RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLCCI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106415

Ensembl transcript IDs: ENST00000223145.10, ENST00000414914.5, ENST00000430798.1, ENST00000438949.1, ENST00000460897.1, ENST00000470583.5, ENST00000474269.5, ENST00000482540.1, ENST00000489405.5, ENST00000491947.1, ENST00000492797.5, ENST00000496617.2

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCTCCTGCTACCTCCTTACTGTCTTCACAGGACTTGCTGCACTaGCCACAGATTTGGAGGAGCAATCAGGAGAAAGGGTTAGGGATT +
Preference number: 1 (lower is better)
Translates to: PPPATSLLSSQDLLH*PQIWRSNQEKGLGI
Trigger: AATCCCTAACCCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
3UTR GCA 90 bp ATTTTTAGCCTCCTCCTGCTACCTCCTTACTGTCTTCACAGGACTTaGTGCACTGGCCACAGATTTGGAGGAGCAATCAGGAGAAAGGGT +
Preference number: 1 (lower is better)
Translates to: IFSLLLLPPYCLHRT*CTGHRFGGAIRRKG
Trigger: ACCCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
3UTR TCA 90 bp TGGCCACAGATTTGGAGGAGCAATCAGGAGAAAGGGTTAGGGATTTaGAAAGGAATAGCTTCTTCATACAAAGCTCCCGGGGCTTGCTGC +
Preference number: 1 (lower is better)
Translates to: WPQIWRSNQEKGLGI*KGIASSYKAPGACC
Trigger: GCAGCAAGCCCCGGGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAACCCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438949.1
3UTR TCA 90 bp TTGGTGGTGGTGGTGTTCAGAAAGTTTGTCACTCATGCAGATGTCTaGAATCTTGTTCCGAATCCATGGAACATAGGGTGGAGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: LVVVVFRKFVTHADV*NLVPNPWNIGWRPA
Trigger: AGCTGGCCTCCACCCTATGTTCCATGGATTCGGAACAAGATTTCAGACATCTGCATGAGTGACAAACTTTCTGAACACCACCACCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR GCA 90 bp ATAAGTATTATTGGTGGTGGTGGTGTTCAGAAAGTTTGTCACTCATaGAGATGTCTGAAATCTTGTTCCGAATCCATGGAACATAGGGTG +
Preference number: 1 (lower is better)
Translates to: ISIIGGGGVQKVCHS*RCLKSCSESMEHRV
Trigger: CACCCTATGTTCCATGGATTCGGAACAAGATTTCAGACATCTGCATGAGTGACAAACTTTCTGAACACCACCACCACCAATAATACTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR TCA 90 bp CATGTTGAAACAGTGAATGCAACAGTTGTTTTACTTGTAACCACATaGCAAAGTGATGTCAAACACCACAGATTTTGCTGGTTCTCCTCA +
Preference number: 1 (lower is better)
Translates to: HVETVNATVVLLVTT*QSDVKHHRFCWFSS
Trigger: TGAGGAGAACCAGCAAAATCTGTGGTGTTTGACATCACTTTGTCATGTGGTTACAAGTAAAACAACTGTTGCATTCACTGTTTCAACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR GCA 90 bp ACAGTCTCCTACAATATAACACTGACTAATTTAAAGGAGCCAGAATaGACCTTCAGGAGAAAATATTACGACAAACTTTGGTGGAAAGAA +
Preference number: 1 (lower is better)
Translates to: TVSYNITLTNLKEPE*TFRRKYYDKLWWKE
Trigger: TTCTTTCCACCAAAGTTTGTCGTAATATTTTCTCCTGAAGGTGCATTCTGGCTCCTTTAAATTAGTCAGTGTTATATTGTAGGAGACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR TCA 90 bp TTCAGGAGAAAATATTACGACAAACTTTGGTGGAAAGAAGAGAATTaGGATCATGACAAAATAATGCACAGAATACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: FRRKYYDKLWWKEEN*DHDKIMHRIHTHTH
Trigger: GTGTGTGTGTGTGTGTATTCTGTGCATTATTTTGTCATGATCTCAATTCTCTTCTTTCCACCAAAGTTTGTCGTAATATTTTCTCCTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR CAA 90 bp CTGGCCACAGATTTGGAGGAGCAATCAGGAGAAAGGGTTAGGGATTaGAAAAGGAATAGCTTCTTCATACAAAGCTCCCGGGGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: LATDLEEQSGERVRD*KRNSFFIQSSRGLL
Trigger: CAGCAAGCCCCGGGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAACCCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438949.1
3UTR-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAACTTGTTCCGAATCCATaGAACATAGGGTGGAGGCCA +
Preference number: 2 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQLVPNP*NIGWRP
Trigger: TGGCCTCCACCCTATGTTCCATGGATTCGGAACAAG...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR CAA 90 bp TATGATGCTGATAAGTATTATTGGTGGTGGTGGTGTTCAGAAAGTTaGTCACTCATGCAGATGTCTGAAATCTTGTTCCGAATCCATGGA +
Preference number: 2 (lower is better)
Translates to: YDADKYYWWWWCSES*SLMQMSEILFRIHG
Trigger: TCCATGGATTCGGAACAAGATTTCAGACATCTGCATGAGTGACAAACTTTCTGAACACCACCACCACCAATAATACTTATCAGCATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTTCCACAAAAACTGCTaGATAGGAGTTCCGTCCCTG +
Preference number: 2 (lower is better)
Translates to: INSETQVFYVNEDHAPKLFHKNC*IGVPSL
Trigger: CAGGGACGGAACTCCTATTCAGCAGTTTTTGTGGAA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGATAGGGTGGGCACTGTaGAACTGTTGTGGCCATTTT +
Preference number: 2 (lower is better)
Translates to: INSETQVFYVNEDHAPKLIGWAL*NCCGHF
Trigger: AAAATGGCCACAACAGTTGCACAGTGCCCACCCTAT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCACCACAGATTTTGCTaGTTCTCCTCATGTTCACCC +
Preference number: 2 (lower is better)
Translates to: INSETQVFYVNEDHAPKLHHRFC*FSSCSP
Trigger: GGGTGAACATGAGGAGAACCAGCAAAATCTGTGGTG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAACTCATGCAGATGTCTaGAATCTTGTTCCGAATCCA +
Preference number: 2 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQTHADV*NLVPNP
Trigger: TGGATTCGGAACAAGATTTCAGACATCTGCATGAGT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR CAA 90 bp TTCTCCTCATGTTCACCCATGTCCAGGATTATCATTCTCCTAGGATaGAATGCACTTCTTATTCTAAGAATGTGGAATGTAATGAGGAAA +
Preference number: 2 (lower is better)
Translates to: FSSCSPMSRIIILLG*NALLILRMWNVMRK
Trigger: TTTCCTCATTACATTCCACATTCTTAGAATAAGAAGTGCATTCAATCCTAGGAGAATGATAATCCTGGACATGGGTGAACATGAGGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCTCCACTTAAAATGCTaGATGACACACACGTTTTGC +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFILHLKC*MTHTFC
Trigger: GCAAAACGTGTGTGTCATTCAGCATTTTAAGTGGAG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGGAAAGGCAAAAGAGTaGTGTTCCCTCTTTAGCTTT +
Preference number: 2 (lower is better)
Translates to: INSETQVFYVNEDHAPKLGKAKE*CSLFSF
Trigger: AAAGCTAAAGAGGGAACATCACTCTTTTGCCTTTCC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAACACATGTACACATGTTaGAACAGTGAATGCAACAGT +
Preference number: 2 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQHMYTC*NSECNS
Trigger: ACTGTTGCATTCACTGTTTCAACATGTGTACATGTG...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGTCACAGTCCTTTACTaGGCAACACCTGAACTTTTA +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFIVTVLY*ATPELL
Trigger: TAAAAGTTCAGGTGTTGCTCAGTAAAGGACTGTGAC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAATGACACACACGTTTTaGAAGCATTACTGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQMTHTF*KHYCFP
Trigger: TGGAAAGCAGTAATGCTTGCAAAACGTGTGTGTCAT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGCTGATAAGTATTATTaGTGGTGGTGGTGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQADKYY*WWWCSE
Trigger: TTCTGAACACCACCACCACCAATAATACTTATCAGC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGAACCACATGACAAAGTaGTGTCAAACACCACAGATT +
Preference number: 2 (lower is better)
Translates to: INSETQVFYVNEDHAPKLNHMTK*CQTPQI
Trigger: AATCTGTGGTGTTTGACATCACTTTGTCATGTGGTT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAAACACCACAGATTTTaGTGGTTCTCCTCATGTTCA +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFIKHHRF*WFSSCS
Trigger: TGAACATGAGGAGAACCAGCAAAATCTGTGGTGTTT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAATCATGCACCTAAACTaGTTGAGGAAGACAATAACA +
Preference number: 2 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQIMHLN*LRKTIT
Trigger: TGTTATTGTCTTCCTCAAGCAGTTTAGGTGCATGAT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAATCATCACACACAATGTaGAATGTTTATGTACAGTCC +
Preference number: 2 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQSSHTM*NVYVQS
Trigger: GGACTGTACATAAACATTCCACATTGTGTGTGATGA...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCACATGTTGAAACAGTaGATGCAACAGTTGTTTTAC +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFIHMLKQ*MQQLFY
Trigger: GTAAAACAACTGTTGCATTCACTGTTTCAACATGTG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTGTACAGTCCAGTACTaGACACTTTATTTGCAACAT +
Preference number: 2 (lower is better)
Translates to: INSETQVFYVNEDHAPKLCTVQY*TLYLQH
Trigger: ATGTTGCAAATAAAGTGTTCAGTACTGGACTGTACA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTATGTTGCATCAATTCTaGGACCCAAGTATTCTATGT +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFIMLHQF*DPSILC
Trigger: ACATAGAATACTTGGGTCTCAGAATTGATGCAACAT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAAAACCTGCTTATGTTaGATCAATTCTGAGACCCAA +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFIKTCLC*INSETQ
Trigger: TTGGGTCTCAGAATTGATGCAACATAAGCAGGTTTT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCTTGTGTCAAAAGTCTaGAAGTTCAAGGCTATTTTC +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFILVSKV*KFKAIF
Trigger: GAAAATAGCCTTGAACTTGCAGACTTTTGACACAAG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGATAAGTATTATTGGTaGTGGTGGTGTTCAGAAAGT +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFIDKYYW*WWCSES
Trigger: ACTTTCTGAACACCACCACCACCAATAATACTTATC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAAAGTTTGTCACTCATaGAGATGTCTGAAATCTTGT +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFIKVCHS*RCLKSC
