Pregenerated sensors for GLCCI1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000233108Ensembl transcript IDs: ENST00000428660.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCGTGTGCAGAGGTAGCGAGCCCAACCCTCCCGTCCTCCCGGGCTaGGTCTCCCCGACGGTGCCCTCCGTGGAAACTTCAGCCTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: PVCRGSEPNPPVLPG*VSPTVPSVETSASS Trigger: CGAAGAGGCTGAAGTTTCCACGGAGGGCACCGTCGGGGAGACGCAGCCCGGGAGGACGGGAGGGTTGGGCTCGCTACCTCTGCACACGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428660.1 |
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| CDS TCA 90 bp | CGTATTCCTCATGATGCCAGAGCTCTTCAACCCTATATTCACTTCTaGCTATCTTGCTCTCCACTGATTGCACTGTTTTCTACTCCACCC | + |
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Preference number: 5 (lower is better) Translates to: RIPHDARALQPYIHF*LSCSPLIALFSTPP Trigger: GGGTGGAGTAGAAAACAGTGCAATCAGTGGAGAGCAAGATAGTCAGAAGTGAATATAGGGTTGAAGAGCTCTGGCATCATGAGGAATACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428660.1 |
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| CDS TCA 90 bp | ATTTATAATGAACAGAAACTTACTGGCTCACAATTCTGGAGGCTGTaGAGTCCAGTATCAAGGTGCCAGCAGTCGGTGAGGTTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: IYNEQKLTGSQFWRL*SPVSRCQQSVRFFL Trigger: CAAGAAGAACCTCACCGACTGCTGGCACCTTGATACTGGACTTCACAGCCTCCAGAATTGTGAGCCAGTAAGTTTCTGTTCATTATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428660.1 |
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| CDS TCA 90 bp | GAGCTCTTCAACCCTATATTCACTTCTGACTATCTTGCTCTCCACTaGTTGCACTGTTTTCTACTCCACCCTACCTGTATTAATTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: ELFNPIFTSDYLALH*LHCFLLHPTCINLF Trigger: AAACAAATTAATACAGGTAGGGTGGAGTAGAAAACAGTGCAATCAGTGGAGAGCAAGATAGTCAGAAGTGAATATAGGGTTGAAGAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428660.1 |
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| CDS GCA 90 bp | TCTTCAACCCTATATTCACTTCTGACTATCTTGCTCTCCACTGATTaGACTGTTTTCTACTCCACCCTACCTGTATTAATTTGTTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: SSTLYSLLTILLSTD*TVFYSTLPVLICFV Trigger: CACAAAACAAATTAATACAGGTAGGGTGGAGTAGAAAACAGTGCAATCAGTGGAGAGCAAGATAGTCAGAAGTGAATATAGGGTTGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428660.1 |
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| CDS GCA 72 bp | ACCCTCCCGTCCTCCCGGGCTGCGTCTCCCCGACGGTaGCCTCCGTGGAAACTTCAGCCTCTTCGGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TLPSSRAASPRR*PPWKLQPLRAS Trigger: AGAAGCCCGAAGAGGCTGAAGTTTCCACGGAGGGCACCGTCGGGGAGACGCAGCCCGGGAGGACGGGAGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428660.1 |
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| CDS GCA 72 bp | AGAGGTAGCGAGCCCAACCCTCCCGTCCTCCCGGGCTaGGTCTCCCCGACGGTGCCCTCCGTGGAAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: RGSEPNPPVLPG*VSPTVPSVETS Trigger: TGAAGTTTCCACGGAGGGCACCGTCGGGGAGACGCAGCCCGGGAGGACGGGAGGGTTGGGCTCGCTACCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428660.1 |
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| CDS CAA 72 bp | CAGAGCTCTTCAACCCTATATTCACTTCTGACTATCTaGCTCTCCACTGATTGCACTGTTTTCTACTCCACC | + |
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Preference number: 6 (lower is better) Translates to: QSSSTLYSLLTI*LSTDCTVFYST Trigger: GGTGGAGTAGAAAACAGTGCAATCAGTGGAGAGCAAGATAGTCAGAAGTGAATATAGGGTTGAAGAGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428660.1 |
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| CDS TCA 72 bp | CATGATGCCAGAGCTCTTCAACCCTATATTCACTTCTaGCTATCTTGCTCTCCACTGATTGCACTGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: HDARALQPYIHF*LSCSPLIALFS Trigger: AGAAAACAGTGCAATCAGTGGAGAGCAAGATAGTCAGAAGTGAATATAGGGTTGAAGAGCTCTGGCATCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428660.1 |
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