RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000170266

Ensembl transcript IDs: ENST00000307363.10, ENST00000307377.12, ENST00000399402.7, ENST00000415454.1, ENST00000436768.1, ENST00000438227.1, ENST00000440656.1, ENST00000446732.5, ENST00000450835.1, ENST00000461475.5, ENST00000464355.1, ENST00000467571.5, ENST00000473477.1, ENST00000481581.1, ENST00000482097.5, ENST00000485698.5, ENST00000497796.5, ENST00000498537.5

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTaGTCCCTGAAGGTGGGGCTTTGGCACTGCAGGGATGCAGGGAAA +
Preference number: 1 (lower is better)
Translates to: YVCTLLCCQPLTHSR*SLKVGLWHCRDAGK
Trigger: TTTCCCTGCATCCCTGCAGTGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR TCA 90 bp CACGGGCAAGTATATCATAGAGGGAGGAAGCCACTGCTTCGGTCTTaGTTGTGGAGTGAGGTTGGCCCCAGTGATCTAGCCAGCCAGTAT +
Preference number: 1 (lower is better)
Translates to: HGQVYHRGRKPLLRS*LWSEVGPSDLASQY
Trigger: ATACTGGCTGGCTAGATCACTGGGGCCAACCTCACTCCACAATCAAGACCGAAGCAGTGGCTTCCTCCCTCTATGATATACTTGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446732.5
3UTR GCA 90 bp TTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTaGTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGG +
Preference number: 1 (lower is better)
Translates to: LKLPFQPCRYVCTLL*CQPLTHSRWSLKVG
Trigger: CCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR GCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATaGACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCC +
Preference number: 1 (lower is better)
Translates to: SLPPLKLPFQPCRYV*TLLCCQPLTHSRWS
Trigger: GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR TCA 90 bp TTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTaGGGTATGTTCAGGGTAGAATCCCTCAAAGACACAGGCTTTCAT +
Preference number: 1 (lower is better)
Translates to: FHIPISEMWHDREDL*GMFRVESLKDTGFH
Trigger: ATGAAAGCCTGTGTCTTTGAGGGATTCTACCCTGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR-3UTR GCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCGTGGGGCTTTGGCACTaGAGGGATGCAGGGAAACCT +
Preference number: 2 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLVGLWH*RDAGKP
Trigger: AGGTTTCCCTGCATCCCTGCAGTGCCAAAGCCCCAC...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR-3UTR CCA 90 bp GTTGCTGCCTGTTCCAAAGTCCACCGTGGTGTAGAGGCCCTGCAGGGCCCCACACTGCACTGTTATAACTaGCCCTCCATTCTGATAGAG +
Preference number: 2 (lower is better)
Translates to: VAACSKVHRGVEALQGPTLHCYN*PSILIE
Trigger: CTCTATCAGAATGGAGGGCCAGTTATAACAGTGCAG...TGTGGGGCCCTGCAGGGCCTCTACACCACGGTGGACTTTGGAACAGGCAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438227.1
3UTR-3UTR GCA 90 bp TGCCTGTTCCAAAGTCCACCGTGGTGTAGAGGCCCTGCAGGGCCCCACATTTCACACAGGCAAAGTAGCTaGCATATTCATTTTCAACCT +
Preference number: 2 (lower is better)
Translates to: CLFQSPPWCRGPAGPHISHRQSS*HIHFQP
Trigger: AGGTTGAAAATGAATATGGCAGCTACTTTGCCTGTG...TGAAATGTGGGGCCCTGCAGGGCCTCTACACCACGGTGGACTTTGGAACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438227.1
3UTR-3UTR CCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGCCAATCAGTGAAATGTaGCATGACAGGGAGGATCTG +
Preference number: 2 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLPISEM*HDREDL
Trigger: CAGATCCTCCCTGTCATGCCACATTTCACTGATTGG...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR-3UTR GCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTAGTGGGGCTTTGGCACTaGAGGGATGCAGGGAAACCT +
Preference number: 2 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLVGLWH*RDAGKP
Trigger: AGGTTTCCCTGCATCCCTGCAGTGCCAAAGCCCCAC...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR-3UTR GCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGTTGGCACTGCAGGGATaGAGGGAAACCTCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: TTFKASIPALQICMHVTVLALQG*RETSGE
Trigger: TTCACCTGAGGTTTCCCTGCATCCCTGCAGTGCCAA...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR-3UTR GCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGGTGGGGCTTTGGCACTaGAGGGATGCAGGGAAACCT +
Preference number: 2 (lower is better)
Translates to: IKITTTFKASIPALQICMVGLWH*RDAGKP