Trigger: ACAAGATTTCAGACATCTGCATGAGTGACAAACTTT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGACTGAACACTTTATTTaGAACATTGTCACAGTCCTT +
Preference number: 2 (lower is better)
Translates to: INSETQVFYVNEDHAPKLTEHFI*NIVTVL
Trigger: AAGGACTGTGACAATGTTGCAAATAAAGTGTTCAGT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCTTATTCTAAGAATGTaGAATGTAATGAGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: KKIVPYTLGADETTLGFILILRM*NVMRKG
Trigger: CCCTTTCCTCATTACATTCCACATTCTTAGAATAAG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR GCA 72 bp CTCCTGCTACCTCCTTACTGTCTTCACAGGACTTGCTaGACTGGCCACAGATTTGGAGGAGCAATCAGGAGA +
Preference number: 3 (lower is better)
Translates to: LLLPPYCLHRTC*TGHRFGGAIRR
Trigger: TCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
3UTR GCA 72 bp TTCTATTCCTTGATGTCACCATTTTTAGCCTCCTCCTaGTACCTCCTTACTGTCTTCACAGGACTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: FYSLMSPFLASS*YLLTVFTGLAA
Trigger: TGCAGCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAATGGTGACATCAAGGAATAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
3UTR TCA 72 bp GTGGTGTTCAGAAAGTTTGTCACTCATGCAGATGTCTaGAATCTTGTTCCGAATCCATGGAACATAGGGTGG +
Preference number: 3 (lower is better)
Translates to: VVFRKFVTHADV*NLVPNPWNIGW
Trigger: CCACCCTATGTTCCATGGATTCGGAACAAGATTTCAGACATCTGCATGAGTGACAAACTTTCTGAACACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAATGGTGTTCAGAAAGTTaGTCACTCATGCAGATGTCT +
Preference number: 3 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQWCSES*SLMQMS
Trigger: AGACATCTGCATGAGTGACAAACTTTCTGAACACCA...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAAATGACACACACGTTTaGCAAGCATTACTGCTTTCC +
Preference number: 3 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQNDTHV*QALLLS
Trigger: GGAAAGCAGTAATGCTTGCAAAACGTGTGTGTCATT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CAA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCAAACACCACAGATTTaGCTGGTTCTCCTCATGTTC +
Preference number: 3 (lower is better)
Translates to: INSETQVFYVNEDHAPKLQTPQI*LVLLMF
Trigger: GAACATGAGGAGAACCAGCAAAATCTGTGGTGTTTG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CAA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGGCTCTCTTCACACTTaGTGGAGAACTTGTGTCAAA +
Preference number: 3 (lower is better)
Translates to: KKIVPYTLGADETTLGFIGSLHT*WRTCVK
Trigger: TTTGACACAAGTTCTCCACAAAGTGTGAAGAGAGCC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR GCA 72 bp CTCTTCACACTTTGTGGAGAACTTGTGTCAAAAGTCTaGAAGTTCAAGGCTATTTTCTTGAGTTTATGCTCT +
Preference number: 3 (lower is better)
Translates to: LFTLCGELVSKV*KFKAIFLSLCS
Trigger: AGAGCATAAACTCAAGAAAATAGCCTTGAACTTGCAGACTTTTGACACAAGTTCTCCACAAAGTGTGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR-3UTR CAA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCAGATGTCTGAAATCTaGTTCCGAATCCATGGAACA +
Preference number: 3 (lower is better)
Translates to: INSETQVFYVNEDHAPKLQMSEI*FRIHGT
Trigger: TGTTCCATGGATTCGGAACAAGATTTCAGACATCTG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR TCA 72 bp TCTGACAAATTTCTACAGCTGGATGTAGGATACATTTaGGCTCAACAACTTCTGGGAAATTTACATGGCAAA +
Preference number: 3 (lower is better)
Translates to: SDKFLQLDVGYI*AQQLLGNLHGK
Trigger: TTTGCCATGTAAATTTCCCAGAAGTTGTTGAGCTCAAATGTATCCTACATCCAGCTGTAGAAATTTGTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR TCA 72 bp ATATACTATGAAATGCATAGTCTCCACTTAAAATGCTaGATGACACACACGTTTTGCAAGCATTACTGCTTT +
Preference number: 3 (lower is better)
Translates to: IYYEMHSLHLKC*MTHTFCKHYCF
Trigger: AAAGCAGTAATGCTTGCAAAACGTGTGTGTCATTCAGCATTTTAAGTGGAGACTATGCATTTCATAGTATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR CCA 72 bp ATACATTTGAGCTCAACAACTTCTGGGAAATTTACATaGCAAAGCGTAAGCTTTAACACATTTGGTTCAAAA +
Preference number: 3 (lower is better)
Translates to: IHLSSTTSGKFT*QSVSFNTFGSK
Trigger: TTTTGAACCAAATGTGTTAAAGCTTACGCTTTGCCATGTAAATTTCCCAGAAGTTGTTGAGCTCAAATGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp TTCACAGGACTTGCTGCACTGGCCACAGATTTGGAGGAGCAATCAGGAGAAAGGGACTGCTGCAGCTACTaGTGCGCTCCTGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: FTGLAALATDLEEQSGERDCCSY*CAPGQK
Trigger: CTTCTGTCCAGGAGCGCAGCAGTAGCTGCAGCAGTC...CCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp GTCACCATTTTTAGCCTCCTCCTGCTACCTCCTTACTGTCTTCACAGGACTTGCTGCTGCAGCTACTGCTaGGCTCCTGGACAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VTIFSLLLLPPYCLHRTCCCSYC*APGQKE
Trigger: CTCCTTCTGTCCAGGAGCGCAGCAGTAGCTGCAGCA...GCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAATGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp TTCACAGGACTTGCTGCACTGGCCACAGATTTGGAGGAGCAATCAGGAGAAAGGCACAGGGTGAATGACTaGTGCAGCTACTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: FTGLAALATDLEEQSGERHRVND*CSYCCA
Trigger: AGCGCAGCAGTAGCTGCAGCAGTCATTCACCCTGTG...CCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp GTCACCATTTTTAGCCTCCTCCTGCTACCTCCTTACTGTCTTCACAGGACTTGCGGGCTTGCTGCAGAGTaGTCACTGGGAAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VTIFSLLLLPPYCLHRTCGLAAE*SLGREA
Trigger: TGCTTCCCTTCCCAGTGACCACTCTGCAGCAAGCCC...GCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAATGGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp TTCACAGGACTTGCTGCACTGGCCACAGATTTGGAGGAGCAATCAGGAGAAAGGGAGTCTGAGTGTCAATaGTGCGAGTACTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: FTGLAALATDLEEQSGERESECQ*CEYYCS
Trigger: GGAGCAGTAGTACTCGCAGCATTGACACTCAGACTC...CCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp AACTATGCCATGTTAGGATTCTCCCACCGAGCCAAAGTTCACTCTACCAAGCCTAGGGTGAATGACTGCTaGAGCTACTGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: NYAMLGFSHRAKVHSTKPRVNDC*SYCCAP
Trigger: AGGAGCGCAGCAGTAGCTGCAGCAGTCATTCACCCT...AGGCTTGGTAGAGTGAACTTTGGCTCGGTGGGAGAATCCTAACATGGCATAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp TTCACAGGACTTGCTGCACTGGCCACAGATTTGGAGGAGCAATCAGGAGAAAGGCTTCACAGGACTTGCTaGACTGGCCACAGATTTGGA +
Preference number: 4 (lower is better)
Translates to: FTGLAALATDLEEQSGERLHRTC*TGHRFG
Trigger: TCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAAG...CCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCGACGGGCGGACGCGTaGGACTGTGCTGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLRRADA*DCAGCP
Trigger: GGGGCAGCCAGCACAGTCCCACGCGTCCGCCCGTCG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCCTCCGGTGGCTCTCTaGGGACCGTCTCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLPPVAL*GPSRAA
Trigger: GGCCGCCCGAGACGGTCCCCAGAGAGCCACCGGAGG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp AAACTATGCCATGTTAGGATTCTCCCACCGAGCCAAAGTTCACTCTACCAAGCCCAGGACTTGCTGCACTaGCCACAGATTTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KLCHVRILPPSQSSLYQAQDLLH*PQIWRS
Trigger: GCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTG...GGCTTGGTAGAGTGAACTTTGGCTCGGTGGGAGAATCCTAACATGGCATAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR TCA 90 bp GTCACCATTTTTAGCCTCCTCCTGCTACCTCCTTACTGTCTTCACAGGACTTGCGAGCAAATCTTCTGTTaGGCAAGGGCTACCATCCTG +
Preference number: 4 (lower is better)
Translates to: VTIFSLLLLPPYCLHRTCEQIFC*ARATIL
Trigger: CAGGATGGTAGCCCTTGCTCAACAGAAGATTTGCTC...GCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAATGGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGGAGAACCCGGCAGCTaGAAGGAGGGCCGGGACCCC +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIGEPGS*KEGRDP
Trigger: GGGGTCCCGGCCCTCCTTGCAGCTGCCGGGTTCTCC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCAGCCCTCGCAGGGCTaGACGCACGGGAGAACCCGG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIQPSQG*THGRTR
Trigger: CCGGGTTCTCCCGTGCGTGCAGCCCTGCGAGGGCTG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTGGACATGGTGGCTCTaGGGGCCCTGGACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLWTWWL*GPWTPP
Trigger: CGGCGGCGTCCAGGGCCCGCAGAGCCACCATGTCCA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp TCAGGAGAAAGGGTTAGGGATTTGAAAAGGAATAGCTTCTTCATACAAAGCTCCGCTCCCGGGGCTTGCTaGAGAGTGGTCACTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGERVRDLKRNSFFIQSSAPGAC*RVVTGK
Trigger: CTTCCCAGTGACCACTCTGCAGCAAGCCCCGGGAGC...GGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAACCCTTTCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGAGGGCCTCGAGGTGCTaGCGCTCCTCGGAGTCCGCG +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLRASRC*RSSESA
Trigger: CGCGGACTCCGAGGAGCGCCAGCACCTCGAGGCCCT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAACGCGTGGGACTGTGCTaGCTGCCCCGCAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQRVGLC*LPRKSW
Trigger: CCAGCTCTTGCGGGGCAGCCAGCACAGTCCCACGCG...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR CAA 72 bp ACTGTCTTCACAGGACTTGCTGCACTGGCCACAGATTaGGAGGAGCAATCAGGAGAAAGGGTTAGGGATTTG +
Preference number: 4 (lower is better)
Translates to: TVFTGLAALATD*EEQSGERVRDL
