RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLCE (Homo sapiens)

Ensembl gene IDs: ENSG00000138604

Ensembl transcript IDs: ENST00000261858.7, ENST00000559420.2, ENST00000559500.1, ENST00000559798.2

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCACAAGGAGGATGAAAATAGCAGCTTTCAGTGAGAGTCTGCACTaGGAAAGGAGAAGGAGCCACGTCTGGAGAGTTGTGCTTGTGTCA +
Preference number: 1 (lower is better)
Translates to: TTRRMKIAAFSESLH*ERRRSHVWRVVLVS
Trigger: TGACACAAGCACAACTCTCCAGACGTGGCTCCTTCTCCTTTCTCAGTGCAGACTCTCACTGAAAGCTGCTATTTTCATCCTCCTTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR GCA 90 bp GAAGGAGCCACGTCTGGAGAGTTGTGCTTGTGTCATTTTTGCACTTaGTTCTGTGCGCTGGATGGTTCGTGGATGAAGCCTTTATGTACA +
Preference number: 1 (lower is better)
Translates to: EGATSGELCLCHFCT*FCALDGSWMKPLCT
Trigger: TGTACATAAAGGCTTCATCCACGAACCATCCAGCGCACAGAAGCAAGTGCAAAAATGACACAAGCACAACTCTCCAGACGTGGCTCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR TCA 90 bp TGCTCATTACAAATGCAGACTATCATACTTCACAGGCAGATTTACTaGCTCTGGGATCTGCATTTCAATAAGCTCCCAAGTGATGCTGAG +
Preference number: 1 (lower is better)
Translates to: CSLQMQTIILHRQIY*LWDLHFNKLPSDAE
Trigger: CTCAGCATCACTTGGGAGCTTATTGAAATGCAGATCCCAGAGTCAGTAAATCTGCCTGTGAAGTATGATAGTCTGCATTTGTAATGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR GCA 90 bp TCAACTCATCCTCTTAGAAAATTCTGGGATCACAAGAAATCAACTTaGTGTTGCAATGTGGAAGGCAGTGTAAAACCAACAGCAAGGAAA +
Preference number: 1 (lower is better)
Translates to: STHPLRKFWDHKKST*CCNVEGSVKPTARK
Trigger: TTTCCTTGCTGTTGGTTTTACACTGCCTTCCACATTGCAACAGCAAGTTGATTTCTTGTGATCCCAGAATTTTCTAAGAGGATGAGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR CCA 90 bp ACTGACAATGCTGCTATAGATTCAACTCATCCTCTTAGAAAATTCTaGGATCACAAGAAATCAACTTGCTGTTGCAATGTGGAAGGCAGT +
Preference number: 1 (lower is better)
Translates to: TDNAAIDSTHPLRKF*DHKKSTCCCNVEGS
Trigger: ACTGCCTTCCACATTGCAACAGCAAGTTGATTTCTTGTGATCCCAGAATTTTCTAAGAGGATGAGTTGAATCTATAGCAGCATTGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR TCA 90 bp TGTCACAGAAGCAGTACCATACTGTTATCATCGAGTCTCATAATCTaGAGACCAGTATGCAAACAAAGCAGACGTATGAACCATTCTAAA +
Preference number: 1 (lower is better)
Translates to: CHRSSTILLSSSLII*RPVCKQSRRMNHSK
Trigger: TTTAGAATGGTTCATACGTCTGCTTTGTTTGCATACTGGTCTTCAGATTATGAGACTCGATGATAACAGTATGGTACTGCTTCTGTGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR GCA 90 bp AGTTTTGCTGTATATAAAACTAACATGTGCACATTGTGCTTAAACTaGAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGC +
Preference number: 1 (lower is better)
Translates to: SFAVYKTNMCTLCLN*KVCTALQRTTLQKG
Trigger: GCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTGCAGTTTAAGCACAATGTGCACATGTTAGTTTTATATACAGCAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTCCCTATAGCAGACACTaGCCATTGTATGGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAPYSRH*PLYGGS
Trigger: AGAGCCCCCATACAATGGGCAGTGTCTGCTATAGGG...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGTGTACAGCAGAGGCTaGAGTGCAGTTTTGGTTGTG +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAVYSRG*SAVLVV
Trigger: CACAACCAAAACTGCACTTCAGCCTCTGCTGTACAC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTATGGGCAAGGCAAAGTaGAGCATCTTTGTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAMGKAK*SIFVQP
Trigger: GGGCTGAACAAAGATGCTTCACTTTGCCTTGCCCAT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTCAGACTCGGTCCCCTaGAAGTGTAGGGTATCATAT +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPASDSVP*KCRVSY
Trigger: ATATGATACCCTACACTTTCAGGGGACCGAGTCTGA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR CAA 90 bp GAAAGGAGAAGGAGCCACGTCTGGAGAGTTGTGCTTGTGTCATTTTaGCACTTGCTTCTGTGCGCTGGATGGTTCGTGGATGAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: ERRRSHVWRVVLVSF*HLLLCAGWFVDEAF
Trigger: AAAGGCTTCATCCACGAACCATCCAGCGCACAGAAGCAAGTGCAAAAATGACACAAGCACAACTCTCCAGACGTGGCTCCTTCTCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGTGTTCCTCCCTGTATaGCCCCAGCTCACCTGCATC +
Preference number: 2 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNVFLPV*PQLTCI
Trigger: GATGCAGGTGAGCTGGGGGCATACAGGGAGGAACAC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR CAA 90 bp AGAAGGAGCCACGTCTGGAGAGTTGTGCTTGTGTCATTTTTGCACTaGCTTCTGTGCGCTGGATGGTTCGTGGATGAAGCCTTTATGTAC +
Preference number: 2 (lower is better)
Translates to: RRSHVWRVVLVSFLH*LLCAGWFVDEAFMY
Trigger: GTACATAAAGGCTTCATCCACGAACCATCCAGCGCACAGAAGCAAGTGCAAAAATGACACAAGCACAACTCTCCAGACGTGGCTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTCTTTCTCACATAGAGTaGCTAGACTATCTGCGAAAC +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPALSHIE*LDYLRN
Trigger: GTTTCGCAGATAGTCTAGTCACTCTATGTGAGAAAG...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTCACAAGAAATCAACTTaGTGTTGCAATGTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAHKKST*CCNVEG
Trigger: GCCTTCCACATTGCAACAGCAAGTTGATTTCTTGTG...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAAGAAACTGTCACAATaGGGGTTGGGAAGGGATATA +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAKKLSQ*GLGRDI
Trigger: TATATCCCTTCCCAACCCCCATTGTGACAGTTTCTT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTCTTTCCTTCTTCAGTaGAAAAGGACAGCCACATTG +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPASFLLQ*KRTATL
Trigger: CAATGTGGCTGTCCTTTTCCACTGAAGAAGGAAAGA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGTTTTATTTAATGCCTaGAGCCCTATAGCAGACACT +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAVLFNA*SPIADT
Trigger: AGTGTCTGCTATAGGGCTTCAGGCATTAAATAAAAC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGGAGAAAGTTTATTTTaGACATCGGCACTGGGAATA +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAGESLF*TSALGI
Trigger: TATTCCCAGTGCCGATGTTCAAAATAAACTTTCTCC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTCGAGTCTCATAATCTaGAGACCAGTATGCAAACAA +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPASSLII*RPVCKQ
Trigger: TTGTTTGCATACTGGTCTTCAGATTATGAGACTCGA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAGGCATTTTAAAGTTTaGGAACCACTGGTCTGTACT +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPARHFKV*EPLVCT
Trigger: AGTACAGACCAGTGGTTCTCAAACTTTAAAATGCCT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTGCATCAGAATCACTTaGATGCTCATTACAAATGCA +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPACIRIT*MLITNA
Trigger: TGCATTTGTAATGAGCATTCAAGTGATTCTGATGCA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTGTGGTCACATCAATTaGGAGTTCAAGCTTACTTTT +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPACGHIN*EFKLTF
Trigger: AAAAGTAAGCTTGAACTCCCAATTGATGTGACCACA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAAAAGGTTCCCAGACTaGAGAAAGTTTATTTTGAAC +
Preference number: 2 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAKRFPD*RKFILN
Trigger: GTTCAAAATAAACTTTCTCCAGTCTGGGAACCTTTT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGCGCTGGATGGTTCGTaGATGAAGCCTTTATGTACA +
Preference number: 2 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNALDGS*MKPLCT
Trigger: TGTACATAAAGGCTTCATCCACGAACCATCCAGCGC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACACCACTGGTCTGTACTaGCAATGCTGCTATAGATTC +
Preference number: 2 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNTTGLY*QCCYRF
Trigger: GAATCTATAGCAGCATTGTCAGTACAGACCAGTGGT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACCTTTCAGTGAGAGTCTaGACTGAGAAAGGAGAAGGA +
Preference number: 2 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNLSVRV*TEKGEG
Trigger: TCCTTCTCCTTTCTCAGTGCAGACTCTCACTGAAAG...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGCGAAACTGTATAGGGTaGTGGGCAAGGCAAAGTGAA +
Preference number: 2 (lower is better)
Translates to: VQICIFFASAPFDANIYMRNCIG*WARQSE
Trigger: TTCACTTTGCCTTGCCCATCACCCTATACAGTTTCG...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACATTGTATGGGGGCTCTaGAATCTATTTATGTGCGGT +
Preference number: 2 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNIVWGL*NLFMCG
Trigger: ACCGCACATAAATAGATTTCAGAGCCCCCATACAAT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACAAGTTTGAGAACCACTaGTCTGTACTGACAATGCTG +
Preference number: 2 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNKFENH*SVLTML
Trigger: CAGCATTGTCAGTACAGACCAGTGGTTCTCAAACTT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGTGTACAGCAGAGGCTaGAGTGCAGTTTTGGTTGTG +
Preference number: 2 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLVYSRG*SAVLVV
Trigger: CACAACCAAAACTGCACTTCAGCCTCTGCTGTACAC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTCGAGTCTCATAATCTaGAGACCAGTATGCAAACAA +
Preference number: 2 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNSSLII*RPVCKQ
Trigger: TTGTTTGCATACTGGTCTTCAGATTATGAGACTCGA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACAGGCATTTTAAAGTTTaGGAACCACTGGTCTGTACT +
Preference number: 2 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNRHFKV*EPLVCT
Trigger: AGTACAGACCAGTGGTTCTCAAACTTTAAAATGCCT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR CAA 90 bp CCTTCTTCAGTGGAAAAGGACAGCCACATTGTTAAGGCACGATATTaGTCACAGAAGCAGTACCATACTGTTATCATCGAGTCTCATAAT +
Preference number: 2 (lower is better)
Translates to: PSSVEKDSHIVKARY*SQKQYHTVIIESHN
Trigger: ATTATGAGACTCGATGATAACAGTATGGTACTGCTTCTGTGACAAATATCGTGCCTTAACAATGTGGCTGTCCTTTTCCACTGAAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCATGGGCAAGGCAAAGTaGAGCATCTTTGTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCMGKAK*SIFVQP
Trigger: GGGCTGAACAAAGATGCTTCACTTTGCCTTGCCCAT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGTTTAAAATGTGCCTATaGTCTCCTGAGACAGAGCCT +
Preference number: 2 (lower is better)
Translates to: VQICIFFASAPFDANIYMFKMCL*SPETEP