Trigger: AGGTTTCCCTGCATCCCTGCAGTGCCAAAGCCCCAC...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR-3UTR CCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACCAATCAGTGAAATGTaGCATGACAGGGAGGATCTG +
Preference number: 2 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLPISEM*HDREDL
Trigger: CAGATCCTCCCTGTCATGCCACATTTCACTGATTGG...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR-3UTR CCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCTCACACATTCCAGGTaGTCCCTGAAGGTGGGGCTT +
Preference number: 2 (lower is better)
Translates to: IKITTTFKASIPALQICMLTHSR*SLKVGL
Trigger: AAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAG...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR-3UTR GCA 90 bp TCAGAATTGATCAAGGGTCCTTTGGGCTCACACTTCCTCTGGCTTAGGAAAGCACAGGAATGTTTTATGTaGTCCATCAGTGGTAAACAG +
Preference number: 2 (lower is better)
Translates to: SELIKGPLGSHFLWLRKAQECFM*SISGKQ
Trigger: CTGTTTACCACTGATGGAGCACATAAAACATTCCTG...TGCTTTCCTAAGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
3UTR-3UTR GCA 90 bp AGGGCCCCACATTTCAGGAATGTTTTATGTGCTCCATCAGTGGTAAACAGAACCTATTCATTTTCAACCTaGACTGTTATAACTGGCCCT +
Preference number: 2 (lower is better)
Translates to: RAPHFRNVLCAPSVVNRTYSFST*TVITGP
Trigger: AGGGCCAGTTATAACAGTGCAGGTTGAAAATGAATA...GGTTCTGTTTACCACTGATGGAGCACATAAAACATTCCTGAAATGTGGGGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000438227.1
3UTR CCA 72 bp ACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTaGTCCCTGAAGGTGGGGCTTTGGCACTGCAGGGAT +
Preference number: 3 (lower is better)
Translates to: TLLCCQPLTHSR*SLKVGLWHCRD
Trigger: ATCCCTGCAGTGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR CCA 72 bp CTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTaGCACTGCAGGGATGCAGGGAAACCTCAGGTGAAA +
Preference number: 3 (lower is better)
Translates to: LTHSRWSLKVGL*HCRDAGKPQVK
Trigger: TTTCACCTGAGGTTTCCCTGCATCCCTGCAGTGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR TCA 72 bp GTATATCATAGAGGGAGGAAGCCACTGCTTCGGTCTTaGTTGTGGAGTGAGGTTGGCCCCAGTGATCTAGCC +
Preference number: 3 (lower is better)
Translates to: VYHRGRKPLLRS*LWSEVGPSDLA
Trigger: GGCTAGATCACTGGGGCCAACCTCACTCCACAATCAAGACCGAAGCAGTGGCTTCCTCCCTCTATGATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
3UTR GCA 72 bp CCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATaGACGTTACTGTGCTGTCAGCCCCTCACACATTCC +
Preference number: 3 (lower is better)
Translates to: PLKLPFQPCRYV*TLLCCQPLTHS
Trigger: GGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
3UTR CCA 72 bp GAATTGATCAAGGGTCCTTTGGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTGATGTTGCTGCCTGTT +
Preference number: 3 (lower is better)
Translates to: ELIKGPLGSHFL*LRKASVMLLPV
Trigger: AACAGGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
3UTR GCA 72 bp AAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTaGAGATATGTATGCACGTTACTGTGCTGTCAGCCC +
Preference number: 3 (lower is better)
Translates to: KSLPPLKLPFQP*RYVCTLLCCQP
Trigger: GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCTGAGGGCCCCGGGCTaGCCAATAGCGGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWLRAPG*PIAAKV
Trigger: AACCTTGGCCGCTATTGGCCAGCCCGGGGCCCTCAG...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCAGCGACCGAGCTGCCTaGAAGGACGCGCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLSDRAA*KDARPA
Trigger: GGCGGGGCGCGCGTCCTTCCAGGCAGCTCGGTCGCT...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCAAACATCCTCTGGGTaGCATTGCGCAAGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWQTSSG*HCASRA
Trigger: CGCGCGGCTTGCGCAATGCCACCCAGAGGATGTTTG...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000307377.12
CDS-3UTR CCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCACGCTCAAGGACTCCCTaGGGGATCCCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALARSRTP*GIPSTA
Trigger: TGCTGTGGATGGGATCCCCCAGGGAGTCCTTGAGCG...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCTGAAGGTGGGGCTTTaGCACTGCAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWLKVGL*HCRDAG
Trigger: CCCTGCATCCCTGCAGTGCCAAAGCCCCACCTTCAG...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCACAGGTGGCTGCACACTaGATCCTCAGTGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAQVAAH*ILSVQW
