHTRVTSSL
Trigger: CAGGGAGGACGTGACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGATGTGAGGGAGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000562090.5
ENST00000565260.1
ENST00000567951.5
ENST00000627032.2
CDS GCA 72 bp AGTTTCTCGGCCCCGGCCGCGAATAGCAGCAGCAGATaGAGCGCCGCCGACAAGCGGAACATCCTCCGTACA +
Preference number: 6 (lower is better)
Translates to: SFSAPAANSSSR*SAADKRNILRT
Trigger: TGTACGGAGGATGTTCCGCTTGTCGGCGGCGCTGCATCTGCTGCTGCTATTCGCGGCCGGGGCCGAGAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000565260.1
ENST00000567951.5
ENST00000627032.2
CDS CAA 72 bp CTCACATCCTGCAGGCACTCGAGCACCGCCAGGTTGTaGCTCCAGGTGTGCTTAGGGCACACGCGGGTCACG +
Preference number: 6 (lower is better)
Translates to: LTSCRHSSTARL*LQVCLGHTRVT
Trigger: CGTGACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGATGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000565260.1
ENST00000567951.5
ENST00000627032.2
CDS CAA 72 bp TCCCTCACATCCTGCAGGCACTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGCTTAGGGCACACGCGGGTC +
Preference number: 6 (lower is better)
Translates to: SLTSCRHSSTAR*LLQVCLGHTRV
Trigger: GACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGATGTGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000565260.1
ENST00000567951.5
ENST00000627032.2
CDS CAA 90 bp TTTTCAGGCTCCCTCACATCCTGCAGGCACTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGCTTAGGGCACACGCGGGTCACGTCCTCC +
Preference number: 6 (lower is better)
Translates to: FSGSLTSCRHSSTAR*LLQVCLGHTRVTSS
Trigger: GGAGGACGTGACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGATGTGAGGGAGCCTGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000562090.5
ENST00000565260.1
ENST00000567951.5
ENST00000627032.2
CDS CAA 90 bp AACAACTCCCTCACATCCTGCAGGCACTCGAGCACCGCCAGGTTGTaGCTCCAGGTGTGCTTAGGGCACACGCGGGTCACGTCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: NNSLTSCRHSSTARL*LQVCLGHTRVTSSL
Trigger: CAGGGAGGACGTGACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGATGTGAGGGAGTTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447066.6
CDS CAA 90 bp CACAACAACTCCCTCACATCCTGCAGGCACTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGCTTAGGGCACACGCGGGTCACGTCCTCC +
Preference number: 6 (lower is better)
Translates to: HNNSLTSCRHSSTAR*LLQVCLGHTRVTSS
Trigger: GGAGGACGTGACCCGCGTGTGCCCTAAGCACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGATGTGAGGGAGTTGTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447066.6
CDS GCA 72 bp GGAGGCATTACCATCTCCAGCTCCTCCACACGGAGCTaGCTGCGGCACTTCAGGGACACCCTGTGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: GGITISSSSTRS*LRHFRDTLCSL
Trigger: CAAGGAGCACAGGGTGTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGAGCTGGAGATGGTAATGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS GCA 72 bp GCATTACCATCTCCAGCTCCTCCACACGGAGCTGCCTaGGGCACTTCAGGGACACCCTGTGCTCCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: ALPSPAPPHGAA*GTSGTPCAPWL