Trigger: AGGCTCTGTCTCAGGAGAGCATAGGCACATTTTAAA...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGACCCAACCCATGGAATaGAATTATTTTAGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: VQICIFFASAPFDANIYMTQPME*NYFRRL
Trigger: CAGCCTTCTAAAATAATTGCATTCCATGGGTTGGGT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTCAGAATCACTTGAATaGTCATTACAAATGCAGACT +
Preference number: 2 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNSESLE*SLQMQT
Trigger: AGTCTGCATTTGTAATGAGCATTCAAGTGATTCTGA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGAAGTTGAACACAGTCTaGTATCCAGGCTACAAGTAC +
Preference number: 2 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLKLNTV*YPGYKY
Trigger: GTACTTGTAGCCTGGATAGCAGACTGTGTTCAACTT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR GCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCAAGTTGAACACAGTCTaGTATCCAGGCTACAAGTAC +
Preference number: 2 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCKLNTV*YPGYKY
Trigger: GTACTTGTAGCCTGGATAGCAGACTGTGTTCAACTT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCAAGAAACTGTCACAATaGGGGTTGGGAAGGGATATA +
Preference number: 2 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCKKLSQ*GLGRDI
Trigger: TATATCCCTTCCCAACCCCCATTGTGACAGTTTCTT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR GCA 72 bp ACGTCTGGAGAGTTGTGCTTGTGTCATTTTTGCACTTaGTTCTGTGCGCTGGATGGTTCGTGGATGAAGCCT +
Preference number: 3 (lower is better)
Translates to: TSGELCLCHFCT*FCALDGSWMKP
Trigger: AGGCTTCATCCACGAACCATCCAGCGCACAGAAGCAAGTGCAAAAATGACACAAGCACAACTCTCCAGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CAA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGGAGACCAGATATTCTaGCTGAGACATCTAACATAT +
Preference number: 3 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAGDQIF*LRHLTY
Trigger: ATATGTTAGATGTCTCAGCAAGAATATCTGGTCTCC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACAGATCTGTATCTTCTTaGCTTCTGCCCCCTTTGATG +
Preference number: 3 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNRSVSS*LLPPLM
Trigger: CATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGTGTGGTCACATCAATaGGGAGTTCAAGCTTACTTT +
Preference number: 3 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNVWSHQ*GVQAYF
Trigger: AAAGTAAGCTTGAACTCCCAATTGATGTGACCACAC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR CCA 72 bp CATTTTTGCACTTGCTTCTGTGCGCTGGATGGTTCGTaGATGAAGCCTTTATGTACAATAACTCCTAAAAGG +
Preference number: 3 (lower is better)
Translates to: HFCTCFCALDGS*MKPLCTITPKR
Trigger: CCTTTTAGGAGTTATTGTACATAAAGGCTTCATCCACGAACCATCCAGCGCACAGAAGCAAGTGCAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTCACAGATAAATGTATaGTGTTTGTCAGACTCGGTC +
Preference number: 3 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNSQINV*CLSDSV
Trigger: GACCGAGTCTGACAAACACAATACATTTATCTGTGA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTTGCTTCTGCCCCCTTaGATGCTAACATATATATGT +
Preference number: 3 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNLLLPP*MLTYIC
Trigger: ACATATATATGTTAGCATCAAAGGGGGCAGAAGCAA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR TCA 72 bp CAAATGCAGACTATCATACTTCACAGGCAGATTTACTaGCTCTGGGATCTGCATTTCAATAAGCTCCCAAGT +
Preference number: 3 (lower is better)
Translates to: QMQTIILHRQIY*LWDLHFNKLPS
Trigger: ACTTGGGAGCTTATTGAAATGCAGATCCCAGAGTCAGTAAATCTGCCTGTGAAGTATGATAGTCTGCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGTAAGTGCTAGACAGTaGGCCAGTAGCAACTACTTA +
Preference number: 3 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLVSARQ*ASSNYL
Trigger: TAAGTAGTTGCTACTGGCCAACTGTCTAGCACTTAC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCTGTCACAATGGGGGTaGGGAAGGGATATACTGATT +
Preference number: 3 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCLSQWG*GRDILI
Trigger: AATCAGTATATCCCTTCCCAACCCCCATTGTGACAG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CAA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGTCACAGATAAATGTATaGTGTTTGTCAGACTCGGTC +
Preference number: 3 (lower is better)
Translates to: VQICIFFASAPFDANIYMSQINV*CLSDSV
Trigger: GACCGAGTCTGACAAACACAATACATTTATCTGTGA...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR TCA 72 bp AGCAGTACCATACTGTTATCATCGAGTCTCATAATCTaGAGACCAGTATGCAAACAAAGCAGACGTATGAAC +
Preference number: 3 (lower is better)
Translates to: SSTILLSSSLII*RPVCKQSRRMN
Trigger: GTTCATACGTCTGCTTTGTTTGCATACTGGTCTTCAGATTATGAGACTCGATGATAACAGTATGGTACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGTAAGTGCTAGACAGTaGGCCAGTAGCAACTACTTA +
Preference number: 3 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCVSARQ*ASSNYL
Trigger: TAAGTAGTTGCTACTGGCCAACTGTCTAGCACTTAC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR TCA 72 bp GACCTTCATCCAGAAACTTTTGGCTGGTTTTACAACTaGAGTAGCAATAGATTTAACATCAAAGTGAACTCA +
Preference number: 3 (lower is better)
Translates to: DLHPETFGWFYN*SSNRFNIKVNS
Trigger: TGAGTTCACTTTGATGTTAAATCTATTGCTACTTCAGTTGTAAAACCAGCCAAAAGTTTCTGGATGAAGGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR GCA 72 bp GTATATAAAACTAACATGTGCACATTGTGCTTAAACTaGAAAGTCTGTACAGCTTTACAAAGGACTACCCTT +
Preference number: 3 (lower is better)
Translates to: VYKTNMCTLCLN*KVCTALQRTTL
Trigger: AAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTGCAGTTTAAGCACAATGTGCACATGTTAGTTTTATATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGGGGTGGCTCAGGCCTaGGGTGCCGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNGVAQA*GAAAPA
Trigger: GGCTGGAGCTGCGGCACCGCAGGCCTGAGCCACCCC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261858.7
CDS-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGGTAACTGTGCTCCATaGAGTTCTGGGCCCAATGCC +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAGNCAP*SSGPNA
Trigger: GGCATTGGGCCCAGAACTTCATGGAGCACAGTTACC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTCCCAACAACAGGGGGTaGTTTCTGCTGTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAPNNRG*FLLFLR
Trigger: CCTCAGGAACAGCAGAAAGCACCCCCTGTTGTTGGG...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTCTTGCCCTTGGGCCATaGCAGAATACCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPALALGP*QNTILA
Trigger: AGCCAGGATGGTATTCTGCCATGGCCCAAGGGCAAG...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTTCCCACATTGCTATTaGAGCCCCCAACAACAGGGG +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAFPHCY*SPQQQG
Trigger: CCCCTGTTGTTGGGGGCTTCAATAGCAATGTGGGAA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGAGCGATGCCAAGCATaGAGTGACGGAGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAERCQA*SDGGHR
Trigger: TCTATGACCTCCGTCACTTCATGCTTGGCATCGCTC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGGGCTCAGGCCTGCGGTaGCGCAGCTCCAGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMGSGLR*RSSSLS
Trigger: CGAGAGGCTGGAGCTGCGGCACCGCAGGCCTGAGCC...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261858.7
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTTGCACTTGCTTCTGTaGGCTGGATGGTTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPALHLLL*AGWFVD
Trigger: ATCCACGAACCATCCAGCGCACAGAAGCAAGTGCAA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGACGGAGGTCATAGATaGTTCCTGAGCCAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPADGGHR*FLSQCH
Trigger: ATGACACTGGCTCAGGAACCATCTATGACCTCCGTC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAGAAGGAGCCACGTCTaGAGAGTTGTGCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPARRSHV*RVVLVS
Trigger: TGACACAAGCACAACTCTCCAGACGTGGCTCCTTCT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAATGTAGAAATGGCTTaGCCTTGGGCCATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPANVEMA*PWAMAE
Trigger: TTCTGCCATGGCCCAAGGGCAAGCCATTTCTACATT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGCTCTAGTTGTGCTTTaGCCTGCTGCCTTTAAGGTA +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAALVVL*PAAFKV
Trigger: TACCTTAAAGGCAGCAGGGCAAAGCACAACTAGAGC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGCGCTGGATGGTTCGTaGATGAAGCCTTTATGTACA +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAALDGS*MKPLCT
Trigger: TGTACATAAAGGCTTCATCCACGAACCATCCAGCGC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTCCTCAGACTGTTGTTTaGCCACGTGGTTCATATAGT +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAPQTVV*PRGSYS
Trigger: ACTATATGAACCACGTGGCCAAACAACAGTCTGAGG...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAAGTTGAACACAGTCTaGTATCCAGGCTACAAGTAC +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAKLNTV*YPGYKY
Trigger: GTACTTGTAGCCTGGATAGCAGACTGTGTTCAACTT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGACAGCAGAGAAGGGGTaGCTCAGGCCTGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLTAEKG*LRPAVP
Trigger: CGGCACCGCAGGCCTGAGCCACCCCTTCTCTGCTGT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261858.7
CDS-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTCTGTGCAATCTGGATTaGATAGAAATAGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPALCNLD*IEIALR
Trigger: CCTCAAGGCTATTTCTATCCAATCCAGATTGCACAG...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACCTTGCCCTTGGGCCATaGCAGAATACCATCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNLALGP*QNTILA
Trigger: AGCCAGGATGGTATTCTGCCATGGCCCAAGGGCAAG...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGAGCGATGCCAAGCATaGAGTGACGGAGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNERCQA*SDGGHR
Trigger: TCTATGACCTCCGTCACTTCATGCTTGGCATCGCTC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGAATCCCTTACCTTTTaGAATCAACCTAACCACCTT +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAESLTF*NQPNHL
Trigger: AAGGTGGTTAGGTTGATTGCAAAAGGTAAGGGATTC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTCTCATACAAGGACCTTaGTTCTTTTCCGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPALIQGP*FFSEFF