Trigger: CCACTGGACACTGAGGATGCAGTGTGCAGCCACCTG...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCATCCCATTTCCCACTCTaGACAGATGTAGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALASHFPL*TDVGPG
Trigger: CCCGGGCCCTACATCTGTGCAGAGTGGGAAATGGGA...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCCACAAGCGACCGAGCTaGCTGGAAGGACGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLHKRPS*LEGRAP
Trigger: GGGCGCGCGTCCTTCCAGGCAGCTCGGTCGCTTGTG...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS-3UTR CCA 90 bp GTTGCTGCCTGTTCCAAAGTCCACCGTGGTGTAGAGGCCCTGCAGGGCCCCACAGGAGAGGCTTCATCTTaGGCAGAAGGACTCCCAACC +
Preference number: 4 (lower is better)
Translates to: VAACSKVHRGVEALQGPTGEASS*AEGLPT
Trigger: GGTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCC...TGTGGGGCCCTGCAGGGCCTCTACACCACGGTGGACTTTGGAACAGGCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGGCCCAGGCTTCATCATaGTGGCCACTGTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWAQASS*WPLSRC
Trigger: ACACCGTGACAGTGGCCACCATGATGAAGCCTGGGC...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGGTCCTGGGGCAAGTCTaGGATCCCACTGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWVLGQV*DPTGNG
Trigger: TCCATTCCCAGTGGGATCCCAGACTTGCCCCAGGAC...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTCCAGTTCCAGCACGGTaGTGGTGTTTGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGPVPAR*WCLGPR
Trigger: CCTCGGCCCCAAACACCATCACCGTGCTGGAACTGG...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCTGGATCATCACTGCTaGAGGGTGCCCACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWLDHHC*RVPTPV
Trigger: AACTGGAGTGGGCACCCTGCAGCAGTGATGATCCAG...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp AGAACCACATCATCCCCCAGATGGTGGCGAAAGCGCTTCTGCAGGAAGCGCAGGCCACTTGTCCACAGCTaGCAGGTAATGCGCAAGCCG +
Preference number: 4 (lower is better)
Translates to: RTTSSPRWWRKRFCRKRRPLVHS*QVMRKP
Trigger: CGGCTTGCGCATTACCTGGCAGCTGTGGACAAGTGG...CCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGATGTGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438227.1
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGGGAGAGGCTTCATCTTaGGCAGAAGGACTCCCAACC +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWGEASS*AEGLPT
Trigger: GGTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCC...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCACATAGTCGTAGCTGGTaGGCTGTGCTGCATAGGGTG +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAHSRSW*AVLHRV
Trigger: CACCCTATGCAGCACAGCCCACCAGCTACGACTATG...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGCCGGGAGCGTGTAGTTaGATGAGTTGTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVPGACS*MSCGPR
Trigger: CCTGGGCCCACAACTCATCCAACTACACGCTCCCGG...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CACATCATCCCCCAGATGGTGGCGAAAGCGCTTCTGCAGGAAGCGCAGGTAGTCTCATCCCCCAGATGGTaGCGAAAGCGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HIIPQMVAKALLQEAQVVSSPRW*RKRFCR
Trigger: CCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGA...GACTACCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR TCA 90 bp TGCCTGTTCCAAAGTCCACCGTGGTGTAGAGGCCCTGCAGGGCCCCACATTTCACCACTGCTTCGGTCTTaGTTGTGGAGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: CLFQSPPWCRGPAGPHISPLLRS*LWSEVG
Trigger: GCCAACCTCACTCCACAATCAAGACCGAAGCAGTGG...TGAAATGTGGGGCCCTGCAGGGCCTCTACACCACGGTGGACTTTGGAACAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR TCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCAAGGGATAAAGGCTTTTaGTGGGCCCAGAGGGACACA +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALARDKGF*WAQRDT
Trigger: TGTGTCCCTCTGGGCCCATCAAAAGCCTTTATCCCT...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCCAGTTCCAGCACGGTaGTGGTGTTTGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPPVPAR*WCLGPR
Trigger: CCTCGGCCCCAAACACCATCACCGTGCTGGAACTGG...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGGAGGGAGGAAGCCACTaGTTCGGTCTTGATTGTGGA +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWEGGSH*FGLDCG
