Pregenerated sensors for GLDC (Homo sapiens)
Ensembl gene IDs: ENSG00000178445Ensembl transcript IDs: ENST00000321612.8, ENST00000460457.2, ENST00000638233.1, ENST00000639318.1, ENST00000639364.1, ENST00000639461.1, ENST00000639639.1, ENST00000639840.1, ENST00000639954.1, ENST00000640592.1, ENST00000640703.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGATGTGAGGAGCACCTCTGCCTGGCCGCGACCCCGTCTGGGAGGTaGGGAACGTCTCCGCCCGGCAGCCACCCCGTCCGGGAGGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: GCEEHLCLAATPSGR*GTSPPGSHPVREGG Trigger: ACCTCCCTCCCGGACGGGGTGGCTGCCGGGCGGAGACGTTCCTCACCTCCCAGACGGGGTCGCGGCCAGGCAGAGGTGCTCCTCACATCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639840.1 |
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| CDS GCA 90 bp | GCCTCTTCCGGGCCGCCATCCCATCTAGGAAGTGAGGAGCGTCTCTaGCCGGCCGCCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: ASSGPPSHLGSEERL*PAAHRLRCGERLCP Trigger: GGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCCCGGAAGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639840.1 |
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| CDS TCA 90 bp | GGAAGTGAGGAGCGCCTCTTCCGGGCCGCCATCCCATCTAGGAAGTaGGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAGATGTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: GSEERLFRAAIPSRK*GASLPGRPSSEMWG Trigger: TCCCCACATCTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCCCGGAAGAGGCGCTCCTCACTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639840.1 |
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| CDS GCA 90 bp | AGCTTGGAAGCACCCTCCAGTGTGAAGGCCATGGCTGGCCGGTGCTaGCTTCTCCCCTCAGAGGAAAAGCAGGCAGAGCCACATCCATGG | + |
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Preference number: 5 (lower is better) Translates to: SLEAPSSVKAMAGRC*LLPSEEKQAEPHPW Trigger: CCATGGATGTGGCTCTGCCTGCTTTTCCTCTGAGGGGAGAAGGCAGCACCGGCCAGCCATGGCCTTCACACTGGAGGGTGCTTCCAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639639.1 |
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| CDS GCA 90 bp | AAGAGCTTGGAAGCACCCTCCAGTGTGAAGGCCATGGCTGGCCGGTaGTGCCTTCTCCCCTCAGAGGAAAAGCAGGCAGAGCCACATCCA | + |
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Preference number: 5 (lower is better) Translates to: KSLEAPSSVKAMAGR*CLLPSEEKQAEPHP Trigger: TGGATGTGGCTCTGCCTGCTTTTCCTCTGAGGGGAGAAGGCAGCACCGGCCAGCCATGGCCTTCACACTGGAGGGTGCTTCCAAGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639639.1 |
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| CDS TCA 90 bp | GCCAGGGGTTCACCAGCACGTGACACATGGTCACTGTCCAGACGCTaGGAGAAGCTCATCAAGGAGCTCTGCTGGAGTCAAAAGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: ARGSPARDTWSLSRR*EKLIKELCWSQKVL Trigger: CAAGACCTTTTGACTCCAGCAGAGCTCCTTGATGAGCTTCTCTCAGCGTCTGGACAGTGACCATGTGTCACGTGCTGGTGAACCCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639318.1 |
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| CDS CCA 90 bp | CCACTGGTTTCCTTCCCGCTTAAGATGCAGCTGCCAGTCCGCTGGTaGGAAGCAGATACGGTTGCTAAGCAACTTCTTCCTGGAGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: PLVSFPLKMQLPVRW*EADTVAKQLLPGGW Trigger: CCAACCTCCAGGAAGAAGTTGCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCATCTTAAGCGGGAAGGAAACCAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS CCA 90 bp | ATTCCACTGGTTTCCTTCCCGCTTAAGATGCAGCTGCCAGTCCGCTaGTGGGAAGCAGATACGGTTGCTAAGCAACTTCTTCCATGGCCT | + |