Trigger: AAGCCAAGGAGCACAGGGTGTCCCTGAAGTGCCGCAGGCAGCTCCGTGTGGAGGAGCTGGAGATGGTAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CAA 72 bp TGGGTGTGGCAAAGACGAGAAGCGTCTCCCTGGCACTaGCGGTACAGGACAGGGTCCAGCTTCCAATCCCGG +
Preference number: 6 (lower is better)
Translates to: WVWQRREASPWH*RYRTGSSFQSR
Trigger: CCGGGATTGGAAGCTGGACCCTGTCCTGTACCGCAAGTGCCAGGGAGACGCTTCTCGTCTTTGCCACACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS CCA 72 bp CAACCGTGGGTGTGGCAAAGACGAGAAGCGTCTCCCTaGCACTTGCGGTACAGGACAGGGTCCAGCTTCCAA +
Preference number: 6 (lower is better)
Translates to: QPWVWQRREASP*HLRYRTGSSFQ
Trigger: TTGGAAGCTGGACCCTGTCCTGTACCGCAAGTGCCAGGGAGACGCTTCTCGTCTTTGCCACACCCACGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS CAA 90 bp TTCCAACCGTGGGTGTGGCAAAGACGAGAAGCGTCTCCCTGGCACTaGCGGTACAGGACAGGGTCCAGCTTCCAATCCCGGGAGATGAAA +
Preference number: 6 (lower is better)
Translates to: FQPWVWQRREASPWH*RYRTGSSFQSREMK
Trigger: TTTCATCTCCCGGGATTGGAAGCTGGACCCTGTCCTGTACCGCAAGTGCCAGGGAGACGCTTCTCGTCTTTGCCACACCCACGGTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS CCA 72 bp TGGAGGGCAGGATCCAGCTTGACATCCATGGCACGCTaGTGTAGGATCCTTTGGACTTCAGCTCGGCACTCC +
Preference number: 6 (lower is better)
Translates to: WRAGSSLTSMAR*CRILWTSARHS
Trigger: GGAGTGCCGAGCTGAAGTCCAAAGGATCCTACACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567911.1
ENST00000567951.5
ENST00000627032.2
CDS GCA 72 bp CATCGCCAGATGCTCTGTCCAGACAGTCCGAGTGTTTaGCACGCTAATCAAAGGAGAGATGCGGGAGGCCTC +
Preference number: 6 (lower is better)
Translates to: HRQMLCPDSPSV*HANQRRDAGGL
Trigger: GAGGCCTCCCGCATCTCTCCTTTGATTAGCGTGGCAAACACTCGGACTGTCTGGACAGAGCATCTGGCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CCA 72 bp AGCTTGACATCCATGGCACGCTGGTGTAGGATCCTTTaGACTTCAGCTCGGCACTCCCGTGAGAGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: SLTSMARWCRIL*TSARHSRESLL
Trigger: AAGGAGGCTCTCACGGGAGTGCCGAGCTGAAGTCCAAAGGATCCTACACCAGCGTGCCATGGATGTCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567951.5
ENST00000627032.2
CDS GCA 72 bp GGCACTCCCGTGAGAGCCTCCTTCCCTGTTCCTCAGTaGGGTAGGCGTGTCTGTATAAACAAGAGAACACAG +
Preference number: 6 (lower is better)
Translates to: GTPVRASFPVPQ*GRRVCINKRTQ
Trigger: CTGTGTTCTCTTGTTTATACAGACACGCCTACCGCACTGAGGAACAGGGAAGGAGGCTCTCACGGGAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS GCA 72 bp TCGTATAGATCTGGCTCCAAGCGGATGTCCTCCGTCTaGATGAGGGAGCCAGCATGGAAAGGTGAGCTTGGT +
Preference number: 6 (lower is better)
Translates to: SYRSGSKRMSSV*MREPAWKGELG
Trigger: ACCAAGCTCACCTTTCCATGCTGGCTCCCTCATGCAGACGGAGGACATCCGCTTGGAGCCAGATCTATACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CCA 72 bp GGCATAAATTCACTGGTCTCATTCCAACCGTGGGTGTaGCAAAGACGAGAAGCGTCTCCCTGGCACTTGCGG +
Preference number: 6 (lower is better)
Translates to: GINSLVSFQPWV*QRREASPWHLR
Trigger: CCGCAAGTGCCAGGGAGACGCTTCTCGTCTTTGCCACACCCACGGTTGGAATGAGACCAGTGAATTTATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS TCA 72 bp CAATCAGGCACTTATCCTGGAGGGCAGGATCCAGCTTaGCATCCATGGCACGCTGGTGTAGGATCCTTTGGA +