Trigger: TCCACAATCAAGACCGAAGCAGTGGCTTCCTCCCTC...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGGAGGTCATCAGGATGTaGTGGGGCACAAACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWEVIRM*WGTNKV
Trigger: GACCTTGTTTGTGCCCCAGCACATCCTGATGACCTC...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGATCACTGCTGCAGGGTaGCCACTCCAGTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVITAAG*PLQFQH
Trigger: GTGCTGGAACTGGAGTGGGCACCCTGCAGCAGTGAT...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCAGTCCATCCAGGAAACTaGATAAAGGTGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAVHPGN*IKVSWG
Trigger: GCCCCAGGACACCTTTATCCAGTTTCCTGGATGGAC...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCACCATTAATCCAGACCTaGCCCTTGGTCCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAPLIQT*PLVHPG
Trigger: TCCTGGATGGACCAAGGGCCAGGTCTGGATTAATGG...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGATCGTAGGTCACAGATaGGCCAATAACTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWIVGHR*ANNWPV
Trigger: GACAGGCCAGTTATTGGCTCATCTGTGACCTACGAT...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTCAGGTGGCTGCACACTaGATCCTCAGTGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGQVAAH*ILSVQW
Trigger: CCACTGGACACTGAGGATGCAGTGTGCAGCCACCTG...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCAGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTG +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAGSHFL*LRKASV
Trigger: CACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCC...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGCGCTCAAGGACTCCCTaGGGGATCCCATCCACAGCA +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLRSRTP*GIPSTA
Trigger: TGCTGTGGATGGGATCCCCCAGGGAGTCCTTGAGCG...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCCCGGGAGCGTGTAGTTaGATGAGTTGTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SFHSSPADMYARYCAVSPPGACS*MSCGPR
Trigger: CCTGGGCCCACAACTCATCCAACTACACGCTCCCGG...GGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGTCCTGGGGCAAGTCTaGGATCCCACTGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGVLGQV*DPTGNG
Trigger: TCCATTCCCAGTGGGATCCCAGACTTGCCCCAGGAC...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCAGTCATCAGGATGTGCTaGGGCACAAACAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAVIRMC*GTNKVN
Trigger: GTTGACCTTGTTTGTGCCCCAGCACATCCTGATGAC...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGGTCATCAGGATGTGCTaGGGCACAAACAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWVIRMC*GTNKVN
Trigger: GTTGACCTTGTTTGTGCCCCAGCACATCCTGATGAC...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCTGAAGGTGGGGCTTTaGCACTGCAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPLKVGL*HCRDAG
Trigger: CCCTGCATCCCTGCAGTGCCAAAGCCCCACCTTCAG...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCCAGGGCACATACGTCTaGATGGCGTTCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLQGTYV*MAFSPA
Trigger: GGCTGGGCTGAACGCCATCCAGACGTATGTGCCCTG...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGACATCATCCCCCAGATaGTGGCGAAAGCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVTSSPR*WRKRFC
Trigger: GCAGAAGCGCTTTCGCCACCATCTGGGGGATGATGT...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR TCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGATGGCTGGCCATCCTTaGGGAAGGAGTCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLMAGHP*GRSPGY
Trigger: ATAGCCGGGACTCCTTCCTCAAGGATGGCCAGCCAT...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCAGTTCCAGCACGGTaGTGGTGTTTGGGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSAPVPAR*WCLGPR
Trigger: CCTCGGCCCCAAACACCATCACCGTGCTGGAACTGG...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp AGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCATTCCAGGTGGTCCCTaGAGGTGGGGCTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: SFHSSPADMYARYCAVSPIPGGP*RWGFGT
Trigger: AGTGCCAAAGCCCCACCTTCAGGGACCACCTGGAAT...GGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp AGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCATCACTGCTGCAGGGTaGCCACTCCAGTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SFHSSPADMYARYCAVSPITAAG*PLQFQH