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Preference number: 5 (lower is better) Translates to: IPLVSFPLKMQLPVR*WEADTVAKQLLPWP Trigger: AGGCCATGGAAGAAGTTGCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCATCTTAAGCGGGAAGGAAACCAGTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460457.2 |
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| CDS CCA 90 bp | ATTCCACTGGTTTCCTTCCCGCTTAAGATGCAGCTGCCAGTCCGCTaGTGGGAAGCAGATACGGTTGCTAAGCAACTTCTTCCTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: IPLVSFPLKMQLPVR*WEADTVAKQLLPGG Trigger: ACCTCCAGGAAGAAGTTGCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCATCTTAAGCGGGAAGGAAACCAGTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS TCA 90 bp | CTCATTCAATATTTATTGGGCCCTGGCCAGGGGTTCACCAGCACGTaGCACATGGTCACTGTCCAGACGCTGAGAGAAGCTCATCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: LIQYLLGPGQGFTST*HMVTVQTLREAHQG Trigger: TCCTTGATGAGCTTCTCTCAGCGTCTGGACAGTGACCATGTGTCACGTGCTGGTGAACCCCTGGCCAGGGCCCAATAAATATTGAATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639318.1 |
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| CDS GCA 90 bp | ATCACATTGCTATTCCACTGGTTTCCTTCCCGCTTAAGATGCAGCTaGCAGTCCGCTGGTGGGAAGCAGATACGGTTGCTAAGCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: ITLLFHWFPSRLRCS*QSAGGKQIRLLSNF Trigger: GAAGTTGCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCATCTTAAGCGGGAAGGAAACCAGTGGAATAGCAATGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460457.2 ENST00000640592.1 |
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| CDS GCA 90 bp | ATCAAAATCACATTGCTATTCCACTGGTTTCCTTCCCGCTTAAGATaGAGCTGCCAGTCCGCTGGTGGGAAGCAGATACGGTTGCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: IKITLLFHWFPSRLR*SCQSAGGKQIRLLS Trigger: GCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCATCTTAAGCGGGAAGGAAACCAGTGGAATAGCAATGTGATTTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460457.2 ENST00000640592.1 |
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| CDS TCA 90 bp | CATCCCTGTTTGTTTTCCTGGCCAGCATATCAGAGCAGGCATGTTTaGGAACATGGGGGTGGCCAGGGAAGTCATGTCCTATATTACTAT | + |
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Preference number: 5 (lower is better) Translates to: HPCLFSWPAYQSRHV*EHGGGQGSHVLYYY Trigger: ATAGTAATATAGGACATGACTTCCCTGGCCACCCCCATGTTCTCAAACATGCCTGCTCTGATATGCTGGCCAGGAAAACAAACAGGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS TCA 90 bp | ACCACTCACATCACAAGTAACTTCATCTCCCTGTGCCTATGTGCCTaGGAGATGTGTAAAATGGGGATAGTAACAGTACCCATCACACAG | + |
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Preference number: 5 (lower is better) Translates to: TTHITSNFISLCLCA*EMCKMGIVTVPITQ Trigger: CTGTGTGATGGGTACTGTTACTATCCCCATTTTACACATCTCTCAGGCACATAGGCACAGGGAGATGAAGTTACTTGTGATGTGAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000638233.1 |
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| CDS GCA 90 bp | ATGCCAGGAATTCAGCATGATGGGGCTGGCACAGTCATGGATATTTaGAAAGCTGACATTTGTGTTACAATTCCTGACACGAAGATGTGT | + |
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Preference number: 5 (lower is better) Translates to: MPGIQHDGAGTVMDI*KADICVTIPDTKMC Trigger: ACACATCTTCGTGTCAGGAATTGTAACACAAATGTCAGCTTTGCAAATATCCATGACTGTGCCAGCCCCATCATGCTGAATTCCTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS CCA 72 bp | GAGATGTGGGGAGCGCCTCTGCCCCGCCGCCCGGTCTaGGATGTGAGGAGCACCTCTGCCTGGCCGCGACCC | + |
