RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLDN (Homo sapiens)

Ensembl gene IDs: ENSG00000186417

Ensembl transcript IDs: ENST00000335449.11, ENST00000396399.6, ENST00000464150.2, ENST00000558286.5, ENST00000558426.5, ENST00000559317.5, ENST00000560215.5, ENST00000560690.5, ENST00000561194.1, ENST00000612989.1

Found 530 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTACGTGCCCCACACCCAGCTCTAGCAGGGTGCCCTCCTGCCCCTaGGCCTGCCCTCATCATGCCCATTGCCGAGGCCTCAGGACTGAA +
Preference number: 1 (lower is better)
Translates to: PTCPTPSSSRVPSCP*ACPHHAHCRGLRTE
Trigger: TTCAGTCCTGAGGCCTCGGCAATGGGCATGATGAGGGCAGGCTCAGGGGCAGGAGGGCACCCTGCTAGAGCTGGGTGTGGGGCACGTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR TCA 90 bp GGGCACATCTCGTGCCTTGGTGCTTCTGGGCCTTTTCTCCAGTGGTaGTGGCCTGCTCATAACAGGGCAAAGGAAGCTCCTCCGAGATGC +
Preference number: 1 (lower is better)
Translates to: GHISCLGASGPFLQW*WPAHNRAKEAPPRC
Trigger: GCATCTCGGAGGAGCTTCCTTTGCCCTGTTATGAGCAGGCCATCACCACTGGAGAAAAGGCCCAGAAGCACCAAGGCACGAGATGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR TCA 90 bp AGAGCCAAGAGGTTGAAAATAAGATGGTGCAGTGGAGTCTCCGGCTaGAAACAACCTCCCTCTGCCCTCAGCAGTGGCTTTGACGGGTGG +
Preference number: 1 (lower is better)
Translates to: RAKRLKIRWCSGVSG*KQPPSALSSGFDGW
Trigger: CCACCCGTCAAAGCCACTGCTGAGGGCAGAGGGAGGTTGTTTTCAGCCGGAGACTCCACTGCACCATCTTATTTTCAACCTCTTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR GCA 90 bp TGCCCTCTGGAACACAAGCAGGTAGGCACTGCCAAGTGTCAGAGGTaGTCGACAATTTTTCCCTCTCCACTGGCCCTTACTTCAATTGCT +
Preference number: 1 (lower is better)
Translates to: CPLEHKQVGTAKCQR*STIFPSPLALTSIA
Trigger: AGCAATTGAAGTAAGGGCCAGTGGAGAGGGAAAAATTGTCGAGCACCTCTGACACTTGGCAGTGCCTACCTGCTTGTGTTCCAGAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR TCA 90 bp TTGCTGCTGTGTAATTCCAATGGTAATTACTGGCCTTCTGAGGATTaGGCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCC +
Preference number: 1 (lower is better)
Translates to: LLLCNSNGNYWPSED*AGLDGVCPFSLKLP
Trigger: GGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGCTCAATCCTCAGAAGGCCAGTAATTACCATTGGAATTACACAGCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR TCA 90 bp AGCAGAAGGGTGCGAGTCAGTTCCCAGGAGACGGCTTCTCCAGTTTaGAATAAACATCTGTCAAGGTGGGACCAAGAAGTATACCCTTGG +
Preference number: 1 (lower is better)
Translates to: SRRVRVSSQETASPV*NKHLSRWDQEVYPW
Trigger: CCAAGGGTATACTTCTTGGTCCCACCTTGACAGATGTTTATTTCAAACTGGAGAAGCCGTCTCCTGGGAACTGACTCGCACCCTTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR GCA 90 bp CAAATGCACTTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATaGGAAGCACATCCTCAAGGCCAGGGATCTGTCTCAAGCCTTTTT +
Preference number: 1 (lower is better)
Translates to: QMHFFFSALPGLQAA*EAHPQGQGSVSSLF
Trigger: AAAAAGGCTTGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAAGTGCATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR CCA 90 bp GCACTGCCAAGTGTCAGAGGTGCTCGACAATTTTTCCCTCTCCACTaGCCCTTACTTCAATTGCTAATGAGAATAAGAGTGGAGGTGACC +
Preference number: 1 (lower is better)
Translates to: ALPSVRGARQFFPLH*PLLQLLMRIRVEVT
Trigger: GGTCACCTCCACTCTTATTCTCATTAGCAATTGAAGTAAGGGCCAGTGGAGAGGGAAAAATTGTCGAGCACCTCTGACACTTGGCAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR TCA 90 bp TCCTCTAGCCAAGAAATGCCTTACCAGGGGCCAACATCAGTTCATTaGTTTTCAACCAAACACAGATTCGCTGGGCAGGAGGAGGCAATA +
Preference number: 1 (lower is better)
Translates to: SSSQEMPYQGPTSVH*FSTKHRFAGQEEAI
Trigger: TATTGCCTCCTCCTGCCCAGCGAATCTGTGTTTGGTTGAAAATCAATGAACTGATGTTGGCCCCTGGTAAGGCATTTCTTGGCTAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR CCA 90 bp CACCCCAGAACTTTTTCTGTCATAGCACCTGTGCTTAACGATACTTaGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCA +
Preference number: 1 (lower is better)
Translates to: HPRTFSVIAPVLNDT*RPEPPTWLQEDTLS
Trigger: TGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGTATCGTTAAGCACAGGTGCTATGACAGAAAAAGTTCTGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR GCA 90 bp CCAGTTCTACATAATAGCCACAAATGGAGCCTCTCTTCTGAACACTaGAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGTCTACTTAC +
Preference number: 1 (lower is better)
Translates to: PVLHNSHKWSLSSEH*KVLPMVPARLTSTY
Trigger: GTAAGTAGACGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCTCCATTTGTGGCTATTATGTAGAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CCA 90 bp ATAGCACCTGTGCTTAACGATACTTGGAGACCAGAACCACCTACTTaGCTTCAGGAGGACACCTTATCAGCTGAAAGAAAATGCCTTGAA +
Preference number: 1 (lower is better)
Translates to: IAPVLNDTWRPEPPT*LQEDTLSAERKCLE
Trigger: TTCAAGGCATTTTCTTTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGTATCGTTAAGCACAGGTGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CCA 90 bp TCCTTCACTTGCCATCAGATGATCATAGCCAAAACGTCCTCTGTGTaGTTGGAAGATGACACCTCACTCATCAAGAATTGTACTGTTTCA +
Preference number: 1 (lower is better)
Translates to: SFTCHQMIIAKTSSV*LEDDTSLIKNCTVS
Trigger: TGAAACAGTACAATTCTTGATGAGTGAGGTGTCATCTTCCAACCACACAGAGGACGTTTTGGCTATGATCATCTGATGGCAAGTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR TCA 90 bp AGTACTTTGATAGTGGATCCACAGGAGAAGCATAAGAAGTCAGAGTaGTCTGAGGATTCAGTGTTCATGATCCACAGCTACAAATCAACA +
Preference number: 1 (lower is better)
Translates to: STLIVDPQEKHKKSE*SEDSVFMIHSYKST
Trigger: TGTTGATTTGTAGCTGTGGATCATGAACACTGAATCCTCAGATCACTCTGACTTCTTATGCTTCTCCTGTGGATCCACTATCAAAGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR GCA 90 bp AACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTaGAGGTTGGAAATTATGGCTCTTAATGCTGTGAAACACAGGGCC +
Preference number: 1 (lower is better)
Translates to: NQKDIHRYSFVVQDL*RLEIMALNAVKHRA
Trigger: GGCCCTGTGTTTCACAGCATTAAGAGCCATAATTTCCAACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR TCA 90 bp GACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAAGCAGGTAGGGGAGACCCTTTGACCTaGGTGCCGGCCACAGGGAGG +
Preference number: 2 (lower is better)
Translates to: DGVCPFSLKLPSGTQAGRGDPLT*VPATGR
Trigger: CCTCCCTGTGGCCGGCACTCAGGTCAAAGGGTCTCC...CCTACCTGCTTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR TCA 90 bp GCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAACCTCAGCAGTGGCTTTaGCGGGTGGCTGAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: AGLDGVCPFSLKLPSGTQPQQWL*RVAESQ
Trigger: CTGGCTCTCAGCCACCCGTCAAAGCCACTGCTGAGG...TTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CCA 90 bp GACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAAGCAGGTAGGCCGGCTCCCCAGGACTaGTGCTCAGAGCCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: DGVCPFSLKLPSGTQAGRPAPQD*CSEPFR
Trigger: TCTGAAGGGCTCTGAGCACCAGTCCTGGGGAGCCGG...CCTACCTGCTTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CCA 90 bp GCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAACCAGCTTTCTTCAGGTaGATCTGCCCTGACCCCGGC +
Preference number: 2 (lower is better)
Translates to: AGLDGVCPFSLKLPSGTQPAFFR*ICPDPG
Trigger: GCCGGGGTCAGGGCAGATCCACCTGAAGAAAGCTGG...TTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR TCA 90 bp TTGCAGGCTGCATGCGAAGCACATCCTCAAGGCCAGGGATCTGTCTCAAGCCTTGGGCAAGGCAGGAGCTaGGCCTCGAAAGAGCATGCA +
Preference number: 2 (lower is better)
Translates to: LQAACEAHPQGQGSVSSLGQGRS*ASKEHA
Trigger: TGCATGCTCTTTCGAGGCTCAGCTCCTGCCTTGCCC...AAGGCTTGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR TCA 90 bp GACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAAGCAGGTAGGCAGGGCCAGTCCAAGTaGGTTTGGGTAGCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: DGVCPFSLKLPSGTQAGRQGQSK*VWVAEP
Trigger: TGGCTCTGCTACCCAAACTCACTTGGACTGGCCCTG...CCTACCTGCTTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR GCA 90 bp GCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAACTTCCACCTCCCATCTaGAGCAGAAGGGTGCGAGTC +
Preference number: 2 (lower is better)
Translates to: AGLDGVCPFSLKLPSGTQLPPPI*SRRVRV
Trigger: GACTCGCACCCTTCTGCTGCAGATGGGAGGTGGAAG...TTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR GCA 90 bp GCAGGCTGCATGCGAAGCACATCCTCAAGGCCAGGGATCTGTCTCAAGCCTTTTCACCCCTTTCCTACGTaGCCCACACCCAGCTCTAGC +
Preference number: 2 (lower is better)
Translates to: AGCMRSTSSRPGICLKPFHPFPT*PTPSSS
Trigger: GCTAGAGCTGGGTGTGGGGCACGTAGGAAAGGGGTG...AAAAGGCTTGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR CAA 90 bp GCCGGCCACAGGGAGGCCAGGATGCTGCCTTTCCACTCAAGCAGTTaGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAGGGGCCAACA +
Preference number: 2 (lower is better)
Translates to: AGHREARMLPFHSSS*SYSSSQEMPYQGPT
Trigger: TGTTGGCCCCTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGGCAGCATCCTGGCCTCCCTGTGGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR TCA 90 bp GGCCTTCGTAGGAGCCTCCTGAGTAGTTTCTTACCCTCTGTCTTTGAGCTCCCAGAAGAGGAGACCCTTTaGCCTGAGTGCCGGCCACAG +
Preference number: 2 (lower is better)
Translates to: GLRRSLLSSFLPSVFELPEEETL*PECRPQ
Trigger: CTGTGGCCGGCACTCAGGTCAAAGGGTCTCCTCTTC...TGGGAGCTCAAAGACAGAGGGTAAGAAACTACTCAGGAGGCTCCTACGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR GCA 90 bp TCTTACCCTCTGTCTTTGAGCTCCCACCACAGCATGTGCCAGCTTTCTTCAGGTGAATCTTCCCCTTTGTaGCCCAGCCTCCTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: SYPLSLSSHHSMCQLSSGESSPL*PSLLPG
Trigger: GCCTGGCAGGAGGCTGGGGCACAAAGGGGAAGATTC...ACCTGAAGAAAGCTGGCACATGCTGTGGTGGGAGCTCAAAGACAGAGGGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCCCTGGTTCCCCTTCCTaGCTGCAGAGCCCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSPGSPS*LQSPRN
Trigger: GTTCCTGGGGCTCTGCAGCCAGGAAGGGGAACCAGG...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CCA 90 bp GCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAAATTCTTACTGCTCCCTaGGCACATCTCGTGCCTTGG +
Preference number: 2 (lower is better)
Translates to: AGLDGVCPFSLKLPSGTQILTAP*AHLVPW
Trigger: CCAAGGCACGAGATGTGCCCAGGGAGCAGTAAGAAT...TTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR TCA 90 bp CGTAGGAGCCTCCTGAGTAGTTTCTTACCCTCTGTCTTTGAGCTCCCACCACAGTTATCCTGTAGCCCCTaGAGAGGAGACCCTTTGACC +
Preference number: 2 (lower is better)
Translates to: RRSLLSSFLPSVFELPPQLSCSP*RGDPLT
Trigger: GGTCAAAGGGTCTCCTCTTCAGGGGCTACAGGATAA...CTGTGGTGGGAGCTCAAAGACAGAGGGTAAGAAACTACTCAGGAGGCTCCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CCA 90 bp GTAATTACTGGCCTTCTGAGGATTGAGCTGGCTTGGACGGTGTGTGCCCGTTTTGTGCCTTGGTGCTTCTaGGCCTTTTCTCCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: VITGLLRIELAWTVCARFVPWCF*AFSPVV
Trigger: CACCACTGGAGAAAAGGCCCAGAAGCACCAAGGCAC...AAAACGGGCACACACCGTCCAAGCCAGCTCAATCCTCAGAAGGCCAGTAATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR GCA 90 bp CTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCAGAGAAAGAGGTAACTTaGAGAGCCAGCTGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: LWGHMLFVAMTRLCCCRAEKEVT*RASCGE
Trigger: CTCCCCACAGCTGGCTCTGCAAGTTACCTCTTTCTC...TGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR GCA 90 bp TTGCAGGCTGCATGCGAAGCACATCCTCAAGGCCAGGGATCTGTCTCAAGCCTTGAAGCTCCTCCGAGATaGCAGCCATATCTTCATAGT +
Preference number: 2 (lower is better)
Translates to: LQAACEAHPQGQGSVSSLEAPPR*QPYLHS
Trigger: ACTATGAAGATATGGCTGGCATCTCGGAGGAGCTTC...AAGGCTTGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR TCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGACCCCTGAAATTTGCTaGAGGGAGCCGAATGCAGCA +
Preference number: 2 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTTPEIC*REPNAA
Trigger: TGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGT...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR TCA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAAGCCGCAGCGCTGGGCTaGAAGATGTTTAAAGAAGTG +
Preference number: 2 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAEAAALG*KMFKEV
Trigger: CACTTCTTTAAACATCTTTCAGCCCAGCGCTGCGGC...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR TCA 90 bp TTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATGCGAAGCACATCCTCAACTTACCCTCTGTCTTTaGGCTCCCACCACAGCATGT +
Preference number: 2 (lower is better)
Translates to: FFFSALPGLQAACEAHPQLTLCL*APTTAC
Trigger: ACATGCTGTGGTGGGAGCTCAAAGACAGAGGGTAAG...TTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CCA 90 bp TCTTACCCTCTGTCTTTGAGCTCCCACCACAGCATGTGCCAGCTTTCTTCAGGTCAAACACAGATTCGCTaGGCAGGAGGAGGCAATAGA +
Preference number: 2 (lower is better)
Translates to: SYPLSLSSHHSMCQLSSGQTQIR*AGGGNR
Trigger: TCTATTGCCTCCTCCTGCCCAGCGAATCTGTGTTTG...ACCTGAAGAAAGCTGGCACATGCTGTGGTGGGAGCTCAAAGACAGAGGGTAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR TCA 90 bp TTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATGCGAAGCACATCCTCAACCGAGGCCTCAGGACTaGATCACATTTTTGGAGTCT +
Preference number: 2 (lower is better)
Translates to: FFFSALPGLQAACEAHPQPRPQD*ITFLES
Trigger: AGACTCCAAAAATGTGATTCAGTCCTGAGGCCTCGG...TTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR GCA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAACTGAACACTGCAAAGTaGTTCCCATGGTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAELNTAK*FPWFQP
Trigger: TGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAG...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR GCA 90 bp GGCCTTCGTAGGAGCCTCCTGAGTAGTTTCTTACCCTCTGTCTTTGAGCTCCCAACCGGCCTTAAACTGTaGAGAGATGAAACACCTTAC +
Preference number: 2 (lower is better)
Translates to: GLRRSLLSSFLPSVFELPTGLKL*RDETPY
Trigger: GTAAGGTGTTTCATCTCTGCACAGTTTAAGGCCGGT...TGGGAGCTCAAAGACAGAGGGTAAGAAACTACTCAGGAGGCTCCTACGAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCAACTGGATTCTCTCCTaGCATCCAAGGGGACCAGAT +
Preference number: 2 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSNWILS*HPRGPD
Trigger: ATCTGGTCCCCTTGGATGCCAGGAGAGAATCCAGTT...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR TCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCCAACAAACAAGTCATTaGCAGCTGCCTGGGGACTTT +
Preference number: 2 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSQQTSH*QLPGDF
Trigger: AAAGTCCCCAGGCAGCTGTCAATGACTTGTTTGTTG...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCAAACAAGTTTCCTGTTaGGGGAGAACTGGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSKQVSC*GRTGPR
Trigger: TCTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTT...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CCA 90 bp CTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCAGTAATGGTTATTCTGTaGTGGCAGGTGCAGATGCAA +
Preference number: 2 (lower is better)
Translates to: LWGHMLFVAMTRLCCCRAVMVIL*WQVQMQ
Trigger: TTGCATCTGCACCTGCCACCACAGAATAACCATTAC...TGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR TCA 90 bp ACTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCCATAAGAAGTCAGAGTaGTCTGAGGATTCAGTGTTC +
Preference number: 2 (lower is better)
Translates to: TVGPYALCCNDSTLLLQSHKKSE*SEDSVF
Trigger: GAACACTGAATCCTCAGATCACTCTGACTTCTTATG...GCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR GCA 90 bp CATTGCTGCTGTGTAATTCCAATGGTAATTACTGGCCTTCTGAGGATTGAGCTGCATCTCGTGCCTTGGTaGTTCTGGGCCTTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: HCCCVIPMVITGLLRIELHLVPW*FWAFSP
Trigger: TGGAGAAAAGGCCCAGAAGCACCAAGGCACGAGATG...CAGCTCAATCCTCAGAAGGCCAGTAATTACCATTGGAATTACACAGCAGCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGGTAATGGTTATTCTGTaGTGGCAGGTGCAGATGCAA +
Preference number: 2 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTVMVIL*WQVQMQ
Trigger: TTGCATCTGCACCTGCCACCACAGAATAACCATTAC...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CCA 90 bp GCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAAGGAGTAATTGCTGTCTaGAAGAATTTTCTACCATTT +
Preference number: 2 (lower is better)
Translates to: AGLDGVCPFSLKLPSGTQGVIAV*KNFLPF
Trigger: AAATGGTAGAAAATTCTTCCAGACAGCAATTACTCC...TTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR CAA 90 bp GAATTTTCTACCATTTCTTCTCGTCCAGGGCCAGTCCAAGTGAGTTaGGGTAGCAGAGCCAAGAGGTTGAAAATAAGATGGTGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: EFSTISSRPGPVQVS*GSRAKRLKIRWCSG
Trigger: TCCACTGCACCATCTTATTTTCAACCTCTTGGCTCTGCTACCCAAACTCACTTGGACTGGCCCTGGACGAGAAGAAATGGTAGAAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR TCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTAACCCCTGAAATTTGCTaGAGGGAGCCGAATGCAGCA +
Preference number: 2 (lower is better)
Translates to: TQATGLINSKVNLVSMWLTPEIC*REPNAA
Trigger: TGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGT...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
3UTR-3UTR TCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGGTCCCAGAAAACCCCTaGAATTTGCTGAAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKVPENP*NLLKGA
Trigger: GGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGAC...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
3UTR-3UTR TCA 90 bp TATTTATTTATCTTATTTATTATCCGTCTCTCCCAGCTAGGATGTAAGCCTCGTGCTTTGACGGGTGGCTaGGAGCCAGGCCTTCGTAGG +
Preference number: 2 (lower is better)
Translates to: YLFILFIIRLSQLGCKPRALTGG*EPGLRR
Trigger: CCTACGAAGGCCTGGCTCTCAGCCACCCGTCAAAGC...ACGAGGCTTACATCCTAGCTGGGAGAGACGGATAATAAATAAGATAAATAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR TCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACACCCCTGAAATTTGCTaGAGGGAGCCGAATGCAGCA +
Preference number: 2 (lower is better)
Translates to: IKVVRRAATKNHQITYRYTPEIC*REPNAA
Trigger: TGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGT...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
3UTR-3UTR TCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCAGGATTCAGTGTTCATaGTCCACAGCTACAAATCAA +
Preference number: 2 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSRIQCS*STATNQ
Trigger: TTGATTTGTAGCTGTGGATCATGAACACTGAATCCT...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CAA 90 bp GCTGAAAGAAAATGCCTTGAAATAGAGTGTGGCCTAGCTTTGAGGTaGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTAC +
Preference number: 2 (lower is better)
Translates to: AERKCLEIECGLALR*GGMVLFTFQWEAIY
Trigger: GTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCACACTCTATTTCAAGGCATTTTCTTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR TCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTGTCCCAGAAAACCCCTaGAATTTGCTGAAGGGAGCC +
Preference number: 2 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFVPENP*NLLKGA
Trigger: GGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGAC...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR TCA 90 bp TTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATGCGAAGCACATCCTCAACCAACATCAGTTCATTaGTTTTCAACCAAACACAGA +
Preference number: 2 (lower is better)
Translates to: FFFSALPGLQAACEAHPQPTSVH*FSTKHR