Trigger: GTGCTGGAACTGGAGTGGGCACCCTGCAGCAGTGAT...GGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGTTCTGGATCATCACTaGTGCAGGGTGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGVLDHH*CRVPTP
Trigger: TGGAGTGGGCACCCTGCAGCAGTGATGATCCAGAAC...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGGTGGGGCTTTGGCACTaGAGGGATGCAGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLVGLWH*RDAGKP
Trigger: AGGTTTCCCTGCATCCCTGCAGTGCCAAAGCCCCAC...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCCGGGAGCGTGTAGTTaGATGAGTTGTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPPGACS*MSCGPR
Trigger: CCTGGGCCCACAACTCATCCAACTACACGCTCCCGG...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTTTCCAAAGTCCACCGTaGTGTAGAGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPFQSPP*CRGPAG
Trigger: CCCTGCAGGGCCTCTACACCACGGTGGACTTTGGAA...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR TCA 90 bp GATGGTGGCGAAAGCGCTTCTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCAACCACTGCTTCGGTCTTaGTTGTGGAGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: DGGESASAGSAGSQNHRQPLLRS*LWSEVG
Trigger: GCCAACCTCACTCCACAATCAAGACCGAAGCAGTGG...TTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR TCA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGTTGCTGCAATCTTaGGGAAGTGTTGTCCGGTAC +
Preference number: 4 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGGLLQS*GSVVRY
Trigger: GTACCGGACAACACTTCCTCAAGATTGCAGCAACCC...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGATCGTAGGTCACAGATaGGCCAATAACTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVIVGHR*ANNWPV
Trigger: GACAGGCCAGTTATTGGCTCATCTGTGACCTACGAT...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp CCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTCCTGGCCAGGGCTCATaGAAGTTCCAGGGCACATAC +
Preference number: 4 (lower is better)
Translates to: PADMYARYCAVSPSHIPGPGQGS*KFQGTY
Trigger: GTATGTGCCCTGGAACTTTCATGAGCCCTGGCCAGG...ACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp AGCATCTGTGATGTTGCTGCCTGTTCCAAAGTCCACCGTGGTGTAGAGGCCCTGGAGGGAGGAAGCCACTaGTTCGGTCTTGATTGTGGA +
Preference number: 4 (lower is better)
Translates to: SICDVAACSKVHRGVEALEGGSH*FGLDCG
Trigger: TCCACAATCAAGACCGAAGCAGTGGCTTCCTCCCTC...CAGGGCCTCTACACCACGGTGGACTTTGGAACAGGCAGCAACATCACAGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR GCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGATCCACAGCAACATATaGTCGATCGTGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWIHSNI*SIVDSI
Trigger: AATGGAGTCCACGATCGAGCATATGTTGCTGTGGAT...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCACTTCCATTCCAGCCCTaGAGATATGTATGCACGTTA +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALALPFQP*RYVCTL
Trigger: TAACGTGCATACATATCTGCAGGGCTGGAATGGAAG...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCTGCACTGTTATAACTaGCCCTCCATTCTGATAGAG +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWLHCYN*PSILIE
Trigger: CTCTATCAGAATGGAGGGCCAGTTATAACAGTGCAG...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCAAAACTTTGGTGTAGATaGAGGGATAGGACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAKLWCR*RDRTFW
Trigger: CCAGAAGGTCCTATCCCTCCATCTACACCAAAGTTT...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTCCAGAAGGTCCAGAGTaGCTCCAGCTTTCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGPEGPE*LQLSLL
Trigger: TAACAGGGAAAGCTGGAGCCACTCTGGACCTTCTGG...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCGCCCAGGCTTCATCATaGTGGCCACTGTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPAQASS*WPLSRC
Trigger: ACACCGTGACAGTGGCCACCATGATGAAGCCTGGGC...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCGCCCAGGCTTCATCATaGTGGCCACTGTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSAQASS*WPLSRC
Trigger: ACACCGTGACAGTGGCCACCATGATGAAGCCTGGGC...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCCACGGTGATGGTGTTTaGGGCCGAGGTCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLHGDGV*GRGHQD
Trigger: ATCCTGATGACCTCGGCCCCAAACACCATCACCGTG...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACGGTGATGGTGTTTaGGGCCGAGGTCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPHGDGV*GRGHQD