Trigger: CAAATCCCTAACCCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAAGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR TCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAACTCCAGGCATCGTGCTaGCAGGGCAACGGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQLQASC*QGNGPD
Trigger: ATCCGGGCCGTTGCCCTGTCAGCACGATGCCTGGAG...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGCTCCGTCTCTCAGGTaGGCTGCTCCTCCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQAPSLR*AAPPVA
Trigger: AGCCACCGGAGGAGCAGCTCACCTGAGAGACGGAGC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGGACGCGTGGGACTGTaGTGGCTGCCCCGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLGRVGL*WLPRKS
Trigger: GCTCTTGCGGGGCAGCCAGCACAGTCCCACGCGTCC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTTGCCTTGTCCGCTCTaGACACGGGCGAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLLPCPL*TRASRG
Trigger: GCCCCGGCTCGCCCGTGTGCAGAGCGGACAAGGCAA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAAGGCAGTGGACATGGTaGCTCTGCGGGCCCTGGACG +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQRQWTW*LCGPWT
Trigger: CGTCCAGGGCCCGCAGAGCCACCATGTCCACTGCCT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAAGGAGGCAGTGGACATaGTGGCTCTGCGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQRRQWT*WLCGPW
Trigger: CCAGGGCCCGCAGAGCCACCATGTCCACTGCCTCCT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGCTGGTAGGGCACCGTaGCGCGGATGGGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIAGRAP*RGWAAA
Trigger: TGCTGCAGCCCATCCGCGCCACGGTGCCCTACCAGC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GATGTCACCATTTTTAGCCTCCTCCTGCTACCTCCTTACTGTCTTCACAGGACTGTAATGAGCAGGAAGTaGAGCTCTTCGACCATCTGG +
Preference number: 4 (lower is better)
Translates to: DVTIFSLLLLPPYCLHRTVMSRK*SSSTIW
Trigger: CCAGATGGTCGAAGAGCTCCACTTCCTGCTCATTAC...AGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAATGGTGACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp GTTAGGGATTTGAAAAGGAATAGCTTCTTCATACAAAGCTCCCGGGGCTTGCTGCAAGGGCTACCATCCTaGGATTCCGGGGGACAAAAA +
Preference number: 4 (lower is better)
Translates to: VRDLKRNSFFIQSSRGLLQGLPS*DSGGQK
Trigger: TTTTTGTCCCCCGGAATCCCAGGATGGTAGCCCTTG...CAGCAAGCCCCGGGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGAAAGGGCCTCGAGGTaGTGGCGCTCCTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLERASR*WRSSES
Trigger: GGACTCCGAGGAGCGCCAGCACCTCGAGGCCCTTTC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GAAAGGGTTAGGGATTTGAAAAGGAATAGCTTCTTCATACAAAGCTCCCGGGGCTCTGAGTGTCAATGCTaGGAGTACTACTGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: ERVRDLKRNSFFIQSSRGSECQC*EYYCSG
Trigger: ACCGGAGCAGTAGTACTCGCAGCATTGACACTCAGA...GCCCCGGGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAACCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp AACTATGCCATGTTAGGATTCTCCCACCGAGCCAAAGTTCACTCTACCAAGCCTTGTCTTCACAGGACTTaGTGCACTGGCCACAGATTT +
Preference number: 4 (lower is better)
Translates to: NYAMLGFSHRAKVHSTKPCLHRT*CTGHRF
Trigger: AAATCTGTGGCCAGTGCAGCAAGTCCTGTGAAGACA...AGGCTTGGTAGAGTGAACTTTGGCTCGGTGGGAGAATCCTAACATGGCATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGAGCTGCTCCTCCGGTaGCTCTCTGGGGACCGTCTC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLELLLR*LSGDRL
Trigger: GAGACGGTCCCCAGAGAGCCACCGGAGGAGCAGCTC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GAAAGGGTTAGGGATTTGAAAAGGAATAGCTTCTTCATACAAAGCTCCCGGGGCAGCTCTTCGACCATCTaGTATGTCCAACGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: ERVRDLKRNSFFIQSSRGSSSTI*YVQRLG
Trigger: TCCAAGCCGTTGGACATACCAGATGGTCGAAGAGCT...GCCCCGGGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAACCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR TCA 90 bp TTCACAGGACTTGCTGCACTGGCCACAGATTTGGAGGAGCAATCAGGAGAAAGGAAGGGAGATAAAGCTTaGAACTATGCCATGTTAGGA +
Preference number: 4 (lower is better)
Translates to: FTGLAALATDLEEQSGERKGDKA*NYAMLG
Trigger: TCCTAACATGGCATAGTTTCAAGCTTTATCTCCCTT...CCTTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCGGCGCGATAGTGCGTaGGAGTGTGTAAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLRRDSA*ECVRGR
Trigger: CCTCCCCCTTACACACTCGCACGCACTATCGCGCCG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTGGGACTGTGCTGGCTaGCCCGCAAGAGCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIWDCAG*PARAGR
Trigger: CCTACCAGCTCTTGCGGGGCAGCCAGCACAGTCCCA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp TTGAAACTATGCCATGTTAGGATTCTCCCACCGAGCCAAAGTTCACTCTACCAATGCTGCGAGTACTACTaGTCCGGTAATGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LKLCHVRILPPSQSSLYQCCEYY*SGNEQE
Trigger: TTCCTGCTCATTACCGGAGCAGTAGTACTCGCAGCA...TTGGTAGAGTGAACTTTGGCTCGGTGGGAGAATCCTAACATGGCATAGTTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAGGAGGAGGAGGCAGTaGACATGGTGGCTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIRRRRQ*TWWLCG
Trigger: CCCGCAGAGCCACCATGTCCACTGCCTCCTCCTCCT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTCACCATTTTTAGCCTCCTCCTGCTACCTCCTTACTGTCTTCACAGGACTTGCAGCTGTTGTTTGGTTTaGGAGATGAAGCATACTTGG +
Preference number: 4 (lower is better)
Translates to: VTIFSLLLLPPYCLHRTCSCCLV*EMKHTW
Trigger: CCAAGTATGCTTCATCTCCCAAACCAAACAACAGCT...GCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAATGGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCTGCTGCTGCTGGGATaGCTGCTGGACAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFILLLLG*LLDRGL
Trigger: GAGGCCTCTGTCCAGCAGCCATCCCAGCAGCAGCAG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAAGGAGCTGCTGCTGCTaGGATGGCTGCTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQRSCCC*DGCWTE
Trigger: CTCTGTCCAGCAGCCATCCCAGCAGCAGCAGCTCCT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp TTGGAGGAGCAATCAGGAGAAAGGGTTAGGGATTTGAAAAGGAATAGCTTCTTCTGGACAGAAGGAGTCTaGGTGTCAATGCTGCGAGTA +
Preference number: 4 (lower is better)
Translates to: LEEQSGERVRDLKRNSFFWTEGV*VSMLRV
Trigger: TACTCGCAGCATTGACACTCAGACTCCTTCTGTCCA...GAAGAAGCTATTCCTTTTCAAATCCCTAACCCTTTCTCCTGATTGCTCCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGGGGCCGAGATAGGCTaGCGAGACGCCATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIGAEIG*RDAISS
Trigger: TGAGGAAATGGCGTCTCGTCAGCCTATCTCGGCCCC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGTCTCTCAGGTGAGCTaGTCCTCCGGTGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIVSQVS*SSGGSL
Trigger: CAGAGAGCCACCGGAGGAGCAGCTCACCTGAGAGAC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTGCTGCTGGGATGGCTaGTGGACAGAGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFICCWDG*WTEASM
Trigger: CATGGAGGCCTCTGTCCAGCAGCCATCCCAGCAGCA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTGCAGGAGCTGCTGCTaGTGGGATGGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFICRSCC*WDGCWT
Trigger: TGTCCAGCAGCCATCCCAGCAGCAGCAGCTCCTGCA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GTTAGGGATTTGAAAAGGAATAGCTTCTTCATACAAAGCTCCCGGGGCTTGCTGTTTTTAGCCTCCTCCTaGTACCTCCTTACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VRDLKRNSFFIQSSRGLLFLASS*YLLTVF
Trigger: GAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAA...CAGCAAGCCCCGGGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp TTGAAACTATGCCATGTTAGGATTCTCCCACCGAGCCAAAGTTCACTCTACCAAGAGATGAAGCATACTTaGGTAACGGTGAGCTACTCC +
Preference number: 4 (lower is better)
Translates to: LKLCHVRILPPSQSSLYQEMKHT*VTVSYS
Trigger: GGAGTAGCTCACCGTTACCCAAGTATGCTTCATCTC...TTGGTAGAGTGAACTTTGGCTCGGTGGGAGAATCCTAACATGGCATAGTTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTGCTGGGATGGCTGCTaGACAGAGGCCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFICWDGC*TEASME
Trigger: CTCCATGGAGGCCTCTGTCCAGCAGCCATCCCAGCA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp TTGAAACTATGCCATGTTAGGATTCTCCCACCGAGCCAAAGTTCACTCTACCAATTATTCCTTCTACATTaGAGGGCACACGCGAAACAG +
Preference number: 4 (lower is better)
Translates to: LKLCHVRILPPSQSSLYQLFLLH*RAHAKQ
Trigger: CTGTTTCGCGTGTGCCCTGCAATGTAGAAGGAATAA...TTGGTAGAGTGAACTTTGGCTCGGTGGGAGAATCCTAACATGGCATAGTTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTGCTGCAGCTACTGCTaGGCTCCTGGACAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLCCSYC*APGQKE
Trigger: CTCCTTCTGTCCAGGAGCGCAGCAGTAGCTGCAGCA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGACTGCTGCAGCTACTaGTGCGCTCCTGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLDCCSY*CAPGQK
Trigger: CTTCTGTCCAGGAGCGCAGCAGTAGCTGCAGCAGTC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAAGGGTGAATGACTGCTaGAGCTACTGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQRVNDC*SYCCAP
Trigger: AGGAGCGCAGCAGTAGCTGCAGCAGTCATTCACCCT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGACCCGGGATGAGAGCTaGTCAACGGTCAGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLTRDES*STVRVA
Trigger: GGCAACTCTGACCGTTGAGCAGCTCTCATCCCGGGT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTATGTGGTCCTCACCCTaGAGTTCCTGCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIMWSSP*SSCRSC