Trigger: TCTGTGTTTGGTTGAAAATCAATGAACTGATGTTGG...TTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAAACAAGTTTCCTGTTaGGGGAGAACTGGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQKQVSC*GRTGPR
Trigger: TCTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTT...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
3UTR-3UTR GCA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGACCATATGCTCTTTGTTaGAATGACTCGACTCTGCTG +
Preference number: 2 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRPYALC*NDSTLL
Trigger: CAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGG...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR GCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTCAAGTCATTGACAGCTaGCTGGGGACTTTCAGGGGA +
Preference number: 2 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGQVIDS*LGTFRG
Trigger: TCCCCTGAAAGTCCCCAGGCAGCTGTCAATGACTTG...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATAAACAAGTTTCCTGTTaGGGGAGAACTGGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNKQVSC*GRTGPR
Trigger: TCTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTT...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
3UTR-3UTR CCA 90 bp ATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATTTGCAGAGCCAGCTGTaGGGAGATCACCAAATCTCA +
Preference number: 2 (lower is better)
Translates to: IHYSSHWTYQLKGKFGQHLQSQL*GDHQIS
Trigger: TGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAA...ATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CCA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGAATGGTTATTCTGTGGTaGCAGGTGCAGATGCAAAGA +
Preference number: 2 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRMVILW*QVQMQR
Trigger: TCTTTGCATCTGCACCTGCCACCACAGAATAACCAT...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CCA 90 bp CATTGCTGCTGTGTAATTCCAATGGTAATTACTGGCCTTCTGAGGATTGAGCTGAAACATCTGTCAAGGTaGGACCAAGAAGTATACCCT +
Preference number: 2 (lower is better)
Translates to: HCCCVIPMVITGLLRIELKHLSR*DQEVYP
Trigger: AGGGTATACTTCTTGGTCCCACCTTGACAGATGTTT...CAGCTCAATCCTCAGAAGGCCAGTAATTACCATTGGAATTACACAGCAGCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTAAACAGGCAATGGACTaGCTCTGGCCCAGTTCTACA +
Preference number: 2 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGKQAMD*LWPSST
Trigger: TGTAGAACTGGGCCAGAGCCAGTCCATTGCCTGTTT...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTTGCCTCCAAAGTAGCTaGGATTGCAGTTATGTGCCA +
Preference number: 2 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFCLQSS*DCSYVP
Trigger: TGGCACATAACTGCAATCCCAGCTACTTTGGAGGCA...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CCA 90 bp CTAGAATGGTACCTGCCACACAAATATGTGCTCCATAAACAAATGCACTTTTTCCAAGAAGTATACCCTTaGTATCCCGGAACGCAATGG +
Preference number: 2 (lower is better)
Translates to: LEWYLPHKYVLHKQMHFFQEVYP*YPGTQW
Trigger: CCATTGCGTTCCGGGATACCAAGGGTATACTTCTTG...GAAAAAGTGCATTTGTTTATGGAGCACATATTTGTGTGGCAGGTACCATTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR CAA 90 bp TTCACTTGCCATCAGATGATCATAGCCAAAACGTCCTCTGTGTGGTaGGAAGATGACACCTCACTCATCAAGAATTGTACTGTTTCATTT +
Preference number: 2 (lower is better)
Translates to: FTCHQMIIAKTSSVW*EDDTSLIKNCTVSF
Trigger: AAATGAAACAGTACAATTCTTGATGAGTGAGGTGTCATCTTCCAACCACACAGAGGACGTTTTGGCTATGATCATCTGATGGCAAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CAA 90 bp AAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTaGGAAATTATGGCTCTTAATGCTGTGAAACACAGGGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: KDIHRYSFVVQDLCR*EIMALNAVKHRATA
Trigger: TGCTGTGGCCCTGTGTTTCACAGCATTAAGAGCCATAATTTCCAACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR TCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCTACTGCATAAACAAATaGGTGTGGCTGTGCTCAGTA +
Preference number: 2 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSYCINK*VWLCSV
Trigger: TACTGAGCACAGCCACACTCATTTGTTTATGCAGTA...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR TCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTCATAAGAAGTCAGAGTaGTCTGAGGATTCAGTGTTC +
Preference number: 2 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGHKKSE*SEDSVF
Trigger: GAACACTGAATCCTCAGATCACTCTGACTTCTTATG...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CAA 90 bp AGAATGAATTTGGTCCCAAAGAGAAAGTTTCAGAATACACACAAATaGGGACAAGTTGCTGAAAAATCTTTACATAAGATTTGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: RMNLVPKRKFQNTHK*GQVAEKSLHKICPG
Trigger: ACCAGGGCAAATCTTATGTAAAGATTTTTCAGCAACTTGTCCCAATTTGTGTGTATTCTGAAACTTTCTCTTTGGGACCAAATTCATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CAA 90 bp ACTGCTGTTAATAATATATTGAACTCAGGGCCATTGAGAATGAATTaGGTCCCAAAGAGAAAGTTTCAGAATACACACAAATTGGGACAA +
Preference number: 2 (lower is better)
Translates to: TAVNNILNSGPLRMN*VPKRKFQNTHKLGQ
Trigger: TTGTCCCAATTTGTGTGTATTCTGAAACTTTCTCTTTGGGACCAAATTCATTCTCAATGGCCCTGAGTTCAATATATTATTAACAGCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR TCA 72 bp CTGAAAACAACCTCCCTCTGCCCTCAGCAGTGGCTTTaGCGGGTGGCTGAGAGCCAGGCCTTCGTAGGAGCC +
Preference number: 3 (lower is better)
Translates to: LKTTSLCPQQWL*RVAESQAFVGA
Trigger: GGCTCCTACGAAGGCCTGGCTCTCAGCCACCCGTCAAAGCCACTGCTGAGGGCAGAGGGAGGTTGTTTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR TCA 72 bp CGGGTGGCTGAGAGCCAGGCCTTCGTAGGAGCCTCCTaGGTAGTTTCTTACCCTCTGTCTTTGAGCTCCCAC +
Preference number: 3 (lower is better)
Translates to: RVAESQAFVGAS*VVSYPLSLSSH
Trigger: GTGGGAGCTCAAAGACAGAGGGTAAGAAACTACTCAGGAGGCTCCTACGAAGGCCTGGCTCTCAGCCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR GCA 72 bp TCTTACCCTCTGTCTTTGAGCTCCCACCACAGCATGTaGCAGCTTTCTTCAGGTGGATCTGCCCTGACCCCG +
Preference number: 3 (lower is better)
Translates to: SYPLSLSSHHSM*QLSSGGSALTP
Trigger: CGGGGTCAGGGCAGATCCACCTGAAGAAAGCTGGCACATGCTGTGGTGGGAGCTCAAAGACAGAGGGTAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR TCA 72 bp TCGTGCCTTGGTGCTTCTGGGCCTTTTCTCCAGTGGTaGTGGCCTGCTCATAACAGGGCAAAGGAAGCTCCT +
Preference number: 3 (lower is better)
Translates to: SCLGASGPFLQW*WPAHNRAKEAP
Trigger: AGGAGCTTCCTTTGCCCTGTTATGAGCAGGCCATCACCACTGGAGAAAAGGCCCAGAAGCACCAAGGCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CAA 90 bp TCTTACCCTCTGTCTTTGAGCTCCCACCACAGCATGTGCCAGCTTTCTTCAGGTTCAGAATCTTCCCCTTaGTGCCCCAGCCTCCTGCCA +
Preference number: 3 (lower is better)
Translates to: SYPLSLSSHHSMCQLSSGSESSP*CPSLLP
Trigger: TGGCAGGAGGCTGGGGCACAAAGGGGAAGATTCTGA...ACCTGAAGAAAGCTGGCACATGCTGTGGTGGGAGCTCAAAGACAGAGGGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR GCA 72 bp CTGAAGCTGCCCTCTGGAACACAAGCAGGTAGGCACTaGCAAGTGTCAGAGGTGCTCGACAATTTTTCCCTC +
Preference number: 3 (lower is better)
Translates to: LKLPSGTQAGRH*QVSEVLDNFSL
Trigger: GAGGGAAAAATTGTCGAGCACCTCTGACACTTGGCAGTGCCTACCTGCTTGTGTTCCAGAGGGCAGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR GCA 72 bp GCACTTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTaGATGCGAAGCACATCCTCAAGGCCAGGGATCTGT +
Preference number: 3 (lower is better)
Translates to: ALFLFCTPWVAG*MRSTSSRPGIC
Trigger: ACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR GCA 72 bp TTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATaGGAAGCACATCCTCAAGGCCAGGGATCTGTCTCA +
Preference number: 3 (lower is better)
Translates to: FFFSALPGLQAA*EAHPQGQGSVS
Trigger: TGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR GCA 72 bp ATGGGGAAACTAAGGCCCAAGGAGAAAGAGGTAACTTaGAGAGCCAGCTGTGGGGAGATCACCAAATCTCAG +
Preference number: 3 (lower is better)
Translates to: MGKLRPKEKEVT*RASCGEITKSQ
Trigger: CTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGTTACCTCTTTCTCCTTGGGCCTTAGTTTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR GCA 72 bp CCTGCTCATAACAGGGCAAAGGAAGCTCCTCCGAGATaGCAGCCATATCTTCATAGTTATCCTGTAGCCCCT +
Preference number: 3 (lower is better)
Translates to: PAHNRAKEAPPR*QPYLHSYPVAP
Trigger: AGGGGCTACAGGATAACTATGAAGATATGGCTGGCATCTCGGAGGAGCTTCCTTTGCCCTGTTATGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR CCA 72 bp GCCCAAGGAGAAAGAGGTAACTTGCAGAGCCAGCTGTaGGGAGATCACCAAATCTCAGCCATTTCAACTTCC +
Preference number: 3 (lower is better)
Translates to: AQGERGNLQSQL*GDHQISAISTS
Trigger: GGAAGTTGAAATGGCTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGTTACCTCTTTCTCCTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CAA 90 bp GGGTGCGAGTCAGTTCCCAGGAGACGGCTTCTCCAGTTTGAAATAAACATCTGTCCAAGAAGTATACCCTaGGTATCCCGGAACGCAATG +
Preference number: 3 (lower is better)
Translates to: GCESVPRRRLLQFEINICPRSIP*VSRNAM
Trigger: CATTGCGTTCCGGGATACCAAGGGTATACTTCTTGG...ACAGATGTTTATTTCAAACTGGAGAAGCCGTCTCCTGGGAACTGACTCGCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CAA 90 bp CATTGCTGCTGTGTAATTCCAATGGTAATTACTGGCCTTCTGAGGATTGAGCTGGGCACATCTCGTGCCTaGGTGCTTCTGGGCCTTTTC +
Preference number: 3 (lower is better)
Translates to: HCCCVIPMVITGLLRIELGTSRA*VLLGLF
Trigger: GAAAAGGCCCAGAAGCACCAAGGCACGAGATGTGCC...CAGCTCAATCCTCAGAAGGCCAGTAATTACCATTGGAATTACACAGCAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR GCA 72 bp TGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTaGTGTTGCAGAGCAAAAGCAATGTCAGGCCGTACT +
Preference number: 3 (lower is better)
Translates to: WGHMLFVAMTRL*CCRAKAMSGRT
Trigger: AGTACGGCCTGACATTGCTTTTGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR TCA 72 bp TGTAATTCCAATGGTAATTACTGGCCTTCTGAGGATTaGGCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTG +
Preference number: 3 (lower is better)
Translates to: CNSNGNYWPSED*AGLDGVCPFSL
Trigger: CAGAGAAAACGGGCACACACCGTCCAAGCCAGCTCAATCCTCAGAAGGCCAGTAATTACCATTGGAATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR TCA 72 bp CAAGAAATGCCTTACCAGGGGCCAACATCAGTTCATTaGTTTTCAACCAAACACAGATTCGCTGGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: QEMPYQGPTSVH*FSTKHRFAGQE
Trigger: CTCCTGCCCAGCGAATCTGTGTTTGGTTGAAAATCAATGAACTGATGTTGGCCCCTGGTAAGGCATTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR GCA 72 bp CATAATAGCCACAAATGGAGCCTCTCTTCTGAACACTaGAAAGTGCTTCCCATGGTTCCAGCCAGATTAACG +
Preference number: 3 (lower is better)
Translates to: HNSHKWSLSSEH*KVLPMVPARLT
Trigger: CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCTCCATTTGTGGCTATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CCA 72 bp ACTTTTTCTGTCATAGCACCTGTGCTTAACGATACTTaGAGACCAGAACCACCTACTTGGCTTCAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: TFSVIAPVLNDT*RPEPPTWLQED
Trigger: GTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGTATCGTTAAGCACAGGTGCTATGACAGAAAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CCA 72 bp AAACATCTGTCAAGGTGGGACCAAGAAGTATACCCTTaGTATCCCGGAACGCAATGGCTTCTAGGTAAGAGT +
Preference number: 3 (lower is better)
Translates to: KHLSRWDQEVYP*YPGTQWLLGKS
Trigger: ACTCTTACCTAGAAGCCATTGCGTTCCGGGATACCAAGGGTATACTTCTTGGTCCCACCTTGACAGATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR-3UTR CAA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTAGCTGTCCCTGGCTTTaGCTAATCTCAGAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFSCPWL*LISELP
Trigger: GGGCAGCTCTGAGATTAGCAAAAGCCAGGGACAGCT...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CCA 72 bp GTGCTTAACGATACTTGGAGACCAGAACCACCTACTTaGCTTCAGGAGGACACCTTATCAGCTGAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: VLNDTWRPEPPT*LQEDTLSAERK
Trigger: TTTTCTTTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGTATCGTTAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CAA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATAAAACAAGTTTCCTGTaGGGGGAGAACTGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNKTSFL*GENWSQ
Trigger: CTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTTT...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
3UTR-3UTR CAA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCCAGAATACACACAAATaGGGACAAGTTGCTGAAAAA +
Preference number: 3 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSQNTHK*GQVAEK
Trigger: TTTTTCAGCAACTTGTCCCAATTTGTGTGTATTCTG...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR TCA 72 bp ATAGTGGATCCACAGGAGAAGCATAAGAAGTCAGAGTaGTCTGAGGATTCAGTGTTCATGATCCACAGCTAC +
Preference number: 3 (lower is better)
Translates to: IVDPQEKHKKSE*SEDSVFMIHSY
Trigger: GTAGCTGTGGATCATGAACACTGAATCCTCAGATCACTCTGACTTCTTATGCTTCTCCTGTGGATCCACTAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CCA 72 bp TATGCATATTTAAGAGCATTTAGGAGCAAGTTCAACTaGATTCTCTCCTGGCATCCAAGGGGACCAGATCAC +
Preference number: 3 (lower is better)
Translates to: YAYLRAFRSKFN*ILSWHPRGPDH
Trigger: GTGATCTGGTCCCCTTGGATGCCAGGAGAGAATCCAGTTGAACTTGCTCCTAAATGCTCTTAAATATGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CCA 72 bp ATTGAGAACACAACAAACAAGTCATTGACAGCTGCCTaGGGACTTTCAGGGGAGCAGGGAGATTTGAATATT +
Preference number: 3 (lower is better)
Translates to: IENTTNKSLTAA*GLSGEQGDLNI
Trigger: AATATTCAAATCTCCCTGCTCCCCTGAAAGTCCCCAGGCAGCTGTCAATGACTTGTTTGTTGTGTTCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CAA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTAAAACAAGTTTCCTGTaGGGGGAGAACTGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFKTSFL*GENWSQ
Trigger: CTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTTT...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CAA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTGGCCTAGCTTTGAGGTaGGGAGGGATGGTTTTGTTT +
Preference number: 3 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFGLALR*GGMVLF
Trigger: AAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCC...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CAA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTAAAACAAGTTTCCTGTaGGGGGAGAACTGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGKTSFL*GENWSQ
Trigger: CTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTTT...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR TCA 72 bp GATCATAGCCAAAACGTCCTCTGTGTGGTTGGAAGATaGCACCTCACTCATCAAGAATTGTACTGTTTCATT +
Preference number: 3 (lower is better)
Translates to: DHSQNVLCVVGR*HLTHQELYCFI
Trigger: AATGAAACAGTACAATTCTTGATGAGTGAGGTGTCATCTTCCAACCACACAGAGGACGTTTTGGCTATGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CAA 90 bp CTAGAATGGTACCTGCCACACAAATATGTGCTCCATAAACAAATGCACTTTTTCTTCCACTCAAGCAGTTaGAGCTATTCCTCTAGCCAA +
Preference number: 3 (lower is better)
Translates to: LEWYLPHKYVLHKQMHFFFHSSS*SYSSSQ
Trigger: TTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAA...GAAAAAGTGCATTTGTTTATGGAGCACATATTTGTGTGGCAGGTACCATTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR TCA 72 bp AGCAAAAGCAATGTCAGGCCGTACTGCATAAACAAATaGGTGTGGCTGTGCTCAGTAAAACCTTATTTAAAA +
Preference number: 3 (lower is better)
Translates to: SKSNVRPYCINK*VWLCSVKPYLK
Trigger: TTTTAAATAAGGTTTTACTGAGCACAGCCACACTCATTTGTTTATGCAGTACGGCCTGACATTGCTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR GCA 72 bp GACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTaGAGGTTGGAAATTATGGCTCTTAATGCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: DIHRYSFVVQDL*RLEIMALNAVK
Trigger: TTTCACAGCATTAAGAGCCATAATTTCCAACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR-3UTR CAA 90 bp TATTTATTTATCTTATTTATTATCCGTCTCTCCCAGCTAGGATGTAAGCCTCGTTATATGAACGATCCATaGCTGCTGTGTAATTCCAAT +
Preference number: 3 (lower is better)
Translates to: YLFILFIIRLSQLGCKPRYMNDP*LLCNSN
Trigger: ATTGGAATTACACAGCAGCAATGGATCGTTCATATA...ACGAGGCTTACATCCTAGCTGGGAGAGACGGATAATAAATAAGATAAATAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp CATGCACCAGCACCAGCTGTCACACGGCCCACAGAATGCCCCTCCCAGGGCTGTGCTTTGACGGGTGGCTaGGAGCCAGGCCTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: HAPAPAVTRPTECPSQGCALTGG*EPGLRR
Trigger: CCTACGAAGGCCTGGCTCTCAGCCACCCGTCAAAGC...ACAGCCCTGGGAGGGGCATTCTGTGGGCCGTGTGACAGCTGGTGCTGGTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp CATGCACCAGCACCAGCTGTCACACGGCCCACAGAATGCCCCTCCCAGGGCTGTTCTCCTTTTGGGCCCTaGGGACCAGGCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: HAPAPAVTRPTECPSQGCSPFGP*GPGCPS
Trigger: GGATGGACAGCCTGGTCCTCAGGGCCCAAAAGGAGA...ACAGCCCTGGGAGGGGCATTCTGTGGGCCGTGTGACAGCTGGTGCTGGTGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp TTGCAGGCTGCATGCGAAGCACATCCTCAAGGCCAGGGATCTGTCTCAAGCCTTGAGCTGGCCGGGTCTTaGGGTGGTGCGGACGCCCCG +
Preference number: 4 (lower is better)
Translates to: LQAACEAHPQGQGSVSSLELAGS*GGADAP
Trigger: CGGGGCGTCCGCACCACCCCAAGACCCGGCCAGCTC...AAGGCTTGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp CGTAGGAGCCTCCTGAGTAGTTTCTTACCCTCTGTCTTTGAGCTCCCACCACAGCTCTCGGCGCGGATATaGGGCGCGGGCTCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RRSLLSSFLPSVFELPPQLSARI*GAGSPL
Trigger: CAGCGGCGAGCCCGCGCCGCATATCCGCGCCGAGAG...CTGTGGTGGGAGCTCAAAGACAGAGGGTAAGAAACTACTCAGGAGGCTCCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp CTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCACCGTGCCCGCAGCGTTaGGCGCCGAGAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: LWGHMLFVAMTRLCCCRAPCPQR*APRAAP
Trigger: TGGCGCTGCTCTCGGCGCTCAACGCTGCGGGCACGG...TGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR TCA 90 bp AGCTCCCACCACAGCATGTGCCAGCTTTCTTCAGGTGGATCTGCCCTGACCCCGCAGGGCCAGTCCAAGTaGGTTTGGGTAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSHHSMCQLSSGGSALTPQGQSK*VWVAEP
Trigger: TGGCTCTGCTACCCAAACTCACTTGGACTGGCCCTG...CGGGGTCAGGGCAGATCCACCTGAAGAAAGCTGGCACATGCTGTGGTGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp CGTAGGAGCCTCCTGAGTAGTTTCTTACCCTCTGTCTTTGAGCTCCCACCACAGGCGGGCTCGCCGCTGTaGCTGCGCTTGTTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: RRSLLSSFLPSVFELPPQAGSPL*LRLLRA
Trigger: AGCTCGCAACAAGCGCAGCCACAGCGGCGAGCCCGC...CTGTGGTGGGAGCTCAAAGACAGAGGGTAAGAAACTACTCAGGAGGCTCCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp CATGCACCAGCACCAGCTGTCACACGGCCCACAGAATGCCCCTCCCAGGGCTGTGCACATCTCGTGCCTTaGTGCTTCTGGGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HAPAPAVTRPTECPSQGCAHLVP*CFWAFS
Trigger: AGAAAAGGCCCAGAAGCACCAAGGCACGAGATGTGC...ACAGCCCTGGGAGGGGCATTCTGTGGGCCGTGTGACAGCTGGTGCTGGTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp CTCCTTCCACCTCCCATCTGCAGCAGAAGGGTGCGAGTCAGTTCCCAGGAGACGGTGCCTTGGTGCTTCTaGGCCTTTTCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLPPPICSRRVRVSSQETVPWCF*AFSPVV
Trigger: CACCACTGGAGAAAAGGCCCAGAAGCACCAAGGCAC...CGTCTCCTGGGAACTGACTCGCACCCTTCTGCTGCAGATGGGAGGTGGAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp CGTAGGAGCCTCCTGAGTAGTTTCTTACCCTCTGTCTTTGAGCTCCCACCACAGCCCTGCACCAGCCCCTaGTTCTTACTGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRSLLSSFLPSVFELPPQPCTSP*FLLLPG