Preference number: 6 (lower is better)
Translates to: QSGTYPGGQDPA*HPWHAGVGSFG
Trigger: TCCAAAGGATCCTACACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCTCCAGGATAAGTGCCTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567911.1
ENST00000567951.5
ENST00000627032.2
CDS GCA 72 bp CTATGGGACCTCCATGTGAGAACTACCATCGCCAGATaGTCTGTCCAGACAGTCCGAGTGTTTGCCACGCTA +
Preference number: 6 (lower is better)
Translates to: LWDLHVRTTIAR*SVQTVRVFATL
Trigger: TAGCGTGGCAAACACTCGGACTGTCTGGACAGAGCATCTGGCGATGGTAGTTCTCACATGGAGGTCCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CCA 72 bp CTGCACCATTTTCCCAGATCAATCAGGCACTTATCCTaGAGGGCAGGATCCAGCTTGACATCCATGGCACGC +
Preference number: 6 (lower is better)
Translates to: LHHFPRSIRHLS*RAGSSLTSMAR
Trigger: GCGTGCCATGGATGTCAAGCTGGATCCTGCCCTCCAGGATAAGTGCCTGATTGATCTGGGAAAATGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567911.1
ENST00000567951.5
ENST00000627032.2
CDS CAA 72 bp TCAATCAGGCACTTATCCTGGAGGGCAGGATCCAGCTaGACATCCATGGCACGCTGGTGTAGGATCCTTTGG +
Preference number: 6 (lower is better)
Translates to: SIRHLSWRAGSS*TSMARWCRILW
Trigger: CCAAAGGATCCTACACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCTCCAGGATAAGTGCCTGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567911.1
ENST00000567951.5
ENST00000627032.2
CDS TCA 72 bp GGTACAGGACAGGGTCCAGCTTCCAATCCCGGGAGATaGAATACTGCAGCTCTAAGAGACGGTGTTCACAGT +
Preference number: 6 (lower is better)
Translates to: GTGQGPASNPGR*NTAALRDGVHS
Trigger: ACTGTGAACACCGTCTCTTAGAGCTGCAGTATTTCATCTCCCGGGATTGGAAGCTGGACCCTGTCCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS TCA 72 bp TCTCGGCTCACTGCAAACTCCATCTCCCGGTTCAAGTaGTTCTCCTGCCTCAGTCTCTCAAGTAGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: SRLTANSISRFK*FSCLSLSSSWD
Trigger: ATCCCAGCTACTTGAGAGACTGAGGCAGGAGAATCACTTGAACCGGGAGATGGAGTTTGCAGTGAGCCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561481.1
ENST00000566601.1
CDS GCA 72 bp GAAACTTCTCTGAGCAGCTCTGTGCGTAACCAGTTTTaGACGCAAATCCCACCTCGTCTGAGCAGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: ETSLSSSVRNQF*TQIPPRLSSAA
Trigger: AGCTGCACTGCTCAGACGAGGTGGGATTTGCGTGCAAAACTGGTTACGCACAGAGCTGCTCAGAGAAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561481.1
ENST00000563646.1
CDS CAA 72 bp TATTGTAGCCTGTCCTTGAGCTCTCGTGTCACTCGCTaGGTGATCCGTCCACACATCAGGCCAATCAGGAAC +
Preference number: 6 (lower is better)
Translates to: YCSLSLSSRVTR*VIRPHIRPIRN
Trigger: GTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGCTACAATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000447066.6
CDS CAA 90 bp TTTCCCAGATCAATCAGGCACTTATCCTGGAGGGCAGGATCCAGCTaGACATCCATGGCACGCTGGTGTAGGATCCTTTGGACTTCAGCT +
Preference number: 6 (lower is better)
Translates to: FPRSIRHLSWRAGSS*TSMARWCRILWTSA