Trigger: ATCCTGATGACCTCGGCCCCAAACACCATCACCGTG...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GGCTCACACTTCCTCTGGCTTAGGAAAGCATCTGTGATGTTGCTGCCTGTTCCATCATCCCCCAGATGGTaGCGAAAGCGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSHFLWLRKASVMLLPVPSSPRW*RKRFCR
Trigger: CCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGA...TGGAACAGGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp GCGAAAGCGCTTCTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCAAAGTAGCTTTCCAAAGTCCACCGTaGTGTAGAGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AKALLQEAQVVKITGKVAFQSPP*CRGPAG
Trigger: CCCTGCAGGGCCTCTACACCACGGTGGACTTTGGAA...AGCTACTTTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAGAAGCGCTTTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR GCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGGAGGGAGGAAGCCACTaGTTCGGTCTTGATTGTGGA +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLEGGSH*FGLDCG
Trigger: TCCACAATCAAGACCGAAGCAGTGGCTTCCTCCCTC...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCGTTCTGGATCATCACTaGTGCAGGGTGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPVLDHH*CRVPTP
Trigger: TGGAGTGGGCACCCTGCAGCAGTGATGATCCAGAAC...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGTTGGCACTGCAGGGATaGAGGGAAACCTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLLALQG*RETSGE
Trigger: TTCACCTGAGGTTTCCCTGCATCCCTGCAGTGCCAA...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGCCCTGCAGATATGTATaGACGTTACTGTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVPCRYV*TLLCCQ
Trigger: CTGACAGCACAGTAACGTGCATACATATCTGCAGGG...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCAGGTAATGTCTGGATaGCGTTCAGCCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPQVMSG*RSAQPS
Trigger: AGATGGCTGGGCTGAACGCCATCCAGACATTACCTG...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307377.12
CDS-3UTR CCA 90 bp AGAACCACATCATCCCCCAGATGGTGGCGAAAGCGCTTCTGCAGGAAGCGCAGGCTGCACTGTTATAACTaGCCCTCCATTCTGATAGAG +
Preference number: 4 (lower is better)
Translates to: RTTSSPRWWRKRFCRKRRLHCYN*PSILIE
Trigger: CTCTATCAGAATGGAGGGCCAGTTATAACAGTGCAG...CCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGATGTGGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp AGCATCTGTGATGTTGCTGCCTGTTCCAAAGTCCACCGTGGTGTAGAGGCCCTGGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTG +
Preference number: 4 (lower is better)
Translates to: SICDVAACSKVHRGVEALGSHFL*LRKASV
Trigger: CACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCC...CAGGGCCTCTACACCACGGTGGACTTTGGAACAGGCAGCAACATCACAGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp ATCTGTGATGTTGCTGCCTGTTCCAAAGTCCACCGTGGTGTAGAGGCCCTGCAGGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTG +
Preference number: 4 (lower is better)
Translates to: ICDVAACSKVHRGVEALQGSHFL*LRKASV
Trigger: CACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCC...CTGCAGGGCCTCTACACCACGGTGGACTTTGGAACAGGCAGCAACATCACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp CCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTCATAGTCGTAGCTGGTaGGCTGTGCTGCATAGGGTG +
Preference number: 4 (lower is better)
Translates to: PADMYARYCAVSPSHIPGHSRSW*AVLHRV
Trigger: CACCCTATGCAGCACAGCCCACCAGCTACGACTATG...ACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGCATCATAGTCGTAGCTaGTGGGCTGTGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLHHSRS*WAVLHR
Trigger: CCTATGCAGCACAGCCCACCAGCTACGACTATGATG...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCCATCATAGTCGTAGCTaGTGGGCTGTGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLHHSRS*WAVLHR
Trigger: CCTATGCAGCACAGCCCACCAGCTACGACTATGATG...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTATCCTCAGTGTCCAGTaGAAAGATCGTCCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGILSVQ*KDRPVR
Trigger: ACGGACTGGACGATCTTTCCACTGGACACTGAGGAT...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCAGTCTGGGATCCCACTaGGAATGGAGAAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLSLGSH*EWRSSP