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Preference number: 6 (lower is better) Translates to: EMWGAPLPRRPV*DVRSTSAWPRP Trigger: GGGTCGCGGCCAGGCAGAGGTGCTCCTCACATCCCAGACCGGGCGGCGGGGCAGAGGCGCTCCCCACATCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639840.1 |
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| CDS CCA 72 bp | CGCCGCCCGGTCTGGGATGTGAGGAGCACCTCTGCCTaGCCGCGACCCCGTCTGGGAGGTGAGGAACGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RRPVWDVRSTSA*PRPRLGGEERL Trigger: GAGACGTTCCTCACCTCCCAGACGGGGTCGCGGCCAGGCAGAGGTGCTCCTCACATCCCAGACCGGGCGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639840.1 |
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| CDS TCA 72 bp | GAGCGCCTCTTCCGGGCCGCCATCCCATCTAGGAAGTaGGGAGCGTCTCTGCCCGGCCGCCCATCGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ERLFRAAIPSRK*GASLPGRPSSE Trigger: CTCAGACGATGGGCGGCCGGGCAGAGACGCTCCTCACTTCCTAGATGGGATGGCGGCCCGGAAGAGGCGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639840.1 |
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| CDS GCA 72 bp | GCACCCTCCAGTGTGAAGGCCATGGCTGGCCGGTGCTaGCTTCTCCCCTCAGAGGAAAAGCAGGCAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: APSSVKAMAGRC*LLPSEEKQAEP Trigger: TGGCTCTGCCTGCTTTTCCTCTGAGGGGAGAAGGCAGCACCGGCCAGCCATGGCCTTCACACTGGAGGGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639639.1 |
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| CDS GCA 72 bp | GAAGCACCCTCCAGTGTGAAGGCCATGGCTGGCCGGTaGTGCCTTCTCCCCTCAGAGGAAAAGCAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: EAPSSVKAMAGR*CLLPSEEKQAE Trigger: CTCTGCCTGCTTTTCCTCTGAGGGGAGAAGGCAGCACCGGCCAGCCATGGCCTTCACACTGGAGGGTGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639639.1 |
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| CDS CCA 72 bp | GAGCTTGGAAGCACCCTCCAGTGTGAAGGCCATGGCTaGCCGGTGCTGCCTTCTCCCCTCAGAGGAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: ELGSTLQCEGHG*PVLPSPLRGKA Trigger: TGCTTTTCCTCTGAGGGGAGAAGGCAGCACCGGCCAGCCATGGCCTTCACACTGGAGGGTGCTTCCAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639639.1 |
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| CDS CAA 90 bp | TCCCACCTACCACAAAGGCAAGGGCCAAAAGCAAAAGTCAAGAGCTaGGAAGCACCCTCCAGTGTGAAGGCCATGGCTGGCCGGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SHLPQRQGPKAKVKS*EAPSSVKAMAGRCC Trigger: GCAGCACCGGCCAGCCATGGCCTTCACACTGGAGGGTGCTTCCAAGCTCTTGACTTTTGCTTTTGGCCCTTGCCTTTGTGGTAGGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639639.1 |
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| CDS TCA 72 bp | GGGGCGGGTGCCTGTAGTTCCAGCTACTCGGGAGACTaGGTGAGAGAATTGCTTGAACCTGGAAGGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GAGACSSSYSGD*VRELLEPGRWW Trigger: CCACCACCTTCCAGGTTCAAGCAATTCTCTCACTCAGTCTCCCGAGTAGCTGGAACTACAGGCACCCGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639461.1 |
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| CDS GCA 72 bp | TTTCCTCCTCTTGTTGTGTCTGTAGCACAGCTGCAGTaGCTCTGCGGCTGCAGTCCCCTCATCCAGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: FPPLVVSVAQLQ*LCGCSPLIQQG Trigger: TCCCTGCTGGATGAGGGGACTGCAGCCGCAGAGGCACTGCAGCTGTGCTACAGACACAACAAGAGGAGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000321612.8 ENST00000639364.1 ENST00000639840.1 ENST00000639954.1 ENST00000640592.1 |