Trigger: AGCTGAAGTCCAAAGGATCCTACACCAGCGTGCCATGGATGTCAAGCTGGATCCTGCCCTCCAGGATAAGTGCCTGATTGATCTGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000567911.1
ENST00000567951.5
ENST00000627032.2
CDS GCA 72 bp ACAGGGTCCAGCTTCCAATCCCGGGAGATGAAATACTaGAGCTCTAAGAGACGGTGTTCACAGTCTTCTACC +
Preference number: 6 (lower is better)
Translates to: TGSSFQSREMKY*SSKRRCSQSST
Trigger: GGTAGAAGACTGTGAACACCGTCTCTTAGAGCTGCAGTATTTCATCTCCCGGGATTGGAAGCTGGACCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS GCA 72 bp AGAGGTCAGTTCGCCTCTTTCACTCACACTGCACCCTaGTTCTCTAAGTACACAATCCAGCCCTACTTGGTC +
Preference number: 6 (lower is better)
Translates to: RGQFASFTHTAP*FSKYTIQPYLV
Trigger: GACCAAGTAGGGCTGGATTGTGTACTTAGAGAAGCAGGGTGCAGTGTGAGTGAAAGAGGCGAACTGACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CCA 72 bp GGCCAGGAGAGCCAAGCCAAGATCTTACCTGTGTTCTaGGTGATCTGGCGCTTGGTTATCATCTGTTTGCAT +
Preference number: 6 (lower is better)
Translates to: GQESQAKILPVF*VIWRLVIICLH
Trigger: ATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGGTAAGATCTTGGCTTGGCTCTCCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CAA 90 bp TCTGACCTGTATTGTAGCCTGTCCTTGAGCTCTCGTGTCACTCGCTaGGTGATCCGTCCACACATCAGGCCAATCAGGAACAATATACAG +
Preference number: 6 (lower is better)
Translates to: SDLYCSLSLSSRVTR*VIRPHIRPIRNNIQ
Trigger: CTGTATATTGTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGCGAGTGACACGAGAGCTCAAGGACAGGCTACAATACAGGTCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000205061.9
ENST00000447066.6
CDS TCA 72 bp TCATCTCGGCAAGCAAAATATAAATGCCGGTCTAAGTaGAAGTCATCCGATGACAGCTCAGCCACCCGGAGA +
Preference number: 6 (lower is better)
Translates to: SSRQAKYKCRSK*KSSDDSSATRR
Trigger: TCTCCGGGTGGCTGAGCTGTCATCGGATGACTTTCACTTAGACCGGCATTTATATTTTGCTTGCCGAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS TCA 72 bp AGGAGAGCCAAGCCAAGATCTTACCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCATCTGTTTGCATTTGG +
Preference number: 6 (lower is better)
Translates to: RRAKPRSYLCSG*SGAWLSSVCIW
Trigger: CCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGGTAAGATCTTGGCTTGGCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS GCA 72 bp GAGTACTTCTGGAGGTCCTCAGGAATCTTTCTACTCTaGGGGGTTTTGTGCAGACTCCAATACTCTAAGGAG +
Preference number: 6 (lower is better)
Translates to: EYFWRSSGIFLL*GVLCRLQYSKE
Trigger: CTCCTTAGAGTATTGGAGTCTGCACAAAACCCCGCAGAGTAGAAAGATTCCTGAGGACCTCCAGAAGTACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CCA 72 bp GAAAGTCATCCGATGACAGCTCAGCCACCCGGAGAATaGCTTTCTTGCAGAGTTCAGAAACTTGAATCTTGG +
Preference number: 6 (lower is better)
Translates to: ESHPMTAQPPGE*LSCRVQKLESW
Trigger: CCAAGATTCAAGTTTCTGAACTCTGCAAGAAAGCCATTCTCCGGGTGGCTGAGCTGTCATCGGATGACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS CCA 72 bp AGCCAAGCCAAGATCTTACCTGTGTTCTGGGTGATCTaGCGCTTGGTTATCATCTGTTTGCATTTGGGATCC +
Preference number: 6 (lower is better)
Translates to: SQAKILPVFWVI*RLVIICLHLGS