Trigger: GAAAAACTCGGAAAAGAAGCAAGGTCCTTGTATGAG...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGGTGTTCCTCCCTGTATaGCCCCAGCTCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMVFLPV*PQLTCI
Trigger: GATGCAGGTGAGCTGGGGGCATACAGGGAGGAACAC...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGGGTAACTGTGCTCCATaGAGTTCTGGGCCCAATGCC +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMGNCAP*SSGPNA
Trigger: GGCATTGGGCCCAGAACTTCATGGAGCACAGTTACC...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGGCTGGTTTTACAACTaGAGTAGCAATAGATTTAAC +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAGWFYN*SSNRFN
Trigger: GTTAAATCTATTGCTACTTCAGTTGTAAAACCAGCC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGACCAAAGTGAAGAGTaGGCAGATAATAATCAAAGT +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPADQSEE*ADNNQS
Trigger: ACTTTGATTATTATCTGCGCACTCTTCACTTTGGTC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTACAGCTTTAACTCCATaGTGCTCAGATAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPATALTP*CSDRNL
Trigger: TAAGTTTCTATCTGAGCAGCATGGAGTTAAAGCTGT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTTGCACTTGCTTCTGTaGGCTGGATGGTTCGTGGAT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNLHLLL*AGWFVD
Trigger: ATCCACGAACCATCCAGCGCACAGAAGCAAGTGCAA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAACATGTGCACATTGTaGTTAAACTGCAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPANMCTL*LNCKVC
Trigger: ACAGACTTTGCAGTTTAAGCACAATGTGCACATGTT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGGATTGCTTTGTCACTaGAACACTTATTCCACAAAA +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAGLLCH*NTYSTK
Trigger: TTTTGTGGAATAAGTGTTCCAGTGACAAAGCAATCC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTCAAAGTCTTATAGTTaGCCCGAGCTGCCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNSKSYS*PELPSN
Trigger: GTTGCTTGGCAGCTCGGGTCAACTATAAGACTTTGA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGCCCCACTTATGCACTTaGCTCTGTCTCGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMPHLCT*LCLGLP
Trigger: TGGAAGTCCGAGACAGAGTCAAGTGCATAAGTGGGG...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGCCCTATAGCAGACACTaGCCATTGTATGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMPYSRH*PLYGGS
Trigger: AGAGCCCCCATACAATGGGCAGTGTCTGCTATAGGG...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTCAGAATCACTTGAATaGTCATTACAAATGCAGACT +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPASESLE*SLQMQT
Trigger: AGTCTGCATTTGTAATGAGCATTCAAGTGATTCTGA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTACATTGTGCTTAAACTaGAAAGTCTGTACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPATLCLN*KVCTAL
Trigger: TAAAGCTGTACAGACTTTGCAGTTTAAGCACAATGT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTCTGTGCATAGACTTTaGAATAGCTATGAGAGAATT +
Preference number: 4 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPASVHRL*NSYERI
Trigger: AATTCTCTCATAGCTATTCCAAAGTCTATGCACAGA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGACAGCTTTTGTGTTTaGAAGACCCACTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNDSFCV*KTHSFP
Trigger: AGGAAAGGAGTGGGTCTTTCAAACACAAAAGCTGTC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGTAGCTGCAACTGATTaGTGTGGGTGGTATGATAGT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNVAATD*CGWYDS
Trigger: ACTATCATACCACCCACATCAATCAGTTGCAGCTAC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGGTGTACAGCAGAGGCTaGAGTGCAGTTTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMVYSRG*SAVLVV
Trigger: CACAACCAAAACTGCACTTCAGCCTCTGCTGTACAC...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGCAGCAGAGGCTGAAGTaGAGTTTTGGTTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMQQRLK*SFGCEL
Trigger: GAGCTCACAACCAAAACTGCACTTCAGCCTCTGCTG...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGTGTTCCTCCCTGTATaGCCCCAGCTCACCTGCATC +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCVFLPV*PQLTCI
Trigger: GATGCAGGTGAGCTGGGGGCATACAGGGAGGAACAC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGAGGCAAAAATGCAATaGATAGTCCAGGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNEAKMQ*IVQGSV
Trigger: AACACTGCCCTGGACTATCCATTGCATTTTTGCCTC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCAAACCCATCCACTCTaGAGCCACTACTCGAACGCC +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCQTHPL*SHYSNA
Trigger: GGCGTTCGAGTAGTGGCTTCAGAGTGGATGGGTTTG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGTTCCCACATTGCTATTaGAGCCCCCAACAACAGGGG +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLFPHCY*SPQQQG
Trigger: CCCCTGTTGTTGGGGGCTTCAATAGCAATGTGGGAA...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACCTTTCTCACATAGAGTaGCTAGACTATCTGCGAAAC +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNLSHIE*LDYLRN
Trigger: GTTTCGCAGATAGTCTAGTCACTCTATGTGAGAAAG...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCCCAACAACAGGGGGTaGTTTCTGCTGTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCPNNRG*FLLFLR
Trigger: CCTCAGGAACAGCAGAAAGCACCCCCTGTTGTTGGG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGAATGTAGAAATGGCTTaGCCTTGGGCCATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMNVEMA*PWAMAE
Trigger: TTCTGCCATGGCCCAAGGGCAAGCCATTTCTACATT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGCCCTATAGCAGACACTaGCCATTGTATGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLPYSRH*PLYGGS
Trigger: AGAGCCCCCATACAATGGGCAGTGTCTGCTATAGGG...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACCACAAGAAATCAACTTaGTGTTGCAATGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNHKKST*CCNVEG
Trigger: GCCTTCCACATTGCAACAGCAAGTTGATTTCTTGTG...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGGAACGCCGTGGAAACTaGATTGCTTTGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMERRGN*IALSLE
Trigger: TTCCAGTGACAAAGCAATCCAGTTTCCACGGCGTTC...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGACTACTCGAACGCCGTaGAAACTGGATTGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMTTRTP*KLDCFV
Trigger: GACAAAGCAATCCAGTTTCCACGGCGTTCGAGTAGT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACAGAGCTAGGTGTGGTTaGATATTCTTCATACCAGTC +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNRARCG*IFFIPV
Trigger: GACTGGTATGAAGAATATCCAACCACACCTAGCTCT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACAAGAAACTGTCACAATaGGGGTTGGGAAGGGATATA +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNKKLSQ*GLGRDI
Trigger: TATATCCCTTCCCAACCCCCATTGTGACAGTTTCTT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
3UTR CAA 72 bp GTGGAAAAGGACAGCCACATTGTTAAGGCACGATATTaGTCACAGAAGCAGTACCATACTGTTATCATCGAG +
Preference number: 4 (lower is better)
Translates to: VEKDSHIVKARY*SQKQYHTVIIE
Trigger: CTCGATGATAACAGTATGGTACTGCTTCTGTGACAAATATCGTGCCTTAACAATGTGGCTGTCCTTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACATTTCTCAACCCAAGTaGATGGAAGAAAGACTTCGT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNISQPK*MEERLR
Trigger: ACGAAGTCTTTCTTCCATTCACTTGGGTTGAGAAAT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCCCCACTTATGCACTTaGCTCTGTCTCGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCPHLCT*LCLGLP
Trigger: TGGAAGTCCGAGACAGAGTCAAGTGCATAAGTGGGG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTCATATACCTCTATGTaGGGAGGTTTCTCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNSYTSM*GGFSVR
Trigger: TCTAACTGAGAAACCTCCTCACATAGAGGTATATGA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTGTATAGTGAAGAGCTaGTTCTTTTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNCIVKS*FFSVVS
Trigger: AGAGACCACAGAAAAGAATCAGCTCTTCACTATACA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGGTAGCTGCAACTGATTaGTGTGGGTGGTATGATAGT +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMVAATD*CGWYDS
Trigger: ACTATCATACCACCCACATCAATCAGTTGCAGCTAC...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGATGGGCAAGGCAAAGTaGAGCATCTTTGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLMGKAK*SIFVQP
Trigger: GGGCTGAACAAAGATGCTTCACTTTGCCTTGCCCAT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGGAGAAAGTTTATTTTaGACATCGGCACTGGGAATA +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNGESLF*TSALGI
Trigger: TATTCCCAGTGCCGATGTTCAAAATAAACTTTCTCC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGACCACTGGTCTGTACTaGCAATGCTGCTATAGATTC +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMTTGLY*QCCYRF
Trigger: GAATCTATAGCAGCATTGTCAGTACAGACCAGTGGT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACACCCAACCCATGGAATaGAATTATTTTAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNTQPME*NYFRRL
Trigger: CAGCCTTCTAAAATAATTGCATTCCATGGGTTGGGT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGTGTCATTTTTGCACTTaGTTCTGTGCGCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMCHFCT*FCALDG
Trigger: ACCATCCAGCGCACAGAAGCAAGTGCAAAAATGACA...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACACCTTCACTGGTTTCTaGTGCAATAAACTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNTFTGF*CNKLFD
Trigger: GTCAAACAGTTTATTGCACCAGAAACCAGTGAAGGT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGTGCTCCATGAAGTTCTaGGCCCAATGCCATAGTATA +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMCSMKF*AQCHSI
Trigger: TATACTATGGCATTGGGCCCAGAACTTCATGGAGCA...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGACGGAGGTCATAGATaGTTCCTGAGCCAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLDGGHR*FLSQCH
Trigger: ATGACACTGGCTCAGGAACCATCTATGACCTCCGTC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGCTTCTGTGCGCTGGATaGTTCGTGGATGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLLLCAG*FVDEAF
Trigger: AAAGGCTTCATCCACGAACCATCCAGCGCACAGAAG...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGTCAAAGTCTTATAGTTaGCCCGAGCTGCCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLSKSYS*PELPSN