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| CDS CAA 72 bp | TGCAGCTGCCAGTCCGCTGGTGGGAAGCAGATACGGTaGCTAAGCAACTTCTTCCTGGAGGTTGGGAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: CSCQSAGGKQIR*LSNFFLEVGRL Trigger: CAACCTCCCAACCTCCAGGAAGAAGTTGCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS TCA 72 bp | TATTTATTGGGCCCTGGCCAGGGGTTCACCAGCACGTaGCACATGGTCACTGTCCAGACGCTGAGAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: YLLGPGQGFTST*HMVTVQTLREA Trigger: AGCTTCTCTCAGCGTCTGGACAGTGACCATGTGTCACGTGCTGGTGAACCCCTGGCCAGGGCCCAATAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639318.1 |
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| CDS TCA 72 bp | CGGGTGCCTGTAGTTCCAGCTACTCGGGAGACTGAGTaGGAGAATTGCTTGAACCTGGAAGGTGGTGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RVPVVPATRETE*ENCLNLEGGGC Trigger: GCAACCACCACCTTCCAGGTTCAAGCAATTCTCTCACTCAGTCTCCCGAGTAGCTGGAACTACAGGCACCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639461.1 |
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| CDS CAA 72 bp | TGCAGCTGCCAGTCCGCTGGTGGGAAGCAGATACGGTaGCTAAGCAACTTCTTCCATGGCCTTGAGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: CSCQSAGGKQIR*LSNFFHGLEVN Trigger: GTTCACCTCAAGGCCATGGAAGAAGTTGCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460457.2 |
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| CDS TCA 72 bp | TCACCAGCACGTGACACATGGTCACTGTCCAGACGCTaGGAGAAGCTCATCAAGGAGCTCTGCTGGAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SPARDTWSLSRR*EKLIKELCWSQ Trigger: TTGACTCCAGCAGAGCTCCTTGATGAGCTTCTCTCAGCGTCTGGACAGTGACCATGTGTCACGTGCTGGTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639318.1 |
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| CDS GCA 72 bp | ACATTGCTATTCCACTGGTTTCCTTCCCGCTTAAGATaGAGCTGCCAGTCCGCTGGTGGGAAGCAGATACGG | + |
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Preference number: 6 (lower is better) Translates to: TLLFHWFPSRLR*SCQSAGGKQIR Trigger: CCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCATCTTAAGCGGGAAGGAAACCAGTGGAATAGCAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460457.2 ENST00000640592.1 |
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| CDS CCA 72 bp | TCCTTCCCGCTTAAGATGCAGCTGCCAGTCCGCTGGTaGGAAGCAGATACGGTTGCTAAGCAACTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SFPLKMQLPVRW*EADTVAKQLLP Trigger: TGGAAGAAGTTGCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCATCTTAAGCGGGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460457.2 |
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| CDS CCA 72 bp | TCCTTCCCGCTTAAGATGCAGCTGCCAGTCCGCTGGTaGGAAGCAGATACGGTTGCTAAGCAACTTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SFPLKMQLPVRW*EADTVAKQLLP Trigger: AGGAAGAAGTTGCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCATCTTAAGCGGGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS CCA 72 bp | GTTTCCTTCCCGCTTAAGATGCAGCTGCCAGTCCGCTaGTGGGAAGCAGATACGGTTGCTAAGCAACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: VSFPLKMQLPVR*WEADTVAKQLL Trigger: AAGAAGTTGCTTAGCAACCGTATCTGCTTCCCACCAGCGGACTGGCAGCTGCATCTTAAGCGGGAAGGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460457.2 ENST00000640592.1 |