Trigger: GGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGGTAAGATCTTGGCTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CAA 90 bp GCTGGAGATGTCATATGTTCTGGAGACTTATTTGTTGACTGCATCTaGTCTAGTGACCCTGGCTTCTACATAGCAAAGTCGCCTTGCAGC +
Preference number: 6 (lower is better)
Translates to: AGDVICSGDLFVDCI*SSDPGFYIAKSPCS
Trigger: GCTGCAAGGCGACTTTGCTATGTAGAAGCCAGGGTCACTAGACAAGATGCAGTCAACAAATAAGTCTCCAGAACATATGACATCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CAA 90 bp GAGTACTTCTGGAGGTCCTCAGGAATCTTTCTACTCTGCGGGGTTTaGTGCAGACTCCAATACTCTAAGGAGTCCTCAGAAAAATCAAGG +
Preference number: 6 (lower is better)
Translates to: EYFWRSSGIFLLCGV*CRLQYSKESSEKSR
Trigger: CCTTGATTTTTCTGAGGACTCCTTAGAGTATTGGAGTCTGCACAAAACCCCGCAGAGTAGAAAGATTCCTGAGGACCTCCAGAAGTACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CAA 90 bp TGCTTTCCTTCAGCATGTTTAGCACTTCCTGGAAAGGGAGGGTCATaGCAGACAGAGCTTTTGAAGGGGAAATGCATCAGATCTGTTGTC +
Preference number: 6 (lower is better)
Translates to: CFPSACLALPGKGGS*QTELLKGKCIRSVV
Trigger: GACAACAGATCTGATGCATTTCCCCTTCAAAAGCTCTGTCTGCAATGACCCTCCCTTTCCAGGAAGTGCTAAACATGCTGAAGGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561942.1
CDS TCA 72 bp ATTAAAAATGCTCCTTTAGCCTATGGGACCTCCATGTaGGAACTACCATCGCCAGATGCTCTGTCCAGACAG +
Preference number: 6 (lower is better)
Translates to: IKNAPLAYGTSM*ELPSPDALSRQ
Trigger: CTGTCTGGACAGAGCATCTGGCGATGGTAGTTCTCACATGGAGGTCCCATAGGCTAAAGGAGCATTTTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CAA 90 bp GAGAGCCAAGCCAAGATCTTACCTGTGTTCTGGGTGATCTGGCGCTaGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACTGTTT +
Preference number: 6 (lower is better)
Translates to: ESQAKILPVFWVIWR*VIICLHLGSINSLF
Trigger: AAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGGTAAGATCTTGGCTTGGCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS TCA 72 bp AGACATATTCCCTTTCGGCCTCTGATTCTAACTCAGTaGGGTTGCCAACTATATCTCTACACTCCACCACCA +
Preference number: 6 (lower is better)
Translates to: RHIPFRPLILTQ*GCQLYLYTPPP
Trigger: TGGTGGTGGAGTGTAGAGATATAGTTGGCAACCTCACTGAGTTAGAATCAGAGGCCGAAAGGGAATATGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562090.5
ENST00000627032.2
CDS GCA 72 bp ACAAGCTTCATTCAAAGCTCGATCAATGCGGTAATCTaGACCAGGGTCAGTCTCCTGAATCAGTGTTTGAAG +
Preference number: 6 (lower is better)
Translates to: TSFIQSSINAVI*TRVSLLNQCLK
Trigger: CTTCAAACACTGATTCAGGAGACTGACCCTGGTGCAGATTACCGCATTGATCGAGCTTTGAATGAAGCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS CAA 72 bp GCCAAGATCTTACCTGTGTTCTGGGTGATCTGGCGCTaGGTTATCATCTGTTTGCATTTGGGATCCATCAAT +
Preference number: 6 (lower is better)
Translates to: AKILPVFWVIWR*VIICLHLGSIN
Trigger: ATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGGTAAGATCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS GCA 72 bp TTACAGATTCACAAGCTTCATTCAAAGCTCGATCAATaGGGTAATCTGCACCAGGGTCAGTCTCCTGAATCA +
Preference number: 6 (lower is better)
Translates to: LQIHKLHSKLDQ*GNLHQGQSPES