Trigger: GCAGCTCCTGCAGGAACTGCAGGGTGAGGACCACAT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAATGGAGCCCGCTGTGCTaGTGTCATCAGAAAGAGACG +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQWSPLC*CHQKET
Trigger: CGTCTCTTTCTGATGACACCAGCACAGCGGGCTCCA...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGAGGTCCGAACTTGCTaGGATTTTGCCTTGTCCGCT +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQEVRTC*DFALSA
Trigger: AGCGGACAAGGCAAAATCTCAGCAAGTTCGGACCTC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCGCAGAACGCTGATGTaGCCTCTTTTCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLRRTLM*PLFCTL
Trigger: GAGGGTGCAGAAAAGAGGTCACATCAGCGTTCTGCG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAAAGGAAACCCGGGATaGGAGCTGCTCAACGGTCAG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIKGNPG*ELLNGQ
Trigger: CTGACCGTTGAGCAGCTCTCATCCCGGGTTTCCTTT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAACTGCGTTGTAGTTGCTaGCTCAGTTTGGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQLRCSC*LSLAIC
Trigger: GCAGATCGCCAAACTGAGGCAGCAACTACAACGCAG...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCACAGGGTGAATGACTaGTGCAGCTACTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLHRVND*CSYCCA
Trigger: AGCGCAGCAGTAGCTGCAGCAGTCATTCACCCTGTG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCCATGGAGCCCGCTGTaGTGGTGTCATCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIPWSPL*WCHQKE
Trigger: CTCTTTCTGATGACACCAGCACAGCGGGCTCCATGG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp AGCCTTCTCTTAAGCCACCAGTTTCTATTCCTTGATGTCACCATTTTTAGCCTCGTATGTCCAACGGCTTaGATACTTCTTCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SLLLSHQFLFLDVTIFSLVCPTA*ILLPSH
Trigger: ATGGGAAGGAAGAAGTATCCAAGCCGTTGGACATAC...GAGGCTAAAAATGGTGACATCAAGGAATAGAAACTGGTGGCTTAAGAGAAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGCCAAAGCTGAGCTCTaGCCAGAGTTAGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIAKAEL*PELGEF
Trigger: GAACTCCCCTAACTCTGGCCAGAGCTCAGCTTTGGC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGTGGCCACTGTCCTGTaGGGTAAGGTCCTGTTATTG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIVATVL*GKVLLL
Trigger: CAATAACAGGACCTTACCTCACAGGACAGTGGCCAC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGTTAGGCTCTCCCATTaGCCAATCAGGAATGCCTGG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIVRLSH*PIRNAW
Trigger: CCAGGCATTCCTGATTGGTCAATGGGAGAGCCTAAC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAATCTGAGTGTCAATGCTaGGAGTACTACTGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQSECQC*EYYCSG
Trigger: ACCGGAGCAGTAGTACTCGCAGCATTGACACTCAGA...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGAGTCTGAGTGTCAATaGTGCGAGTACTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQESECQ*CEYYCS
Trigger: GGAGCAGTAGTACTCGCAGCATTGACACTCAGACTC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGAACATGAGGATCCCGTaGCCACTGTCCTGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLNMRIP*PLSCEV
Trigger: TACCTCACAGGACAGTGGCCACGGGATCCTCATGTT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAAGCTCTTCGACCATCTaGTATGTCCAACGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQSSSTI*YVQRLG
Trigger: TCCAAGCCGTTGGACATACCAGATGGTCGAAGAGCT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCAAGGGCTACCATCCTaGGATTCCGGGGGACAAAAA +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIQGLPS*DSGGQK
Trigger: TTTTTGTCCCCCGGAATCCCAGGATGGTAGCCCTTG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCATGACGCAGAACGCTaGTGTGACCTCTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIHDAER*CDLFSA
Trigger: TGCAGAAAAGAGGTCACATCAGCGTTCTGCGTCATG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTGGACAGAAGGAGTCTaGGTGTCAATGCTGCGAGTA +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIWTEGV*VSMLRV
Trigger: TACTCGCAGCATTGACACTCAGACTCCTTCTGTCCA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGAGCAAATCTTCTGTTaGGCAAGGGCTACCATCCTG +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLEQIFC*ARATIL
Trigger: CAGGATGGTAGCCCTTGCTCAACAGAAGATTTGCTC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAATTACTGCGTTGTAGTTaGTGCCTCAGTTTGGCGATC +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQLLRCS*CLSLAI
Trigger: GATCGCCAAACTGAGGCAGCAACTACAACGCAGTAA...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTGCTGCGAGTACTACTaGTCCGGTAATGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFICCEYY*SGNEQE
Trigger: TTCCTGCTCATTACCGGAGCAGTAGTACTCGCAGCA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTTGACCAATCAGGAATaGCTGGGGCTCTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFILTNQE*LGLSSH
Trigger: GTGTGAAGAGAGCCCCAGGCATTCCTGATTGGTCAA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGTAATGAGCAGGAAGTaGAGCTCTTCGACCATCTGG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIVMSRK*SSSTIW
Trigger: CCAGATGGTCGAAGAGCTCCACTTCCTGCTCATTAC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCTTGTTCCGAATCCATaGAACATAGGGTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLLVPNP*NIGWRP
Trigger: TGGCCTCCACCCTATGTTCCATGGATTCGGAACAAG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAACACCACAGATTTTGCTaGTTCTCCTCATGTTCACCC +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQHHRFC*FSSCSP
Trigger: GGGTGAACATGAGGAGAACCAGCAAAATCTGTGGTG...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGATCTGCTCTTTTAGTTaGTCAGCACTCCCCCATGAC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLICSFS*SALPHD
Trigger: GTCATGGGGGAGTGCTGATCAACTAAAAGAGCAGAT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGTTTTTGTCAGGACATaGAAAGAGAGGGGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIVFVRT*KERGRD
Trigger: ATCTCGGCCCCTCTCTTTTCATGTCCTGACAAAAAC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTTCCACAAAAACTGCTaGATAGGAGTTCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIFHKNC*IGVPSL
Trigger: CAGGGACGGAACTCCTATTCAGCAGTTTTTGTGGAA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAACTTGCTGAGATTTTaGCTTGTCCGCTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFINLLRF*LVRSAH
Trigger: GTGTGCAGAGCGGACAAGGCAAAATCTCAGCAAGTT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGACTACTCTGTTTACTaGGTTGTAGTTGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQDYSVY*VVVAAS
Trigger: TGAGGCAGCAACTACAACGCAGTAAACAGAGTAGTC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGAGATGAAGCATACTTaGGTAACGGTGAGCTACTCC +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIEMKHT*VTVSYS
Trigger: GGAGTAGCTCACCGTTACCCAAGTATGCTTCATCTC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAATTTGTCTTTCATGCATaGAGGGTAGTGAACATGAGG +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQFVFHA*RVVNMR
Trigger: CCTCATGTTCACTACCCTTCATGCATGAAAGACAAA...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTACAGGACAGAAAGCTaGTCCGGTTGGGATGAAATT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLYRTES*SGWDEI
Trigger: AATTTCATCCCAACCGGATCAGCTTTCTGTCCTGTA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGGAAAGGCAAAAGAGTaGTGTTCCCTCTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQGKAKE*CSLFSF
Trigger: AAAGCTAAAGAGGGAACATCACTCTTTTGCCTTTCC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAAAACCCAGGAATGAATaGAAGGAACTGAAACGTTCC +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQKPRNE*KELKRS
Trigger: GGAACGTTTCAGTTCCTTTCATTCATTCCTGGGTTT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTTATTCCTTCTACATTaGAGGGCACACGCGAAACAG +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLLFLLH*RAHAKQ
Trigger: CTGTTTCGCGTGTGCCCTGCAATGTAGAAGGAATAA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGTTGCTGCCTCAGTTTaGCGATCTGCTCTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLVAASV*RSALLV
Trigger: AACTAAAAGAGCAGATCGCCAAACTGAGGCAGCAAC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGTATGTCCAACGGCTTaGATACTTCTTCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLVCPTA*ILLPSH
Trigger: ATGGGAAGGAAGAAGTATCCAAGCCGTTGGACATAC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
3UTR CAA 72 bp CTTGTGTCAAAAGTCTGCAAGTTCAAGGCTATTTTCTaGAGTTTATGCTCTACCTCACAGGTTGCAAATTTC +
Preference number: 4 (lower is better)
Translates to: LVSKVCKFKAIF*SLCSTSQVANF
Trigger: GAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAACTTGCAGACTTTTGACACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTCTTTCTCCTTACTGTaGCGACTACTCTGTTTACTG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFISFSLL*RLLCLL
Trigger: CAGTAAACAGAGTAGTCGTCACAGTAAGGAGAAAGA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGACTCATGCAGATGTCTaGAATCTTGTTCCGAATCCA +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLTHADV*NLVPNP
Trigger: TGGATTCGGAACAAGATTTCAGACATCTGCATGAGT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGTCACAGTCCTTTACTaGGCAACACCTGAACTTTTA +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLVTVLY*ATPELL