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| CDS TCA 72 bp | TTGTTTTCCTGGCCAGCATATCAGAGCAGGCATGTTTaGGAACATGGGGGTGGCCAGGGAAGTCATGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LFSWPAYQSRHV*EHGGGQGSHVL Trigger: TAGGACATGACTTCCCTGGCCACCCCCATGTTCTCAAACATGCCTGCTCTGATATGCTGGCCAGGAAAACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS CAA 72 bp | TTTGTTTTCCTGGCCAGCATATCAGAGCAGGCATGTTaGAGAACATGGGGGTGGCCAGGGAAGTCATGTCCT | + |
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Preference number: 6 (lower is better) Translates to: FVFLASISEQAC*RTWGWPGKSCP Trigger: AGGACATGACTTCCCTGGCCACCCCCATGTTCTCAAACATGCCTGCTCTGATATGCTGGCCAGGAAAACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS CCA 72 bp | CTGGCCAGCATATCAGAGCAGGCATGTTTGAGAACATaGGGGTGGCCAGGGAAGTCATGTCCTATATTACTA | + |
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Preference number: 6 (lower is better) Translates to: LASISEQACLRT*GWPGKSCPILL Trigger: TAGTAATATAGGACATGACTTCCCTGGCCACCCCCATGTTCTCAAACATGCCTGCTCTGATATGCTGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS CAA 72 bp | GCCCCTTCTCCCTCACACTCAGGGGATAAGCTACTTTaGCTACCACCTCCAATAGTTATGATGAGGAACGCA | + |
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Preference number: 6 (lower is better) Translates to: APSPSHSGDKLL*LPPPIVMMRNA Trigger: TGCGTTCCTCATCATAACTATTGGAGGTGGTAGCAAAAGTAGCTTATCCCCTGAGTGTGAGGGAGAAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640703.1 |
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| CDS CAA 90 bp | ACATCCCTGTTTGTTTTCCTGGCCAGCATATCAGAGCAGGCATGTTaGAGAACATGGGGGTGGCCAGGGAAGTCATGTCCTATATTACTA | + |
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Preference number: 6 (lower is better) Translates to: TSLFVFLASISEQAC*RTWGWPGKSCPILL Trigger: TAGTAATATAGGACATGACTTCCCTGGCCACCCCCATGTTCTCAAACATGCCTGCTCTGATATGCTGGCCAGGAAAACAAACAGGGATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS CAA 90 bp | GAGTTCACAGTCTCCATGCCTAATAACACCACCATCAAAATCACATaGCTATTCCACTGGTTTCCTTCCCGCTTAAGATGCAGCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: EFTVSMPNNTTIKIT*LFHWFPSRLRCSCQ Trigger: CTGGCAGCTGCATCTTAAGCGGGAAGGAAACCAGTGGAATAGCAATGTGATTTTGATGGTGGTGTTATTAGGCATGGAGACTGTGAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460457.2 ENST00000640592.1 |
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| CDS CAA 72 bp | TTCCTGACACGAAGATGTGTAAGTGTGACTGCCATTTaGATTATTAAGTGGGGAAGGCGAGAAGGAGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: FLTRRCVSVTAI*IIKWGRREGEG Trigger: TCCCTCTCCTTCTCGCCTTCCCCACTTAATAATCAAAATGGCAGTCACACTTACACATCTTCGTGTCAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640592.1 |
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| CDS CAA 72 bp | GTCTCCATGCCTAATAACACCACCATCAAAATCACATaGCTATTCCACTGGTTTCCTTCCCGCTTAAGATGC | + |
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Preference number: 6 (lower is better) Translates to: VSMPNNTTIKIT*LFHWFPSRLRC Trigger: GCATCTTAAGCGGGAAGGAAACCAGTGGAATAGCAATGTGATTTTGATGGTGGTGTTATTAGGCATGGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000460457.2 ENST00000640592.1 |