Trigger: TGATTCAGGAGACTGACCCTGGTGCAGATTACCGCATTGATCGAGCTTTGAATGAAGCTTGTGAATCTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS GCA 72 bp TCTAGTGACCCTGGCTTCTACATAGCAAAGTCGCCTTaGAGCAAGAGAATCAGGCTTTACTTTCAATTCTGT +
Preference number: 6 (lower is better)
Translates to: SSDPGFYIAKSP*SKRIRLYFQFC
Trigger: ACAGAATTGAAAGTAAAGCCTGATTCTCTTGCTGCAAGGCGACTTTGCTATGTAGAAGCCAGGGTCACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS GCA 72 bp CAGTATGAAGTACCGGGTCAACAAAGATGTCTGCTTTaGTTTCCTTCAGCATGTTTAGCACTTCCTGGAAAG +
Preference number: 6 (lower is better)
Translates to: QYEVPGQQRCLL*FPSACLALPGK
Trigger: CTTTCCAGGAAGTGCTAAACATGCTGAAGGAAAGCAAAGCAGACATCTTTGTTGACCCGGTACTTCATACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561942.1
CDS CCA 72 bp CACCCTGCTTCTCTAAGTACACAATCCAGCCCTACTTaGTCAGTTAGATGGCCTGACCTGGAAAAATTAAAA +
Preference number: 6 (lower is better)
Translates to: HPASLSTQSSPT*SVRWPDLEKLK
Trigger: TTTTAATTTTTCCAGGTCAGGCCATCTAACTGACCAAGTAGGGCTGGATTGTGTACTTAGAGAAGCAGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CAA 90 bp TCCATCAGGCACGACAAGATCATTGGGTCTCCAGATCTTATATGTTaGCAGGCTGTCTGGATTACAGATTCACAAGCTTCATTCAAAGCT +
Preference number: 6 (lower is better)
Translates to: SIRHDKIIGSPDLIC*QAVWITDSQASFKA
Trigger: AGCTTTGAATGAAGCTTGTGAATCTGTAATCCAGACAGCCTGCAAACATATAAGATCTGGAGACCCAATGATCTTGTCGTGCCTGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS CAA 90 bp CCATCTTCTCTGTGTATAAATGTTCCATCAGGCACGACAAGATCATaGGGTCTCCAGATCTTATATGTTTGCAGGCTGTCTGGATTACAG +
Preference number: 6 (lower is better)
Translates to: PSSLCINVPSGTTRS*GLQILYVCRLSGLQ
Trigger: CTGTAATCCAGACAGCCTGCAAACATATAAGATCTGGAGACCCAATGATCTTGTCGTGCCTGATGGAACATTTATACACAGAGAAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS TCA 72 bp GTGACCATTAACTTACGAGGTCTTCCAACTCAGAGGTaGAATGTTTCTGTTCCGAATCAGATTACCCGTACA +
Preference number: 6 (lower is better)
Translates to: VTINLRGLPTQR*NVSVPNQITRT
Trigger: TGTACGGGTAATCTGATTCGGAACAGAAACATTTCACCTCTGAGTTGGAAGACCTCGTAAGTTAATGGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS TCA 72 bp GTGCAACGACAGTTCAACATCTGTGTTAAAAACATGTaGCCACAGAGGAATGCTGCTCTTAACTCTAGGACT +
Preference number: 6 (lower is better)
Translates to: VQRQFNICVKNM*PQRNAALNSRT
Trigger: AGTCCTAGAGTTAAGAGCAGCATTCCTCTGTGGTCACATGTTTTTAACACAGATGTTGAACTGTCGTTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS GCA 72 bp GGAGATGTCATATGTTCTGGAGACTTATTTGTTGACTaGATCTTGTCTAGTGACCCTGGCTTCTACATAGCA +
Preference number: 6 (lower is better)
Translates to: GDVICSGDLFVD*ILSSDPGFYIA
Trigger: TGCTATGTAGAAGCCAGGGTCACTAGACAAGATGCAGTCAACAAATAAGTCTCCAGAACATATGACATCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CAA 72 bp CTGTGTATAAATGTTCCATCAGGCACGACAAGATCATaGGGTCTCCAGATCTTATATGTTTGCAGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: LCINVPSGTTRS*GLQILYVCRLS
Trigger: AGACAGCCTGCAAACATATAAGATCTGGAGACCCAATGATCTTGTCGTGCCTGATGGAACATTTATACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS CAA 72 bp GTCATATGTTCTGGAGACTTATTTGTTGACTGCATCTaGTCTAGTGACCCTGGCTTCTACATAGCAAAGTCG +