Trigger: GTTGCTTGGCAGCTCGGGTCAACTATAAGACTTTGA...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACCAATTTCTTCATATTTaGGCCCTAACACCTTACTTC +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNQFLHI*ALTPYF
Trigger: GAAGTAAGGTGTTAGGGCTCAAATATGAAGAAATTG...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGCTGGCTCTAAAGACTTaGACCCTTCCCCTAACTTAC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLLALKT*TLPLTY
Trigger: GTAAGTTAGGGGAAGGGTTCAAGTCTTTAGAGCCAG...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGTGCAGTTTTGGTTGTaGGCTCTAGTTGTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLVQFWL*ALVVLC
Trigger: GCAAAGCACAACTAGAGCTCACAACCAAAACTGCAC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGTGTACAGCAGAGGCTaGAGTGCAGTTTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCVYSRG*SAVLVV
Trigger: CACAACCAAAACTGCACTTCAGCCTCTGCTGTACAC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGTCAGACTCGGTCCCCTaGAAGTGTAGGGTATCATAT +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLSDSVP*KCRVSY
Trigger: ATATGATACCCTACACTTTCAGGGGACCGAGTCTGA...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGATAGTTGACCCGAGCTaGCAAGCAACGCATATTCAG +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLIVDPS*QATHIQ
Trigger: CTGAATATGCGTTGCTTGGCAGCTCGGGTCAACTAT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCAGCAGAGGCTGAAGTaGAGTTTTGGTTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCQQRLK*SFGCEL
Trigger: GAGCTCACAACCAAAACTGCACTTCAGCCTCTGCTG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGAAGTTGAACACAGTCTaGTATCCAGGCTACAAGTAC +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMKLNTV*YPGYKY
Trigger: GTACTTGTAGCCTGGATAGCAGACTGTGTTCAACTT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGCTGTGCAATCTGGATTaGATAGAAATAGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMLCNLD*IEIALR
Trigger: CCTCAAGGCTATTTCTATCCAATCCAGATTGCACAG...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCACGGGTCACCATAATTaGCCAGCCACCTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCTGHHN*PATFLI
Trigger: GATGAGAAAGGTGGCTGGCCAATTATGGTGACCCGT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGAAATGGCTTGCCCTTaGGCCATGGCAGAATACCAT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCEMACP*AMAEYH
Trigger: ATGGTATTCTGCCATGGCCCAAGGGCAAGCCATTTC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGAAGTTTGAGAACCACTaGTCTGTACTGACAATGCTG +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMKFENH*SVLTML
Trigger: CAGCATTGTCAGTACAGACCAGTGGTTCTCAAACTT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTCATCCAGAAACTTTTaGCTGGTTTTACAACTGAAG +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNSSRNF*LVLQLK
Trigger: CTTCAGTTGTAAAACCAGCCAAAAGTTTCTGGATGA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGCGCTGGATGGTTCGTaGATGAAGCCTTTATGTACA +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLALDGS*MKPLCT
Trigger: TGTACATAAAGGCTTCATCCACGAACCATCCAGCGC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCAGAAGGAGCCACGTCTaGAGAGTTGTGCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCRRSHV*RVVLVS
Trigger: TGACACAAGCACAACTCTCCAGACGTGGCTCCTTCT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCTGGCTCTAAAGACTTaGACCCTTCCCCTAACTTAC +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCLALKT*TLPLTY
Trigger: GTAAGTTAGGGGAAGGGTTCAAGTCTTTAGAGCCAG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCGAAACTGTATAGGGTaGTGGGCAAGGCAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCRNCIG*WARQSE
Trigger: TTCACTTTGCCTTGCCCATCACCCTATACAGTTTCG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGGTTTTATTTAATGCCTaGAGCCCTATAGCAGACACT +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMVLFNA*SPIADT
Trigger: AGTGTCTGCTATAGGGCTTCAGGCATTAAATAAAAC...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGACCACTGGTCTGTACTaGCAATGCTGCTATAGATTC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLTTGLY*QCCYRF
Trigger: GAATCTATAGCAGCATTGTCAGTACAGACCAGTGGT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCATAGTTGACCCGAGCTaGCAAGCAACGCATATTCAG +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCIVDPS*QATHIQ
Trigger: CTGAATATGCGTTGCTTGGCAGCTCGGGTCAACTAT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGCTGTTCCTGAGGGAATaGTTCCTCAGACTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLLFLRE*FLRLLF
Trigger: AAACAACAGTCTGAGGAAGCATTCCCTCAGGAACAG...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTTTGTCTCTGTCTTCTaGTGTTTCATATACCTCTAT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNFVSVF*CFIYLY
Trigger: ATAGAGGTATATGAAACAGCAGAAGACAGAGACAAA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTTCACTGGTTTCTGGTaGAATAAACTGTTTGACATT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNFTGFW*NKLFDI
Trigger: AATGTCAAACAGTTTATTGCACCAGAAACCAGTGAA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACACATTGTGCTTAAACTaGAAAGTCTGTACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNTLCLN*KVCTAL
Trigger: TAAAGCTGTACAGACTTTGCAGTTTAAGCACAATGT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGAACGCCGTGGAAACTaGATTGCTTTGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCERRGN*IALSLE
Trigger: TTCCAGTGACAAAGCAATCCAGTTTCCACGGCGTTC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTCTGTGCATAGACTTTaGAATAGCTATGAGAGAATT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNSVHRL*NSYERI
Trigger: AATTCTCTCATAGCTATTCCAAAGTCTATGCACAGA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGCTGATTCTTTTCTGTaGTCTCTAGAACCACGGACA +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLADSFL*SLEPRT
Trigger: TGTCCGTGGTTCTAGAGACCACAGAAAAGAATCAGC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGTGCTCCATGAAGTTCTaGGCCCAATGCCATAGTATA +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLCSMKF*AQCHSI
Trigger: TATACTATGGCATTGGGCCCAGAACTTCATGGAGCA...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACAAATTAAGAAGAGTGTaGTCACATCAATTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNKLRRV*SHQLGV
Trigger: AACTCCCAATTGATGTGACCACACTCTTCTTAATTT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGATTGTATGGGGGCTCTaGAATCTATTTATGTGCGGT +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLIVWGL*NLFMCG
Trigger: ACCGCACATAAATAGATTTCAGAGCCCCCATACAAT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCCGTGGAAACTGGATTaGTTTGTCACTGGAACACTT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCPWKLD*FVTGTL
Trigger: AAGTGTTCCAGTGACAAAGCAATCCAGTTTCCACGG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCATAGGGGGCTCTCTGTaGATAGACTTTGGAATAGCT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCIGGSL*IDFGIA
Trigger: AGCTATTCCAAAGTCTATGCACAGAGAGCCCCCTAT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGAAGTTCTGGGCCCAATaGCATAGTATATATCTCTTT +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMKFWAQ*HSIYLF
Trigger: AAAGAGATATATACTATGGCATTGGGCCCAGAACTT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGCACAAGAAATCAACTTaGTGTTGCAATGTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLHKKST*CCNVEG
Trigger: GCCTTCCACATTGCAACAGCAAGTTGATTTCTTGTG...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCTTTCAGTGAGAGTCTaGACTGAGAAAGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCLSVRV*TEKGEG
Trigger: TCCTTCTCCTTTCTCAGTGCAGACTCTCACTGAAAG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGAACATGTGCACATTGTaGTTAAACTGCAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMNMCTL*LNCKVC
Trigger: ACAGACTTTGCAGTTTAAGCACAATGTGCACATGTT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGCTGATTCTTTTCTGTaGTCTCTAGAACCACGGACA +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCADSFL*SLEPRT
Trigger: TGTCCGTGGTTCTAGAGACCACAGAAAAGAATCAGC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGAGAGCTAGGTGTGGTTaGATATTCTTCATACCAGTC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLRARCG*IFFIPV
Trigger: GACTGGTATGAAGAATATCCAACCACACCTAGCTCT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGAAATTCTTTGAAGACTaGGGACTCATCAATGGTACT +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMKFFED*GLINGT
Trigger: AGTACCATTGATGAGTCCCCAGTCTTCAAAGAATTT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGAGGCAAAAATGCAATaGATAGTCCAGGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCEAKMQ*IVQGSV
Trigger: AACACTGCCCTGGACTATCCATTGCATTTTTGCCTC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGTCATCCAGAAACTTTTaGCTGGTTTTACAACTGAAG +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMSSRNF*LVLQLK
Trigger: CTTCAGTTGTAAAACCAGCCAAAAGTTTCTGGATGA...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCATTGTATGGGGGCTCTaGAATCTATTTATGTGCGGT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCIVWGL*NLFMCG
Trigger: ACCGCACATAAATAGATTTCAGAGCCCCCATACAAT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGGAGAAAGTTTATTTTaGACATCGGCACTGGGAATA +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLGESLF*TSALGI
Trigger: TATTCCCAGTGCCGATGTTCAAAATAAACTTTCTCC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGTCGAGTCTCATAATCTaGAGACCAGTATGCAAACAA +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLSSLII*RPVCKQ
Trigger: TTGTTTGCATACTGGTCTTCAGATTATGAGACTCGA...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGTTTGTCTCTGTCTTCTaGTGTTTCATATACCTCTAT +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMFVSVF*CFIYLY
Trigger: ATAGAGGTATATGAAACAGCAGAAGACAGAGACAAA...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGTTCACTGGTTTCTGGTaGAATAAACTGTTTGACATT +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMFTGFW*NKLFDI