Trigger: TAAAAGTTCAGGTGTTGCTCAGTAAAGGACTGTGAC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGATGTAGGATACATTTaGGCTCAACAACTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIDVGYI*AQQLLG
Trigger: TCCCAGAAGTTGTTGAGCTCAAATGTATCCTACATC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAAAACACCACAGATTTTaGTGGTTCTCCTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQKHHRF*WFSSCS
Trigger: TGAACATGAGGAGAACCAGCAAAATCTGTGGTGTTT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAGCTGTTGTTTGGTTTaGGAGATGAAGCATACTTGG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFISCCLV*EMKHTW
Trigger: CCAAGTATGCTTCATCTCCCAAACCAAACAACAGCT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGAGCTCAACAACTTCTaGGAAATTTACATGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQELNNF*EIYMAK
Trigger: CTTTGCCATGTAAATTTCCCAGAAGTTGTTGAGCTC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAACCACATGACAAAGTaGTGTCAAACACCACAGATT +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFINHMTK*CQTPQI
Trigger: AATCTGTGGTGTTTGACATCACTTTGTCATGTGGTT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCACATGTACACATGTTaGAACAGTGAATGCAACAGT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLHMYTC*NSECNS
Trigger: ACTGTTGCATTCACTGTTTCAACATGTGTACATGTG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTCAAGGCTATTTTCTTaGGTTTATGCTCTACCTCAC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLSRLFS*VYALPH
Trigger: GTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCACTTTAGGCGCAGATaGAACAACTCTAGGTTTTAT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLHFRRR*NNSRFY
Trigger: ATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAGAAAAACCCAGGAATaGATGAAAGGAACTGAAACG +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFIRKTQE*MKGTET
Trigger: CGTTTCAGTTCCTTTCATTCATTCCTGGGTTTTTCT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAATACTGTTCAGCGCAATaGCTAGAATTAAACAGTACA +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQYCSAQ*LELNST
Trigger: TGTACTGTTTAATTCTAGCCATTGCGCTGAACAGTA...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTTGTACAGTCCAGTACTaGACACTTTATTTGCAACAT +
Preference number: 4 (lower is better)
Translates to: KKIVPYTLGADETTLGFICTVQY*TLYLQH
Trigger: ATGTTGCAAATAAAGTGTTCAGTACTGGACTGTACA...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR TCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGATGTTGCATCAATTCTaGGACCCAAGTATTCTATGT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLMLHQF*DPSILC
Trigger: ACATAGAATACTTGGGTCTCAGAATTGATGCAACAT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAACTGAACACTTTATTTaGAACATTGTCACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQTEHFI*NIVTVL
Trigger: AAGGACTGTGACAATGTTGCAAATAAAGTGTTCAGT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGATTTTCTTGAGTTTATaGTCTACCTCACAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLIFLSL*STSQVA
Trigger: TGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAAT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGCTTGTGTCAAAAGTCTaGAAGTTCAAGGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLLVSKV*KFKAIF
Trigger: GAAAATAGCCTTGAACTTGCAGACTTTTGACACAAG...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGATAAGTATTATTGGTaGTGGTGGTGTTCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLDKYYW*WWCSES
Trigger: ACTTTCTGAACACCACCACCACCAATAATACTTATC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAACTTATTCTAAGAATGTaGAATGTAATGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQLILRM*NVMRKG
Trigger: CCCTTTCCTCATTACATTCCACATTCTTAGAATAAG...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTCATCACACACAATGTaGAATGTTTATGTACAGTCC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLSSHTM*NVYVQS
Trigger: GGACTGTACATAAACATTCCACATTGTGTGTGATGA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTCTCTTCACACTTTGTaGAGAACTTGTGTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLSLHTL*RTCVKS
Trigger: ACTTTTGACACAAGTTCTCCACAAAGTGTGAAGAGA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGTCTGGGAAATTTACATaGCAAAGCGTAAGCTTTAAC +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLSGKFT*QSVSFN
Trigger: GTTAAAGCTTACGCTTTGCCATGTAAATTTCCCAGA...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR GCA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGAAAGTTTGTCACTCATaGAGATGTCTGAAATCTTGT +
Preference number: 4 (lower is better)
Translates to: INSETQVFYVNEDHAPKLKVCHS*RCLKSC
Trigger: ACAAGATTTCAGACATCTGCATGAGTGACAAACTTT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 90 bp AGGAGGAGGAGGAGGAGGCAGTGGACATGGTGGCTCTGCGGGCCCTaGACGCCGCCGGCCGACACGGAGGCGCGGGGCGGGAGGCGCGCG +
Preference number: 5 (lower is better)
Translates to: RRRRRRQWTWWLCGP*TPPADTEARGGRRA
Trigger: CGCGCGCCTCCCGCCCCGCGCCTCCGTGTCGGCCGGCGGCGTCCAGGGCCCGCAGAGCCACCATGTCCACTGCCTCCTCCTCCTCCTCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 90 bp GCGTGGGACTGTGCTGGCTGCCCCGCAAGAGCTGGTAGGGCACCGTaGCGCGGATGGGCTGCAGCAGCCGGCCGGCTCCCGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: AWDCAGCPARAGRAP*RGWAAAAGRLPQPG
Trigger: CCCCGGCTGCGGGAGCCGGCCGGCTGCTGCAGCCCATCCGCGCCACGGTGCCCTACCAGCTCTTGCGGGGCAGCCAGCACAGTCCCACGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 90 bp ACGGGCGAGCCGGGGCTCCGTCTCTCAGGTGAGCTGCTCCTCCGGTaGCTCTCTGGGGACCGTCTCGGGCGGCCCTTGGCCCGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: TGEPGLRLSGELLLR*LSGDRLGRPLARGA
Trigger: GGCGCCGCGGGCCAAGGGCCGCCCGAGACGGTCCCCAGAGAGCCACCGGAGGAGCAGCTCACCTGAGAGACGGAGCCCCGGCTCGCCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000430798.1
ENST00000492797.5
CDS GCA 90 bp AGGCGGCGGCAGCGGCGACGGGCGGACGCGTGGGACTGTGCTGGCTaGCCCGCAAGAGCTGGTAGGGCACCGTGGCGCGGATGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: RRRQRRRADAWDCAG*PARAGRAPWRGWAA
Trigger: TGCAGCCCATCCGCGCCACGGTGCCCTACCAGCTCTTGCGGGGCAGCCAGCACAGTCCCACGCGTCCGCCCGTCGCCGCTGCCGCCGCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 90 bp GAAAACAAACGTCCAACGGCCGCAACCGCCCGGCTGGGCTCGGTGTaGCGGTCACGGCCGGGGCCGCAAGGAGCCCGGAGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: ENKRPTAATARLGSV*RSRPGPQGARSRRR
Trigger: GCGGCGGCGGCTCCGGGCTCCTTGCGGCCCCGGCCGTGACCGCCACACCGAGCCCAGCCGGGCGGTTGCGGCCGTTGGACGTTTGTTTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS GCA 90 bp AGCCCCGAGGGCCGCTCGCAGCCTTCTCCTCAGCCCTCGCAGGGCTaGACGCACGGGAGAACCCGGCAGCTGCAAGGAGGGCCGGGACCC +
Preference number: 5 (lower is better)
Translates to: SPEGRSQPSPQPSQG*THGRTRQLQGGPGP
Trigger: GGGTCCCGGCCCTCCTTGCAGCTGCCGGGTTCTCCCGTGCGTGCAGCCCTGCGAGGGCTGAGGAGAAGGCTGCGAGCGGCCCTCGGGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 90 bp GGGTCTGAGAGGAACTGGAGGAGGAGGAGGAGGAGGCAGTGGACATaGTGGCTCTGCGGGCCCTGGACGCCGCCGGCCGACACGGAGGCG +
Preference number: 5 (lower is better)
Translates to: GSERNWRRRRRRQWT*WLCGPWTPPADTEA
Trigger: CGCCTCCGTGTCGGCCGGCGGCGTCCAGGGCCCGCAGAGCCACCATGTCCACTGCCTCCTCCTCCTCCTCCTCCAGTTCCTCTCAGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 90 bp GATGAGGGGTCTGAGAGGAACTGGAGGAGGAGGAGGAGGAGGCAGTaGACATGGTGGCTCTGCGGGCCCTGGACGCCGCCGGCCGACACG +
Preference number: 5 (lower is better)
Translates to: DEGSERNWRRRRRRQ*TWWLCGPWTPPADT
Trigger: CGTGTCGGCCGGCGGCGTCCAGGGCCCGCAGAGCCACCATGTCCACTGCCTCCTCCTCCTCCTCCTCCAGTTCCTCTCAGACCCCTCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 90 bp TGCGCCTCATCCTCTGCGACGGGGGATGAGGGGTCTGAGAGGAACTaGAGGAGGAGGAGGAGGAGGCAGTGGACATGGTGGCTCTGCGGG +
Preference number: 5 (lower is better)
Translates to: CASSSATGDEGSERN*RRRRRRQWTWWLCG
Trigger: CCCGCAGAGCCACCATGTCCACTGCCTCCTCCTCCTCCTCCTCCAGTTCCTCTCAGACCCCTCATCCCCCGTCGCAGAGGATGAGGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS GCA 90 bp TGCAGCTACTGCTGCGCTCCTGGACAGAAGGAGTCTGAGTGTCAATaGTGCGAGTACTACTGCTCCGGTAATGAGCAGGAAGTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: CSYCCAPGQKESECQ*CEYYCSGNEQEVEL
Trigger: GAGCTCCACTTCCTGCTCATTACCGGAGCAGTAGTACTCGCAGCATTGACACTCAGACTCCTTCTGTCCAGGAGCGCAGCAGTAGCTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000438949.1
ENST00000482540.1
ENST00000489405.5
ENST00000496617.2
CDS GCA 90 bp AGCTACTGCTGCGCTCCTGGACAGAAGGAGTCTGAGTGTCAATGCTaGGAGTACTACTGCTCCGGTAATGAGCAGGAAGTGGAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: SYCCAPGQKESECQC*EYYCSGNEQEVELF
Trigger: GAAGAGCTCCACTTCCTGCTCATTACCGGAGCAGTAGTACTCGCAGCATTGACACTCAGACTCCTTCTGTCCAGGAGCGCAGCAGTAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000438949.1
ENST00000482540.1
ENST00000489405.5
ENST00000496617.2
CDS GCA 90 bp GACAAAAAGGGGAGACACAGGGTGAATGACTGCTGCAGCTACTGCTaGGCTCCTGGACAGAAGGAGTCTGAGTGTCAATGCTGCGAGTAC +
Preference number: 5 (lower is better)
Translates to: DKKGRHRVNDCCSYC*APGQKESECQCCEY
Trigger: GTACTCGCAGCATTGACACTCAGACTCCTTCTGTCCAGGAGCGCAGCAGTAGCTGCAGCAGTCATTCACCCTGTGTCTCCCCTTTTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000438949.1
ENST00000482540.1
ENST00000489405.5