Trigger: CCCAGGGAGCAGTAAGAATCAGGGGCTGGTGCAGGG...CTGTGGTGGGAGCTCAAAGACAGAGGGTAAGAAACTACTCAGGAGGCTCCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp CATGCACCAGCACCAGCTGTCACACGGCCCACAGAATGCCCCTCCCAGGGCTGTGCCAAGTGTCAGAGGTaGTCGACAATTTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HAPAPAVTRPTECPSQGCAKCQR*STIFPS
Trigger: AGAGGGAAAAATTGTCGAGCACCTCTGACACTTGGC...ACAGCCCTGGGAGGGGCATTCTGTGGGCCGTGTGACAGCTGGTGCTGGTGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp ACTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCCCCAGGTGGACCGGGTaGGCCTTGGTCACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: TVGPYALCCNDSTLLLQSPRWTG*ALVTFG
Trigger: GCCAAAGGTGACCAAGGCCCACCCGGTCCACCTGGG...GCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCCAGCGCCTCGGGCCATaGTCTATGCGCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSQRLGP*SMRLGQ
Trigger: CTGCCCAAGGCGCATAGAGCATGGCCCGAGGCGCTG...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR GCA 90 bp CTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCAGGCCTTTGGCTCTTCTaGTTCCAGGGGGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LWGHMLFVAMTRLCCCRAGLWLF*FQGALE
Trigger: CTCCAGGGCCCCCTGGAAGCAGAAGAGCCAAAGGCC...TGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACGGCTCCCGGAGGTCCTaGTGGTCCAGAAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHGSRRS*WSRRSC
Trigger: ACAGGACCTTCTGGACCACCAGGACCTCCGGGAGCC...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCCCTCTCTATTCGCAGTaGCCCTTCCCGGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSPLYSQ*PFPGPQ
Trigger: CTGCGGCCCCGGGAAGGGCCACTGCGAATAGAGAGG...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp ACCTTACCCCTGCTGCACACAGTTTTAGTCGACCCAAATGCAATCATGGAGATAGCGCTTGTTGCGAGCTaGGCTGGCCGGGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TLPLLHTVLVDPNAIMEIALVAS*AGRVLG
Trigger: CCCCAAGACCCGGCCAGCTCAGCTCGCAACAAGCGC...TATCTCCATGATTGCATTTGGGTCGACTAAAACTGTGTGCAGCAGGGGTAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCCTGGGCACTGGCCGTTaGACATGCTTGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSLGTGR*TCLAAE
Trigger: CTCGGCAGCCAAGCATGTTCAACGGCCAGTGCCCAG...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACGGATTCCTCGGGCAATaGAGGCGTTGCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHGFLGQ*RRCQPW
Trigger: CCAAGGCTGGCAACGCCTTCATTGCCCGAGGAATCC...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp GCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAATTATCCTGTAGCCCCTaGAGAGGAGACCCTTTGACC +
Preference number: 4 (lower is better)
Translates to: AGLDGVCPFSLKLPSGTQLSCSP*RGDPLT
Trigger: GGTCAAAGGGTCTCCTCTTCAGGGGCTACAGGATAA...TTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp GCAAAGGAAGCTCCTCCGAGATGCCAGCCATATCTTCATAGTTATCCTGTAGCCCCTCAGCAGTGGCTTTaGCGGGTGGCTGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AKEAPPRCQPYLHSYPVAPQQWL*RVAESQ
Trigger: CTGGCTCTCAGCCACCCGTCAAAGCCACTGCTGAGG...GGCTACAGGATAACTATGAAGATATGGCTGGCATCTCGGAGGAGCTTCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCTCTCGGCGCGGATATaGGGCGCGGGCTCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQLSARI*GAGSPL
Trigger: CAGCGGCGAGCCCGCGCCGCATATCCGCGCCGAGAG...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR GCA 90 bp ACTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCGGGCCCTCATTTCCCTaGAGGCCCAGTTCACCATGG +
Preference number: 4 (lower is better)
Translates to: TVGPYALCCNDSTLLLQSGPSFP*RPSSPW
Trigger: CCATGGTGAACTGGGCCTGCAGGGAAATGAGGGCCC...GCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp GCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAATCCCACCACAGCATGTaGCAGCTTTCTTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AGLDGVCPFSLKLPSGTQSHHSM*QLSSGG
Trigger: TCCACCTGAAGAAAGCTGGCACATGCTGTGGTGGGA...TTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp GTAATTACTGGCCTTCTGAGGATTGAGCTGGCTTGGACGGTGTGTGCCCGTTTTTCCCGGAGGTCCTGGTaGTCCAGAAGGTCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VITGLLRIELAWTVCARFSRRSW*SRRSCE
Trigger: CTCACAGGACCTTCTGGACCACCAGGACCTCCGGGA...AAAACGGGCACACACCGTCCAAGCCAGCTCAATCCTCAGAAGGCCAGTAATTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGGGCTCCCGGAGGTCCTaGTGGTCCAGAAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTGSRRS*WSRRSC
Trigger: ACAGGACCTTCTGGACCACCAGGACCTCCGGGAGCC...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp GGGTGCGAGTCAGTTCCCAGGAGACGGCTTCTCCAGTTTGAAATAAACATCTGTCCGGCTCCCCAGGACTaGTGCTCAGAGCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GCESVPRRRLLQFEINICPAPQD*CSEPFR
Trigger: TCTGAAGGGCTCTGAGCACCAGTCCTGGGGAGCCGG...ACAGATGTTTATTTCAAACTGGAGAAGCCGTCTCCTGGGAACTGACTCGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAAGTCCAGAAGGTCCTGTaGGGCAGATGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAEVQKVL*GRCPWC
Trigger: GCACCAAGGGCATCTGCCTCACAGGACCTTCTGGAC...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTCTCCTTTTGGGCCCTaGGGACCAGGCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSSPFGP*GPGCPS
Trigger: GGATGGACAGCCTGGTCCTCAGGGCCCAAAAGGAGA...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp GGGTGCGAGTCAGTTCCCAGGAGACGGCTTCTCCAGTTTGAAATAAACATCTGTGGGCAAGGCAGGAGCTaGGCCTCGAAAGAGCATGCA +
Preference number: 4 (lower is better)
Translates to: GCESVPRRRLLQFEINICGQGRS*ASKEHA
Trigger: TGCATGCTCTTTCGAGGCTCAGCTCCTGCCTTGCCC...ACAGATGTTTATTTCAAACTGGAGAAGCCGTCTCCTGGGAACTGACTCGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp ACCTTACCCCTGCTGCACACAGTTTTAGTCGACCCAAATGCAATCATGGAGATAGGAGACCCTTTGACCTaGGTGCCGGCCACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TLPLLHTVLVDPNAIMEIGDPLT*VPATGR
Trigger: CCTCCCTGTGGCCGGCACTCAGGTCAAAGGGTCTCC...TATCTCCATGATTGCATTTGGGTCGACTAAAACTGTGTGCAGCAGGGGTAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp TTGATTTTCAACCAAACACAGATTCGCTGGGCAGGAGGAGGCAATAGAGGGCAATGTGGCTGCGCTTGTTaGGAGCTGAGCTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LIFNQTQIRWAGGGNRGQCGCAC*ELSWPG
Trigger: ACCCGGCCAGCTCAGCTCGCAACAAGCGCAGCCACA...TTGCCCTCTATTGCCTCCTCCTGCCCAGCGAATCTGTGTTTGGTTGAAAATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp TTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATGCGAAGCACATCCTCAAAGCCTGCCCTCATCATaGCCATTGCCGAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FFFSALPGLQAACEAHPQSLPSS*PLPRPQ
Trigger: CTGAGGCCTCGGCAATGGGCATGATGAGGGCAGGCT...TTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp GCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAACAAACACAGATTCGCTaGGCAGGAGGAGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: AGLDGVCPFSLKLPSGTQQTQIR*AGGGNR
Trigger: TCTATTGCCTCCTCCTGCCCAGCGAATCTGTGTTTG...TTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp TTGCAGGCTGCATGCGAAGCACATCCTCAAGGCCAGGGATCTGTCTCAAGCCTTATTCTTACTGCTCCCTaGGCACATCTCGTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LQAACEAHPQGQGSVSSLILTAP*AHLVPW
Trigger: CCAAGGCACGAGATGTGCCCAGGGAGCAGTAAGAAT...AAGGCTTGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp GGCCTTCGTAGGAGCCTCCTGAGTAGTTTCTTACCCTCTGTCTTTGAGCTCCCACTTACCCTCTGTCTTTaGGCTCCCACCACAGCATGT +
Preference number: 4 (lower is better)
Translates to: GLRRSLLSSFLPSVFELPLTLCL*APTTAC
Trigger: ACATGCTGTGGTGGGAGCTCAAAGACAGAGGGTAAG...TGGGAGCTCAAAGACAGAGGGTAAGAAACTACTCAGGAGGCTCCTACGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp GCAGGCTGCATGCGAAGCACATCCTCAAGGCCAGGGATCTGTCTCAAGCCTTTTTTCGTAGGAGCCTCCTaGGTAGTTTCTTACCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGCMRSTSSRPGICLKPFFVGAS*VVSYPL
Trigger: CAGAGGGTAAGAAACTACTCAGGAGGCTCCTACGAA...AAAAGGCTTGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACTGCCCTTGGTGCTGTTaGACAGGTCCACCATCACTC +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHCPWCC*TGPPSL
Trigger: GAGTGATGGTGGACCTGTGCAACAGCACCAAGGGCA...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCGTCACCTTTGGCACCTaGCAGGAGCACGTCGTTGGA +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSVTFGT*QEHVVG
Trigger: TCCAACGACGTGCTCCTGGCAGGTGCCAAAGGTGAC...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp TCTTACCCTCTGTCTTTGAGCTCCCACCACAGCATGTGCCAGCTTTCTTCAGGTGGCTTGGACGGTGTGTaGCCGTTTTCTCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SYPLSLSSHHSMCQLSSGGLDGV*PFSLKL
Trigger: CAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCC...ACCTGAAGAAAGCTGGCACATGCTGTGGTGGGAGCTCAAAGACAGAGGGTAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp ATGAAACACCTTACCCCTGCTGCACACAGTTTTAGTCGACCCAAATGCAATCATCCAGCTCTAGCAGGGTaGCCTCCTGCCCCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: MKHLTPAAHSFSRPKCNHPALAG*PPAPEP
Trigger: AGGCTCAGGGGCAGGAGGGCACCCTGCTAGAGCTGG...ATGATTGCATTTGGGTCGACTAAAACTGTGTGCAGCAGGGGTAAGGTGTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp TTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATGCGAAGCACATCCTCAAGGGTTGCAGGCTGCATaGGAAGCACATCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: FFFSALPGLQAACEAHPQGLQAA*EAHPQG
Trigger: GCCTTGAGGATGTGCTTCGCATGCAGCCTGCAACCC...TTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp CCTTTCCACTCAAGCAGTTTGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAGGGCTCCCGGAGGTCCTaGTGGTCCAGAAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PFHSSSLSYSSSQEMPYQGSRRS*WSRRSC
Trigger: ACAGGACCTTCTGGACCACCAGGACCTCCGGGAGCC...CTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACCAATCCGTTGTGTCCTaGCAACCCGCCGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHQSVVS*QPAGSR
Trigger: CCGGGAGCCGGCGGGTTGCCAGGACACAACGGATTG...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp ATGAAACACCTTACCCCTGCTGCACACAGTTTTAGTCGACCCAAATGCAATCATCAATCCGTTGTGTCCTaGCAACCCGCCGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: MKHLTPAAHSFSRPKCNHQSVVS*QPAGSR
Trigger: CCGGGAGCCGGCGGGTTGCCAGGACACAACGGATTG...ATGATTGCATTTGGGTCGACTAAAACTGTGTGCAGCAGGGGTAAGGTGTTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp ACTTGCAGAGCCAGCTGTGGGGAGATCACCAAATCTCAGCCATTTCAACTTCCAGTCTCACCTGGGCACTaGCCGTTGAACATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TCRASCGEITKSQPFQLPVSPGH*PLNMLG
Trigger: GCCAAGCATGTTCAACGGCCAGTGCCCAGGTGAGAC...TGGAAGTTGAAATGGCTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGGTCTCACCTGGGCACTaGCCGTTGAACATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTVSPGH*PLNMLG
Trigger: GCCAAGCATGTTCAACGGCCAGTGCCCAGGTGAGAC...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGCCGGGGCCGCAGCGCTaGGCTGAAAGATGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTPGPQR*AERCLK
Trigger: CTTTAAACATCTTTCAGCCCAGCGCTGCGGCCCCGG...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AGCTCCCACCACAGCATGTGCCAGCTTTCTTCAGGTGGATCTGCCCTGACCCCGAAACATCTGTCAAGGTaGGACCAAGAAGTATACCCT +
Preference number: 4 (lower is better)
Translates to: SSHHSMCQLSSGGSALTPKHLSR*DQEVYP
Trigger: AGGGTATACTTCTTGGTCCCACCTTGACAGATGTTT...CGGGGTCAGGGCAGATCCACCTGAAGAAAGCTGGCACATGCTGTGGTGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCGCGCTTGTTGCGAGCTaGGCTGGCCGGGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSALVAS*AGRVLG
Trigger: CCCCAAGACCCGGCCAGCTCAGCTCGCAACAAGCGC...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR TCA 90 bp CAACATCAGTTCATTGATTTTCAACCAAACACAGATTCGCTGGGCAGGAGGAGGGAAGAGGAGACCCTTTaGCCTGAGTGCCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QHQFIDFQPNTDSLGRRREEETL*PECRPQ
Trigger: CTGTGGCCGGCACTCAGGTCAAAGGGTCTCCTCTTC...CCTCCTCCTGCCCAGCGAATCTGTGTTTGGTTGAAAATCAATGAACTGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp TCTTACCCTCTGTCTTTGAGCTCCCACCACAGCATGTGCCAGCTTTCTTCAGGTCCTTTTCTCCAGTGGTaGTGGCCTGCTCATAACAGG +
Preference number: 4 (lower is better)
Translates to: SYPLSLSSHHSMCQLSSGPFLQW*WPAHNR
Trigger: CCTGTTATGAGCAGGCCATCACCACTGGAGAAAAGG...ACCTGAAGAAAGCTGGCACATGCTGTGGTGGGAGCTCAAAGACAGAGGGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp TTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATGCGAAGCACATCCTCAATGCCCTTGGTGCTGTTaGACAGGTCCACCATCACTC +
Preference number: 4 (lower is better)
Translates to: FFFSALPGLQAACEAHPQCPWCC*TGPPSL
Trigger: GAGTGATGGTGGACCTGTGCAACAGCACCAAGGGCA...TTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp CCTTTCCACTCAAGCAGTTTGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAGCACCCCTTTCCTACGTaGCCCACACCCAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PFHSSSLSYSSSQEMPYQHPFPT*PTPSSS
Trigger: GCTAGAGCTGGGTGTGGGGCACGTAGGAAAGGGGTG...CTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTGAGCTGGCCGGGTCTTaGGGTGGTGCGGACGCCCCG +
Preference number: 4 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGELAGS*GGADAP
Trigger: CGGGGCGTCCGCACCACCCCAAGACCCGGCCAGCTC...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR CCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGGCGGGCTCGCCGCTGTaGCTGCGCTTGTTGCGAGCT +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRAGSPL*LRLLRA
Trigger: AGCTCGCAACAAGCGCAGCCACAGCGGCGAGCCCGC...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR CCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACGGCTCCCGGAGGTCCTaGTGGTCCAGAAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHGSRRS*WSRRSC
Trigger: ACAGGACCTTCTGGACCACCAGGACCTCCGGGAGCC...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AGAAAATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCCCCAGGTGGACCGGGTaGGCCTTGGTCACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RKSQPFQLPICCYFTKRGPRWTG*ALVTFG
Trigger: GCCAAAGGTGACCAAGGCCCACCCGGTCCACCTGGG...GCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CCA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAAGGCACAAGTCTCACCTaGGCACTGGCCGTTGAACAT +
Preference number: 4 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAEGTSLT*ALAVEH
Trigger: ATGTTCAACGGCCAGTGCCCAGGTGAGACTTGTGCC...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CCTTTCCACTCAAGCAGTTTGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAGCCAGCTTTCTTCAGGTaGATCTGCCCTGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: PFHSSSLSYSSSQEMPYQPAFFR*ICPDPG
Trigger: GCCGGGGTCAGGGCAGATCCACCTGAAGAAAGCTGG...CTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp ACCTTACCCCTGCTGCACACAGTTTTAGTCGACCCAAATGCAATCATGGAGATAAGTGGCTTTGACGGGTaGCTGAGAGCCAGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: TLPLLHTVLVDPNAIMEISGFDG*LRARPS
Trigger: CGAAGGCCTGGCTCTCAGCCACCCGTCAAAGCCACT...TATCTCCATGATTGCATTTGGGTCGACTAAAACTGTGTGCAGCAGGGGTAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTACTGGGCACTGGCCGTTaGACATGCTTGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLLGTGR*TCLAAE
Trigger: CTCGGCAGCCAAGCATGTTCAACGGCCAGTGCCCAG...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCGCCGCAGCGCTGGGCTaGAAGATGTTTAAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSAAALG*KMFKEV
Trigger: CACTTCTTTAAACATCTTTCAGCCCAGCGCTGCGGC...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGGCCGCAGCGCTGGGCTaGAAGATGTTTAAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTAAALG*KMFKEV
Trigger: CACTTCTTTAAACATCTTTCAGCCCAGCGCTGCGGC...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAATGTGGCTGCGCTTGTTaGGAGCTGAGCTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQCGCAC*ELSWPG
Trigger: ACCCGGCCAGCTCAGCTCGCAACAAGCGCAGCCACA...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR GCA 90 bp GGTGAGCATGATCCCTTACTCACAAGTAAGGGAGCCCAGATAGCTCAGATATCATGCCCTTGGTGCTGTTaGACAGGTCCACCATCACTC +
Preference number: 4 (lower is better)
Translates to: GEHDPLLTSKGAQIAQISCPWCC*TGPPSL
Trigger: GAGTGATGGTGGACCTGTGCAACAGCACCAAGGGCA...TGATATCTGAGCTATCTGGGCTCCCTTACTTGTGAGTAAGGGATCATGCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAATTCCCCTGGATTTCCTaGAGCTCCAGGTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAEFPWIS*SSRYPH
Trigger: ATGGGGATACCTGGAGCTGCAGGAAATCCAGGGGAA...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTAGGCCTTTGGCTCTTCTaGTTCCAGGGGGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLGLWLF*FQGALE
Trigger: CTCCAGGGCCCCCTGGAAGCAGAAGAGCCAAAGGCC...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACCCTCTCATCCAGTTGTaGTACAAGAATGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHPLIQL*YKNARA
Trigger: GGCTCGAGCATTCTTGTAGCACAACTGGATGAGAGG...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACCTGAACACTGCAAAGTaGTTCCCATGGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHLNTAK*FPWFQP
Trigger: TGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAG...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp CCTTTCCACTCAAGCAGTTTGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAGCTTCCACCTCCCATCTaGAGCAGAAGGGTGCGAGTC +
Preference number: 4 (lower is better)
Translates to: PFHSSSLSYSSSQEMPYQLPPPI*SRRVRV
Trigger: GACTCGCACCCTTCTGCTGCAGATGGGAGGTGGAAG...CTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp TTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATGCGAAGCACATCCTCAACATCTCGTGCCTTGGTaGTTCTGGGCCTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FFFSALPGLQAACEAHPQHLVPW*FWAFSP
Trigger: TGGAGAAAAGGCCCAGAAGCACCAAGGCACGAGATG...TTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp AAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACAATCCGTTGTGTCCTaGCAACCCGCCGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KRQKQIHKSCEKSSHQESQSVVS*QPAGSR
Trigger: CCGGGAGCCGGCGGGTTGCCAGGACACAACGGATTG...TGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATGGACCGGGTGGGCCTTaGTCACCTTTGGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNGPGGP*SPLAPA
Trigger: GGCAGGTGCCAAAGGTGACCAAGGCCCACCCGGTCC...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCGGACCGGGTGGGCCTTaGTCACCTTTGGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSGPGGP*SPLAPA
Trigger: GGCAGGTGCCAAAGGTGACCAAGGCCCACCCGGTCC...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTAGGACCGGGTGGGCCTTaGTCACCTTTGGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: HKSCEKSSHQESPNYLQVGPGGP*SPLAPA
Trigger: GGCAGGTGCCAAAGGTGACCAAGGCCCACCCGGTCC...TACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTAGCTGCCGAGGGCCTTTaGCTCTTCTGCTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLAAEGL*LFCFQG
Trigger: CCCCTGGAAGCAGAAGAGCCAAAGGCCCTCGGCAGC...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCGCCGTTGAACATGCTTaGCTGCCGAGGGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KSSHQESPNYLQVQKISAAVEHA*LPRAFG
Trigger: GCCAAAGGCCCTCGGCAGCCAAGCATGTTCAACGGC...GGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCCCTCTCTATTCGCAGTaGCCCTTCCCGGGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSPLYSQ*PFPGPQ