Trigger: AATGTCAAACAGTTTATTGCACCAGAAACCAGTGAA...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGAATCCCTTACCTTTTaGAATCAACCTAACCACCTT +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLESLTF*NQPNHL
Trigger: AAGGTGGTTAGGTTGATTGCAAAAGGTAAGGGATTC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGCTCATACAAGGACCTTaGTTCTTTTCCGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLLIQGP*FFSEFF
Trigger: GAAAAACTCGGAAAAGAAGCAAGGTCCTTGTATGAG...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGACCCAACCCATGGAATaGAATTATTTTAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLTQPME*NYFRRL
Trigger: CAGCCTTCTAAAATAATTGCATTCCATGGGTTGGGT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGACCTTCACTGGTTTCTaGTGCAATAAACTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLTFTGF*CNKLFD
Trigger: GTCAAACAGTTTATTGCACCAGAAACCAGTGAAGGT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGAAAAGGTTCCCAGACTaGAGAAAGTTTATTTTGAAC +
Preference number: 4 (lower is better)
Translates to: VQICIFFASAPFDANIYMKRFPD*RKFILN
Trigger: GTTCAAAATAAACTTTCTCCAGTCTGGGAACCTTTT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTCTTTCCTTCTTCAGTaGAAAAGGACAGCCACATTG +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCSFLLQ*KRTATL
Trigger: CAATGTGGCTGTCCTTTTCCACTGAAGAAGGAAAGA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCAAGTTTGAGAACCACTaGTCTGTACTGACAATGCTG +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCKFENH*SVLTML
Trigger: CAGCATTGTCAGTACAGACCAGTGGTTCTCAAACTT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGCAATTTCTTCATATTTaGGCCCTAACACCTTACTTC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLQFLHI*ALTPYF
Trigger: GAAGTAAGGTGTTAGGGCTCAAATATGAAGAAATTG...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCATTTCTCAACCCAAGTaGATGGAAGAAAGACTTCGT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCISQPK*MEERLR
Trigger: ACGAAGTCTTTCTTCCATTCACTTGGGTTGAGAAAT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTCATATACCTCTATGTaGGGAGGTTTCTCAGTTAGA +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCSYTSM*GGFSVR
Trigger: TCTAACTGAGAAACCTCCTCACATAGAGGTATATGA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTGTATAGTGAAGAGCTaGTTCTTTTCTGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCCIVKS*FFSVVS
Trigger: AGAGACCACAGAAAAGAATCAGCTCTTCACTATACA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGTTTTATTTAATGCCTaGAGCCCTATAGCAGACACT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCVLFNA*SPIADT
Trigger: AGTGTCTGCTATAGGGCTTCAGGCATTAAATAAAAC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTCGAGTCTCATAATCTaGAGACCAGTATGCAAACAA +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCSSLII*RPVCKQ
Trigger: TTGTTTGCATACTGGTCTTCAGATTATGAGACTCGA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGTGCATCAGAATCACTTaGATGCTCATTACAAATGCA +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLCIRIT*MLITNA
Trigger: TGCATTTGTAATGAGCATTCAAGTGATTCTGATGCA...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGAAGTTCTGGGCCCAATaGCATAGTATATATCTCTTT +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLKFWAQ*HSIYLF
Trigger: AAAGAGATATATACTATGGCATTGGGCCCAGAACTT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGACAGCTTTAACTCCATaGTGCTCAGATAGAAACTTA +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLTALTP*CSDRNL
Trigger: TAAGTTTCTATCTGAGCAGCATGGAGTTAAAGCTGT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGAAATTCTTTGAAGACTaGGGACTCATCAATGGTACT +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLKFFED*GLINGT
Trigger: AGTACCATTGATGAGTCCCCAGTCTTCAAAGAATTT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR TCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGGCTGGTTTTACAACTaGAGTAGCAATAGATTTAAC +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCGWFYN*SSNRFN
Trigger: GTTAAATCTATTGCTACTTCAGTTGTAAAACCAGCC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTGTGGTCACATCAATTaGGAGTTCAAGCTTACTTTT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCCGHIN*EFKLTF
Trigger: AAAAGTAAGCTTGAACTCCCAATTGATGTGACCACA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CCA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGAAAAGGTTCCCAGACTaGAGAAAGTTTATTTTGAAC +
Preference number: 4 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLKRFPD*RKFILN
Trigger: GTTCAAAATAAACTTTCTCCAGTCTGGGAACCTTTT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR GCA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTCAGAATCACTTGAATaGTCATTACAAATGCAGACT +
Preference number: 4 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCSESLE*SLQMQT
Trigger: AGTCTGCATTTGTAATGAGCATTCAAGTGATTCTGA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS TCA 90 bp CCTGCGGTGCCGCAGCTCCAGCCTCTCGGCAAGGAAGCGCTTGTGTaGGGAGAGCCCTCCCGCTCCGCGCGCAGCCGGGAGACCGAGCCA +
Preference number: 5 (lower is better)
Translates to: PAVPQLQPLGKEALV*GEPSRSARSRETEP
Trigger: TGGCTCGGTCTCCCGGCTGCGCGCGGAGCGGGAGGGCTCTCCTCACACAAGCGCTTCCTTGCCGAGAGGCTGGAGCTGCGGCACCGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS-3UTR CAA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAGAAATGGCTTGCCCTaGGGCCATGGCAGAATACCA +
Preference number: 5 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPARNGLP*GHGRIP
Trigger: TGGTATTCTGCCATGGCCCAAGGGCAAGCCATTTCT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAGCAGACACTGCCCATaGTATGGGGGCTCTGAAATC +
Preference number: 5 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPASRHCP*YGGSEI
Trigger: GATTTCAGAGCCCCCATACAATGGGCAGTGTCTGCT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTGCTTCCTCAGACTGTaGTTTGGCCACGTGGTTCAT +
Preference number: 5 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPACFLRL*FGHVVH
Trigger: ATGAACCACGTGGCCAAACAACAGTCTGAGGAAGCA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS TCA 90 bp TGCTCTCCTGAGACAGAGCCTGTAGTTTCTGTGTACAGCAGAGGCTaGAGTGCAGTTTTGGTTGTGAGCTCTAGTTGTGCTTTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CSPETEPVVSVYSRG*SAVLVVSSSCALPC
Trigger: GCAGGGCAAAGCACAACTAGAGCTCACAACCAAAACTGCACTTCAGCCTCTGCTGTACACAGAAACTACAGGCTCTGTCTCAGGAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS GCA 90 bp GAAGCCCCCAACAACAGGGGGTGCTTTCTGCTGTTCCTGAGGGAATaGTTCCTCAGACTGTTGTTTGGCCACGTGGTTCATATAGTTGTT +
Preference number: 5 (lower is better)
Translates to: EAPNNRGCFLLFLRE*FLRLLFGHVVHIVV
Trigger: AACAACTATATGAACCACGTGGCCAAACAACAGTCTGAGGAAGCATTCCCTCAGGAACAGCAGAAAGCACCCCCTGTTGTTGGGGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS TCA 90 bp AGGAGCGATGCCAAGCATGAAGTGACGGAGGTCATAGATGGTTCCTaGGCCAGTGTCATACAAGGGCAGCATGGCTTTAAGAGATTCCAT +
Preference number: 5 (lower is better)
Translates to: RSDAKHEVTEVIDGS*ASVIQGQHGFKRFH
Trigger: ATGGAATCTCTTAAAGCCATGCTGCCCTTGTATGACACTGGCTCAGGAACCATCTATGACCTCCGTCACTTCATGCTTGGCATCGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS GCA 90 bp CACCTTACTTCCCACATTGCTATTGAAGCCCCCAACAACAGGGGGTaGTTTCTGCTGTTCCTGAGGGAATGCTTCCTCAGACTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: HLTSHIAIEAPNNRG*FLLFLRECFLRLLF
Trigger: AAACAACAGTCTGAGGAAGCATTCCCTCAGGAACAGCAGAAAGCACCCCCTGTTGTTGGGGGCTTCAATAGCAATGTGGGAAGTAAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGTAAGTGCTAGACAGTaGGCCAGTAGCAACTACTTA +
Preference number: 5 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAVSARQ*ASSNYL
Trigger: TAAGTAGTTGCTACTGGCCAACTGTCTAGCACTTAC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTAGATCTGTATCTTCTTaGCTTCTGCCCCCTTTGATG +
Preference number: 5 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPARSVSS*LLPPLM
Trigger: CATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCT...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTGAAATCAACTTGCTGTaGCAATGTGGAAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAEINLL*QCGRQC
Trigger: ACACTGCCTTCCACATTGCAACAGCAAGTTGATTTC...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS TCA 90 bp CACCTTCTTGGGCATTATTTTGGTTGGCTTGACAGCTTTTGTGTTTaGAAGACCCACTCCTTTCCTGAGGTCAGTGACCAGGTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: HLLGHYFGWLDSFCV*KTHSFPEVSDQVPG
Trigger: ACCAGGGACCTGGTCACTGACCTCAGGAAAGGAGTGGGTCTTTCAAACACAAAAGCTGTCAAGCCAACCAAAATAATGCCCAAGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CCA 90 bp GTGCTTTCTGCTGTTCCTGAGGGAATGCTTCCTCAGACTGTTGTTTaGCCACGTGGTTCATATAGTTGTTACTCTCAGATGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: VLSAVPEGMLPQTVV*PRGSYSCYSQMLLL
Trigger: GAGCAGCAGCATCTGAGAGTAACAACTATATGAACCACGTGGCCAAACAACAGTCTGAGGAAGCATTCCCTCAGGAACAGCAGAAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTTTTGTGTTTCCCAGTaGCAAGGATACACCTTCACT +
Preference number: 5 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAFCVSQ*QGYTFT
Trigger: AGTGAAGGTGTATCCTTGCAACTGGGAAACACAAAA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS GCA 90 bp CCCATCCACTCTGAAGCCACTACTCGAACGCCGTGGAAACTGGATTaGTTTGTCACTGGAACACTTATTCCACAAAAGTACTGTGACCAA +
Preference number: 5 (lower is better)
Translates to: PIHSEATTRTPWKLD*FVTGTLIPQKYCDQ
Trigger: TTGGTCACAGTACTTTTGTGGAATAAGTGTTCCAGTGACAAAGCAATCCAGTTTCCACGGCGTTCGAGTAGTGGCTTCAGAGTGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CCA 90 bp GTGACCATTAACATTTTGGTAGAAGTTTGGCTTTGGGAAGTGCTCTaGAGCTTCTTCTCAGTCCAACCACCAAGCTGGTCATCAGCGGTT +
Preference number: 5 (lower is better)
Translates to: VTINILVEVWLWEVL*SFFSVQPPSWSSAV
Trigger: AACCGCTGATGACCAGCTTGGTGGTTGGACTGAGAAGAAGCTCCAGAGCACTTCCCAAAGCCAAACTTCTACCAAAATGTTAATGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CCA 90 bp GATGAGGCAAAACTTTGTGCCCAATTCATTCAACTTTTGAAGCGTTaGTTGTGCGACGCATTGTCAGGCATTGTTGTGCCGAAGGACTGG +
Preference number: 5 (lower is better)
Translates to: DEAKLCAQFIQLLKR*LCDALSGIVVPKDW