ENST00000496617.2
CDS CCA 90 bp CGGGATGAGAGCTGCTCAACGGTCAGAGTTGCCAAAGCTGAGCTCTaGCCAGAGTTAGGGGAGTTCTTGAGCATAAGGTCAGAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: RDESCSTVRVAKAEL*PELGEFLSIRSEAG
Trigger: ACCTGCTTCTGACCTTATGCTCAAGAACTCCCCTAACTCTGGCCAGAGCTCAGCTTTGGCAACTCTGACCGTTGAGCAGCTCTCATCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223145.10
ENST00000482540.1
ENST00000489405.5
CDS GCA 90 bp CTGGTGTCATCAGAAAGAGACGTAAAGGAAACCCGGGATGAGAGCTaGTCAACGGTCAGAGTTGCCAAAGCTGAGCTCTGGCCAGAGTTA +
Preference number: 5 (lower is better)
Translates to: LVSSERDVKETRDES*STVRVAKAELWPEL
Trigger: TAACTCTGGCCAGAGCTCAGCTTTGGCAACTCTGACCGTTGAGCAGCTCTCATCCCGGGTTTCCTTTACGTCTCTTTCTGATGACACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223145.10
ENST00000482540.1
ENST00000489405.5
CDS TCA 90 bp TTCTGCCCAACAGCTAGGTGTCTGAGTAGCTTTGTCTTTCATGCATaGAGGGTAGTGAACATGAGGATCCCGTGGCCACTGTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: FCPTARCLSSFVFHA*RVVNMRIPWPLSCE
Trigger: CTCACAGGACAGTGGCCACGGGATCCTCATGTTCACTACCCTTCATGCATGAAAGACAAAGCTACTCAGACACCTAGCTGTTGGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223145.10
ENST00000430798.1
ENST00000470583.5
ENST00000474269.5
ENST00000489405.5
ENST00000492797.5
CDS TCA 90 bp TTGCTGCCTCAGTTTGGCGATCTGAGTAGCTTTGTCTTTCATGCATaGAGGGTAGTGAACATGAGGATCCCGTGGCCACTGTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LLPQFGDLSSFVFHA*RVVNMRIPWPLSCE
Trigger: CTCACAGGACAGTGGCCACGGGATCCTCATGTTCACTACCCTTCATGCATGAAAGACAAAGCTACTCAGATCGCCAAACTGAGGCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414914.5
CDS CCA 90 bp AGTGTCAATGCTGCGAGTACTACTGCTCCGGTAATGAGCAGGAAGTaGAGCTCTTCGACCATCTGGTATGTCCAACGGCTTGGATACTTC +
Preference number: 5 (lower is better)
Translates to: SVNAASTTAPVMSRK*SSSTIWYVQRLGYF
Trigger: GAAGTATCCAAGCCGTTGGACATACCAGATGGTCGAAGAGCTCCACTTCCTGCTCATTACCGGAGCAGTAGTACTCGCAGCATTGACACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223145.10
ENST00000438949.1
ENST00000489405.5
ENST00000496617.2
CDS CCA 90 bp AGTGTCAATGCTGCGAGTACTACTGCTCCGGTAATGAGCAGGAAGTaGAGCTCTTCGACCATCTGGTATGTCCAACGGCTTGATCCAGTA +
Preference number: 5 (lower is better)
Translates to: SVNAASTTAPVMSRK*SSSTIWYVQRLDPV
Trigger: TACTGGATCAAGCCGTTGGACATACCAGATGGTCGAAGAGCTCCACTTCCTGCTCATTACCGGAGCAGTAGTACTCGCAGCATTGACACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430798.1
CDS TCA 90 bp TGCATGAAGGGTAGTGAACATGAGGATCCCGTGGCCACTGTCCTGTaGGGTAAGGTCCTGTTATTGTATCCAAAGAGGAGGTTCGCCTTA +
Preference number: 5 (lower is better)
Translates to: CMKGSEHEDPVATVL*GKVLLLYPKRRFAL
Trigger: TAAGGCGAACCTCCTCTTTGGATACAATAACAGGACCTTACCTCACAGGACAGTGGCCACGGGATCCTCATGTTCACTACCCTTCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000430798.1
ENST00000460897.1
ENST00000470583.5
ENST00000474269.5
ENST00000489405.5
ENST00000492797.5
CDS-3UTR CAA 90 bp AACTATGCCATGTTAGGATTCTCCCACCGAGCCAAAGTTCACTCTACCAAGCCTCTGTCTTCACAGGACTaGCTGCACTGGCCACAGATT +
Preference number: 5 (lower is better)
Translates to: NYAMLGFSHRAKVHSTKPLSSQD*LHWPQI
Trigger: AATCTGTGGCCAGTGCAGCAAGTCCTGTGAAGACAG...AGGCTTGGTAGAGTGAACTTTGGCTCGGTGGGAGAATCCTAACATGGCATAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CAA 90 bp TCTTCACAGGACTTGCTGCACTGGCCACAGATTTGGAGGAGCAATCAGGAGAAACTTATTCCTTCTACATaGCAGGGCACACGCGAAACA +
Preference number: 5 (lower is better)
Translates to: SSQDLLHWPQIWRSNQEKLIPST*QGTRET
Trigger: TGTTTCGCGTGTGCCCTGCAATGTAGAAGGAATAAG...TTTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGCAGCAAGTCCTGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CAA 90 bp AAACTATGCCATGTTAGGATTCTCCCACCGAGCCAAAGTTCACTCTACCAAGCCGGAGATGAAGCATACTaGGGTAACGGTGAGCTACTC +
Preference number: 5 (lower is better)
Translates to: KLCHVRILPPSQSSLYQAGDEAY*GNGELL
Trigger: GAGTAGCTCACCGTTACCCAAGTATGCTTCATCTCC...GGCTTGGTAGAGTGAACTTTGGCTCGGTGGGAGAATCCTAACATGGCATAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CAA 90 bp GTCACCATTTTTAGCCTCCTCCTGCTACCTCCTTACTGTCTTCACAGGACTTGCAACCACACCAGGTGTTaGTGCCATTTCCTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: VTIFSLLLLPPYCLHRTCNHTRC*CHFLKD
Trigger: GTCTTTGAGGAAATGGCACAAACACCTGGTGTGGTT...GCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAATGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS GCA 90 bp GTGACTGGCGATCTTTCTCCTTACTGTGACGACTACTCTGTTTACTaGGTTGTAGTTGCTGCCTCAGTTTGGCGATCTGCCTATGTTCAT +
Preference number: 5 (lower is better)
Translates to: VTGDLSPYCDDYSVY*VVVAASVWRSAYVH
Trigger: ATGAACATAGGCAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAGTAAGGAGAAAGATCGCCAGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474269.5
CDS GCA 90 bp GTGACTGGCGATCTTTCTCCTTACTGTGACGACTACTCTGTTTACTaGGTTGTAGTTGCTGCCTCAGTTTGGCGATCTGCTCTTTTAGTT +
Preference number: 5 (lower is better)
Translates to: VTGDLSPYCDDYSVY*VVVAASVWRSALLV
Trigger: AACTAAAAGAGCAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAGTAAGGAGAAAGATCGCCAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223145.10
ENST00000430798.1
CDS-3UTR CAA 90 bp GTTAGGGATTTGAAAAGGAATAGCTTCTTCATACAAAGCTCCCGGGGCTTGCTGAGAGCAAATCTTCTGTaGAGCAAGGGCTACCATCCT +
Preference number: 5 (lower is better)
Translates to: VRDLKRNSFFIQSSRGLLRANLL*SKGYHP
Trigger: AGGATGGTAGCCCTTGCTCAACAGAAGATTTGCTCT...CAGCAAGCCCCGGGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS GCA 90 bp GTGACTGGCGATCTTTCTCCTTACTGTGACGACTACTCTGTTTACTaGGTTGTAGTTGCTGCCTCAGTTTGGCGATCTCTTTTAGTTGAT +
Preference number: 5 (lower is better)
Translates to: VTGDLSPYCDDYSVY*VVVAASVWRSLLVD
Trigger: ATCAACTAAAAGAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAGTAAGGAGAAAGATCGCCAGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470583.5
ENST00000489405.5
CDS-3UTR CAA 90 bp ACCATTTTTAGCCTCCTCCTGCTACCTCCTTACTGTCTTCACAGGACTTGCTGCGAAAGGGTTAGGGATTaGAAAAGGAATAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TIFSLLLLPPYCLHRTCCERVRD*KRNSFF
Trigger: GAAGAAGCTATTCCTTTTCAAATCCCTAACCCTTTC...GCAGCAAGTCCTGTGAAGACAGTAAGGAGGTAGCAGGAGGAGGCTAAAAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CAA 90 bp TCAGGAGAAAGGGTTAGGGATTTGAAAAGGAATAGCTTCTTCATACAAAGCTCCGCACTGGCCACAGATTaGGAGGAGCAATCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: SGERVRDLKRNSFFIQSSALATD*EEQSGE
Trigger: TTCTCCTGATTGCTCCTCCAAATCTGTGGCCAGTGC...GGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAACCCTTTCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS TCA 90 bp AGTAGCCTGAGTGTGACTGATTGTTATATGGTTGCCATGAAGAGGTaGCTGGCGATCTTTCTCCTTACTGTGACGACTACTCTGTTTACT +
Preference number: 5 (lower is better)
Translates to: SSLSVTDCYMVAMKR*LAIFLLTVTTTLFT
Trigger: AGTAAACAGAGTAGTCGTCACAGTAAGGAGAAAGATCGCCAGTCACCTCTTCATGGCAACCATATAACAATCAGTCACACTCAGGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000430798.1
ENST00000470583.5
ENST00000474269.5
ENST00000489405.5
CDS-3UTR CAA 90 bp TCAGGAGAAAGGGTTAGGGATTTGAAAAGGAATAGCTTCTTCATACAAAGCTCCGGTATGTCCAACGGCTaGGATACTTCTTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SGERVRDLKRNSFFIQSSGMSNG*DTSSFP
Trigger: TGGGAAGGAAGAAGTATCCAAGCCGTTGGACATACC...GGAGCTTTGTATGAAGAAGCTATTCCTTTTCAAATCCCTAACCCTTTCTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CAA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGCTCAACGGTCAGAGTaGCCAAAGCTGAGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: KKIVPYTLGADETTLGFIAQRSE*PKLSSG
Trigger: GCCAGAGCTCAGCTTTGGCAACTCTGACCGTTGAGC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp AAACTATGCCATGTTAGGATTCTCCCACCGAGCCAAAGTTCACTCTACCAAGCCACCAGTTTCTATTCCTaGATGTCACCATTTTTAGCC +
Preference number: 5 (lower is better)
Translates to: KLCHVRILPPSQSSLYQATSFYS*MSPFLA
Trigger: GGCTAAAAATGGTGACATCAAGGAATAGAAACTGGT...GGCTTGGTAGAGTGAACTTTGGCTCGGTGGGAGAATCCTAACATGGCATAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438949.1
CDS-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGGTATGTCCAACGGCTaGGATACTTCTTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQGMSNG*DTSSFP
Trigger: TGGGAAGGAAGAAGTATCCAAGCCGTTGGACATACC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGGAGATGAAGCATACTaGGGTAACGGTGAGCTACTC +
Preference number: 5 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQGDEAY*GNGELL
Trigger: GAGTAGCTCACCGTTACCCAAGTATGCTTCATCTCC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGAACTTGCTGAGATTTaGCCTTGTCCGCTCTGCACA +
Preference number: 5 (lower is better)
Translates to: INSETQVFYVNEDHAPKLELAEI*PCPLCT
Trigger: TGTGCAGAGCGGACAAGGCAAAATCTCAGCAAGTTC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAAGTTGCTGCCTCAGTTaGGCGATCTGCTCTTTTAGT +
Preference number: 5 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQSCCLS*AICSFS
Trigger: ACTAAAAGAGCAGATCGCCAAACTGAGGCAGCAACT...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAACTTATTCCTTCTACATaGCAGGGCACACGCGAAACA +
Preference number: 5 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQLIPST*QGTRET