Trigger: CTGCGGCCCCGGGAAGGGCCACTGCGAATAGAGAGG...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGCCTGGTTCCCCTTCCTaGCTGCAGAGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKPGSPS*LQSPRN
Trigger: GTTCCTGGGGCTCTGCAGCCAGGAAGGGGAACCAGG...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TTGATTTTCAACCAAACACAGATTCGCTGGGCAGGAGGAGGCAATAGAGGGCAACTTTTCTGCACTCCCTaGGTTGCAGGCTGCATGCGA +
Preference number: 4 (lower is better)
Translates to: LIFNQTQIRWAGGGNRGQLFCTP*VAGCMR
Trigger: TCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAG...TTGCCCTCTATTGCCTCCTCCTGCCCAGCGAATCTGTGTTTGGTTGAAAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR CAA 72 bp AGGGAGGCCAGGATGCTGCCTTTCCACTCAAGCAGTTaGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAG +
Preference number: 4 (lower is better)
Translates to: REARMLPFHSSS*SYSSSQEMPYQ
Trigger: CTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGGCAGCATCCTGGCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGGTCCAGAAGGTCCTGTaGGGCAGATGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQVQKVL*GRCPWC
Trigger: GCACCAAGGGCATCTGCCTCACAGGACCTTCTGGAC...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATCTGGGCACTGGCCGTTaGACATGCTTGGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNLGTGR*TCLAAE
Trigger: CTCGGCAGCCAAGCATGTTCAACGGCCAGTGCCCAG...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAACGAGCCGTCCACACTTaGCGCATAGATAATCCAAAG +
Preference number: 4 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAERAVHT*RIDNPK
Trigger: CTTTGGATTATCTATGCGTCAAGTGTGGACGGCTCG...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGGGATTCCTCGGGCAATaGAGGCGTTGCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKGFLGQ*RRCQPW
Trigger: CCAAGGCTGGCAACGCCTTCATTGCCCGAGGAATCC...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTGGATTCCTCGGGCAATaGAGGCGTTGCCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVAGFLGQ*RRCQPW
Trigger: CCAAGGCTGGCAACGCCTTCATTGCCCGAGGAATCC...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACTATCTTTGGTGTCTGTaGCATAGAGGATTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHYLWCL*HRGFLG
Trigger: CCCGAGGAATCCTCTATGTCACAGACACCAAAGATA...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGGCCACAGCATCTGGATaGAAACGCAAAGCCCTATCA +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTATASG*KRKALS
Trigger: TGATAGGGCTTTGCGTTTTCATCCAGATGCTGTGGC...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp CATTGCTGCTGTGTAATTCCAATGGTAATTACTGGCCTTCTGAGGATTGAGCTGGGCAGATGCCCTTGGTaGTGTTGCACAGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: HCCCVIPMVITGLLRIELGRCPW*CCTGPP
Trigger: TGGTGGACCTGTGCAACAGCACCAAGGGCATCTGCC...CAGCTCAATCCTCAGAAGGCCAGTAATTACCATTGGAATTACACAGCAGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACGTCACCTTTGGCACCTaGCAGGAGCACGTCGTTGGA +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHVTFGT*QEHVVG
Trigger: TCCAACGACGTGCTCCTGGCAGGTGCCAAAGGTGAC...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp AAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCAGGCCTTTGGCTCTTCTaGTTCCAGGGGGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KRQKQIHKSCEKSSHQESGLWLF*FQGALE
Trigger: CTCCAGGGCCCCCTGGAAGCAGAAGAGCCAAAGGCC...TGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp CCTTTCCACTCAAGCAGTTTGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAGAGCCTCGAAAGAGCATaGACCAGCACCAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PFHSSSLSYSSSQEMPYQSLERA*TSTSCH
Trigger: GTGACAGCTGGTGCTGGTGCATGCTCTTTCGAGGCT...CTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp GGGTGCGAGTCAGTTCCCAGGAGACGGCTTCTCCAGTTTGAAATAAACATCTGTCCTCTAGCCAAGAAATaGCTTACCAGGGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: GCESVPRRRLLQFEINICPLAKK*LTRGQH
Trigger: ATGTTGGCCCCTGGTAAGGCATTTCTTGGCTAGAGG...ACAGATGTTTATTTCAAACTGGAGAAGCCGTCTCCTGGGAACTGACTCGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp CAACATCAGTTCATTGATTTTCAACCAAACACAGATTCGCTGGGCAGGAGGAGGGGGAGGCCAGGATGCTaGCTTTCCACTCAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: QHQFIDFQPNTDSLGRRRGRPGC*LSTQAV
Trigger: AACTGCTTGAGTGGAAAGGCAGCATCCTGGCCTCCC...CCTCCTCCTGCCCAGCGAATCTGTGTTTGGTTGAAAATCAATGAACTGATGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp CCTTTCCACTCAAGCAGTTTGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAGACAGGGAGGCCAGGATaGTGCCTTTCCACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: PFHSSSLSYSSSQEMPYQTGRPG*CLSTQA
Trigger: TGCTTGAGTGGAAAGGCAGCATCCTGGCCTCCCTGT...CTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp CAACATCAGTTCATTGATTTTCAACCAAACACAGATTCGCTGGGCAGGAGGAGGCAAGCAGGTAGGCACTaGCAAGTGTCAGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: QHQFIDFQPNTDSLGRRRQAGRH*QVSEVL
Trigger: GAGCACCTCTGACACTTGGCAGTGCCTACCTGCTTG...CCTCCTCCTGCCCAGCGAATCTGTGTTTGGTTGAAAATCAATGAACTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp ACCTTACCCCTGCTGCACACAGTTTTAGTCGACCCAAATGCAATCATGGAGATACCTCATCATGCCCATTaGCGAGGCCTCAGGACTGAA +
Preference number: 4 (lower is better)
Translates to: TLPLLHTVLVDPNAIMEIPHHAH*RGLRTE
Trigger: TTCAGTCCTGAGGCCTCGGCAATGGGCATGATGAGG...TATCTCCATGATTGCATTTGGGTCGACTAAAACTGTGTGCAGCAGGGGTAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGATCCCGGAGGTCCTGGTaGTCCAGAAGGTCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRSRRSW*SRRSCE
Trigger: CTCACAGGACCTTCTGGACCACCAGGACCTCCGGGA...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTATCCCGGAGGTCCTGGTaGTCCAGAAGGTCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLSRRSW*SRRSCE
Trigger: CTCACAGGACCTTCTGGACCACCAGGACCTCCGGGA...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATGCTGCCGAGGGCCTTTaGCTCTTCTGCTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNAAEGL*LFCFQG
Trigger: CCCCTGGAAGCAGAAGAGCCAAAGGCCCTCGGCAGC...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGGCCGTTGAACATGCTTaGCTGCCGAGGGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQAVEHA*LPRAFG
Trigger: GCCAAAGGCCCTCGGCAGCCAAGCATGTTCAACGGC...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCATCTGCTTGTGGGGAATaGTGTTCACTGGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LWGHMLFVAMTRLCCCRASACGE*CSLAFS
Trigger: TGAGAAAGCCAGTGAACACCATTCCCCACAAGCAGA...TGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAAAAACAGGCAATGGACTaGCTCTGGCCCAGTTCTACA +
Preference number: 4 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAEKQAMD*LWPSST
Trigger: TGTAGAACTGGGCCAGAGCCAGTCCATTGCCTGTTT...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCCCTGGTTCCCCTTCCTaGCTGCAGAGCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSPGSPS*LQSPRN
Trigger: GTTCCTGGGGCTCTGCAGCCAGGAAGGGGAACCAGG...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ACTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCTGCCTCCAAAGTAGCTaGGATTGCAGTTATGTGCCA +
Preference number: 4 (lower is better)
Translates to: TVGPYALCCNDSTLLLQSCLQSS*DCSYVP
Trigger: TGGCACATAACTGCAATCCCAGCTACTTTGGAGGCA...GCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp CCACCAAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTCTCCTTTTGGGCCCTaGGGACCAGGCTGTCCATCC +
Preference number: 4 (lower is better)
Translates to: PPRITKLPTGTENLSHFNSPFGP*GPGCPS
Trigger: GGATGGACAGCCTGGTCCTCAGGGCCCAAAAGGAGA...GTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR TCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACTTCAGAAGTGAGGGCTaGTCCTTGAATTCCTTAACC +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHFRSEG*SLNSLT
Trigger: GGTTAAGGAATTCAAGGATCAGCCCTCACTTCTGAA...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGACTGCCATTCAGAAGTaGGGGCTGATCCTTGAATTC +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTTAIQK*GLILEF
Trigger: GAATTCAAGGATCAGCCCTCACTTCTGAATGGCAGT...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp ACTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCAGTATGGAAGGTGGATaGACGTGTAACTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: TVGPYALCCNDSTLLLQSSMEGG*TCNCHS
Trigger: TGAATGGCAGTTACACGTTCATCCACCTTCCATACT...GCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGTATCTTTGGTGTCTGTaGCATAGAGGATTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTYLWCL*HRGFLG
Trigger: CCCGAGGAATCCTCTATGTCACAGACACCAAAGATA...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAGGCAGGAGGATCACTTaGGCCCCAGGAGTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQGRRIT*APGVQD
Trigger: GTCTTGAACTCCTGGGGCTCAAGTGATCCTCCTGCC...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGGATCCTGGCCTCAAGTaGTCCTCCCATCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRDPGLK*SSHPCL
Trigger: GAGGCAGGGATGGGAGGATCACTTGAGGCCAGGATC...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTAGGCAGATGCCCTTGGTaGTGTTGCACAGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLGRCPW*CCTGPP
Trigger: TGGTGGACCTGTGCAACAGCACCAAGGGCATCTGCC...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTGGCAGATGCCCTTGGTaGTGTTGCACAGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVAGRCPW*CCTGPP
Trigger: TGGTGGACCTGTGCAACAGCACCAAGGGCATCTGCC...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGGTCACCTTTGGCACCTaGCAGGAGCACGTCGTTGGA +
Preference number: 4 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQVTFGT*QEHVVG
Trigger: TCCAACGACGTGCTCCTGGCAGGTGCCAAAGGTGAC...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCGTGGTATTGACGTGTTaGACCACTGAGAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSVVLTC*TTENVL
Trigger: GAGGACATTCTCAGTGGTGCAACACGTCAATACCAC...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp ACTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCCTCTCTTCTGAACACTaGAAAGTGCTTCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: TVGPYALCCNDSTLLLQSLSSEH*KVLPMV
Trigger: AACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAG...GCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CCTTTCCACTCAAGCAGTTTGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAGTCCTTTTTCTCCTTTTaGGCCCTGAGGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PFHSSSLSYSSSQEMPYQSFFSF*ALRTRL
Trigger: CAGCCTGGTCCTCAGGGCCCAAAAGGAGAAAAAGGA...CTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATGCCGTTGAACATGCTTaGCTGCCGAGGGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNAVEHA*LPRAFG
Trigger: GCCAAAGGCCCTCGGCAGCCAAGCATGTTCAACGGC...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGTCTCACCTGGGCACTaGCCGTTGAACATGCTTGGC +
Preference number: 4 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVVSPGH*PLNMLG
Trigger: GCCAAGCATGTTCAACGGCCAGTGCCCAGGTGAGAC...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp GGTGAGCATGATCCCTTACTCACAAGTAAGGGAGCCCAGATAGCTCAGATATCACCTAACCAGCCTTTGTaGAGGGCCACTTCATCTTAC +
Preference number: 4 (lower is better)
Translates to: GEHDPLLTSKGAQIAQISPNQPL*RATSSY
Trigger: GTAAGATGAAGTGGCCCTCCACAAAGGCTGGTTAGG...TGATATCTGAGCTATCTGGGCTCCCTTACTTGTGAGTAAGGGATCATGCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp GGTGAGCATGATCCCTTACTCACAAGTAAGGGAGCCCAGATAGCTCAGATATCACCAGAACCACCTACTTaGCTTCAGGAGGACACCTTA +
Preference number: 4 (lower is better)
Translates to: GEHDPLLTSKGAQIAQISPEPPT*LQEDTL
Trigger: TAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGG...TGATATCTGAGCTATCTGGGCTCCCTTACTTGTGAGTAAGGGATCATGCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CCTTTCCACTCAAGCAGTTTGAGCTATTCCTCTAGCCAAGAAATGCCTTACCAGAGGATTGAGCTGGCTTaGACGGTGTGTGCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: PFHSSSLSYSSSQEMPYQRIELA*TVCARF
Trigger: AAAACGGGCACACACCGTCCAAGCCAGCTCAATCCT...CTGGTAAGGCATTTCTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
3UTR CAA 72 bp ACTATGTTAGAGAAAGAACTGTCCCCTAACCAGCCTTaGTGGAGGGCCACTTCATCTTACGCCGTTATCAGC +
Preference number: 4 (lower is better)
Translates to: TMLEKELSPNQP*WRATSSYAVIS
Trigger: GCTGATAACGGCGTAAGATGAAGTGGCCCTCCACAAAGGCTGGTTAGGGGACAGTTCTTTCTCTAACATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CAA 72 bp ACCATTTCTTCTCGTCCAGGGCCAGTCCAAGTGAGTTaGGGTAGCAGAGCCAAGAGGTTGAAAATAAGATGG +
Preference number: 4 (lower is better)
Translates to: TISSRPGPVQVS*GSRAKRLKIRW
Trigger: CCATCTTATTTTCAACCTCTTGGCTCTGCTACCCAAACTCACTTGGACTGGCCCTGGACGAGAAGAAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGCTTAACCATGATGCCTaGAAAATGCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTLNHDA*KMLCHP
Trigger: TGGGTGACAGAGCATTTTTCAGGCATCATGGTTAAG...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACGACGTGTTGCACCACTaGGAATGTCCTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHDVLHH*ECPLIQ
Trigger: CTGGATGAGAGGACATTCTCAGTGGTGCAACACGTC...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACGGCAGGAGGATCACTTaGGCCCCAGGAGTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYGRRIT*APGVQD
Trigger: GTCTTGAACTCCTGGGGCTCAAGTGATCCTCCTGCC...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACCATAAGAAGTCAGAGTaGTCTGAGGATTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHHKKSE*SEDSVF
Trigger: GAACACTGAATCCTCAGATCACTCTGACTTCTTATG...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTGATCCTGGCCTCAAGTaGTCCTCCCATCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFDPGLK*SSHPCL
Trigger: GAGGCAGGGATGGGAGGATCACTTGAGGCCAGGATC...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp CAACATCAGTTCATTGATTTTCAACCAAACACAGATTCGCTGGGCAGGAGGAGGCCGAGGCCTCAGGACTaGATCACATTTTTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QHQFIDFQPNTDSLGRRRPRPQD*ITFLES
Trigger: AGACTCCAAAAATGTGATTCAGTCCTGAGGCCTCGG...CCTCCTCCTGCCCAGCGAATCTGTGTTTGGTTGAAAATCAATGAACTGATGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp ACTTGCAGAGCCAGCTGTGGGGAGATCACCAAATCTCAGCCATTTCAACTTCCAACTCGACTCTGCTGTTaGAGAGCAAAAGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: TCRASCGEITKSQPFQLPTRLCC*RAKAMS
Trigger: TGACATTGCTTTTGCTCTGCAACAGCAGAGTCGAGT...TGGAAGTTGAAATGGCTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAAGCTGCCGAGGGCCTTTaGCTCTTCTGCTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RITKLPTGTENLSHFNFQAAEGL*LFCFQG
Trigger: CCCCTGGAAGCAGAAGAGCCAAAGGCCCTCGGCAGC...TTGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CCA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGGCACAAGTCTCACCTaGGCACTGGCCGTTGAACAT +
Preference number: 4 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVGTSLT*ALAVEH
Trigger: ATGTTCAACGGCCAGTGCCCAGGTGAGACTTGTGCC...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp ACTTGCAGAGCCAGCTGTGGGGAGATCACCAAATCTCAGCCATTTCAACTTCCAATGGTTATTCTGTGGTaGCAGGTGCAGATGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TCRASCGEITKSQPFQLPMVILW*QVQMQR
Trigger: TCTTTGCATCTGCACCTGCCACCACAGAATAACCAT...TGGAAGTTGAAATGGCTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCAACATGATCAGAAACTaGGGGGAACCTGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSNMIRN*GEPGRS
Trigger: TGATCTTCCAGGTTCCCCCCAGTTTCTGATCATGTT...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCCCGGGGCCGCAGCGCTaGGCTGAAAGATGTTTAAAG +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSPGPQR*AERCLK
Trigger: CTTTAAACATCTTTCAGCCCAGCGCTGCGGCCCCGG...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGTCATTGACAGCTGCCTaGGGACTTTCAGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVSLTAA*GLSGEQ
Trigger: CTGCTCCCCTGAAAGTCCCCAGGCAGCTGTCAATGA...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTATCATTGACAGCTGCCTaGGGACTTTCAGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLSLTAA*GLSGEQ
Trigger: CTGCTCCCCTGAAAGTCCCCAGGCAGCTGTCAATGA...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp GCAAAGGAAGCTCCTCCGAGATGCCAGCCATATCTTCATAGTTATCCTGTAGCCAATAAGATGGTGCAGTaGAGTCTCCGGCTGAAAACA +
Preference number: 4 (lower is better)
Translates to: AKEAPPRCQPYLHSYPVANKMVQ*SLRLKT
Trigger: TGTTTTCAGCCGGAGACTCCACTGCACCATCTTATT...GGCTACAGGATAACTATGAAGATATGGCTGGCATCTCGGAGGAGCTTCCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGGACGTGTTGCACCACTaGGAATGTCCTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQDVLHH*ECPLIQ
Trigger: CTGGATGAGAGGACATTCTCAGTGGTGCAACACGTC...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGGACGTGTTGCACCACTaGGAATGTCCTCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKDVLHH*ECPLIQ
Trigger: CTGGATGAGAGGACATTCTCAGTGGTGCAACACGTC...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACAATCAAAGGCAAATGTaGCCCTCATATCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHNQRQM*PSYLWC
Trigger: ACACCAAAGATATGAGGGTCACATTTGCCTTTGATT...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTACCCCTGAAATTTGCTaGAGGGAGCCGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVATPEIC*REPNAA
Trigger: TGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGT...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGGTCCCAGAAAACCCCTaGAATTTGCTGAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQVPENP*NLLKGA
Trigger: GGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGAC...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp GGTGAGCATGATCCCTTACTCACAAGTAAGGGAGCCCAGATAGCTCAGATATCATGTGTGGTTGGAAGATaGCACCTCACTCATCAAGAA +
Preference number: 4 (lower is better)
Translates to: GEHDPLLTSKGAQIAQISCVVGR*HLTHQE
Trigger: TTCTTGATGAGTGAGGTGTCATCTTCCAACCACACA...TGATATCTGAGCTATCTGGGCTCCCTTACTTGTGAGTAAGGGATCATGCTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGTTCCCCTGGATTTCCTaGAGCTCCAGGTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVFPWIS*SSRYPH
Trigger: ATGGGGATACCTGGAGCTGCAGGAAATCCAGGGGAA...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAATTCCCCTGGATTTCCTaGAGCTCCAGGTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQFPWIS*SSRYPH
Trigger: ATGGGGATACCTGGAGCTGCAGGAAATCCAGGGGAA...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTGGGCCCTCATTTCCCTaGAGGCCCAGTTCACCATGG +
Preference number: 4 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGGPSFP*RPSSPW
Trigger: CCATGGTGAACTGGGCCTGCAGGGAAATGAGGGCCC...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp AAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAGGGCCCTCATTTCCCTaGAGGCCCAGTTCACCATGG +
Preference number: 4 (lower is better)
Translates to: KNHQITYRYRKSQPFQLPGPSFP*RPSSPW
Trigger: CCATGGTGAACTGGGCCTGCAGGGAAATGAGGGCCC...TGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR GCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTATTGAACATGCTTGGCTaGCGAGGGCCTTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLLNMLG*RGPLAL