Trigger: CCAGTCCTTCGGCACAACAATGCCTGACAATGCGTCGCACAACCAACGCTTCAAAAGTTGAATGAATTGGGCACAAAGTTTTGCCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACAGCAGACACTGCCCATaGTATGGGGGCTCTGAAATC +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNSRHCP*YGGSEI
Trigger: GATTTCAGAGCCCCCATACAATGGGCAGTGTCTGCT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GCAAAAATGCAATGGATAGTCCAGGGCAGTGTTCCTCCCTGTATGCCCCCAGCTTGGAGAAAGTTTATTTaGAACATCGGCACTGGGAAT +
Preference number: 5 (lower is better)
Translates to: AKMQWIVQGSVPPCMPPAWRKFI*NIGTGN
Trigger: ATTCCCAGTGCCGATGTTCAAAATAAACTTTCTCCA...AGCTGGGGGCATACAGGGAGGAACACTGCCCTGGACTATCCATTGCATTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS GCA 90 bp GAACCACCACTGCACTGTACCTTTGTTAGCAATTTCTGGGCCAAATaGATTGTTGATGCTGCGAGTTGTCTCTGCTGCTTTATGACCCAT +
Preference number: 5 (lower is better)
Translates to: EPPLHCTFVSNFWAK*IVDAASCLCCFMTH
Trigger: ATGGGTCATAAAGCAGCAGAGACAACTCGCAGCATCAACAATGCATTTGGCCCAGAAATTGCTAACAAAGGTACAGTGCAGTGGTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CCA 90 bp TCAAACCCATCCACTCTGAAGCCACTACTCGAACGCCGTGGAAACTaGATTGCTTTGTCACTGGAACACTTATTCCACAAAAGTACTGTG +
Preference number: 5 (lower is better)
Translates to: SNPSTLKPLLERRGN*IALSLEHLFHKSTV
Trigger: CACAGTACTTTTGTGGAATAAGTGTTCCAGTGACAAAGCAATCCAGTTTCCACGGCGTTCGAGTAGTGGCTTCAGAGTGGATGGGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CCA 90 bp GGTGAATCTAGACTTATCAGCCACATTCGCCATAAAGCAGCCCTTTaGCACAGTCCAGTCATTAGGCTTGTTTTTGTCTCTGTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GESRLISHIRHKAAL*HSPVIRLVFVSVFC
Trigger: GCAGAAGACAGAGACAAAAACAAGCCTAATGACTGGACTGTGCCAAAGGGCTGCTTTATGGCGAATGTGGCTGATAAGTCTAGATTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CCA 90 bp GCAGCAGACCATCAAACAGTGACCATTAACATTTTGGTAGAAGTTTaGCTTTGGGAAGTGCTCTGGAGCTTCTTCTCAGTCCAACCACCA +
Preference number: 5 (lower is better)
Translates to: AADHQTVTINILVEV*LWEVLWSFFSVQPP
Trigger: TGGTGGTTGGACTGAGAAGAAGCTCCAGAGCACTTCCCAAAGCCAAACTTCTACCAAAATGTTAATGGTCACTGTTTGATGGTCTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGCCGTGGAAACTGGATaGCTTTGTCACTGGAACACT +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNAVETG*LCHWNT
Trigger: AGTGTTCCAGTGACAAAGCAATCCAGTTTCCACGGC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGTGTCATTTTTGCACTaGCTTCTGTGCGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNVSFLH*LLCAGW
Trigger: CCATCCAGCGCACAGAAGCAAGTGCAAAAATGACAC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS TCA 90 bp TCCTTTCCTGAGGTCAGTGACCAGGTCCCTGGTAACTGTGCTCCATaGAGTTCTGGGCCCAATGCCATAGTATATATCTCTTTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: SFPEVSDQVPGNCAP*SSGPNAIVYISFFK
Trigger: TTTAAAGAAAGAGATATATACTATGGCATTGGGCCCAGAACTTCATGGAGCACAGTTACCAGGGACCTGGTCACTGACCTCAGGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS TCA 90 bp GCTGAGATGCTTGAAGAAGTGGTAGTCAGTTGGCAAGAAGTCAGGTaGATACGGTGGATGAGGCAAAACTTTGTGCCCAATTCATTCAAC +
Preference number: 5 (lower is better)
Translates to: AEMLEEVVVSWQEVR*IRWMRQNFVPNSFN
Trigger: GTTGAATGAATTGGGCACAAAGTTTTGCCTCATCCACCGTATTCACCTGACTTCTTGCCAACTGACTACCACTTCTTCAAGCATCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS GCA 90 bp TCTTCACGGCTCTCGTCTCCTTTGCAAAAGTTCTTGAACCACCACTaGACTGTACCTTTGTTAGCAATTTCTGGGCCAAATGCATTGTTG +
Preference number: 5 (lower is better)
Translates to: SSRLSSPLQKFLNHH*TVPLLAISGPNALL
Trigger: CAACAATGCATTTGGCCCAGAAATTGCTAACAAAGGTACAGTGCAGTGGTGGTTCAAGAACTTTTGCAAAGGAGACGAGAGCCGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACACCTTACTTCCCACATaGCTATTGAAGCCCCCAACA +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNTLLPT*LLKPPT
Trigger: TGTTGGGGGCTTCAATAGCAATGTGGGAAGTAAGGT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS GCA 90 bp GGCTGTGGTAGAGATGGTAATGTTGTCGAGGAATCCCTTACCTTTTaGAATCAACCTAACCACCTTCTTGGGCATTATTTTGGTTGGCTT +
Preference number: 5 (lower is better)
Translates to: GCGRDGNVVEESLTF*NQPNHLLGHYFGWL
Trigger: AAGCCAACCAAAATAATGCCCAAGAAGGTGGTTAGGTTGATTGCAAAAGGTAAGGGATTCCTCGACAACATTACCATCTCTACCACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGTAGAGATGGTAATGTaGTCGAGGAATCCCTTACCT +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNVEMVM*SRNPLP
Trigger: AGGTAAGGGATTCCTCGACAACATTACCATCTCTAC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGAAATCAACTTGCTGTaGCAATGTGGAAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNEINLL*QCGRQC
Trigger: ACACTGCCTTCCACATTGCAACAGCAAGTTGATTTC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGGTGTCATTTTTGCACTaGCTTCTGTGCGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: VQICIFFASAPFDANIYMVSFLH*LLCAGW
Trigger: CCATCCAGCGCACAGAAGCAAGTGCAAAAATGACAC...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACGGAAACTGGATTGCTTaGTCACTGGAACACTTATTC +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNGNWIA*SLEHLF
Trigger: GAATAAGTGTTCCAGTGACAAAGCAATCCAGTTTCC...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGCTTCCCACATTGCTATaGAAGCCCCCAACAACAGGG +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLLPTLL*KPPTTG
Trigger: CCCTGTTGTTGGGGGCTTCAATAGCAATGTGGGAAG...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGCCTGGCTCTAAAGACTaGAACCCTTCCCCTAACTTA +
Preference number: 5 (lower is better)
Translates to: VQICIFFASAPFDANIYMPGSKD*NPSPNL
Trigger: TAAGTTAGGGGAAGGGTTCAAGTCTTTAGAGCCAGG...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGAGAAATGGCTTGCCCTaGGGCCATGGCAGAATACCA +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLRNGLP*GHGRIP
Trigger: TGGTATTCTGCCATGGCCCAAGGGCAAGCCATTTCT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACCTCTTGACAAATTCTTaGAAGACTGGGGACTCATCA +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNLLTNS*KTGDSS
Trigger: TGATGAGTCCCCAGTCTTCAAAGAATTTGTCAAGAG...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGCTGTCACAATGGGGGTaGGGAAGGGATATACTGATT +
Preference number: 5 (lower is better)
Translates to: VQICIFFASAPFDANIYMLSQWG*GRDILI
Trigger: AATCAGTATATCCCTTCCCAACCCCCATTGTGACAG...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CCA 90 bp GTGATCTGGGATTCGATAAACTCTTGGAAAGCTTTTTCTGCATTCTaGTTGTGGAAACATCTTCCCTGCAAAAAGTTGCTGAGATGCTTG +
Preference number: 5 (lower is better)
Translates to: VIWDSINSWKAFSAF*LWKHLPCKKLLRCL
Trigger: CAAGCATCTCAGCAACTTTTTGCAGGGAAGATGTTTCCACAACCAGAATGCAGAAAAAGCTTTCCAAGAGTTTATCGAATCCCAGATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS-3UTR CAA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGGTAGAGATGGTAATGTaGTCGAGGAATCCCTTACCT +
Preference number: 5 (lower is better)
Translates to: VQICIFFASAPFDANIYMVEMVM*SRNPLP
Trigger: AGGTAAGGGATTCCTCGACAACATTACCATCTCTAC...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACACTAACATGTGCACATaGTGCTTAAACTGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNTNMCT*CLNCKV
Trigger: GACTTTGCAGTTTAAGCACAATGTGCACATGTTAGT...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS TCA 90 bp ACCCACTTATCGAGCTTTTACAACCTTCTAATTTGCTTCAAATGCTaGATGACCGTAGGATGGTTGATGTTGAGTTCTCGGCAACTTCTA +
Preference number: 5 (lower is better)
Translates to: THLSSFYNLLICFKC*MTVGWLMLSSRQLL
Trigger: TAGAAGTTGCCGAGAACTCAACATCAACCATCCTACGGTCATTCAGCATTTGAAGCAAATTAGAAGGTTGTAAAAGCTCGATAAGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS TCA 90 bp ATCATATCCAGACATTACAAGCCTATTCCTAATACCATTCCTCACTaGTTTACTTCTGGGGGATCTTACAGGGTTATCAGGAAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: IISRHYKPIPNTIPH*FTSGGSYRVIRKLW
Trigger: CCACAACTTCCTGATAACCCTGTAAGATCCCCCAGAAGTAAATCAGTGAGGAATGGTATTAGGAATAGGCTTGTAATGTCTGGATATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559500.1
CDS GCA 90 bp ACTGGAACACTTATTCCACAAAAGTACTGTGACCAAAGTGAAGAGTaGGCAGATAATAATCAAAGTCTTATAGTTGACCCGAGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: TGTLIPQKYCDQSEE*ADNNQSLIVDPSCQ
Trigger: TTGGCAGCTCGGGTCAACTATAAGACTTTGATTATTATCTGCGCACTCTTCACTTTGGTCACAGTACTTTTGTGGAATAAGTGTTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CCA 90 bp TGGGATTCGATAAACTCTTGGAAAGCTTTTTCTGCATTCTGGTTGTaGAAACATCTTCCCTGCAAAAAGTTGCTGAGATGCTTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: WDSINSWKAFSAFWL*KHLPCKKLLRCLKK
Trigger: CTTCTTCAAGCATCTCAGCAACTTTTTGCAGGGAAGATGTTTCCACAACCAGAATGCAGAAAAAGCTTTCCAAGAGTTTATCGAATCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTGCTTCCTCAGACTGTaGTTTGGCCACGTGGTTCAT +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCCFLRL*FGHVVH
Trigger: ATGAACCACGTGGCCAAACAACAGTCTGAGGAAGCA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGACCTTACTTCCCACATaGCTATTGAAGCCCCCAACA +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLTLLPT*LLKPPT
Trigger: TGTTGGGGGCTTCAATAGCAATGTGGGAAGTAAGGT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGACTGTGCAATCTGGATaGGATAGAAATAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VQICIFFASAPFDANIYMTVQSG*DRNSLE
Trigger: CTCAAGGCTATTTCTATCCAATCCAGATTGCACAGT...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGTTTTGTGTTTCCCAGTaGCAAGGATACACCTTCACT +
Preference number: 5 (lower is better)
Translates to: VQICIFFASAPFDANIYMFCVSQ*QGYTFT
Trigger: AGTGAAGGTGTATCCTTGCAACTGGGAAACACAAAA...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGCTGTCACAATGGGGGTaGGGAAGGGATATACTGATT +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLLSQWG*GRDILI
Trigger: AATCAGTATATCCCTTCCCAACCCCCATTGTGACAG...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp CAAAGTCTGTACAGCTTTACAAAGGACTACCCTTCAGAAGGGCATCCTGTAAACTTCATCCAGAAACTTTaGGCTGGTTTTACAACTGAA +
Preference number: 5 (lower is better)
Translates to: QSLYSFTKDYPSEGHPVNFIQKL*AGFTTE
Trigger: TTCAGTTGTAAAACCAGCCAAAAGTTTCTGGATGAA...GTTTACAGGATGCCCTTCTGAAGGGTAGTCCTTTGTAAAGCTGTACAGACTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGTGGATAGAAATAGCCTaGAGGTCCCCATTGTGTAGA +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLWIEIA*RSPLCR