Trigger: TGTTTCGCGTGTGCCCTGCAATGTAGAAGGAATAAG...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGAGTTAGGGGAGTTCTaGAGCATAAGGTCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQELGEF*SIRSEA
Trigger: TGCTTCTGACCTTATGCTCAAGAACTCCCCTAACTC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS TCA 90 bp ACAAACAGCCTTTTGCACAATTTATCCACTACTGCCCCTATGCTTTaGCCAGTCTCCTTTATTGCAAAGCTATTTCTTATACCCTGTGTA +
Preference number: 5 (lower is better)
Translates to: TNSLLHNLSTTAPML*PVSFIAKLFLIPCV
Trigger: TACACAGGGTATAAGAAATAGCTTTGCAATAAAGGAGACTGGTCAAAGCATAGGGGCAGTAGTGGATAAATTGTGCAAAAGGCTGTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491947.1
CDS GCA 90 bp CTACTCTGTTTACTGCGTTGTAGTTGCTGCCTCAGTTTGGCGATCTaGCTATGTTCATTAGTTTTCATGAATAAAGCTTCTCAGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LLCLLRCSCCLSLAI*LCSLVFMNKASQFV
Trigger: AACAAACTGAGAAGCTTTATTCATGAAAACTAATGAACATAGGCAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAAACAGAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474269.5
CDS GCA 90 bp TCCAAACAAACAGCCTTTTGCACAATTTATCCACTACTGCCCCTATaGTTTGACCAGTCTCCTTTATTGCAAAGCTATTTCTTATACCCT +
Preference number: 5 (lower is better)
Translates to: SKQTAFCTIYPLLPL*FDQSPLLQSYFLYP
Trigger: AGGGTATAAGAAATAGCTTTGCAATAAAGGAGACTGGTCAAAGCATAGGGGCAGTAGTGGATAAATTGTGCAAAAGGCTGTTTGTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491947.1
CDS-3UTR CAA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGACTAGAGGTCCGAACTaGCTGAGATTTTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: INSETQVFYVNEDHAPKLTRGPN*LRFCLV
Trigger: GACAAGGCAAAATCTCAGCAAGTTCGGACCTCTAGT...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTAGAGCAAATCTTCTGTaGAGCAAGGGCTACCATCCT +
Preference number: 5 (lower is better)
Translates to: KKIVPYTLGADETTLGFIRANLL*SKGYHP
Trigger: AGGATGGTAGCCCTTGCTCAACAGAAGATTTGCTCT...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAACAAACACCACAGATTTaGCTGGTTCTCCTCATGTTC +
Preference number: 5 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQQTPQI*LVLLMF
Trigger: GAACATGAGGAGAACCAGCAAAATCTGTGGTGTTTG...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp ATCAATTCTGAGACCCAAGTATTCTATGTAAATGAAGATCATGCACCTAAACTGGGTAAGGTCCTGTTATaGTATCCAAAGAGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: INSETQVFYVNEDHAPKLGKVLL*YPKRRF
Trigger: GAACCTCCTCTTTGGATACAATAACAGGACCTTACC...CAGTTTAGGTGCATGATCTTCATTTACATAGAATACTTGGGTCTCAGAATTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGCTCTACCTCACAGGTaGCAAATTTCAAAACTACTC +
Preference number: 5 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQALPHR*QISKLL
Trigger: GAGTAGTTTTGAAATTTGCAACCTGTGAGGTAGAGC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTGGATGTAGGATACATTaGAGCTCAACAACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: KKIVPYTLGADETTLGFIGCRIH*SSTTSG
Trigger: CCCAGAAGTTGTTGAGCTCAAATGTATCCTACATCC...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp AAGAAAATTGTGCCATACACTTTAGGCGCAGATGAAACAACTCTAGGTTTTATTCAGATGTCTGAAATCTaGTTCCGAATCCATGGAACA +
Preference number: 5 (lower is better)
Translates to: KKIVPYTLGADETTLGFIQMSEI*FRIHGT
Trigger: TGTTCCATGGATTCGGAACAAGATTTCAGACATCTG...AATAAAACCTAGAGTTGTTTCATCTGCGCCTAAAGTGTATGGCACAATTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAAGCGAAACAGATGATTTaGGCACTGATATATTTGACA +
Preference number: 5 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQAKQMI*ALIYLT
Trigger: TGTCAAATATATCAGTGCCAAAATCATCTGTTTCGC...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS-3UTR CAA 90 bp GTTCAAGGCTATTTTCTTGAGTTTATGCTCTACCTCACAGGTTGCAAATTTCAATTCAAGGCTATTTTCTaGAGTTTATGCTCTACCTCA +
Preference number: 5 (lower is better)
Translates to: VQGYFLEFMLYLTGCKFQFKAIF*SLCSTS
Trigger: TGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAA...TTGAAATTTGCAACCTGTGAGGTAGAGCATAAACTCAAGAAAATAGCCTTGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 72 bp AGGAGGAGGCAGTGGACATGGTGGCTCTGCGGGCCCTaGACGCCGCCGGCCGACACGGAGGCGCGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: RRRQWTWWLCGP*TPPADTEARGG
Trigger: CCCGCCCCGCGCCTCCGTGTCGGCCGGCGGCGTCCAGGGCCCGCAGAGCCACCATGTCCACTGCCTCCTCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS GCA 72 bp CAGCGGCGACGGGCGGACGCGTGGGACTGTGCTGGCTaGCCCGCAAGAGCTGGTAGGGCACCGTGGCGCGGA +
Preference number: 6 (lower is better)
Translates to: QRRRADAWDCAG*PARAGRAPWRG
Trigger: TCCGCGCCACGGTGCCCTACCAGCTCTTGCGGGGCAGCCAGCACAGTCCCACGCGTCCGCCCGTCGCCGCTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 72 bp CCGGGGCTCCGTCTCTCAGGTGAGCTGCTCCTCCGGTaGCTCTCTGGGGACCGTCTCGGGCGGCCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: PGLRLSGELLLR*LSGDRLGRPLA
Trigger: GGCCAAGGGCCGCCCGAGACGGTCCCCAGAGAGCCACCGGAGGAGCAGCTCACCTGAGAGACGGAGCCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000430798.1
ENST00000492797.5
CDS GCA 72 bp CCTCGCAGGGCTGCACGCACGGGAGAACCCGGCAGCTaGAAGGAGGGCCGGGACCCCTGCTTCTGGGGACCA +
Preference number: 6 (lower is better)
Translates to: PRRAARTGEPGS*KEGRDPCFWGP
Trigger: TGGTCCCCAGAAGCAGGGGTCCCGGCCCTCCTTGCAGCTGCCGGGTTCTCCCGTGCGTGCAGCCCTGCGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 72 bp AGGAACTGGAGGAGGAGGAGGAGGAGGCAGTGGACATaGTGGCTCTGCGGGCCCTGGACGCCGCCGGCCGAC +
Preference number: 6 (lower is better)
Translates to: RNWRRRRRRQWT*WLCGPWTPPAD
Trigger: GTCGGCCGGCGGCGTCCAGGGCCCGCAGAGCCACCATGTCCACTGCCTCCTCCTCCTCCTCCTCCAGTTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 72 bp TCTGAGAGGAACTGGAGGAGGAGGAGGAGGAGGCAGTaGACATGGTGGCTCTGCGGGCCCTGGACGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SERNWRRRRRRQ*TWWLCGPWTPP
Trigger: CGGCGGCGTCCAGGGCCCGCAGAGCCACCATGTCCACTGCCTCCTCCTCCTCCTCCTCCAGTTCCTCTCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS CCA 72 bp TCCTCTGCGACGGGGGATGAGGGGTCTGAGAGGAACTaGAGGAGGAGGAGGAGGAGGCAGTGGACATGGTGG +
Preference number: 6 (lower is better)
Translates to: SSATGDEGSERN*RRRRRRQWTWW
Trigger: CCACCATGTCCACTGCCTCCTCCTCCTCCTCCTCCAGTTCCTCTCAGACCCCTCATCCCCCGTCGCAGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000223145.10
CDS GCA 72 bp GGGAGACACAGGGTGAATGACTGCTGCAGCTACTGCTaGGCTCCTGGACAGAAGGAGTCTGAGTGTCAATGC +
Preference number: 6 (lower is better)
Translates to: GRHRVNDCCSYC*APGQKESECQC
Trigger: GCATTGACACTCAGACTCCTTCTGTCCAGGAGCGCAGCAGTAGCTGCAGCAGTCATTCACCCTGTGTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000438949.1
ENST00000482540.1
ENST00000489405.5
ENST00000496617.2
CDS GCA 72 bp AAGGGGAGACACAGGGTGAATGACTGCTGCAGCTACTaGTGCGCTCCTGGACAGAAGGAGTCTGAGTGTCAA +
Preference number: 6 (lower is better)
Translates to: KGRHRVNDCCSY*CAPGQKESECQ
Trigger: TTGACACTCAGACTCCTTCTGTCCAGGAGCGCAGCAGTAGCTGCAGCAGTCATTCACCCTGTGTCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000438949.1
ENST00000482540.1
ENST00000489405.5
ENST00000496617.2
CDS CCA 72 bp GCTGCGAGTACTACTGCTCCGGTAATGAGCAGGAAGTaGAGCTCTTCGACCATCTGGTATGTCCAACGGCTG +
Preference number: 6 (lower is better)
Translates to: AASTTAPVMSRK*SSSTIWYVQRL
Trigger: CAGCCGTTGGACATACCAGATGGTCGAAGAGCTCCACTTCCTGCTCATTACCGGAGCAGTAGTACTCGCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482540.1
CDS CAA 90 bp TGTATCCAAAGAGGAGGTTCGCCTTATTGTACTAGAGGTCCGAACTaGCTGAGATTTTGCCTTGTCCGCTCTGCACACGGGCGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: CIQRGGSPYCTRGPN*LRFCLVRSAHGRAG
Trigger: CCCGGCTCGCCCGTGTGCAGAGCGGACAAGGCAAAATCTCAGCAAGTTCGGACCTCTAGTACAATAAGGCGAACCTCCTCTTTGGATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000430798.1
ENST00000460897.1
ENST00000492797.5
CDS TCA 72 bp GAGGTTCGCCTTATTGTACTAGAGGTCCGAACTTGCTaGGATTTTGCCTTGTCCGCTCTGCACACGGGCGAG +
Preference number: 6 (lower is better)
Translates to: EVRLIVLEVRTC*DFALSALHTGE
Trigger: CTCGCCCGTGTGCAGAGCGGACAAGGCAAAATCTCAGCAAGTTCGGACCTCTAGTACAATAAGGCGAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000430798.1
ENST00000460897.1
ENST00000492797.5
CDS GCA 72 bp TGCTGCGCTCCTGGACAGAAGGAGTCTGAGTGTCAATaGTGCGAGTACTACTGCTCCGGTAATGAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: CCAPGQKESECQ*CEYYCSGNEQE
Trigger: TTCCTGCTCATTACCGGAGCAGTAGTACTCGCAGCATTGACACTCAGACTCCTTCTGTCCAGGAGCGCAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000438949.1
ENST00000482540.1
ENST00000489405.5
ENST00000496617.2
CDS CCA 72 bp GCTGCGAGTACTACTGCTCCGGTAATGAGCAGGAAGTaGAGCTCTTCGACCATCTGGTATGTCCAACGGCTT +
Preference number: 6 (lower is better)
Translates to: AASTTAPVMSRK*SSSTIWYVQRL
Trigger: AAGCCGTTGGACATACCAGATGGTCGAAGAGCTCCACTTCCTGCTCATTACCGGAGCAGTAGTACTCGCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000430798.1
ENST00000438949.1
ENST00000489405.5
ENST00000496617.2
CDS CCA 72 bp CCGGTAATGAGCAGGAAGTGGAGCTCTTCGACCATCTaGTATGTCCAACGGCTTGGATACTTCTTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: PVMSRKWSSSTI*YVQRLGYFFLP
Trigger: GGGAAGGAAGAAGTATCCAAGCCGTTGGACATACCAGATGGTCGAAGAGCTCCACTTCCTGCTCATTACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223145.10