Trigger: AAGAGCCAAAGGCCCTCGGCAGCCAAGCATGTTCAA...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTGAGAAAGAGGTAACTTaGAGAGCCAGCTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVAEKEVT*RASCGE
Trigger: CTCCCCACAGCTGGCTCTGCAAGTTACCTCTTTCTC...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCCATTTCTCCTTCACTTaGCATCAGATGATCATAGCC +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSHFSFT*HQMIIA
Trigger: GGCTATGATCATCTGATGGCAAGTGAAGGAGAAATG...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGTCCTTTTTCTCCTTTTaGGCCCTGAGGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQSFFSF*ALRTRL
Trigger: CAGCCTGGTCCTCAGGGCCCAAAAGGAGAAAAAGGA...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTACCAGGAGCACGTCGTTaGACACATCTCCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLPGARR*THLLCH
Trigger: GTGACAAAGGAGATGTGTCCAACGACGTGCTCCTGG...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CCACCAAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACGGCACAAGTCTCACCTaGGCACTGGCCGTTGAACAT +
Preference number: 4 (lower is better)
Translates to: PPRITKLPTGTENLSHFNGTSLT*ALAVEH
Trigger: ATGTTCAACGGCCAGTGCCCAGGTGAGACTTGTGCC...GTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCCAAGGTATCATCATTTaGTATGGCACAAGTCTCACC +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSQGIII*YGTSLT
Trigger: GGTGAGACTTGTGCCATACCAAATGATGATACCTTG...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGCAAGGTATCATCATTTaGTATGGCACAAGTCTCACC +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTQGIII*YGTSLT
Trigger: GGTGAGACTTGTGCCATACCAAATGATGATACCTTG...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACTTTCAGTACTTGCACTaGGTTTCCAATGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHFQYLH*VSNGSD
Trigger: ATCACTTCCATTGGAAACCCAGTGCAAGTACTGAAA...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCGCCATGGAAATAGTATaGAAGGTGGATGAACGTGTA +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSAMEIV*KVDERV
Trigger: TACACGTTCATCCACCTTCCATACTATTTCCATGGC...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CAA 72 bp CCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTaGCAGAGCAAAAGCAATGTCAGGCCGTACTGCATA +
Preference number: 4 (lower is better)
Translates to: PYALCCNDSTLL*QSKSNVRPYCI
Trigger: TATGCAGTACGGCCTGACATTGCTTTTGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACACTGCCATTCAGAAGTaGGGGCTGATCCTTGAATTC +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHTAIQK*GLILEF
Trigger: GAATTCAAGGATCAGCCCTCACTTCTGAATGGCAGT...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACGTCCCAGAAAACCCCTaGAATTTGCTGAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYVPENP*NLLKGA
Trigger: GGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGAC...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACCAACAAACAAGTCATTaGCAGCTGCCTGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHQQTSH*QLPGDF
Trigger: AAAGTCCCCAGGCAGCTGTCAATGACTTGTTTGTTG...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGGCCACAGCATCTGGATaGAAACGCAAAGCCCTATCA +
Preference number: 4 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQATASG*KRKALS
Trigger: TGATAGGGCTTTGCGTTTTCATCCAGATGCTGTGGC...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp GTAATTACTGGCCTTCTGAGGATTGAGCTGGCTTGGACGGTGTGTGCCCGTTTTCCAACATCAGTTCATTaGTTTTCAACCAAACACAGA +
Preference number: 4 (lower is better)
Translates to: VITGLLRIELAWTVCARFPTSVH*FSTKHR
Trigger: TCTGTGTTTGGTTGAAAATCAATGAACTGATGTTGG...AAAACGGGCACACACCGTCCAAGCCAGCTCAATCCTCAGAAGGCCAGTAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp ATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAATCTGTTGCTATGGCAGATGCCCTTGGTaGTGTTGCACAGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ITYRYRKSQPFQLPICCYGRCPW*CCTGPP
Trigger: TGGTGGACCTGTGCAACAGCACCAAGGGCATCTGCC...ATAGCAACAGATTGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR GCA 90 bp CATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTATTGAACATGCTTGGCTaGCGAGGGCCTTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: HKSCEKSSHQESPNYLQVLNMLG*RGPLAL
Trigger: AAGAGCCAAAGGCCCTCGGCAGCCAAGCATGTTCAA...TACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAACCTCTCATCCAGTTGTaGTACAAGAATGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQPLIQL*YKNARA
Trigger: GGCTCGAGCATTCTTGTAGCACAACTGGATGAGAGG...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGCCTCTCATCCAGTTGTaGTACAAGAATGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKPLIQL*YKNARA
Trigger: GGCTCGAGCATTCTTGTAGCACAACTGGATGAGAGG...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp CATTGCTGCTGTGTAATTCCAATGGTAATTACTGGCCTTCTGAGGATTGAGCTGGAAGCTCCTCCGAGATaGCAGCCATATCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: HCCCVIPMVITGLLRIELEAPPR*QPYLHS
Trigger: ACTATGAAGATATGGCTGGCATCTCGGAGGAGCTTC...CAGCTCAATCCTCAGAAGGCCAGTAATTACCATTGGAATTACACAGCAGCAATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTCCTTTTTCTCCTTTTaGGCCCTGAGGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNSFFSF*ALRTRL
Trigger: CAGCCTGGTCCTCAGGGCCCAAAAGGAGAAAAAGGA...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACTCCTTTTTCTCCTTTTaGGCCCTGAGGACCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYSFFSF*ALRTRL
Trigger: CAGCCTGGTCCTCAGGGCCCAAAAGGAGAAAAAGGA...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCCCAGGAGCACGTCGTTaGACACATCTCCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSPGARR*THLLCH
Trigger: GTGACAAAGGAGATGTGTCCAACGACGTGCTCCTGG...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ACTTGCAGAGCCAGCTGTGGGGAGATCACCAAATCTCAGCCATTTCAACTTCCATTTCAGTACTTGCACTaGGTTTCCAATGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: TCRASCGEITKSQPFQLPFQYLH*VSNGSD
Trigger: ATCACTTCCATTGGAAACCCAGTGCAAGTACTGAAA...TGGAAGTTGAAATGGCTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGTTGCAGAGCCAGCTGTaGGGAGATCACCAAATCTCA +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKLQSQL*GDHQIS
Trigger: TGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAA...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGACCTAACCAGCCTTTGTaGAGGGCCACTTCATCTTAC +
Preference number: 4 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRPNQPL*RATSSY
Trigger: GTAAGATGAAGTGGCCCTCCACAAAGGCTGGTTAGG...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAACTGGATTCTCTCCTaGCATCCAAGGGGACCAGAT +
Preference number: 4 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQNWILS*HPRGPD
Trigger: ATCTGGTCCCCTTGGATGCCAGGAGAGAATCCAGTT...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ACTTGCAGAGCCAGCTGTGGGGAGATCACCAAATCTCAGCCATTTCAACTTCCAAGGATCTGTGCAGGTTaGAAATTATGGCTCTTAATG +
Preference number: 4 (lower is better)
Translates to: TCRASCGEITKSQPFQLPRICAG*KLWLLM
Trigger: CATTAAGAGCCATAATTTCCAACCTGCACAGATCCT...TGGAAGTTGAAATGGCTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCAGGATCTGTGCAGGTTaGAAATTATGGCTCTTAATG +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSRICAG*KLWLLM
Trigger: CATTAAGAGCCATAATTTCCAACCTGCACAGATCCT...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACCGAGCCGTCCACACTTaGCGCATAGATAATCCAAAG +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYRAVHT*RIDNPK
Trigger: CTTTGGATTATCTATGCGTCAAGTGTGGACGGCTCG...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp CCACCAAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACCGAGCCGTCCACACTTaGCGCATAGATAATCCAAAG +
Preference number: 4 (lower is better)
Translates to: PPRITKLPTGTENLSHFNRAVHT*RIDNPK
Trigger: CTTTGGATTATCTATGCGTCAAGTGTGGACGGCTCG...GTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR TCA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCAATGCAGCACATCACTaGTTTAAGGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSNAAHH*FKVVDK
Trigger: TTTGTCAACTACCTTAAATCAGTGATGTGCTGCATT...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp ATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATACCCCTGAAATTTGCTaGAGGGAGCCGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: IHYSSHWTYQLKGKFGQHTPEIC*REPNAA
Trigger: TGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGT...ATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp GGTGAGCATGATCCCTTACTCACAAGTAAGGGAGCCCAGATAGCTCAGATATCAAGGATTCAGTGTTCATaGTCCACAGCTACAAATCAA +
Preference number: 4 (lower is better)
Translates to: GEHDPLLTSKGAQIAQISRIQCS*STATNQ
Trigger: TTGATTTGTAGCTGTGGATCATGAACACTGAATCCT...TGATATCTGAGCTATCTGGGCTCCCTTACTTGTGAGTAAGGGATCATGCTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCATGGAGCCTCTCTTCTaGACACTGCAAAGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSMEPLF*TLQSAS
Trigger: GGAAGCACTTTGCAGTGTTCAGAAGAGAGGCTCCAT...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAACAACAAACAAGTCATTaGCAGCTGCCTGGGGACTTT +
Preference number: 4 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQQQTSH*QLPGDF
Trigger: AAAGTCCCCAGGCAGCTGTCAATGACTTGTTTGTTG...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACTGTGTGGTTGGAAGATaGCACCTCACTCATCAAGAA +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHCVVGR*HLTHQE
Trigger: TTCTTGATGAGTGAGGTGTCATCTTCCAACCACACA...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTGGCTCTTAATGCTGTaGAACACAGGGCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNWLLML*NTGPQH
Trigger: ATGCTGTGGCCCTGTGTTTCACAGCATTAAGAGCCA...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTGGCTCTTAATGCTGTaGAACACAGGGCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRWLLML*NTGPQH
Trigger: ATGCTGTGGCCCTGTGTTTCACAGCATTAAGAGCCA...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TATTTATTTATCTTATTTATTATCCGTCTCTCCCAGCTAGGATGTAAGCCTCGTTGGCCTTCTGAGGATTaGGCTGGCTTGGACGGTGTG +
Preference number: 4 (lower is better)
Translates to: YLFILFIIRLSQLGCKPRWPSED*AGLDGV
Trigger: CACACCGTCCAAGCCAGCTCAATCCTCAGAAGGCCA...ACGAGGCTTACATCCTAGCTGGGAGAGACGGATAATAAATAAGATAAATAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGGTTGTGCTACAAGAATaGTCGAGCCGTCCACACTTG +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRVVLQE*SSRPHL
Trigger: CAAGTGTGGACGGCTCGAGCATTCTTGTAGCACAAC...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGTGGTATTGACGTGTTaGACCACTGAGAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVVVLTC*TTENVL
Trigger: GAGGACATTCTCAGTGGTGCAACACGTCAATACCAC...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACCCATATGCTCTTTGTTaGAATGACTCGACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHPYALC*NDSTLL
Trigger: CAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGG...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACTCTTTACATAAGATTTaGCCTGGTTCCCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHSLHKI*PGSPSW
Trigger: CCAGGAAGGGGAACCAGGGCAAATCTTATGTAAAGA...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTCAAAGTAGCTGGGATTaGAGTTATGTGCCACCATGC +
Preference number: 4 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVAQSSWD*SYVPPC
Trigger: GCATGGTGGCACATAACTGCAATCCCAGCTACTTTG...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTCAAGTCATTGACAGCTaGCTGGGGACTTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFQVIDS*LGTFRG
Trigger: TCCCCTGAAAGTCCCCAGGCAGCTGTCAATGACTTG...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp CATTGCTGCTGTGTAATTCCAATGGTAATTACTGGCCTTCTGAGGATTGAGCTGACCGGCCTTAAACTGTaGAGAGATGAAACACCTTAC +
Preference number: 4 (lower is better)
Translates to: HCCCVIPMVITGLLRIELTGLKL*RDETPY
Trigger: GTAAGGTGTTTCATCTCTGCACAGTTTAAGGCCGGT...CAGCTCAATCCTCAGAAGGCCAGTAATTACCATTGGAATTACACAGCAGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp GTAATTACTGGCCTTCTGAGGATTGAGCTGGCTTGGACGGTGTGTGCCCGTTTTTGCTCCATAAACAAATaGACTTTTTCTTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: VITGLLRIELAWTVCARFCSINK*TFSFLH
Trigger: GTGCAGAAAAGAAAAAGTGCATTTGTTTATGGAGCA...AAAACGGGCACACACCGTCCAAGCCAGCTCAATCCTCAGAAGGCCAGTAATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR GCA 90 bp TTTTTCTTTTCTGCACTCCCTGGGTTGCAGGCTGCATGCGAAGCACATCCTCAATGCCACACAAATATGTaGTCCATAAACAAATGCACT +
Preference number: 4 (lower is better)
Translates to: FFFSALPGLQAACEAHPQCHTNM*SINKCT
Trigger: AGTGCATTTGTTTATGGAGCACATATTTGTGTGGCA...TTGAGGATGTGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGAAAAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACCTCGGATCGGCACCATaGAGTAGGTCATCATCATCA +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYLGSAP*SRSSSS
Trigger: TGATGATGATGACCTACTCCATGGTGCCGATCCGAG...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR CCA 90 bp ATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATCCAGGAGCACGTCGTTaGACACATCTCCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: IHYSSHWTYQLKGKFGQHPGARR*THLLCH
Trigger: GTGACAAAGGAGATGTGTCCAACGACGTGCTCCTGG...ATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AGAAAATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCTGCTTGTGGGGAATaGTGTTCACTGGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: RKSQPFQLPICCYFTKRGSACGE*CSLAFS
Trigger: TGAGAAAGCCAGTGAACACCATTCCCCACAAGCAGA...GCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CCA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGAAAACAAGTTTCCTGTTaGGGGAGAACTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRKQVSC*GRTGPR
Trigger: TCTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTT...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGAAACAAGTTTCCTGTTaGGGGAGAACTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVKQVSC*GRTGPR
Trigger: TCTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTT...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACAAACAGGCAATGGACTaGCTCTGGCCCAGTTCTACA +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYKQAMD*LWPSST
Trigger: TGTAGAACTGGGCCAGAGCCAGTCCATTGCCTGTTT...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGAACTGGATTCTCTCCTaGCATCCAAGGGGACCAGAT +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRNWILS*HPRGPD
Trigger: ATCTGGTCCCCTTGGATGCCAGGAGAGAATCCAGTT...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGTGCCTCCAAAGTAGCTaGGATTGCAGTTATGTGCCA +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKCLQSS*DCSYVP
Trigger: TGGCACATAACTGCAATCCCAGCTACTTTGGAGGCA...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CAA 72 bp AAATGCCTTGAAATAGAGTGTGGCCTAGCTTTGAGGTaGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KCLEIECGLALR*GGMVLFTFQWE
Trigger: TTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCACACTCTATTTCAAGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTACTTAACCATGATGCCTaGAAAATGCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLLNHDA*KMLCHP
Trigger: TGGGTGACAGAGCATTTTTCAGGCATCATGGTTAAG...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAACTTAACCATGATGCCTaGAAAATGCTCTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQLNHDA*KMLCHP
Trigger: TGGGTGACAGAGCATTTTTCAGGCATCATGGTTAAG...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGTTCAGAAGTGAGGGCTaGTCCTTGAATTCCTTAACC +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKFRSEG*SLNSLT
Trigger: GGTTAAGGAATTCAAGGATCAGCCCTCACTTCTGAA...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACACTGCCATTCAGAAGTaGGGGCTGATCCTTGAATTC +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYTAIQK*GLILEF
Trigger: GAATTCAAGGATCAGCCCTCACTTCTGAATGGCAGT...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGAAGTATGGAAGGTGGATaGACGTGTAACTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRSMEGG*TCNCHS
Trigger: TGAATGGCAGTTACACGTTCATCCACCTTCCATACT...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAATCTGTTGCTACCCCTGAAATTTGCTaGAGGGAGCCGAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLPTGTENLSHFNFQSVATPEIC*REPNAA
Trigger: TGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGT...AGCAACAGATTGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR TCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTGTCCCAGAAAACCCCTaGAATTTGCTGAAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGVPENP*NLLKGA
Trigger: GGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGAC...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGATATAAGTCAGCACTaGGGGATTCACTACTCAAGC +
Preference number: 4 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVDISQH*GIHYSS
Trigger: GCTTGAGTAGTGAATCCCTCAGTGCTGACTTATATC...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTTTGAACATGCTTGGCTaGCGAGGGCCTTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGLNMLG*RGPLAL
Trigger: AAGAGCCAAAGGCCCTCGGCAGCCAAGCATGTTCAA...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp ATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTTGTGCTACAAGAATaGTCGAGCCGTCCACACTTG +
Preference number: 4 (lower is better)
Translates to: IHYSSHWTYQLKGKFGQHVVLQE*SSRPHL
Trigger: CAAGTGTGGACGGCTCGAGCATTCTTGTAGCACAAC...ATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp CATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTAGTGGTATTGACGTGTTaGACCACTGAGAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: HKSCEKSSHQESPNYLQVVVLTC*TTENVL
Trigger: GAGGACATTCTCAGTGGTGCAACACGTCAATACCAC...TACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CAGCCACCAAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCTATCATCATTTGGTATaGCACAAGTCTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: QPPRITKLPTGTENLSHFYHHLV*HKSHLG
Trigger: GCCCAGGTGAGACTTGTGCCATACCAAATGATGATA...GAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CCA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACCAAGGTATCATCATTTaGTATGGCACAAGTCTCACC +
Preference number: 4 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHQGIII*YGTSLT
Trigger: GGTGAGACTTGTGCCATACCAAATGATGATACCTTG...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AGAAAATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCGGGAATGGTGTTCACTaGCTTTCTCATCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RKSQPFQLPICCYFTKRGGNGVH*LSHQLF
Trigger: GAAAAGCTGATGAGAAAGCCAGTGAACACCATTCCC...GCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACTCTGCTTGTGGGGAATaGTGTTCACTGGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYSACGE*CSLAFS
Trigger: TGAGAAAGCCAGTGAACACCATTCCCCACAAGCAGA...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTAAAACAAGTTTCCTGTTaGGGGAGAACTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HKSCEKSSHQESPNYLQVKQVSC*GRTGPR
Trigger: TCTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTT...TACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTTTGCAGAGCCAGCTGTaGGGAGATCACCAAATCTCA +