Trigger: TCTACACAATGGGGACCTCAAGGCTATTTCTATCCA...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGTTCTTGGGCATTATTTaGGTTGGCTTGACAGCTTTT +
Preference number: 5 (lower is better)
Translates to: VQICIFFASAPFDANIYMFLGII*VGLTAF
Trigger: AAAAGCTGTCAAGCCAACCAAAATAATGCCCAAGAA...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCCTGGCTCTAAAGACTaGAACCCTTCCCCTAACTTA +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCPGSKD*NPSPNL
Trigger: TAAGTTAGGGGAAGGGTTCAAGTCTTTAGAGCCAGG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTGCAGATCTGTATCTTCTTTGCTTCTGCCCCCTTTGATGCTAACATATATATGCTGCATCAGAATCACTaGAATGCTCATTACAAATGC +
Preference number: 5 (lower is better)
Translates to: VQICIFFASAPFDANIYMLHQNH*NAHYKC
Trigger: GCATTTGTAATGAGCATTCAAGTGATTCTGATGCAG...CATATATATGTTAGCATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTGGATAGAAATAGCCTaGAGGTCCCCATTGTGTAGA +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCWIEIA*RSPLCR
Trigger: TCTACACAATGGGGACCTCAAGGCTATTTCTATCCA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGACTGTGCAATCTGGATaGGATAGAAATAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLTVQSG*DRNSLE
Trigger: CTCAAGGCTATTTCTATCCAATCCAGATTGCACAGT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCAGATCTGTATCTTCTTaGCTTCTGCCCCCTTTGATG +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCRSVSS*LLPPLM
Trigger: CATCAAAGGGGGCAGAAGCAAAGAAGATACAGATCT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGTGTGGTCACATCAATaGGGAGTTCAAGCTTACTTT +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLVWSHQ*GVQAYF
Trigger: AAAGTAAGCTTGAACTCCCAATTGATGTGACCACAC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGTTAAGGCACGATATTaGTCACAGAAGCAGTACCAT +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLVKARY*SQKQYH
Trigger: ATGGTACTGCTTCTGTGACAAATATCGTGCCTTAAC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGTCACAAGAAATCAACTaGCTGTTGCAATGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLSQEIN*LLQCGR
Trigger: CCTTCCACATTGCAACAGCAAGTTGATTTCTTGTGA...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS GCA 90 bp CTGTTTCATATACCTCTATGTGAGGAGGTTTCTCAGTTAGATTCTTaGTGTAATGACTTAATCCATACTGTGCAATCTGGATTGGATAGA +
Preference number: 5 (lower is better)
Translates to: LFHIPLCEEVSQLDS*CNDLIHTVQSGLDR
Trigger: TCTATCCAATCCAGATTGCACAGTATGGATTAAGTCATTACAGCAAGAATCTAACTGAGAAACCTCCTCACATAGAGGTATATGAAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGTCATTAGGCTTGTTTTaGTCTCTGTCTTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLSLGLF*SLSSAV
Trigger: AACAGCAGAAGACAGAGACAAAAACAAGCCTAATGA...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGGGAGACCAGATATTCTaGCTGAGACATCTAACATAT +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLGDQIF*LRHLTY
Trigger: ATATGTTAGATGTCTCAGCAAGAATATCTGGTCTCC...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGTTAAGGCACGATATTaGTCACAGAAGCAGTACCAT +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCVKARY*SQKQYH
Trigger: ATGGTACTGCTTCTGTGACAAATATCGTGCCTTAAC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp GTAAAATATGGTGGTGGCCTTAAAGCTACTAGCTCCTTTCCAAATTTAGATTTGACTAACATGTGCACATaGTGCTTAAACTGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: VKYGGGLKATSSFPNLDLTNMCT*CLNCKV
Trigger: GACTTTGCAGTTTAAGCACAATGTGCACATGTTAGT...CAAATCTAAATTTGGAAAGGAGCTAGTAGCTTTAAGGCCACCACCATATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTCATTAGGCTTGTTTTaGTCTCTGTCTTCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCSLGLF*SLSSAV
Trigger: AACAGCAGAAGACAGAGACAAAAACAAGCCTAATGA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTCACAGATAAATGTATaGTGTTTGTCAGACTCGGTC +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCSQINV*CLSDSV
Trigger: GACCGAGTCTGACAAACACAATACATTTATCTGTGA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTTGCTTCTGCCCCCTTaGATGCTAACATATATATGT +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCLLLPP*MLTYIC
Trigger: ACATATATATGTTAGCATCAAAGGGGGCAGAAGCAA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCGGAGACCAGATATTCTaGCTGAGACATCTAACATAT +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCGDQIF*LRHLTY
Trigger: ATATGTTAGATGTCTCAGCAAGAATATCTGGTCTCC...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCAAAAGGACAGCCACATaGTTAAGGCACGATATTTGT +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCKRTAT*LRHDIC
Trigger: ACAAATATCGTGCCTTAACAATGTGGCTGTCCTTTT...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCCTGCATCAGAATCACTaGAATGCTCATTACAAATGC +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCLHQNH*NAHYKC
Trigger: GCATTTGTAATGAGCATTCAAGTGATTCTGATGCAG...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS-3UTR CAA 90 bp TGCGGTATAGGAGGATATGTATACCTAAATAAAGATCTGATTACACATAAGTGCTTCATCCAGAAACTTTaGGCTGGTTTTACAACTGAA +
Preference number: 5 (lower is better)
Translates to: CGIGGYVYLNKDLITHKCFIQKL*AGFTTE
Trigger: TTCAGTTGTAAAACCAGCCAAAAGTTTCTGGATGAA...GCACTTATGTGTAATCAGATCTTTATTTAGGTATACATATCCTCCTATACCGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CAA 90 bp TCAGGCCTGCGGTGCCGCAGCTCCAGCCTCTCGGCAAGGAAGCGCTaGTGTGAGGAGAGCCCTCCCGCTCCGCGCGCAGCCGGGAGACCG +
Preference number: 6 (lower is better)
Translates to: SGLRCRSSSLSARKR*CEESPPAPRAAGRP
Trigger: CGGTCTCCCGGCTGCGCGCGGAGCGGGAGGGCTCTCCTCACACAAGCGCTTCCTTGCCGAGAGGCTGGAGCTGCGGCACCGCAGGCCTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS TCA 72 bp CCGCAGCTCCAGCCTCTCGGCAAGGAAGCGCTTGTGTaGGGAGAGCCCTCCCGCTCCGCGCGCAGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: PQLQPLGKEALV*GEPSRSARSRE
Trigger: CTCCCGGCTGCGCGCGGAGCGGGAGGGCTCTCCTCACACAAGCGCTTCCTTGCCGAGAGGCTGGAGCTGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CAA 72 bp CGGTGCCGCAGCTCCAGCCTCTCGGCAAGGAAGCGCTaGTGTGAGGAGAGCCCTCCCGCTCCGCGCGCAGCC +
Preference number: 6 (lower is better)
Translates to: RCRSSSLSARKR*CEESPPAPRAA
Trigger: GGCTGCGCGCGGAGCGGGAGGGCTCTCCTCACACAAGCGCTTCCTTGCCGAGAGGCTGGAGCTGCGGCACCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CAA 90 bp GCTTGCCCTTGGGCCATGGCAGAATACCATCCTGGCTCTAAAGACTaGAACCCTTCCCCTAACTTACGGGTCACCATAATTGGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: ACPWAMAEYHPGSKD*NPSPNLRVTIIGQP
Trigger: TGGCTGGCCAATTATGGTGACCCGTAAGTTAGGGGAAGGGTTCAAGTCTTTAGAGCCAGGATGGTATTCTGCCATGGCCCAAGGGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS GCA 72 bp TCCCACATTGCTATTGAAGCCCCCAACAACAGGGGGTaGTTTCTGCTGTTCCTGAGGGAATGCTTCCTCAGA +
Preference number: 6 (lower is better)
Translates to: SHIAIEAPNNRG*FLLFLRECFLR
Trigger: TCTGAGGAAGCATTCCCTCAGGAACAGCAGAAAGCACCCCCTGTTGTTGGGGGCTTCAATAGCAATGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS TCA 72 bp GCCAAGCATGAAGTGACGGAGGTCATAGATGGTTCCTaGGCCAGTGTCATACAAGGGCAGCATGGCTTTAAG +
Preference number: 6 (lower is better)
Translates to: AKHEVTEVIDGS*ASVIQGQHGFK
Trigger: CTTAAAGCCATGCTGCCCTTGTATGACACTGGCTCAGGAACCATCTATGACCTCCGTCACTTCATGCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS GCA 72 bp AACAACAGGGGGTGCTTTCTGCTGTTCCTGAGGGAATaGTTCCTCAGACTGTTGTTTGGCCACGTGGTTCAT +
Preference number: 6 (lower is better)
Translates to: NNRGCFLLFLRE*FLRLLFGHVVH
Trigger: ATGAACCACGTGGCCAAACAACAGTCTGAGGAAGCATTCCCTCAGGAACAGCAGAAAGCACCCCCTGTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CAA 90 bp AGGGGGTGCTTTCTGCTGTTCCTGAGGGAATGCTTCCTCAGACTGTaGTTTGGCCACGTGGTTCATATAGTTGTTACTCTCAGATGCTGC +
Preference number: 6 (lower is better)
Translates to: RGCFLLFLRECFLRL*FGHVVHIVVTLRCC
Trigger: GCAGCATCTGAGAGTAACAACTATATGAACCACGTGGCCAAACAACAGTCTGAGGAAGCATTCCCTCAGGAACAGCAGAAAGCACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CAA 90 bp GAGGCAAAACTTTGTGCCCAATTCATTCAACTTTTGAAGCGTTGGTaGTGCGACGCATTGTCAGGCATTGTTGTGCCGAAGGACTGGGCC +
Preference number: 6 (lower is better)
Translates to: EAKLCAQFIQLLKRW*CDALSGIVVPKDWA
Trigger: GGCCCAGTCCTTCGGCACAACAATGCCTGACAATGCGTCGCACAACCAACGCTTCAAAAGTTGAATGAATTGGGCACAAAGTTTTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS TCA 72 bp GAGGTCAGTGACCAGGTCCCTGGTAACTGTGCTCCATaGAGTTCTGGGCCCAATGCCATAGTATATATCTCT +
Preference number: 6 (lower is better)
Translates to: EVSDQVPGNCAP*SSGPNAIVYIS
Trigger: AGAGATATATACTATGGCATTGGGCCCAGAACTTCATGGAGCACAGTTACCAGGGACCTGGTCACTGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS TCA 72 bp CTGTGTACAGCAGAGGCTGAAGTGCAGTTTTGGTTGTaGGCTCTAGTTGTGCTTTGCCCTGCTGCCTTTAAG +
Preference number: 6 (lower is better)
Translates to: LCTAEAEVQFWL*ALVVLCPAAFK
Trigger: CTTAAAGGCAGCAGGGCAAAGCACAACTAGAGCTCACAACCAAAACTGCACTTCAGCCTCTGCTGTACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CCA 72 bp GTTGTAAGAGGATCAGCTTCGATGATTGCTCTCAATTaGTCGTTGCCAACTTTTGATGGCCGGGCACAACAC +
Preference number: 6 (lower is better)
Translates to: VVRGSASMIALN*SLPTFDGRAQH
Trigger: GTGTTGTGCCCGGCCATCAAAAGTTGGCAACGACCAATTGAGAGCAATCATCGAAGCTGATCCTCTTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CAA 72 bp TATTTGAGCCCTAACACCTTACTTCCCACATTGCTATaGAAGCCCCCAACAACAGGGGGTGCTTTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: YLSPNTLLPTLL*KPPTTGGAFCC
Trigger: ACAGCAGAAAGCACCCCCTGTTGTTGGGGGCTTCAATAGCAATGTGGGAAGTAAGGTGTTAGGGCTCAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CAA 72 bp TGGGCCATGGCAGAATACCATCCTGGCTCTAAAGACTaGAACCCTTCCCCTAACTTACGGGTCACCATAATT +
Preference number: 6 (lower is better)
Translates to: WAMAEYHPGSKD*NPSPNLRVTII
Trigger: AATTATGGTGACCCGTAAGTTAGGGGAAGGGTTCAAGTCTTTAGAGCCAGGATGGTATTCTGCCATGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CAA 90 bp TCCACTCTGAAGCCACTACTCGAACGCCGTGGAAACTGGATTGCTTaGTCACTGGAACACTTATTCCACAAAAGTACTGTGACCAAAGTG +