ENST00000438949.1
ENST00000489405.5
ENST00000496617.2
CDS CCA 72 bp AGCTGCTCAACGGTCAGAGTTGCCAAAGCTGAGCTCTaGCCAGAGTTAGGGGAGTTCTTGAGCATAAGGTCA +
Preference number: 6 (lower is better)
Translates to: SCSTVRVAKAEL*PELGEFLSIRS
Trigger: TGACCTTATGCTCAAGAACTCCCCTAACTCTGGCCAGAGCTCAGCTTTGGCAACTCTGACCGTTGAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223145.10
ENST00000482540.1
ENST00000489405.5
CDS CAA 72 bp AGAGGAGGTTCGCCTTATTGTACTAGAGGTCCGAACTaGCTGAGATTTTGCCTTGTCCGCTCTGCACACGGG +
Preference number: 6 (lower is better)
Translates to: RGGSPYCTRGPN*LRFCLVRSAHG
Trigger: CCCGTGTGCAGAGCGGACAAGGCAAAATCTCAGCAAGTTCGGACCTCTAGTACAATAAGGCGAACCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000430798.1
ENST00000460897.1
ENST00000492797.5
CDS TCA 72 bp GGTAGTGAACATGAGGATCCCGTGGCCACTGTCCTGTaGGGTAAGGTCCTGTTATTGTATCCAAAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GSEHEDPVATVL*GKVLLLYPKRR
Trigger: CCTCCTCTTTGGATACAATAACAGGACCTTACCTCACAGGACAGTGGCCACGGGATCCTCATGTTCACTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000430798.1
ENST00000460897.1
ENST00000470583.5
ENST00000474269.5
ENST00000489405.5
ENST00000492797.5
CDS TCA 72 bp ACAGCTAGGTGTCTGAGTAGCTTTGTCTTTCATGCATaGAGGGTAGTGAACATGAGGATCCCGTGGCCACTG +
Preference number: 6 (lower is better)
Translates to: TARCLSSFVFHA*RVVNMRIPWPL
Trigger: CAGTGGCCACGGGATCCTCATGTTCACTACCCTTCATGCATGAAAGACAAAGCTACTCAGACACCTAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223145.10
ENST00000430798.1
ENST00000470583.5
ENST00000474269.5
ENST00000489405.5
ENST00000492797.5
CDS TCA 72 bp CAGTTTGGCGATCTGAGTAGCTTTGTCTTTCATGCATaGAGGGTAGTGAACATGAGGATCCCGTGGCCACTG +
Preference number: 6 (lower is better)
Translates to: QFGDLSSFVFHA*RVVNMRIPWPL
Trigger: CAGTGGCCACGGGATCCTCATGTTCACTACCCTTCATGCATGAAAGACAAAGCTACTCAGATCGCCAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414914.5
CDS GCA 72 bp TCCAGTTCCTCTGACCTTGCTATGTCTCCTCATCTTTaGCCTATACCTGTGGTCTCCCAGTTAAGAGGCATG +
Preference number: 6 (lower is better)
Translates to: SSSSDLAMSPHL*PIPVVSQLRGM
Trigger: CATGCCTCTTAACTGGGAGACCACAGGTATAGGGCAAAGATGAGGAGACATAGCAAGGTCAGAGGAACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496617.2
CDS GCA 72 bp GATCTTTCTCCTTACTGTGACGACTACTCTGTTTACTaGGTTGTAGTTGCTGCCTCAGTTTGGCGATCTGCC +
Preference number: 6 (lower is better)
Translates to: DLSPYCDDYSVY*VVVAASVWRSA
Trigger: GGCAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAGTAAGGAGAAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474269.5
CDS CAA 90 bp TGTATCCAAAGAGGAGGTTCGCCTTATTGTACTAGAGGTCCGAACTaGCTGAGATTTTGCCTTGTCCGCATGAAAATCTCCGGTAGAGCA +
Preference number: 6 (lower is better)
Translates to: CIQRGGSPYCTRGPN*LRFCLVRMKISGRA
Trigger: TGCTCTACCGGAGATTTTCATGCGGACAAGGCAAAATCTCAGCAAGTTCGGACCTCTAGTACAATAAGGCGAACCTCCTCTTTGGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470583.5
ENST00000474269.5
CDS GCA 72 bp GATCTTTCTCCTTACTGTGACGACTACTCTGTTTACTaGGTTGTAGTTGCTGCCTCAGTTTGGCGATCTGCT +
Preference number: 6 (lower is better)
Translates to: DLSPYCDDYSVY*VVVAASVWRSA
Trigger: AGCAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAGTAAGGAGAAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223145.10
ENST00000430798.1
CDS GCA 72 bp GATCTTTCTCCTTACTGTGACGACTACTCTGTTTACTaGGTTGTAGTTGCTGCCTCAGTTTGGCGATCTGAG +
Preference number: 6 (lower is better)
Translates to: DLSPYCDDYSVY*VVVAASVWRSE
Trigger: CTCAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAGTAAGGAGAAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414914.5
CDS CAA 72 bp AGAGGAGGTTCGCCTTATTGTACTAGAGGTCCGAACTaGCTGAGATTTTGCCTTGTCCGCATGAAAATCTCC +
Preference number: 6 (lower is better)
Translates to: RGGSPYCTRGPN*LRFCLVRMKIS
Trigger: GGAGATTTTCATGCGGACAAGGCAAAATCTCAGCAAGTTCGGACCTCTAGTACAATAAGGCGAACCTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470583.5
ENST00000474269.5
CDS GCA 72 bp GATCTTTCTCCTTACTGTGACGACTACTCTGTTTACTaGGTTGTAGTTGCTGCCTCAGTTTGGCGATCTCTT +
Preference number: 6 (lower is better)
Translates to: DLSPYCDDYSVY*VVVAASVWRSL
Trigger: AAGAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAAACAGAGTAGTCGTCACAGTAAGGAGAAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470583.5
ENST00000489405.5
CDS CCA 72 bp TGTAGCTGTTGTTTGGTTTGGGAGATGAAGCATACTTaGGTAACGGTGAGCTACTCCCACTGTCTTTATCAC +
Preference number: 6 (lower is better)
Translates to: CSCCLVWEMKHT*VTVSYSHCLYH
Trigger: GTGATAAAGACAGTGGGAGTAGCTCACCGTTACCCAAGTATGCTTCATCTCCCAAACCAAACAACAGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223145.10
ENST00000438949.1
CDS TCA 72 bp AGTGTGACTGATTGTTATATGGTTGCCATGAAGAGGTaGCTGGCGATCTTTCTCCTTACTGTGACGACTACT +
Preference number: 6 (lower is better)
Translates to: SVTDCYMVAMKR*LAIFLLTVTTT
Trigger: AGTAGTCGTCACAGTAAGGAGAAAGATCGCCAGTCACCTCTTCATGGCAACCATATAACAATCAGTCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000430798.1
ENST00000470583.5
ENST00000474269.5
ENST00000489405.5
CDS CAA 72 bp AAGGAAACCATCATCATAGAGCCACATATTTTGGTCTaGAGGGTACCTCAGAGCTCACTGGTCCATTGTTTT +
Preference number: 6 (lower is better)
Translates to: KETIIIEPHILV*RVPQSSLVHCF
Trigger: AAAACAATGGACCAGTGAGCTCTGAGGTACCCTCAAGACCAAAATATGTGGCTCTATGATGATGGTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482540.1
CDS GCA 72 bp ATACCTTTTCTAATTCAGGACTTATTCCTTCTACATTaGAGGGCACACGCGAAACAGATGATTTTGGCACTG +
Preference number: 6 (lower is better)
Translates to: IPFLIQDLFLLH*RAHAKQMILAL
Trigger: CAGTGCCAAAATCATCTGTTTCGCGTGTGCCCTGCAATGTAGAAGGAATAAGTCCTGAATTAGAAAAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000438949.1
ENST00000470583.5
ENST00000474269.5
ENST00000489405.5
ENST00000496617.2
CDS GCA 72 bp ACAGCCTTTTGCACAATTTATCCACTACTGCCCCTATaGTTTGACCAGTCTCCTTTATTGCAAAGCTATTTC +
Preference number: 6 (lower is better)
Translates to: TAFCTIYPLLPL*FDQSPLLQSYF
Trigger: GAAATAGCTTTGCAATAAAGGAGACTGGTCAAAGCATAGGGGCAGTAGTGGATAAATTGTGCAAAAGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491947.1
CDS GCA 72 bp CCAAACAAACAGCCTTTTGCACAATTTATCCACTACTaGCCCTATGCTTTGACCAGTCTCCTTTATTGCAAA +
Preference number: 6 (lower is better)
Translates to: PNKQPFAQFIHY*PYALTSLLYCK
Trigger: TTTGCAATAAAGGAGACTGGTCAAAGCATAGGGGCAGTAGTGGATAAATTGTGCAAAAGGCTGTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491947.1
CDS CAA 72 bp CTACTCTGTTTACTGCGTTGTAGTTGCTGCCTCAGTTaGGCGATCTGCCTATGTTCATTAGTTTTCATGAAT +
Preference number: 6 (lower is better)
Translates to: LLCLLRCSCCLS*AICLCSLVFMN
Trigger: ATTCATGAAAACTAATGAACATAGGCAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAAACAGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474269.5
CDS CAA 90 bp AACAAACAGCCTTTTGCACAATTTATCCACTACTGCCCCTATGCTTaGACCAGTCTCCTTTATTGCAAAGCTATTTCTTATACCCTGTGT +
Preference number: 6 (lower is better)
Translates to: NKQPFAQFIHYCPYA*TSLLYCKAISYTLC
Trigger: ACACAGGGTATAAGAAATAGCTTTGCAATAAAGGAGACTGGTCAAAGCATAGGGGCAGTAGTGGATAAATTGTGCAAAAGGCTGTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491947.1
CDS GCA 72 bp TTACTGCGTTGTAGTTGCTGCCTCAGTTTGGCGATCTaGCTATGTTCATTAGTTTTCATGAATAAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: LLRCSCCLSLAI*LCSLVFMNKAS
Trigger: AGAAGCTTTATTCATGAAAACTAATGAACATAGGCAGATCGCCAAACTGAGGCAGCAACTACAACGCAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474269.5
CDS CAA 72 bp AATACCTTTTCTAATTCAGGACTTATTCCTTCTACATaGCAGGGCACACGCGAAACAGATGATTTTGGCACT +
Preference number: 6 (lower is better)
Translates to: NTFSNSGLIPST*QGTRETDDFGT
Trigger: AGTGCCAAAATCATCTGTTTCGCGTGTGCCCTGCAATGTAGAAGGAATAAGTCCTGAATTAGAAAAGGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000438949.1
ENST00000470583.5
ENST00000474269.5
ENST00000489405.5
ENST00000496617.2
CDS CAA 72 bp CCTTTTGCACAATTTATCCACTACTGCCCCTATGCTTaGACCAGTCTCCTTTATTGCAAAGCTATTTCTTAT +
Preference number: 6 (lower is better)
Translates to: PFAQFIHYCPYA*TSLLYCKAISY
Trigger: ATAAGAAATAGCTTTGCAATAAAGGAGACTGGTCAAAGCATAGGGGCAGTAGTGGATAAATTGTGCAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491947.1
CDS TCA 72 bp CTTTTGCACAATTTATCCACTACTGCCCCTATGCTTTaGCCAGTCTCCTTTATTGCAAAGCTATTTCTTATA +
Preference number: 6 (lower is better)
Translates to: LLHNLSTTAPML*PVSFIAKLFLI
Trigger: TATAAGAAATAGCTTTGCAATAAAGGAGACTGGTCAAAGCATAGGGGCAGTAGTGGATAAATTGTGCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491947.1
CDS CAA 90 bp TCTTTAATGAATACCTTTTCTAATTCAGGACTTATTCCTTCTACATaGCAGGGCACACGCGAAACAGATGATTTTGGCACTGATATATTT +
Preference number: 6 (lower is better)
Translates to: SLMNTFSNSGLIPST*QGTRETDDFGTDIF
Trigger: AAATATATCAGTGCCAAAATCATCTGTTTCGCGTGTGCCCTGCAATGTAGAAGGAATAAGTCCTGAATTAGAAAAGGTATTCATTAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223145.10
ENST00000414914.5
ENST00000438949.1
ENST00000470583.5
ENST00000474269.5
ENST00000489405.5
ENST00000496617.2