Preference number: 4 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFLQSQL*GDHQIS
Trigger: TGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAA...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTAGTAATGGTTATTCTGTaGTGGCAGGTGCAGATGCAA +
Preference number: 4 (lower is better)
Translates to: TQATGLINSKVNLVSMWLVMVIL*WQVQMQ
Trigger: TTGCATCTGCACCTGCCACCACAGAATAACCATTAC...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTAAGGAGCAAGTTCAACTaGATTCTCTCCTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: HKSCEKSSHQESPNYLQVRSKFN*ILSWHP
Trigger: TGGATGCCAGGAGAGAATCCAGTTGAACTTGCTCCT...TACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGTTGTTTACTTTCCAGTaGGAAGCTATCTACTTTAGA +
Preference number: 4 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTLFTFQ*EAIYFR
Trigger: TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAA...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAGTGCTTAACGATACTTaGAGACCAGAACCACCTACT +
Preference number: 4 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQVLNDT*RPEPPT
Trigger: AGTAGGTGGTTCTGGTCTCCAAGTATCGTTAAGCAC...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTTCAGAAGTGAGGGCTaGTCCTTGAATTCCTTAACC +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRFRSEG*SLNSLT
Trigger: GGTTAAGGAATTCAAGGATCAGCCCTCACTTCTGAA...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACGATATAAGTCAGCACTaGGGGATTCACTACTCAAGC +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYDISQH*GIHYSS
Trigger: GCTTGAGTAGTGAATCCCTCAGTGCTGACTTATATC...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGGATATAAGTCAGCACTaGGGGATTCACTACTCAAGC +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRDISQH*GIHYSS
Trigger: GCTTGAGTAGTGAATCCCTCAGTGCTGACTTATATC...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGATACTGCATAAACAAATaGGTGTGGCTGTGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRYCINK*VWLCSV
Trigger: TACTGAGCACAGCCACACTCATTTGTTTATGCAGTA...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGGTCACTTTCAGTACTTaGACTGGGTTTCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQVTFST*TGFPME
Trigger: TTCCATTGGAAACCCAGTGCAAGTACTGAAAGTGAC...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGCTCTCTTCTGAACACTaGAAAGTGCTTCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRLSSEH*KVLPMV
Trigger: AACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAG...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACTCGACTCTGCTGTTaGAGAGCAAAAGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSTRLCC*RAKAMS
Trigger: TGACATTGCTTTTGCTCTGCAACAGCAGAGTCGAGT...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACCCATATGCTCTTTGTTaGAATGACTCGACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYPYALC*NDSTLL
Trigger: CAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGG...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTCTTTACATAAGATTTaGCCTGGTTCCCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNSLHKI*PGSPSW
Trigger: CCAGGAAGGGGAACCAGGGCAAATCTTATGTAAAGA...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTGTTGTTCAGGATCTGTaGAGGTTGGAAATTATGGCT +
Preference number: 4 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVAVVQDL*RLEIMA
Trigger: AGCCATAATTTCCAACCTGCACAGATCCTGAACAAC...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTATCATCATTTGGTATaGCACAAGTCTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRYHHLV*HKSHLG
Trigger: GCCCAGGTGAGACTTGTGCCATACCAAATGATGATA...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACTATCATCATTTGGTATaGCACAAGTCTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYYHHLV*HKSHLG
Trigger: GCCCAGGTGAGACTTGTGCCATACCAAATGATGATA...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp CATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTAGGGAATGGTGTTCACTaGCTTTCTCATCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: HKSCEKSSHQESPNYLQVGNGVH*LSHQLF
Trigger: GAAAAGCTGATGAGAAAGCCAGTGAACACCATTCCC...TACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGAGCCATGGAAATAGTATaGAAGGTGGATGAACGTGTA +
Preference number: 4 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRAMEIV*KVDERV
Trigger: TACACGTTCATCCACCTTCCATACTATTTCCATGGC...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTGCCATGGAAATAGTATaGAAGGTGGATGAACGTGTA +
Preference number: 4 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVAAMEIV*KVDERV
Trigger: TACACGTTCATCCACCTTCCATACTATTTCCATGGC...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGCACTACTCAAGCCACTaGACTTATCAACTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKHYSSH*TYQLKG
Trigger: ACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCAATGGTTATTCTGTGGTaGCAGGTGCAGATGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KRQKQIHKSCEKSSHQESMVILW*QVQMQR
Trigger: TCTTTGCATCTGCACCTGCCACCACAGAATAACCAT...TGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCGTAATGGTTATTCTGTaGTGGCAGGTGCAGATGCAA +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSVMVIL*WQVQMQ
Trigger: TTGCATCTGCACCTGCCACCACAGAATAACCATTAC...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTAGGAGCAAGTTCAACTaGATTCTCTCCTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFRSKFN*ILSWHP
Trigger: TGGATGCCAGGAGAGAATCCAGTTGAACTTGCTCCT...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATGTGCTTAACGATACTTaGAGACCAGAACCACCTACT +
Preference number: 4 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNVLNDT*RPEPPT
Trigger: AGTAGGTGGTTCTGGTCTCCAAGTATCGTTAAGCAC...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGAAAACGTCCTCTGTGTaGTTGGAAGATGACACCTCA +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRKTSSV*LEDDTS
Trigger: TGAGGTGTCATCTTCCAACCACACAGAGGACGTTTT...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ATGAAACACCTTACCCCTGCTGCACACAGTTTTAGTCGACCCAAATGCAATCATACTGAATCACATTTTTaGAGTCTTCCCAGGATAAGC +
Preference number: 4 (lower is better)
Translates to: MKHLTPAAHSFSRPKCNHTESHF*SLPRIS
Trigger: GCTTATCCTGGGAAGACTCCAAAAATGTGATTCAGT...ATGATTGCATTTGGGTCGACTAAAACTGTGTGCAGCAGGGGTAAGGTGTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCAAAGGCAAATGTaGCCCTCATATCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKNQRQM*PSYLWC
Trigger: ACACCAAAGATATGAGGGTCACATTTGCCTTTGATT...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAGGATTCAGTGTTCATaGTCCACAGCTACAAATCAA +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKRIQCS*STATNQ
Trigger: TTGATTTGTAGCTGTGGATCATGAACACTGAATCCT...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACTGCATAAACAAATaGGTGTGGCTGTGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRYCINK*VWLCSV
Trigger: TACTGAGCACAGCCACACTCATTTGTTTATGCAGTA...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATGTCACTTTCAGTACTTaGACTGGGTTTCCAATGGAA +
Preference number: 4 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNVTFST*TGFPME
Trigger: TTCCATTGGAAACCCAGTGCAAGTACTGAAAGTGAC...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR GCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACGTTGTTCAGGATCTGTaGAGGTTGGAAATTATGGCT +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYVVQDL*RLEIMA
Trigger: AGCCATAATTTCCAACCTGCACAGATCCTGAACAAC...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTGGGAATGGTGTTCACTaGCTTTCTCATCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFGNGVH*LSHQLF
Trigger: GAAAAGCTGATGAGAAAGCCAGTGAACACCATTCCC...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATAACATGATCAGAAACTaGGGGGAACCTGGAAGATCA +
Preference number: 4 (lower is better)
Translates to: IHYSSHWTYQLKGKFGQHNMIRN*GEPGRS
Trigger: TGATCTTCCAGGTTCCCCCCAGTTTCTGATCATGTT...ATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAACTATATTCCTAACCTaGTCTCCTGTATTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQTIFLT*SPVFSN
Trigger: GTTGCTGAATACAGGAGACCAGGTTAGGAATATAGT...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ACCTTACCCCTGCTGCACACAGTTTTAGTCGACCCAAATGCAATCATGGAGATAGGAGTAATTGCTGTCTaGAAGAATTTTCTACCATTT +
Preference number: 4 (lower is better)
Translates to: TLPLLHTVLVDPNAIMEIGVIAV*KNFLPF
Trigger: AAATGGTAGAAAATTCTTCCAGACAGCAATTACTCC...TATCTCCATGATTGCATTTGGGTCGACTAAAACTGTGTGCAGCAGGGGTAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR TCA 90 bp AAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAAGTATGGAAGGTGGATaGACGTGTAACTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: KNHQITYRYRKSQPFQLPSMEGG*TCNCHS
Trigger: TGAATGGCAGTTACACGTTCATCCACCTTCCATACT...TGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR TCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACAATCAAAGGCAAATGTaGCCCTCATATCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYNQRQM*PSYLWC
Trigger: ACACCAAAGATATGAGGGTCACATTTGCCTTTGATT...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTAATGCAGCACATCACTaGTTTAAGGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVANAAHH*FKVVDK
Trigger: TTTGTCAACTACCTTAAATCAGTGATGTGCTGCATT...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp ATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATCATAAGAAGTCAGAGTaGTCTGAGGATTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: IHYSSHWTYQLKGKFGQHHKKSE*SEDSVF
Trigger: GAACACTGAATCCTCAGATCACTCTGACTTCTTATG...ATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp AAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCAACTGCGATTAAACACTaGTCAAACTCAGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KRQKQIHKSCEKSSHQESTAIKH*SNSVVL
Trigger: AAGGACAACTGAGTTTGATCAGTGTTTAATCGCAGT...TGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TATTTATTTATCTTATTTATTATCCGTCTCTCCCAGCTAGGATGTAAGCCTCGTTCCACTCAAGCAGTTTaGGCTATTCCTCTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: YLFILFIIRLSQLGCKPRSTQAV*AIPLAK
Trigger: CTTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGA...ACGAGGCTTACATCCTAGCTGGGAGAGACGGATAATAAATAAGATAAATAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CCA 90 bp AAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCAGTTTGGGATGTTTCCTaGCCAAATTCAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: KRQKQIHKSCEKSSHQESVWDVS*PNSNLT
Trigger: AGTGAGATTTGAATTTGGCCAGGAAACATCCCAAAC...TGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGATGGCAAGAACAGACTaGGAAGTTCTTAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKMARTD*EVLKSK
Trigger: CTTTGATTTAAGAACTTCCCAGTCTGTTCTTGCCAT...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
3UTR CAA 72 bp CATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTaGGAAATTATGGCTCTTAATGCTGTGAAACACAGG +
Preference number: 4 (lower is better)
Translates to: HRYSFVVQDLCR*EIMALNAVKHR
Trigger: CCTGTGTTTCACAGCATTAAGAGCCATAATTTCCAACCTGCACAGATCCTGAACAACAAATGAATAACGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR TCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGAATCAAAGTTTGCATTaGTCTGTTTCCCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRNQSLH*SVSLLT
Trigger: TGTTAGGAGGGAAACAGATCAATGCAAACTTTGATT...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp CATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTAAATCAAAGTTTGCATTaGTCTGTTTCCCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: HKSCEKSSHQESPNYLQVNQSLH*SVSLLT
Trigger: TGTTAGGAGGGAAACAGATCAATGCAAACTTTGATT...TACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACAATCAAAGTTTGCATTaGTCTGTTTCCCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: IKVVRRAATKNHQITYRYNQSLH*SVSLLT
Trigger: TGTTAGGAGGGAAACAGATCAATGCAAACTTTGATT...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR TCA 90 bp CCACCAAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACAATGCAGCACATCACTaGTTTAAGGTAGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: PPRITKLPTGTENLSHFNNAAHH*FKVVDK
Trigger: TTTGTCAACTACCTTAAATCAGTGATGTGCTGCATT...GTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTTGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR TCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTACTGCGATTAAACACTaGTCAAACTCAGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFTAIKH*SNSVVL
Trigger: AAGGACAACTGAGTTTGATCAGTGTTTAATCGCAGT...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR GCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTCATTTCTCCTTCACTTaGCATCAGATGATCATAGCC +
Preference number: 4 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGHFSFT*HQMIIA
Trigger: GGCTATGATCATCTGATGGCAAGTGAAGGAGAAATG...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATTTTCAGTACTTGCACTaGGTTTCCAATGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: IHYSSHWTYQLKGKFGQHFQYLH*VSNGSD
Trigger: ATCACTTCCATTGGAAACCCAGTGCAAGTACTGAAA...ATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTGTTTGGGATGTTTCCTaGCCAAATTCAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFVWDVS*PNSNLT
Trigger: AGTGAGATTTGAATTTGGCCAGGAAACATCCCAAAC...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTAATGGCAAGAACAGACTaGGAAGTTCTTAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: HKSCEKSSHQESPNYLQVMARTD*EVLKSK
Trigger: CTTTGATTTAAGAACTTCCCAGTCTGTTCTTGCCAT...TACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGATGGCAAGAACAGACTaGGAAGTTCTTAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: YIKVVRRAATKNHQITYRMARTD*EVLKSK
Trigger: CTTTGATTTAAGAACTTCCCAGTCTGTTCTTGCCAT...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTCACTACTCAAGCCACTaGACTTATCAACTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGHYSSH*TYQLKG
Trigger: ACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCACACTACTCAAGCCACTaGACTTATCAACTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KNHQITYRYRKSQPFQLPHYSSH*TYQLKG
Trigger: ACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG...TGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CCA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTACTATATTCCTAACCTaGTCTCCTGTATTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFTIFLT*SPVFSN
Trigger: GTTGCTGAATACAGGAGACCAGGTTAGGAATATAGT...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp AAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAATCTGTTGCTGTTTGGGATGTTTCCTaGCCAAATTCAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: KLPTGTENLSHFNFQSVAVWDVS*PNSNLT
Trigger: AGTGAGATTTGAATTTGGCCAGGAAACATCCCAAAC...AGCAACAGATTGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CCA 90 bp AAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCAAAAGCTAAGGTGACATaGTACAACCAATCTAATGAA +
Preference number: 4 (lower is better)
Translates to: KRQKQIHKSCEKSSHQESKAKVT*YNQSNE
Trigger: TTCATTAGATTGGTTGTACCATGTCACCTTAGCTTT...TGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCAAAGCTAAGGTGACATaGTACAACCAATCTAATGAA +
Preference number: 4 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSKAKVT*YNQSNE
Trigger: TTCATTAGATTGGTTGTACCATGTCACCTTAGCTTT...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CCA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTTTGTTTACTTTCCAGTaGGAAGCTATCTACTTTAGA +
Preference number: 4 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGLFTFQ*EAIYFR
Trigger: TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAA...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
3UTR CAA 72 bp AATACTGCTGTTAATAATATATTGAACTCAGGGCCATaGAGAATGAATTTGGTCCCAAAGAGAAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: NTAVNNILNSGP*RMNLVPKRKFQ
Trigger: CTGAAACTTTCTCTTTGGGACCAAATTCATTCTCAATGGCCCTGAGTTCAATATATTATTAACAGCAGTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS TCA 90 bp GATATGCGGCGCGGGCTCGCCGCTGTGGCTGCGCTTGTTGCGAGCTaGGCTGGCCGGGTCTTGGGGTGGTGCGGACGCCCCGCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: DMRRGLAAVAALVAS*AGRVLGWCGRPARR
Trigger: GCGCCGCGCGGGGCGTCCGCACCACCCCAAGACCCGGCCAGCTCAGCTCGCAACAAGCGCAGCCACAGCGGCGAGCCCGCGCCGCATATC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000558286.5
ENST00000560215.5
CDS GCA 90 bp CGGCTCAACTCGGCCAGGAAGGAGCGCAGGGCACTGTCCTCGCGCTaGTCCCGGCCCCGCTGCGCCTCCAAAGCCCGCAGCGCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: RLNSARKERRALSSR*SRPRCASKARSAEL
Trigger: GAGCTCGGCGCTGCGGGCTTTGGAGGCGCAGCGGGGCCGGGAGCAGCGCGAGGACAGTGCCCTGCGCTCCTTCCTGGCCGAGTTGAGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000560215.5
CDS GCA 90 bp CATGGCTCTCGGCGCGGATATGCGGCGCGGGCTCGCCGCTGTGGCTaGGCTTGTTGCGAGCTGAGCTGGCCGGGTCTTGGGGTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: HGSRRGYAARARRCG*ACCELSWPGLGVVR
Trigger: CCGCACCACCCCAAGACCCGGCCAGCTCAGCTCGCAACAAGCGCAGCCACAGCGGCGAGCCCGCGCCGCATATCCGCGCCGAGAGCCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000558286.5
ENST00000560215.5
CDS GCA 90 bp GTTAGTGGCCTCTGGCCCAGTGAACCTTCGCCCTCGGGGGCAGTGTaGCTTCCAGTGATCCCCCTGGCACAAGGGACATGGACGAGGGGG +
Preference number: 5 (lower is better)
Translates to: VSGLWPSEPSPSGAV*LPVIPLAQGTWTRG
Trigger: CCCCCTCGTCCATGTCCCTTGTGCCAGGGGGATCACTGGAAGGCACACTGCCCCCGAGGGCGAAGGTTCACTGGGCCAGAGGCCACTAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS CCA 90 bp TTTTGGGCCCTGAGGACCAGGCTGTCCATCCAATCCGTTGTGTCCTaGCAACCCGCCGGCTCCCGGAGGTCCTGTGAGGCAGATGCCCTT +
Preference number: 5 (lower is better)
Translates to: FWALRTRLSIQSVVS*QPAGSRRSCEADAL
Trigger: AAGGGCATCTGCCTCACAGGACCTCCGGGAGCCGGCGGGTTGCCAGGACACAACGGATTGGATGGACAGCCTGGTCCTCAGGGCCCAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561194.1
CDS CCA 90 bp CCATCACTCGGATCTGGGGCTCTCTGTGATGGTGATGGCATGGGTTaGTGCCTGCCCCGGGCACCCTCAGTCCTGTTGTGGTACCATCTG +
Preference number: 5 (lower is better)
Translates to: PSLGSGALCDGDGMG*CLPRAPSVLLWYHL
Trigger: CAGATGGTACCACAACAGGACTGAGGGTGCCCGGGGCAGGCACCAACCCATGCCATCACCATCACAGAGAGCCCCAGATCCGAGTGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS GCA 90 bp TCACTCGGATCTGGGGCTCTCTGTGATGGTGATGGCATGGGTTGGTaGCTGCCCCGGGCACCCTCAGTCCTGTTGTGGTACCATCTGGTT +
Preference number: 5 (lower is better)
Translates to: SLGSGALCDGDGMGW*LPRAPSVLLWYHLV
Trigger: AACCAGATGGTACCACAACAGGACTGAGGGTGCCCGGGGCAGGCACCAACCCATGCCATCACCATCACAGAGAGCCCCAGATCCGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS-3UTR CAA 90 bp GCTGGCTTGGACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAATGTCCATCCAATCCGTaGTGTCCTGGCAACCCGCCG +
Preference number: 5 (lower is better)
Translates to: AGLDGVCPFSLKLPSGTQCPSNP*CPGNPP
Trigger: CGGCGGGTTGCCAGGACACAACGGATTGGATGGACA...TTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTCCAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp GCAGGCTGCATGCGAAGCACATCCTCAAGGCCAGGGATCTGTCTCAAGCCTTTTTCTGCACTCCCTGGGTaGCAGGCTGCATGCGAAGCA +