Preference number: 6 (lower is better)
Translates to: STLKPLLERRGNWIA*SLEHLFHKSTVTKV
Trigger: CACTTTGGTCACAGTACTTTTGTGGAATAAGTGTTCCAGTGACAAAGCAATCCAGTTTCCACGGCGTTCGAGTAGTGGCTTCAGAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CAA 90 bp CAGTCAATTTCTTCATATTTGAGCCCTAACACCTTACTTCCCACATaGCTATTGAAGCCCCCAACAACAGGGGGTGCTTTCTGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: QSISSYLSPNTLLPT*LLKPPTTGGAFCCS
Trigger: GGAACAGCAGAAAGCACCCCCTGTTGTTGGGGGCTTCAATAGCAATGTGGGAAGTAAGGTGTTAGGGCTCAAATATGAAGAAATTGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CAA 90 bp TGGATCAGACCGGCAGCAGACCATCAAACAGTGACCATTAACATTTaGGTAGAAGTTTGGCTTTGGGAAGTGCTCTGGAGCTTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: WIRPAADHQTVTINI*VEVWLWEVLWSFFS
Trigger: TGAGAAGAAGCTCCAGAGCACTTCCCAAAGCCAAACTTCTACCAAAATGTTAATGGTCACTGTTTGATGGTCTGCTGCCGGTCTGATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS TCA 72 bp GGGCATTATTTTGGTTGGCTTGACAGCTTTTGTGTTTaGAAGACCCACTCCTTTCCTGAGGTCAGTGACCAG +
Preference number: 6 (lower is better)
Translates to: GHYFGWLDSFCV*KTHSFPEVSDQ
Trigger: CTGGTCACTGACCTCAGGAAAGGAGTGGGTCTTTCAAACACAAAAGCTGTCAAGCCAACCAAAATAATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CCA 72 bp TCCACTCTGAAGCCACTACTCGAACGCCGTGGAAACTaGATTGCTTTGTCACTGGAACACTTATTCCACAAA +
Preference number: 6 (lower is better)
Translates to: STLKPLLERRGN*IALSLEHLFHK
Trigger: TTTGTGGAATAAGTGTTCCAGTGACAAAGCAATCCAGTTTCCACGGCGTTCGAGTAGTGGCTTCAGAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CCA 72 bp AAACCCATCCACTCTGAAGCCACTACTCGAACGCCGTaGAAACTGGATTGCTTTGTCACTGGAACACTTATT +
Preference number: 6 (lower is better)
Translates to: KPIHSEATTRTP*KLDCFVTGTLI
Trigger: AATAAGTGTTCCAGTGACAAAGCAATCCAGTTTCCACGGCGTTCGAGTAGTGGCTTCAGAGTGGATGGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CCA 72 bp GCTGTTCCTGAGGGAATGCTTCCTCAGACTGTTGTTTaGCCACGTGGTTCATATAGTTGTTACTCTCAGATG +
Preference number: 6 (lower is better)
Translates to: AVPEGMLPQTVV*PRGSYSCYSQM
Trigger: CATCTGAGAGTAACAACTATATGAACCACGTGGCCAAACAACAGTCTGAGGAAGCATTCCCTCAGGAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CCA 72 bp CATCGGGGTGATAGGGGGCTCTCTGTGCATAGACTTTaGAATAGCTATGAGAGAATTCAAACCGATCATAGC +
Preference number: 6 (lower is better)
Translates to: HRGDRGLSVHRL*NSYERIQTDHS
Trigger: GCTATGATCGGTTTGAATTCTCTCATAGCTATTCCAAAGTCTATGCACAGAGAGCCCCCTATCACCCCGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS CCA 72 bp AACATTTTGGTAGAAGTTTGGCTTTGGGAAGTGCTCTaGAGCTTCTTCTCAGTCCAACCACCAAGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: NILVEVWLWEVL*SFFSVQPPSWS
Trigger: TGACCAGCTTGGTGGTTGGACTGAGAAGAAGCTCCAGAGCACTTCCCAAAGCCAAACTTCTACCAAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CAA 72 bp CTTTGTGCCCAATTCATTCAACTTTTGAAGCGTTGGTaGTGCGACGCATTGTCAGGCATTGTTGTGCCGAAG +
Preference number: 6 (lower is better)
Translates to: LCAQFIQLLKRW*CDALSGIVVPK
Trigger: CTTCGGCACAACAATGCCTGACAATGCGTCGCACAACCAACGCTTCAAAAGTTGAATGAATTGGGCACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CAA 90 bp TGCTGGCTGCAGGCGTTGCAGCTTTCCATGCATCTCAGAGATTTGTaGAGCATACTTCTCAGATGTAATGGTTTTGCTGGAACTCAGAAA +
Preference number: 6 (lower is better)
Translates to: CWLQALQLSMHLRDL*SILLRCNGFAGTQK
Trigger: TTTCTGAGTTCCAGCAAAACCATTACATCTGAGAAGTATGCTCAACAAATCTCTGAGATGCATGGAAAGCTGCAACGCCTGCAGCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS TCA 72 bp CTTGAAGAAGTGGTAGTCAGTTGGCAAGAAGTCAGGTaGATACGGTGGATGAGGCAAAACTTTGTGCCCAAT +
Preference number: 6 (lower is better)
Translates to: LEEVVVSWQEVR*IRWMRQNFVPN
Trigger: ATTGGGCACAAAGTTTTGCCTCATCCACCGTATTCACCTGACTTCTTGCCAACTGACTACCACTTCTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CCA 72 bp AGACTTATCAGCCACATTCGCCATAAAGCAGCCCTTTaGCACAGTCCAGTCATTAGGCTTGTTTTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: RLISHIRHKAAL*HSPVIRLVFVS
Trigger: AGAGACAAAAACAAGCCTAATGACTGGACTGTGCCAAAGGGCTGCTTTATGGCGAATGTGGCTGATAAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CAA 72 bp TTTCTGCTGTTCCTGAGGGAATGCTTCCTCAGACTGTaGTTTGGCCACGTGGTTCATATAGTTGTTACTCTC +
Preference number: 6 (lower is better)
Translates to: FLLFLRECFLRL*FGHVVHIVVTL
Trigger: GAGAGTAACAACTATATGAACCACGTGGCCAAACAACAGTCTGAGGAAGCATTCCCTCAGGAACAGCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261858.7
ENST00000559420.2
CDS GCA 72 bp CTCTCGTCTCCTTTGCAAAAGTTCTTGAACCACCACTaGACTGTACCTTTGTTAGCAATTTCTGGGCCAAAT +
Preference number: 6 (lower is better)
Translates to: LSSPLQKFLNHH*TVPLLAISGPN
Trigger: ATTTGGCCCAGAAATTGCTAACAAAGGTACAGTGCAGTGGTGGTTCAAGAACTTTTGCAAAGGAGACGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CCA 72 bp ACAGTGACCATTAACATTTTGGTAGAAGTTTGGCTTTaGGAAGTGCTCTGGAGCTTCTTCTCAGTCCAACCA +
Preference number: 6 (lower is better)
Translates to: TVTINILVEVWL*EVLWSFFSVQP
Trigger: TGGTTGGACTGAGAAGAAGCTCCAGAGCACTTCCCAAAGCCAAACTTCTACCAAAATGTTAATGGTCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CAA 72 bp CAGCCCTTTGGCACAGTCCAGTCATTAGGCTTGTTTTaGTCTCTGTCTTCTGCTGTTTCATATACCTCTATG +
Preference number: 6 (lower is better)
Translates to: QPFGTVQSLGLF*SLSSAVSYTSM
Trigger: CATAGAGGTATATGAAACAGCAGAAGACAGAGACAAAAACAAGCCTAATGACTGGACTGTGCCAAAGGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CAA 72 bp GATGAGGCAAAACTTTGTGCCCAATTCATTCAACTTTaGAAGCGTTGGTTGTGCGACGCATTGTCAGGCATT +
Preference number: 6 (lower is better)
Translates to: DEAKLCAQFIQL*KRWLCDALSGI
Trigger: AATGCCTGACAATGCGTCGCACAACCAACGCTTCAAAAGTTGAATGAATTGGGCACAAAGTTTTGCCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CAA 90 bp TTTGCAATCAACCTAACCACCTTCTTGGGCATTATTTTGGTTGGCTaGACAGCTTTTGTGTTTGAAAGACCCACTCCTTTCCTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: FAINLTTFLGIILVG*TAFVFERPTPFLRS
Trigger: TGACCTCAGGAAAGGAGTGGGTCTTTCAAACACAAAAGCTGTCAAGCCAACCAAAATAATGCCCAAGAAGGTGGTTAGGTTGATTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CAA 90 bp CCCTTACCTTTTGCAATCAACCTAACCACCTTCTTGGGCATTATTTaGGTTGGCTTGACAGCTTTTGTGTTTGAAAGACCCACTCCTTTC +
Preference number: 6 (lower is better)
Translates to: PLPFAINLTTFLGII*VGLTAFVFERPTPF
Trigger: GAAAGGAGTGGGTCTTTCAAACACAAAAGCTGTCAAGCCAACCAAAATAATGCCCAAGAAGGTGGTTAGGTTGATTGCAAAAGGTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CCA 72 bp CATCAAACAGTGACCATTAACATTTTGGTAGAAGTTTaGCTTTGGGAAGTGCTCTGGAGCTTCTTCTCAGTC +
Preference number: 6 (lower is better)
Translates to: HQTVTINILVEV*LWEVLWSFFSV
Trigger: GACTGAGAAGAAGCTCCAGAGCACTTCCCAAAGCCAAACTTCTACCAAAATGTTAATGGTCACTGTTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS TCA 72 bp TCGAGCTTTTACAACCTTCTAATTTGCTTCAAATGCTaGATGACCGTAGGATGGTTGATGTTGAGTTCTCGG +
Preference number: 6 (lower is better)
Translates to: SSFYNLLICFKC*MTVGWLMLSSR
Trigger: CCGAGAACTCAACATCAACCATCCTACGGTCATTCAGCATTTGAAGCAAATTAGAAGGTTGTAAAAGCTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CAA 72 bp CCTTCACTGGTTTCTGGTGCAATAAACTGTTTGACATaGGTGAATCTAGACTTATCAGCCACATTCGCCATA +
Preference number: 6 (lower is better)
Translates to: PSLVSGAINCLT*VNLDLSATFAI
Trigger: TATGGCGAATGTGGCTGATAAGTCTAGATTCACCAATGTCAAACAGTTTATTGCACCAGAAACCAGTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CAA 72 bp TTTGCAATCAACCTAACCACCTTCTTGGGCATTATTTaGGTTGGCTTGACAGCTTTTGTGTTTGAAAGACCC +
Preference number: 6 (lower is better)
Translates to: FAINLTTFLGII*VGLTAFVFERP
Trigger: GGGTCTTTCAAACACAAAAGCTGTCAAGCCAACCAAAATAATGCCCAAGAAGGTGGTTAGGTTGATTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CAA 90 bp ATCTGGGATTCGATAAACTCTTGGAAAGCTTTTTCTGCATTCTGGTaGTGGAAACATCTTCCCTGCAAAAAGTTGCTGAGATGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: IWDSINSWKAFSAFW*WKHLPCKKLLRCLK
Trigger: CTTCAAGCATCTCAGCAACTTTTTGCAGGGAAGATGTTTCCACAACCAGAATGCAGAAAAAGCTTTCCAAGAGTTTATCGAATCCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS GCA 72 bp AGAGATGGTAATGTTGTCGAGGAATCCCTTACCTTTTaGAATCAACCTAACCACCTTCTTGGGCATTATTTT +
Preference number: 6 (lower is better)
Translates to: RDGNVVEESLTF*NQPNHLLGHYF
Trigger: AAAATAATGCCCAAGAAGGTGGTTAGGTTGATTGCAAAAGGTAAGGGATTCCTCGACAACATTACCATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CCA 72 bp ATAAACTCTTGGAAAGCTTTTTCTGCATTCTGGTTGTaGAAACATCTTCCCTGCAAAAAGTTGCTGAGATGC +
Preference number: 6 (lower is better)
Translates to: INSWKAFSAFWL*KHLPCKKLLRC
Trigger: GCATCTCAGCAACTTTTTGCAGGGAAGATGTTTCCACAACCAGAATGCAGAAAAAGCTTTCCAAGAGTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CCA 72 bp GATTCGATAAACTCTTGGAAAGCTTTTTCTGCATTCTaGTTGTGGAAACATCTTCCCTGCAAAAAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: DSINSWKAFSAF*LWKHLPCKKLL
Trigger: CAGCAACTTTTTGCAGGGAAGATGTTTCCACAACCAGAATGCAGAAAAAGCTTTCCAAGAGTTTATCGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS CAA 90 bp TATTCCTGTAGTGTAAAAATGTGTGATCTGGGATTCGATAAACTCTaGGAAAGCTTTTTCTGCATTCTGGTTGTGGAAACATCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: YSCSVKMCDLGFDKL*ESFFCILVVETSSL
Trigger: CAGGGAAGATGTTTCCACAACCAGAATGCAGAAAAAGCTTTCCAAGAGTTTATCGAATCCCAGATCACACATTTTTACACTACAGGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000559798.2
CDS GCA 72 bp ATACCTCTATGTGAGGAGGTTTCTCAGTTAGATTCTTaGTGTAATGACTTAATCCATACTGTGCAATCTGGA +
Preference number: 6 (lower is better)
Translates to: IPLCEEVSQLDS*CNDLIHTVQSG
Trigger: TCCAGATTGCACAGTATGGATTAAGTCATTACAGCAAGAATCTAACTGAGAAACCTCCTCACATAGAGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261858.7
ENST00000559420.2
ENST00000559500.1
CDS CCA 72 bp CCACTTACCAACGCACGTCACAATCTGATCAAGAAATaGTTCATTGTTGTTACACAAAGTAAGAGAAGACAA +
Preference number: 6 (lower is better)
Translates to: PLTNARHNLIKK*FIVVTQSKRRQ
Trigger: TTGTCTTCTCTTACTTTGTGTAACAACAATGAACCATTTCTTGATCAGATTGTGACGTGCGTTGGTAAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559798.2