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| CDS GCA 72 bp | ACCACTCCTACCCAAAGATGGAGCTTTCTATATCCTTaGTCAGGACCACGCATTGAAAATAGCCTTTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: TTPTQRWSFLYP*SGPRIENSLLL Trigger: TAACAAAAGGCTATTTTCAATGCGTGGTCCTGAGCAAGGATATAGAAAGCTCCATCTTTGGGTAGGAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639318.1 |
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| CDS CCA 72 bp | AGCTTTTTATGTGTATCAGCGAGGACCAAGAAGCCATaGGCACCGGGTAAGTTTATTATTGGCAATAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SFLCVSARTKKP*APGKFIIGNKG Trigger: ACCTTTATTGCCAATAATAAACTTACCCGGTGCCCATGGCTTCTTGGTCCTCGCTGATACACATAAAAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639461.1 |
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| CDS TCA 72 bp | GGCATTACTGAACATATGACCGGAGGTGTCTGGGGATaGGATTATTTCTATTCTGCGGACATAAAATCTACT | + |
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Preference number: 6 (lower is better) Translates to: GITEHMTGGVWG*DYFYSADIKST Trigger: AGTAGATTTTATGTCCGCAGAATAGAAATAATCTCATCCCCAGACACCTCCGGTCATATGTTCAGTAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639461.1 |
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| CDS GCA 72 bp | AAGATAGGAGATCCCCCAAACTCTCATATAGAAACCTaGTCCTCAGCCATTGACATGTCACAGAATAATAAA | + |
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Preference number: 6 (lower is better) Translates to: KIGDPPNSHIET*SSAIDMSQNNK Trigger: TTTATTATTCTGTGACATGTCAATGGCTGAGGAGCAGGTTTCTATATGAGAGTTTGGGGGATCTCCTATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000640703.1 |
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| CDS CAA 72 bp | GGAACTACGACGTGTGTGTCAGCCAGCTGTAACAATTaGGTTTACGGTCAATCTTGTTTCCTATTATATTTC | + |
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Preference number: 6 (lower is better) Translates to: GTTTCVSASCNN*VYGQSCFLLYF Trigger: GAAATATAATAGGAAACAAGATTGACCGTAAACCAAATTGTTACAGCTGGCTGACACACACGTCGTAGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639318.1 |
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| CDS CAA 90 bp | AGAACAAAAGGAACTACGACGTGTGTGTCAGCCAGCTGTAACAATTaGGTTTACGGTCAATCTTGTTTCCTATTATATTTCTCACTAACC | + |
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Preference number: 6 (lower is better) Translates to: RTKGTTTCVSASCNN*VYGQSCFLLYFSLT Trigger: GGTTAGTGAGAAATATAATAGGAAACAAGATTGACCGTAAACCAAATTGTTACAGCTGGCTGACACACACGTCGTAGTTCCTTTTGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639318.1 |
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| CDS CAA 72 bp | GGACCAAGAAGCCATGGGCACCGGGTAAGTTTATTATaGGCAATAAAGGTTTCATTTAGTCTTATTACAAAT | + |
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Preference number: 6 (lower is better) Translates to: GPRSHGHRVSLL*AIKVSFSLITN Trigger: ATTTGTAATAAGACTAAATGAAACCTTTATTGCCAATAATAAACTTACCCGGTGCCCATGGCTTCTTGGTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639461.1 |
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| CDS CAA 72 bp | ATGACATATCCCTTATTTGAAATTACAGATCTTTATTaGAGCCTCATGTGGGCACCCAAAAGTTTTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: MTYPLFEITDLY*SLMWAPKSFGF Trigger: AAATCCAAAACTTTTGGGTGCCCACATGAGGCTCAAATAAAGATCTGTAATTTCAAATAAGGGATATGTCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639461.1 |
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