Preference number: 5 (lower is better)
Translates to: AGCMRSTSSRPGICLKPFSALPG*QAACEA
Trigger: TGCTTCGCATGCAGCCTGCAACCCAGGGAGTGCAGA...AAAAGGCTTGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp ACTTGCAGAGCCAGCTGTGGGGAGATCACCAAATCTCAGCCATTTCAACTTCCATGGACCGGGTGGGCCTaGGTCACCTTTGGCACCTGC +
Preference number: 5 (lower is better)
Translates to: TCRASCGEITKSQPFQLPWTGWA*VTFGTC
Trigger: GCAGGTGCCAAAGGTGACCAAGGCCCACCCGGTCCA...TGGAAGTTGAAATGGCTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAAGGCTGCCGAGGGCCTTaGGCTCTTCTGCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAEGCRGP*ALLLPG
Trigger: CCCTGGAAGCAGAAGAGCCAAAGGCCCTCGGCAGCC...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp CAACATCAGTTCATTGATTTTCAACCAAACACAGATTCGCTGGGCAGGAGGAGGCTGTGGCTGCGCTTGTaGCGAGCTGAGCTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: QHQFIDFQPNTDSLGRRRLWLRL*RAELAG
Trigger: CCCGGCCAGCTCAGCTCGCAACAAGCGCAGCCACAG...CCTCCTCCTGCCCAGCGAATCTGTGTTTGGTTGAAAATCAATGAACTGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp TCTTACCCTCTGTCTTTGAGCTCCCACCACAGCATGTGCCAGCTTTCTTCAGGTGTGAGGCAGATGCCCTaGGTGCTGTTGCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: SYPLSLSSHHSMCQLSSGVRQMP*VLLHRS
Trigger: GGACCTGTGCAACAGCACCAAGGGCATCTGCCTCAC...ACCTGAAGAAAGCTGGCACATGCTGTGGTGGGAGCTCAAAGACAGAGGGTAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp GCAGGCTGCATGCGAAGCACATCCTCAAGGCCAGGGATCTGTCTCAAGCCTTTTCCAGTCCAAGTGAGTTaGGGTAGCAGAGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: AGCMRSTSSRPGICLKPFPVQVS*GSRAKR
Trigger: CCTCTTGGCTCTGCTACCCAAACTCACTTGGACTGG...AAAAGGCTTGAGACAGATCCCTGGCCTTGAGGATGTGCTTCGCATGCAGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp AAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCAACCGTGCCCGCAGCGTaGAGCGCCGAGAGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: KRQKQIHKSCEKSSHQESTVPAA*SAESSA
Trigger: GGCGCTGCTCTCGGCGCTCAACGCTGCGGGCACGGT...TGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR CAA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGTGTCCATCCAATCCGTaGTGTCCTGGCAACCCGCCG +
Preference number: 5 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTCPSNP*CPGNPP
Trigger: CGGCGGGTTGCCAGGACACAACGGATTGGATGGACA...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp GACGGTGTGTGCCCGTTTTCTCTGAAGCTGCCCTCTGGAACACAAGCAGGTAGGCCAAGAAGTATACCCTaGGTATCCCGGAACGCAATG +
Preference number: 5 (lower is better)
Translates to: DGVCPFSLKLPSGTQAGRPRSIP*VSRNAM
Trigger: CATTGCGTTCCGGGATACCAAGGGTATACTTCTTGG...CCTACCTGCTTGTGTTCCAGAGGGCAGCTTCAGAGAAAACGGGCACACACCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGCCGCTGTGGCTGCGCTaGTTGCGAGCTGAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVPLWLR*LRAELA
Trigger: GGCCAGCTCAGCTCGCAACAAGCGCAGCCACAGCGG...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR CAA 90 bp AAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACTGTGGCTGCGCTTGTaGCGAGCTGAGCTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: KRQKQIHKSCEKSSHQESLWLRL*RAELAG
Trigger: CCCGGCCAGCTCAGCTCGCAACAAGCGCAGCCACAG...TGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335449.11
CDS-3UTR CAA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTATGGACCGGGTGGGCCTaGGTCACCTTTGGCACCTGC +
Preference number: 5 (lower is better)
Translates to: TQATGLINSKVNLVSMWLWTGWA*VTFGTC
Trigger: GCAGGTGCCAAAGGTGACCAAGGCCCACCCGGTCCA...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CAGCCACCAAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCTGGACCGGGTGGGCCTaGGTCACCTTTGGCACCTGC +
Preference number: 5 (lower is better)
Translates to: QPPRITKLPTGTENLSHFWTGWA*VTFGTC
Trigger: GCAGGTGCCAAAGGTGACCAAGGCCCACCCGGTCCA...GAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp AATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCTCACCCTGGGCACTGGCCGTaGAACATGCTTGGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: NLSHFNFQSVAISLSGAHPGHWP*NMLGCR
Trigger: TCGGCAGCCAAGCATGTTCAACGGCCAGTGCCCAGG...GTGAGCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACAAGGCGTTGCCAGCCTaGGATTTAGGGTACGTGGTA +
Preference number: 5 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHKALPA*DLGYVV
Trigger: TACCACGTACCCTAAATCCAAGGCTGGCAACGCCTT...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp ACTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCAAGGCGTTGCCAGCCTaGGATTTAGGGTACGTGGTA +
Preference number: 5 (lower is better)
Translates to: TVGPYALCCNDSTLLLQSKALPA*DLGYVV
Trigger: TACCACGTACCCTAAATCCAAGGCTGGCAACGCCTT...GCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAAGGAGAAAGAGGTAACTaGCAGAGCCAGCTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAEGERGN*QSQLWG
Trigger: TCCCCACAGCTGGCTCTGCAAGTTACCTCTTTCTCC...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS TCA 90 bp GCCAGCCTTGGATTTAGGGTACGTGGTATTGACGTGTTGCACCACTaGGAATGTCCTCTCATCCAGTTGTGCTACAAGAATGCTCGAGCC +
Preference number: 5 (lower is better)
Translates to: ASLGFRVRGIDVLHH*ECPLIQLCYKNARA
Trigger: GGCTCGAGCATTCTTGTAGCACAACTGGATGAGAGGACATTCTCAGTGGTGCAACACGTCAATACCACGTACCCTAAATCCAAGGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CTAGAATGGTACCTGCCACACAAATATGTGCTCCATAAACAAATGCACTTTTTCCCGCTGTGGCTGCGCTaGTTGCGAGCTGAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LEWYLPHKYVLHKQMHFFPLWLR*LRAELA
Trigger: GGCCAGCTCAGCTCGCAACAAGCGCAGCCACAGCGG...GAAAAAGTGCATTTGTTTATGGAGCACATATTTGTGTGGCAGGTACCATTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTCCTGGGCACTGGCCGTaGAACATGCTTGGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVAPGHWP*NMLGCR
Trigger: TCGGCAGCCAAGCATGTTCAACGGCCAGTGCCCAGG...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp ATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGGCTGCCGAGGGCCTTaGGCTCTTCTGCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: IHYSSHWTYQLKGKFGQHGCRGP*ALLLPG
Trigger: CCCTGGAAGCAGAAGAGCCAAAGGCCCTCGGCAGCC...ATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCCCTGGGCACTGGCCGTaGAACATGCTTGGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSPGHWP*NMLGCR
Trigger: TCGGCAGCCAAGCATGTTCAACGGCCAGTGCCCAGG...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCGATCATGGATTCTGCTaGTGGGGAATGGTGTTCACT +
Preference number: 5 (lower is better)
Translates to: TVGPYALCCNDSTLLLQSDHGFC*WGMVFT
Trigger: AGTGAACACCATTCCCCACAAGCAGAATCCATGATC...GCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAATTAGGGTACGTGGTATaGACGTGTTGCACCACTGAG +
Preference number: 5 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAELGYVV*TCCTTE
Trigger: CTCAGTGGTGCAACACGTCAATACCACGTACCCTAA...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAAAAAACAAGTTTCCTGTaGGGGGAGAACTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAEKTSFL*GENWSQ
Trigger: CTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTTT...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGGGCCTAGCTTTGAGGTaGGGAGGGATGGTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTGLALR*GGMVLF
Trigger: AAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCC...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS GCA 90 bp AAGGCGTTGCCAGCCTTGGATTTAGGGTACGTGGTATTGACGTGTTaGACCACTGAGAATGTCCTCTCATCCAGTTGTGCTACAAGAATG +
Preference number: 5 (lower is better)
Translates to: KALPALDLGYVVLTC*TTENVLSSSCATRM
Trigger: CATTCTTGTAGCACAACTGGATGAGAGGACATTCTCAGTGGTGCAACACGTCAATACCACGTACCCTAAATCCAAGGCTGGCAACGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCGTGAGGCAGATGCCCTaGGTGCTGTTGCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSVRQMP*VLLHRS
Trigger: GGACCTGTGCAACAGCACCAAGGGCATCTGCCTCAC...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCTGTCCATCCAATCCGTaGTGTCCTGGCAACCCGCCG +
Preference number: 5 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSCPSNP*CPGNPP
Trigger: CGGCGGGTTGCCAGGACACAACGGATTGGATGGACA...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTGTCCATCCAATCCGTaGTGTCCTGGCAACCCGCCG +
Preference number: 5 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNCPSNP*CPGNPP
Trigger: CGGCGGGTTGCCAGGACACAACGGATTGGATGGACA...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp AAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAGGCTGCCGAGGGCCTTaGGCTCTTCTGCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: KNHQITYRYRKSQPFQLPGCRGP*ALLLPG
Trigger: CCCTGGAAGCAGAAGAGCCAAAGGCCCTCGGCAGCC...TGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp CTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCATTCAAGCTTCAGAGTTaGGGATGTTTCCTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: LWGHMLFVAMTRLCCCRAFKLQS*GCFLAK
Trigger: TTTGGCCAGGAAACATCCCAAACTCTGAAGCTTGAA...TGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp AGAAAATCTCAGCCATTTCAACTTCCAATCTGTTGCTATTTCACTAAGCGGGGCCGGGCAATGAAGGCGTaGCCAGCCTTGGATTTAGGG +
Preference number: 5 (lower is better)
Translates to: RKSQPFQLPICCYFTKRGRAMKA*PALDLG
Trigger: CCCTAAATCCAAGGCTGGCAACGCCTTCATTGCCCG...GCCCCGCTTAGTGAAATAGCAACAGATTGGAAGTTGAAATGGCTGAGATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGACAACAAACAAGTCATaGACAGCTGCCTGGGGACTT +
Preference number: 5 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTTTNKS*TAAWGL
Trigger: AAGTCCCCAGGCAGCTGTCAATGACTTGTTTGTTGT...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCCAGGAGCACGTCGTaGGACACATCTCCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVARSTS*DTSPLS
Trigger: TGACAAAGGAGATGTGTCCAACGACGTGCTCCTGGC...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAGCCAGGAGCACGTCGTaGGACACATCTCCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQARSTS*DTSPLS
Trigger: TGACAAAGGAGATGTGTCCAACGACGTGCTCCTGGC...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCATCCGGTCATCACTCTaGTTAGCAGACTCTCTTATC +
Preference number: 5 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSIRSSL*LADSLI
Trigger: GATAAGAGAGTCTGCTAACAAGAGTGATGACCGGAT...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp TGGCCTAGCTTTGAGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTTCAAGCTTCAGAGTTaGGGATGTTTCCTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: WPSFEVGRDGFVYFPVGSFKLQS*GCFLAK
Trigger: TTTGGCCAGGAAACATCCCAAACTCTGAAGCTTGAA...GCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATCGGGCAATGAAGGCGTaGCCAGCCTTGGATTTAGGG +
Preference number: 5 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNRAMKA*PALDLG
Trigger: CCCTAAATCCAAGGCTGGCAACGCCTTCATTGCCCG...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTAAGCTGTCCCTGGCTTTaGCTAATCTCAGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TQATGLINSKVNLVSMWLSCPWL*LISELP
Trigger: GGGCAGCTCTGAGATTAGCAAAAGCCAGGGACAGCT...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTATCCCCTAACCAGCCTTaGTGGAGGGCCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: TQATGLINSKVNLVSMWLSPNQP*WRATSS
Trigger: AGATGAAGTGGCCCTCCACAAAGGCTGGTTAGGGGA...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp AAGCTAAACGACAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGTCCCCTAACCAGCCTTaGTGGAGGGCCACTTCATCT +
Preference number: 5 (lower is better)
Translates to: KLNDRSRYIKVVRRAATKSPNQP*WRATSS
Trigger: AGATGAAGTGGCCCTCCACAAAGGCTGGTTAGGGGA...CTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTGTCGTTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp AGCCTCTCTTCTGAACACTGCAAAGTGCTTCCCATGGTTCCAGCCAGATTAACGTTGGGAGGGATGGTTTaGTTTACTTTCCAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: SLSSEHCKVLPMVPARLTLGGMV*FTFQWE
Trigger: TTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAA...CGTTAATCTGGCTGGAACCATGGGAAGCACTTTGCAGTGTTCAGAAGAGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp GGGTGCGAGTCAGTTCCCAGGAGACGGCTTCTCCAGTTTGAAATAAACATCTGTTTCCACTCAAGCAGTTaGAGCTATTCCTCTAGCCAA +
Preference number: 5 (lower is better)
Translates to: GCESVPRRRLLQFEINICFHSSS*SYSSSQ
Trigger: TTGGCTAGAGGAATAGCTCAAACTGCTTGAGTGGAA...ACAGATGTTTATTTCAAACTGGAGAAGCCGTCTCCTGGGAACTGACTCGCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp GGCCTTCGTAGGAGCCTCCTGAGTAGTTTCTTACCCTCTGTCTTTGAGCTCCCATGGCCCTTACTTCAATaGCTAATGAGAATAAGAGTG +
Preference number: 5 (lower is better)
Translates to: GLRRSLLSSFLPSVFELPWPLLQ*LMRIRV
Trigger: CACTCTTATTCTCATTAGCAATTGAAGTAAGGGCCA...TGGGAGCTCAAAGACAGAGGGTAAGAAACTACTCAGGAGGCTCCTACGAAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp AAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAGTGAGGCAGATGCCCTaGGTGCTGTTGCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: KNHQITYRYRKSQPFQLPVRQMP*VLLHRS
Trigger: GGACCTGTGCAACAGCACCAAGGGCATCTGCCTCAC...TGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCGCCAGGAGCACGTCGTaGGACACATCTCCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSARSTS*DTSPLS
Trigger: TGACAAAGGAGATGTGTCCAACGACGTGCTCCTGGC...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACAGCTGTCCCTGGCTTTaGCTAATCTCAGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: IKVVRRAATKNHQITYRYSCPWL*LISELP
Trigger: GGGCAGCTCTGAGATTAGCAAAAGCCAGGGACAGCT...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGACCAGAACCACCTACTaGGCTTCAGGAGGACACCTT +
Preference number: 5 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQTRTTY*ASGGHL
Trigger: AAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGT...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACATCGTTATTCATTTGTaGTTCAGGATCTGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHIVIHL*FRICAG
Trigger: ACCTGCACAGATCCTGAACAACAAATGAATAACGAT...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTATTAGGGTACGTGGTATaGACGTGTTGCACCACTGAG +
Preference number: 5 (lower is better)
Translates to: TQATGLINSKVNLVSMWLLGYVV*TCCTTE
Trigger: CTCAGTGGTGCAACACGTCAATACCACGTACCCTAA...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CAGCCACCAAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCTTAGGGTACGTGGTATaGACGTGTTGCACCACTGAG +
Preference number: 5 (lower is better)
Translates to: QPPRITKLPTGTENLSHFLGYVV*TCCTTE
Trigger: CTCAGTGGTGCAACACGTCAATACCACGTACCCTAA...GAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTCGGGCAATGAAGGCGTaGCCAGCCTTGGATTTAGGG +
Preference number: 5 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGRAMKA*PALDLG
Trigger: CCCTAAATCCAAGGCTGGCAACGCCTTCATTGCCCG...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGAAAACAAGTTTCCTGTaGGGGGAGAACTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVKTSFL*GENWSQ
Trigger: CTGGGACCAGTTCTCCCCCAACAGGAAACTTGTTTT...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTGACTCGACTCTGCTGTaGCAGAGCAAAAGCAATGTC +
Preference number: 5 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVADSTLL*QSKSNV
Trigger: GACATTGCTTTTGCTCTGCAACAGCAGAGTCGAGTC...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp AGAACTGGTCCCAGAAAACCCCTGAAATTTGCTGAAGGGAGCCGAATGCAGCACAGAGAATTATCTGGTTaGATTCTGACATCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: RTGPRKPLKFAEGSRMQHRELSG*ILTSEV
Trigger: CACTTCTGATGTCAGAATCAAACCAGATAATTCTCT...GTGCTGCATTCGGCTCCCTTCAGCAAATTTCAGGGGTTTTCTGGGACCAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGAGGCCTAGCTTTGAGGTaGGGAGGGATGGTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRGLALR*GGMVLF
Trigger: AAACAAAACCATCCCTCCCAACCTCAAAGCTAGGCC...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp GGTGAGCATGATCCCTTACTCACAAGTAAGGGAGCCCAGATAGCTCAGATATCATCATTTCTCCTTCACTaGCCATCAGATGATCATAGC +
Preference number: 5 (lower is better)
Translates to: GEHDPLLTSKGAQIAQISSFLLH*PSDDHS
Trigger: GCTATGATCATCTGATGGCAAGTGAAGGAGAAATGA...TGATATCTGAGCTATCTGGGCTCCCTTACTTGTGAGTAAGGGATCATGCTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp CTGTGGGGCCATATGCTCTTTGTTGCAATGACTCGACTCTGCTGTTGCAGAGCATTCATCGTTATTCATTaGTTGTTCAGGATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: LWGHMLFVAMTRLCCCRAFIVIH*LFRICA
Trigger: TGCACAGATCCTGAACAACAAATGAATAACGATGAA...TGCTCTGCAACAGCAGAGTCGAGTCATTGCAACAAAGAGCATATGGCCCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAATGTCCTCTCATCCAGTaGTGCTACAAGAATGCTCGA +
Preference number: 5 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQCPLIQ*CYKNAR
Trigger: TCGAGCATTCTTGTAGCACAACTGGATGAGAGGACA...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGTGTCCTCTCATCCAGTaGTGCTACAAGAATGCTCGA +
Preference number: 5 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVCPLIQ*CYKNAR
Trigger: TCGAGCATTCTTGTAGCACAACTGGATGAGAGGACA...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp ACTTGGAGACCAGAACCACCTACTTGGCTTCAGGAGGACACCTTATCAGCTGAAAAATCAAAGTTTGCATaGATCTGTTTCCCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: TWRPEPPTWLQEDTLSAEKSKFA*ICFPPN
Trigger: GTTAGGAGGGAAACAGATCAATGCAAACTTTGATTT...TTCAGCTGATAAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGTCTCCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTGGAGAAAGAGGTAACTaGCAGAGCCAGCTGTGGGGA +
Preference number: 5 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGGERGN*QSQLWG
Trigger: TCCCCACAGCTGGCTCTGCAAGTTACCTCTTTCTCC...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACTTGCAGAGCCAGCTGTGGGGAGATCACCAAATCTCAGCCATTTCAACTTCCACAGAATACACACAAATaGGGACAAGTTGCTGAAAAA +
Preference number: 5 (lower is better)
Translates to: TCRASCGEITKSQPFQLPQNTHK*GQVAEK
Trigger: TTTTTCAGCAACTTGTCCCAATTTGTGTGTATTCTG...TGGAAGTTGAAATGGCTGAGATTTGGTGATCTCCCCACAGCTGGCTCTGCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAACAACAAACAAGTCATaGACAGCTGCCTGGGGACTT +
Preference number: 5 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQTTNKS*TAAWGL
Trigger: AAGTCCCCAGGCAGCTGTCAATGACTTGTTTGTTGT...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTACCAGAACCACCTACTaGGCTTCAGGAGGACACCTT +
Preference number: 5 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFTRTTY*ASGGHL
Trigger: AAGGTGTCCTCCTGAAGCCAAGTAGGTGGTTCTGGT...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp TATTTATTTATCTTATTTATTATCCGTCTCTCCCAGCTAGGATGTAAGCCTCGTTCAGAATCTTCCCCTTaGTGCCCCAGCCTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: YLFILFIIRLSQLGCKPRSESSP*CPSLLP
Trigger: TGGCAGGAGGCTGGGGCACAAAGGGGAAGATTCTGA...ACGAGGCTTACATCCTAGCTGGGAGAGACGGATAATAAATAAGATAAATAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACGATCATGGATTCTGCTaGTGGGGAATGGTGTTCACT +
Preference number: 5 (lower is better)
Translates to: IKVVRRAATKNHQITYRYDHGFC*WGMVFT