Preference number: 6 (lower is better)
Translates to: VICSGDLFVDCI*SSDPGFYIAKS
Trigger: CGACTTTGCTATGTAGAAGCCAGGGTCACTAGACAAGATGCAGTCAACAAATAAGTCTCCAGAACATATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CAA 72 bp TTTAGGCTGGAGATGTCATATGTTCTGGAGACTTATTaGTTGACTGCATCTTGTCTAGTGACCCTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: FRLEMSYVLETY*LTASCLVTLAS
Trigger: AGAAGCCAGGGTCACTAGACAAGATGCAGTCAACAAATAAGTCTCCAGAACATATGACATCTCCAGCCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CAA 90 bp TGTGCATCCTTTTCTCCAAGCCGAATACTGCCACATTTCAGAATGTaGATGTCATTTTTGCAGTCATCCATGAAGCCACAGATTAAACGG +
Preference number: 6 (lower is better)
Translates to: CASFSPSRILPHFRM*MSFLQSSMKPQIKR
Trigger: CCGTTTAATCTGTGGCTTCATGGATGACTGCAAAAATGACATCAACATTCTGAAATGTGGCAGTATTCGGCTTGGAGAAAAGGATGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000565474.1
ENST00000567951.5
ENST00000627032.2
CDS CAA 90 bp TGTTTAGCACTTCCTGGAAAGGGAGGGTCATTGCAGACAGAGCTTTaGAAGGGGAAATGCATCAGATCTGTTGTCTGTAAATACTTCATA +
Preference number: 6 (lower is better)
Translates to: CLALPGKGGSLQTEL*KGKCIRSVVCKYFI
Trigger: TATGAAGTATTTACAGACAACAGATCTGATGCATTTCCCCTTCAAAAGCTCTGTCTGCAATGACCCTCCCTTTCCAGGAAGTGCTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561942.1
CDS TCA 72 bp TCAAGTCACTTTTACAGGATTTGGCCAATGAATAACTaGCTTTATAATCCTGGGCAATCAGCTTTTGGCGGG +
Preference number: 6 (lower is better)
Translates to: SSHFYRIWPMNN*LYNPGQSAFGG
Trigger: CCCGCCAAAAGCTGATTGCCCAGGATTATAAAGTCAGTTATTCATTGGCCAAATCCTGTAAAAGTGACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS TCA 72 bp AGGACTGTACTTTTGACCTACTGTGAAACTCACTCCTaGAAGGTAGAGAAACCTGAGCAAATTGGGAATTTG +
Preference number: 6 (lower is better)
Translates to: RTVLLTYCETHS*KVEKPEQIGNL
Trigger: CAAATTCCCAATTTGCTCAGGTTTCTCTACCTTTCAGGAGTGAGTTTCACAGTAGGTCAAAAGTACAGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS GCA 72 bp GGAGGGTCATTGCAGACAGAGCTTTTGAAGGGGAAATaGATCAGATCTGTTGTCTGTAAATACTTCATATAC +
Preference number: 6 (lower is better)
Translates to: GGSLQTELLKGK*IRSVVCKYFIY
Trigger: GTATATGAAGTATTTACAGACAACAGATCTGATGCATTTCCCCTTCAAAAGCTCTGTCTGCAATGACCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561942.1
CDS CCA 72 bp ATTGGGTCTCCAGATCTTATATGTTTGCAGGCTGTCTaGATTACAGATTCACAAGCTTCATTCAAAGCTCGA +
Preference number: 6 (lower is better)
Translates to: IGSPDLICLQAV*ITDSQASFKAR
Trigger: TCGAGCTTTGAATGAAGCTTGTGAATCTGTAATCCAGACAGCCTGCAAACATATAAGATCTGGAGACCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2
CDS CCA 72 bp AGAAATGGTCCTTTCAAAGAGCAACATGGAAGAATTTaGACAGTCACGCTGAAAAAGCTCATCAGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: RNGPFKEQHGRI*TVTLKKLISFL
Trigger: GAGGAAACTGATGAGCTTTTTCAGCGTGACTGTCCAAATTCTTCCATGTTGCTCTTTGAAAGGACCATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CAA 72 bp TTTTCTCCAAGCCGAATACTGCCACATTTCAGAATGTaGATGTCATTTTTGCAGTCATCCATGAAGCCACAG +
Preference number: 6 (lower is better)
Translates to: FSPSRILPHFRM*MSFLQSSMKPQ
Trigger: CTGTGGCTTCATGGATGACTGCAAAAATGACATCAACATTCTGAAATGTGGCAGTATTCGGCTTGGAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000565474.1
ENST00000567951.5
ENST00000627032.2
CDS CAA 90 bp ATCTTACCTGTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTaGCATTTGGGATCCATCAATTCACTGTTTTTATTTTGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: ILPVFWVIWRLVIIC*HLGSINSLFLFCFK
Trigger: CTTGAAGCAAAATAAAAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGGTAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CAA 72 bp AGCTCTCACTACACTGTTTTTAATCAGCAATATGACTaGTTAACGAGTACTTCTGGAGGTCCTCAGGAATCT +
Preference number: 6 (lower is better)
Translates to: SSHYTVFNQQYD*LTSTSGGPQES
Trigger: AGATTCCTGAGGACCTCCAGAAGTACTCGTTAACAAGTCATATTGCTGATTAAAAACAGTGTAGTGAGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561481.1
CDS CAA 90 bp GAAGGGAAGAACAAATTTACAGAGAGCTATAATGAAAGAACACCCTaGTTCAACAGAGAAATATGGAACAACGCTTTAGAGTGTCAGGAC +
Preference number: 6 (lower is better)
Translates to: EGKNKFTESYNERTP*FNREIWNNALECQD
Trigger: GTCCTGACACTCTAAAGCGTTGTTCCATATTTCTCTGTTGAACAAGGGTGTTCTTTCATTATAGCTCTCTGTAAATTTGTTCTTCCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561481.1
ENST00000563646.1
CDS CCA 72 bp ATACTCATTCCGGAGCTAAGAGGAACTTCGGGAAAGTaGAATGAAACAACTACAAGCTACATACTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: ILIPELRGTSGK*NETTTSYILLF
Trigger: AAAAAGAAGTATGTAGCTTGTAGTTGTTTCATTCCACTTTCCCGAAGTTCCTCTTAGCTCCGGAATGAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CAA 72 bp ATGACACAGGAAGCTAATGGTCGTATGTTAAAACTTTaGCACAGGACTTCAAGTCTTAACCATCACAGTAGT +
Preference number: 6 (lower is better)
Translates to: MTQEANGRMLKL*HRTSSLNHHSS
Trigger: ACTACTGTGATGGTTAAGACTTGAAGTCCTGTGCAAAAGTTTTAACATACGACCATTAGCTTCCTGTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS CAA 90 bp GTAGATAGCCCCAGAATAAATATAGAACTGCTCCTCCGTTATACTTaGAAAGGCAAATTTTTAAAGACATATTCCCTTTCGGCCTCTGAT +
Preference number: 6 (lower is better)
Translates to: VDSPRINIELLLRYT*KGKFLKTYSLSASD
Trigger: ATCAGAGGCCGAAAGGGAATATGTCTTTAAAAATTTGCCTTTCAAAGTATAACGGAGGAGCAGTTCTATATTTATTCTGGGGCTATCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562090.5
CDS TCA 72 bp TCAAAGAGCAACATGGAAGAATTTGGACAGTCACGCTaGAAAAGCTCATCAGTTTCCTCAAAAAGACTTAAT +
Preference number: 6 (lower is better)
Translates to: SKSNMEEFGQSR*KSSSVSSKRLN
Trigger: ATTAAGTCTTTTTGAGGAAACTGATGAGCTTTTTCAGCGTGACTGTCCAAATTCTTCCATGTTGCTCTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566601.1
CDS TCA 72 bp GTATTTCTTCAAGTCACTTTTACAGGATTTGGCCAATaGATAACTGACTTTATAATCCTGGGCAATCAGCTT +
Preference number: 6 (lower is better)
Translates to: VFLQVTFTGFGQ*ITDFIILGNQL
Trigger: AAGCTGATTGCCCAGGATTATAAAGTCAGTTATTCATTGGCCAAATCCTGTAAAAGTGACTTGAAGAAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000205061.9
ENST00000422840.7
ENST00000447066.6
ENST00000562090.5
ENST00000627032.2