Trigger: AGTGAACACCATTCCCCACAAGCAGAATCCATGATC...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CAGAAGCAGATACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATGATCATGGATTCTGCTaGTGGGGAATGGTGTTCACT +
Preference number: 5 (lower is better)
Translates to: QKQIHKSCEKSSHQESPNDHGFC*WGMVFT
Trigger: AGTGAACACCATTCCCCACAAGCAGAATCCATGATC...ATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTATCTGCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAATCCGGTCATCACTCTaGTTAGCAGACTCTCTTATC +
Preference number: 5 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQIRSSL*LADSLI
Trigger: GATAAGAGAGTCTGCTAACAAGAGTGATGACCGGAT...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp GGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGATCCGGTCATCACTCTaGTTAGCAGACTCTCTTATC +
Preference number: 5 (lower is better)
Translates to: GIHYSSHWTYQLKGKFGQIRSSL*LADSLI
Trigger: GATAAGAGAGTCTGCTAACAAGAGTGATGACCGGAT...CTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGTTCAAGCTTCAGAGTTaGGGATGTTTCCTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVFKLQS*GCFLAK
Trigger: TTTGGCCAGGAAACATCCCAAACTCTGAAGCTTGAA...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp AAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAAAGGCGTTGCCAGCCTaGGATTTAGGGTACGTGGTA +
Preference number: 5 (lower is better)
Translates to: KNHQITYRYRKSQPFQLPKALPA*DLGYVV
Trigger: TACCACGTACCCTAAATCCAAGGCTGGCAACGCCTT...TGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp AAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCACCCCAGAACTTTTTGACTCGACTCTGCTGTaGCAGAGCAAAAGCAATGTC +
Preference number: 5 (lower is better)
Translates to: KMPKIRTPHLKTSTPELFDSTLL*QSKSNV
Trigger: GACATTGCTTTTGCTCTGCAACAGCAGAGTCGAGTC...AAAAAGTTCTGGGGTGGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp AGGTTGGGAGGGATGGTTTTGTTTACTTTCCAGTGGGAAGCTATCTACTTTAGATTGGGAGGGATGGTTTaGTTTACTTTCCAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: RLGGMVLFTFQWEAIYFRLGGMV*FTFQWE
Trigger: TTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAA...TCTAAAGTAGATAGCTTCCCACTGGAAAGTAAACAAAACCATCCCTCCCAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACCCAAGGTATCATCATTaGGTATGGCACAAGTCTCAC +
Preference number: 5 (lower is better)
Translates to: IKVVRRAATKNHQITYRYPRYHH*VWHKSH
Trigger: GTGAGACTTGTGCCATACCAAATGATGATACCTTGG...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CACCTTGTGACTGTTAAGATGCCTAAGATCAGAACTCCTCATCTTAAAACTTCCCCAAGGTATCATCATTaGGTATGGCACAAGTCTCAC +
Preference number: 5 (lower is better)
Translates to: HLVTVKMPKIRTPHLKTSPRYHH*VWHKSH
Trigger: GTGAGACTTGTGCCATACCAAATGATGATACCTTGG...GGAAGTTTTAAGATGAGGAGTTCTGATCTTAGGCATCTTAACAGTCACAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp CATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTATGTCACTTTCAGTACTaGCACTGGGTTTCCAATGGA +
Preference number: 5 (lower is better)
Translates to: HKSCEKSSHQESPNYLQVCHFQY*HWVSNG
Trigger: TCCATTGGAAACCCAGTGCAAGTACTGAAAGTGACA...TACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACTGTCACTTTCAGTACTaGCACTGGGTTTCCAATGGA +
Preference number: 5 (lower is better)
Translates to: IKVVRRAATKNHQITYRYCHFQY*HWVSNG
Trigger: TCCATTGGAAACCCAGTGCAAGTACTGAAAGTGACA...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp CACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGACAGCATTTAGTACTTaGATAGTGGATCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: HYSSHWTYQLKGKFGQHVTAFST*IVDPQE
Trigger: CTCCTGTGGATCCACTATCAAAGTACTAAATGCTGT...CACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAACAGCATTTAGTACTTaGATAGTGGATCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQTAFST*IVDPQE
Trigger: CTCCTGTGGATCCACTATCAAAGTACTAAATGCTGT...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp TACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTTCATTTCTCCTTCACTaGCCATCAGATGATCATAGC +
Preference number: 5 (lower is better)
Translates to: YSSHWTYQLKGKFGQHVASFLLH*PSDDHS
Trigger: GCTATGATCATCTGATGGCAAGTGAAGGAGAAATGA...AGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATGTGGCTACAGGATCTGTGCAGGTaGGAAATTATGGCTCTTAAT +
Preference number: 5 (lower is better)
Translates to: TQATGLINSKVNLVSMWLQDLCR*EIMALN
Trigger: ATTAAGAGCCATAATTTCCAACCTGCACAGATCCTG...TAGCCACATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ACCTTACCCCTGCTGCACACAGTTTTAGTCGACCCAAATGCAATCATGGAGATATATATGAACGATCCATaGCTGCTGTGTAATTCCAAT +
Preference number: 5 (lower is better)
Translates to: TLPLLHTVLVDPNAIMEIYMNDP*LLCNSN
Trigger: ATTGGAATTACACAGCAGCAATGGATCGTTCATATA...TATCTCCATGATTGCATTTGGGTCGACTAAAACTGTGTGCAGCAGGGGTAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560215.5
CDS-3UTR CAA 90 bp AAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAATCTGTTGCTTGTCCTCTCATCCAGTaGTGCTACAAGAATGCTCGA +
Preference number: 5 (lower is better)
Translates to: KLPTGTENLSHFNFQSVACPLIQ*CYKNAR
Trigger: TCGAGCATTCTTGTAGCACAACTGGATGAGAGGACA...AGCAACAGATTGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp AAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCACCAAGGTATCATCATTaGGTATGGCACAAGTCTCAC +
Preference number: 5 (lower is better)
Translates to: KNHQITYRYRKSQPFQLPPRYHH*VWHKSH
Trigger: GTGAGACTTGTGCCATACCAAATGATGATACCTTGG...TGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp AAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAATCTGTTGCTTGTCACTTTCAGTACTaGCACTGGGTTTCCAATGGA +
Preference number: 5 (lower is better)
Translates to: KLPTGTENLSHFNFQSVACHFQY*HWVSNG
Trigger: TCCATTGGAAACCCAGTGCAAGTACTGAAAGTGACA...AGCAACAGATTGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp TATAAGTCAGCACTGAGGGATTCACTACTCAAGCCACTGGACTTATCAACTCAAAAATCAAAGTTTGCATaGATCTGTTTCCCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: YKSALRDSLLKPLDLSTQKSKFA*ICFPPN
Trigger: GTTAGGAGGGAAACAGATCAATGCAAACTTTGATTT...TTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAATCCCTCAGTGCTGACTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp ATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTACATCGTTATTCATTTGTaGTTCAGGATCTGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: IKVVRRAATKNHQITYRYIVIHL*FRICAG
Trigger: ACCTGCACAGATCCTGAACAACAAATGAATAACGAT...GTACCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGCAGAATACACACAAATaGGGACAAGTTGCTGAAAAA +
Preference number: 5 (lower is better)
Translates to: YIKVVRRAATKNHQITYRQNTHK*GQVAEK
Trigger: TTTTTCAGCAACTTGTCCCAATTTGTGTGTATTCTG...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp TACATAAAAGTTGTGAGAAGAGCAGCCACCAAGAATCACCAAATTACCTACAGGTTCATCGTTATTCATTaGTTGTTCAGGATCTGTGCA +
Preference number: 5 (lower is better)
Translates to: YIKVVRRAATKNHQITYRFIVIH*LFRICA
Trigger: TGCACAGATCCTGAACAACAAATGAATAACGATGAA...CCTGTAGGTAATTTGGTGATTCTTGGTGGCTGCTCTTCTCACAACTTTTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS-3UTR CAA 90 bp ATTCACTACTCAAGCCACTGGACTTATCAACTCAAAGGTAAATTTGGTCAGCATAACTCAAAGGTAAATTaGGTCAGCATGTGGCTAAAA +
Preference number: 5 (lower is better)
Translates to: IHYSSHWTYQLKGKFGQHNSKVN*VSMWLK
Trigger: TTTTAGCCACATGCTGACCAAATTTACCTTTGAGTT...ATGCTGACCAAATTTACCTTTGAGTTGATAAGTCCAGTGGCTTGAGTAGTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS-3UTR CAA 90 bp AAGAATCACCAAATTACCTACAGGTACAGAAAATCTCAGCCATTTCAACTTCCAAACTCAAAGGTAAATTaGGTCAGCATGTGGCTAAAA +
Preference number: 5 (lower is better)
Translates to: KNHQITYRYRKSQPFQLPNSKVN*VSMWLK
Trigger: TTTTAGCCACATGCTGACCAAATTTACCTTTGAGTT...TGGAAGTTGAAATGGCTGAGATTTTCTGTACCTGTAGGTAATTTGGTGATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612989.1
CDS-3UTR CAA 90 bp ACAACCAAAAAGACATTCATCGTTATTCATTTGTTGTTCAGGATCTGTGCAGGTAGAGAATTATCTGGTTaGATTCTGACATCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: TTKKTFIVIHLLFRICAGRELSG*ILTSEV
Trigger: CACTTCTGATGTCAGAATCAAACCAGATAATTCTCT...ACCTGCACAGATCCTGAACAACAAATGAATAACGATGAATGTCTTTTTGGTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000396399.6
CDS GCA 72 bp CGCAGGGCACTGTCCTCGCGCTGCTCCCGGCCCCGCTaGGCCTCCAAAGCCCGCAGCGCCGAGCTCAGCCCG +
Preference number: 6 (lower is better)
Translates to: RRALSSRCSRPR*ASKARSAELSP
Trigger: CGGGCTGAGCTCGGCGCTGCGGGCTTTGGAGGCGCAGCGGGGCCGGGAGCAGCGCGAGGACAGTGCCCTGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335449.11
ENST00000560215.5
CDS CCA 72 bp TGGCTGCGCTTGTTGCGAGCTGAGCTGGCCGGGTCTTaGGGTGGTGCGGACGCCCCGCGCGGCGCGCGGCTC +
Preference number: 6 (lower is better)
Translates to: WLRLLRAELAGS*GGADAPRGARL
Trigger: GAGCCGCGCGCCGCGCGGGGCGTCCGCACCACCCCAAGACCCGGCCAGCTCAGCTCGCAACAAGCGCAGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000558286.5
ENST00000560215.5
CDS TCA 72 bp CGCGGGCTCGCCGCTGTGGCTGCGCTTGTTGCGAGCTaGGCTGGCCGGGTCTTGGGGTGGTGCGGACGCCCC +
Preference number: 6 (lower is better)
Translates to: RGLAAVAALVAS*AGRVLGWCGRP
Trigger: GGGGCGTCCGCACCACCCCAAGACCCGGCCAGCTCAGCTCGCAACAAGCGCAGCCACAGCGGCGAGCCCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000558286.5
ENST00000560215.5
CDS GCA 72 bp CGGCGCGGATATGCGGCGCGGGCTCGCCGCTGTGGCTaGGCTTGTTGCGAGCTGAGCTGGCCGGGTCTTGGG +
Preference number: 6 (lower is better)
Translates to: RRGYAARARRCG*ACCELSWPGLG
Trigger: CCCAAGACCCGGCCAGCTCAGCTCGCAACAAGCGCAGCCACAGCGGCGAGCCCGCGCCGCATATCCGCGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000558286.5
ENST00000560215.5
CDS CCA 72 bp CTGAGGACCAGGCTGTCCATCCAATCCGTTGTGTCCTaGCAACCCGCCGGCTCCCGGAGGTCCTGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: LRTRLSIQSVVS*QPAGSRRSWWS
Trigger: GGACCACCAGGACCTCCGGGAGCCGGCGGGTTGCCAGGACACAACGGATTGGATGGACAGCCTGGTCCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000464150.2
ENST00000558286.5
ENST00000558426.5
ENST00000559317.5
ENST00000560215.5
ENST00000560690.5
ENST00000612989.1
CDS GCA 72 bp CTCTGGCCCAGTGAACCTTCGCCCTCGGGGGCAGTGTaGCTTCCAGTGATCCCCCTGGCACAAGGGACATGG +
Preference number: 6 (lower is better)
Translates to: LWPSEPSPSGAV*LPVIPLAQGTW
Trigger: CCATGTCCCTTGTGCCAGGGGGATCACTGGAAGGCACACTGCCCCCGAGGGCGAAGGTTCACTGGGCCAGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS CCA 72 bp CTGAGGACCAGGCTGTCCATCCAATCCGTTGTGTCCTaGCAACCCGCCGGCTCCCGGAGGTCCTGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: LRTRLSIQSVVS*QPAGSRRSCEA
Trigger: TGCCTCACAGGACCTCCGGGAGCCGGCGGGTTGCCAGGACACAACGGATTGGATGGACAGCCTGGTCCTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561194.1
CDS CCA 72 bp GGATCTGGGGCTCTCTGTGATGGTGATGGCATGGGTTaGTGCCTGCCCCGGGCACCCTCAGTCCTGTTGTGG +
Preference number: 6 (lower is better)
Translates to: GSGALCDGDGMG*CLPRAPSVLLW
Trigger: CCACAACAGGACTGAGGGTGCCCGGGGCAGGCACCAACCCATGCCATCACCATCACAGAGAGCCCCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS GCA 72 bp TCTGGGGCTCTCTGTGATGGTGATGGCATGGGTTGGTaGCTGCCCCGGGCACCCTCAGTCCTGTTGTGGTAC +
Preference number: 6 (lower is better)
Translates to: SGALCDGDGMGW*LPRAPSVLLWY
Trigger: GTACCACAACAGGACTGAGGGTGCCCGGGGCAGGCACCAACCCATGCCATCACCATCACAGAGAGCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS CCA 72 bp TGCCCCGGGCACCCTCAGTCCTGTTGTGGTACCATCTaGTTAGTGGCCTCTGGCCCAGTGAACCTTCGCCCT +
Preference number: 6 (lower is better)
Translates to: CPGHPQSCCGTI*LVASGPVNLRP
Trigger: AGGGCGAAGGTTCACTGGGCCAGAGGCCACTAACCAGATGGTACCACAACAGGACTGAGGGTGCCCGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS CCA 72 bp TCAGTCCTGTTGTGGTACCATCTGGTTAGTGGCCTCTaGCCCAGTGAACCTTCGCCCTCGGGGGCAGTGTGC +
Preference number: 6 (lower is better)
Translates to: SVLLWYHLVSGL*PSEPSPSGAVC
Trigger: GCACACTGCCCCCGAGGGCGAAGGTTCACTGGGCCAGAGGCCACTAACCAGATGGTACCACAACAGGACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS CCA 72 bp CGCCACGGGGAACAGAGACCCCGCCTACCGGCACCATaGAGTAGGTCATCATCATCAGCATGTCATGGCTCT +
Preference number: 6 (lower is better)
Translates to: RHGEQRPRLPAP*SRSSSSACHGS
Trigger: AGAGCCATGACATGCTGATGATGATGACCTACTCCATGGTGCCGGTAGGCGGGGTCTCTGTTCCCCGTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560690.5
CDS TCA 72 bp TTGGTATGGCACAAGTCTCACCTGGGCACTGGCCGTTaGACATGCTTGGCTGCCGAGGGCCTTTGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: LVWHKSHLGTGR*TCLAAEGLWLF
Trigger: GAAGAGCCAAAGGCCCTCGGCAGCCAAGCATGTTCAACGGCCAGTGCCCAGGTGAGACTTGTGCCATACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS CAA 72 bp TTTGGTATGGCACAAGTCTCACCTGGGCACTGGCCGTaGAACATGCTTGGCTGCCGAGGGCCTTTGGCTCTT +
Preference number: 6 (lower is better)
Translates to: FGMAQVSPGHWP*NMLGCRGPLAL
Trigger: AAGAGCCAAAGGCCCTCGGCAGCCAAGCATGTTCAACGGCCAGTGCCCAGGTGAGACTTGTGCCATACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS CCA 72 bp AGAGGGTCATCAGAGCAGACAGTGGGCAGCAGGCCCTaGGCTCATCCTTTATTCAGACGAGCAGAAAGCAAT +
Preference number: 6 (lower is better)
Translates to: RGSSEQTVGSRP*AHPLFRRAESN
Trigger: ATTGCTTTCTGCTCGTCTGAATAAAGGATGAGCCCAGGGCCTGCTGCCCACTGTCTGCTCTGATGACCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464150.2
ENST00000558426.5
ENST00000561194.1
CDS CAA 72 bp CCCTGGCACAAGGGACATGGACGAGGGGGCAGCTTATaGTTTGGGCAGTCCTTTTTGAAGTGGTCCTGTAAG +
Preference number: 6 (lower is better)
Translates to: PWHKGHGRGGSL*FGQSFLKWSCK
Trigger: CTTACAGGACCACTTCAAAAAGGACTGCCCAAACAATAAGCTGCCCCCTCGTCCATGTCCCTTGTGCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS CAA 90 bp CGGGCAATGAAGGCGTTGCCAGCCTTGGATTTAGGGTACGTGGTATaGACGTGTTGCACCACTGAGAATGTCCTCTCATCCAGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: RAMKALPALDLGYVV*TCCTTENVLSSSCA
Trigger: AGCACAACTGGATGAGAGGACATTCTCAGTGGTGCAACACGTCAATACCACGTACCCTAAATCCAAGGCTGGCAACGCCTTCATTGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS CAA 72 bp AAGGCGTTGCCAGCCTTGGATTTAGGGTACGTGGTATaGACGTGTTGCACCACTGAGAATGTCCTCTCATCC +
Preference number: 6 (lower is better)
Translates to: KALPALDLGYVV*TCCTTENVLSS
Trigger: GGATGAGAGGACATTCTCAGTGGTGCAACACGTCAATACCACGTACCCTAAATCCAAGGCTGGCAACGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS TCA 72 bp CGTGCCCACAGCCATGGAAATAGTATGGAAGGTGGATaGACGTGTAACTGCCATTCAGAAGTGAGGGCTGAT +
Preference number: 6 (lower is better)
Translates to: RAHSHGNSMEGG*TCNCHSEVRAD
Trigger: ATCAGCCCTCACTTCTGAATGGCAGTTACACGTTCATCCACCTTCCATACTATTTCCATGGCTGTGGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS GCA 72 bp CCAGCCTTGGATTTAGGGTACGTGGTATTGACGTGTTaGACCACTGAGAATGTCCTCTCATCCAGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: PALDLGYVVLTC*TTENVLSSSCA
Trigger: AGCACAACTGGATGAGAGGACATTCTCAGTGGTGCAACACGTCAATACCACGTACCCTAAATCCAAGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS GCA 72 bp GCCACACTGATAATAAGCTCTGTTAGGCGGGTTGCCTaGCCAGCCTTTCTTTCTTTCAGAACCACCGAAGTT +
Preference number: 6 (lower is better)
Translates to: ATLIISSVRRVA*PAFLSFRTTEV
Trigger: AACTTCGGTGGTTCTGAAAGAAAGAAAGGCTGGGCAGGCAACCCGCCTAACAGAGCTTATTATCAGTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559317.5
CDS CAA 72 bp CTTTCTCATCAGCTTTTCCAACCAAGGTATCATCATTaGGTATGGCACAAGTCTCACCTGGGCACTGGCCGT +
Preference number: 6 (lower is better)
Translates to: LSHQLFQPRYHH*VWHKSHLGTGR
Trigger: ACGGCCAGTGCCCAGGTGAGACTTGTGCCATACCAAATGATGATACCTTGGTTGGAAAAGCTGATGAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS TCA 72 bp TGGAAGGTGGATGAACGTGTAACTGCCATTCAGAAGTaGGGGCTGATCCTTGAATTCCTTAACCATGATGCC +
Preference number: 6 (lower is better)
Translates to: WKVDERVTAIQK*GLILEFLNHDA
Trigger: GGCATCATGGTTAAGGAATTCAAGGATCAGCCCTCACTTCTGAATGGCAGTTACACGTTCATCCACCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS TCA 72 bp CAGTTGTGCTACAAGAATGCTCGAGCCGTCCACACTTaGCGCATAGATAATCCAAAGGCCCTTTTCATCTAC +
Preference number: 6 (lower is better)
Translates to: QLCYKNARAVHT*RIDNPKALFIY
Trigger: GTAGATGAAAAGGGCCTTTGGATTATCTATGCGTCAAGTGTGGACGGCTCGAGCATTCTTGTAGCACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS CCA 72 bp TTTCTCATCAGCTTTTCCAACCAAGGTATCATCATTTaGTATGGCACAAGTCTCACCTGGGCACTGGCCGTT +
Preference number: 6 (lower is better)
Translates to: FLISFSNQGIII*YGTSLTWALAV
Trigger: AACGGCCAGTGCCCAGGTGAGACTTGTGCCATACCAAATGATGATACCTTGGTTGGAAAAGCTGATGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS TCA 72 bp GGATTTAGGGTACGTGGTATTGACGTGTTGCACCACTaGGAATGTCCTCTCATCCAGTTGTGCTACAAGAAT +
Preference number: 6 (lower is better)
Translates to: GFRVRGIDVLHH*ECPLIQLCYKN
Trigger: ATTCTTGTAGCACAACTGGATGAGAGGACATTCTCAGTGGTGCAACACGTCAATACCACGTACCCTAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS CCA 72 bp GTTGTAAACAACGTGCCCACAGCCATGGAAATAGTATaGAAGGTGGATGAACGTGTAACTGCCATTCAGAAG +
Preference number: 6 (lower is better)
Translates to: VVNNVPTAMEIV*KVDERVTAIQK
Trigger: CTTCTGAATGGCAGTTACACGTTCATCCACCTTCCATACTATTTCCATGGCTGTGGGCACGTTGTTTACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS CAA 90 bp ATGATGCCTGAAAAATGCTCTGTCACCCAAATCCGGTCATCACTCTaGTTAGCAGACTCTCTTATCCAAGTCCCAAATGTCTCTGTCACT +
Preference number: 6 (lower is better)
Translates to: MMPEKCSVTQIRSSL*LADSLIQVPNVSVT
Trigger: AGTGACAGAGACATTTGGGACTTGGATAAGAGAGTCTGCTAACAAGAGTGATGACCGGATTTGGGTGACAGAGCATTTTTCAGGCATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS CAA 72 bp GAAAAATGCTCTGTCACCCAAATCCGGTCATCACTCTaGTTAGCAGACTCTCTTATCCAAGTCCCAAATGTC +
Preference number: 6 (lower is better)
Translates to: EKCSVTQIRSSL*LADSLIQVPNV
Trigger: GACATTTGGGACTTGGATAAGAGAGTCTGCTAACAAGAGTGATGACCGGATTTGGGTGACAGAGCATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS GCA 72 bp ATCCAAGTCCCAAATGTCTCTGTCACTTTCAGTACTTaGACTGGGTTTCCAATGGAAGTGATCATGGATTCT +
Preference number: 6 (lower is better)
Translates to: IQVPNVSVTFST*TGFPMEVIMDS
Trigger: AGAATCCATGATCACTTCCATTGGAAACCCAGTGCAAGTACTGAAAGTGACAGAGACATTTGGGACTTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS CAA 90 bp AACATGGCAAGAACAGACTGGGAAGTTCTTAAATCAAAGTTTGCATaGATCTGTTTCCCTCCTAACAAATCAAAGGCAAATGTGACCCTC +
Preference number: 6 (lower is better)
Translates to: NMARTDWEVLKSKFA*ICFPPNKSKANVTL
Trigger: GAGGGTCACATTTGCCTTTGATTTGTTAGGAGGGAAACAGATCAATGCAAACTTTGATTTAAGAACTTCCCAGTCTGTTCTTGCCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS TCA 72 bp GAACAGACTGGGAAGTTCTTAAATCAAAGTTTGCATTaGTCTGTTTCCCTCCTAACAAATCAAAGGCAAATG +
Preference number: 6 (lower is better)
Translates to: EQTGKFLNQSLH*SVSLLTNQRQM
Trigger: CATTTGCCTTTGATTTGTTAGGAGGGAAACAGATCAATGCAAACTTTGATTTAAGAACTTCCCAGTCTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1
CDS CAA 72 bp AGAACAGACTGGGAAGTTCTTAAATCAAAGTTTGCATaGATCTGTTTCCCTCCTAACAAATCAAAGGCAAAT +
Preference number: 6 (lower is better)
Translates to: RTDWEVLKSKFA*ICFPPNKSKAN
Trigger: ATTTGCCTTTGATTTGTTAGGAGGGAAACAGATCAATGCAAACTTTGATTTAAGAACTTCCCAGTCTGTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335449.11
ENST00000396399.6
ENST00000612989.1