Trigger: TGGGGAACTTCTCCATTCCCAGTGGGATCCCAGACT...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTAGTCTGGGATCCCACTaGGAATGGAGAAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPSLGSH*EWRSSP
Trigger: TGGGGAACTTCTCCATTCCCAGTGGGATCCCAGACT...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGGTCCATCCAGGAAACTaGATAAAGGTGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLVHPGN*IKVSWG
Trigger: GCCCCAGGACACCTTTATCCAGTTTCCTGGATGGAC...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGCCATTAATCCAGACCTaGCCCTTGGTCCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLPLIQT*PLVHPG
Trigger: TCCTGGATGGACCAAGGGCCAGGTCTGGATTAATGG...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTACTGAGGGCCCCGGGCTaGCCAATAGCGGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: ISTFQSVKCGMTGRICEVLRAPG*PIAAKV
Trigger: AACCTTGGCCGCTATTGGCCAGCCCGGGGCCCTCAG...TACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCACTGAGGGCCCCGGGCTaGCCAATAGCGGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSLRAPG*PIAAKV
Trigger: AACCTTGGCCGCTATTGGCCAGCCCGGGGCCCTCAG...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGCCAATCAGTGAAATGTaGCATGACAGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVPISEM*HDREDL
Trigger: CAGATCCTCCCTGTCATGCCACATTTCACTGATTGG...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCGCACATACGTCTGGATaGCGTTCAGCCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPAHTSG*RSAQPS
Trigger: AGATGGCTGGGCTGAACGCCATCCAGACGTATGTGC...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp CTCTGGCTTAGGAAAGCATCTGTGATGTTGCTGCCTGTTCCAAAGTCCACCGTGACATCATCCCCCAGATaGTGGCGAAAGCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LWLRKASVMLLPVPKSTVTSSPR*WRKRFC
Trigger: GCAGAAGCGCTTTCGCCACCATCTGGGGGATGATGT...CACGGTGGACTTTGGAACAGGCAGCAACATCACAGATGCTTTCCTAAGCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp AGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCACACCTCGTTACAGATaGGGAAGTGGATCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: SFHSSPADMYARYCAVSPTPRYR*GSGSKR
Trigger: GCGCTTGGATCCACTTCCCCATCTGTAACGAGGTGT...GGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS-3UTR TCA 90 bp TCACACTTCCTCTGGCTTAGGAAAGCATCTGTGATGTTGCTGCCTGTTCCAAAGATGGCTGGCCATCCTTaGGGAAGGAGTCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: SHFLWLRKASVMLLPVPKMAGHP*GRSPGY
Trigger: ATAGCCGGGACTCCTTCCTCAAGGATGGCCAGCCAT...CTTTGGAACAGGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446732.5
CDS-3UTR TCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCACTGCTTCGGTCTTaGTTGTGGAGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSAPLLRS*LWSEVG
Trigger: GCCAACCTCACTCCACAATCAAGACCGAAGCAGTGG...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp AGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCAGCAGTCCCAGCTCATaGGCCAGCCGAAGAAAATAT +
Preference number: 4 (lower is better)
Translates to: SFHSSPADMYARYCAVSPSSPSS*ASRRKY
Trigger: ATATTTTCTTCGGCTGGCTCATGAGCTGGGACTGCT...GGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCTGGATCATCACTGCTaGAGGGTGCCCACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSALDHHC*RVPTPV
Trigger: AACTGGAGTGGGCACCCTGCAGCAGTGATGATCCAG...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp CCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTTTGGCACTGCAGGGATaGAGGGAAACCTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: PADMYARYCAVSPSHIPGLALQG*RETSGE
Trigger: TTCACCTGAGGTTTCCCTGCATCCCTGCAGTGCCAA...ACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCGTATGCACGTTACTGTaGTGTCAGCCCCTCACACAT +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLVCTLL*CQPLTH
Trigger: ATGTGTGAGGGGCTGACAGCACAGTAACGTGCATAC...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTGTATGCACGTTACTGTaGTGTCAGCCCCTCACACAT +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPVCTLL*CQPLTH
Trigger: ATGTGTGAGGGGCTGACAGCACAGTAACGTGCATAC...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCACACAGGCAAAGTAGCTaGCATATTCATTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAHRQSS*HIHFQP
Trigger: AGGTTGAAAATGAATATGGCAGCTACTTTGCCTGTG...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp TCACACTTCCTCTGGCTTAGGAAAGCATCTGTGATGTTGCTGCCTGTTCCAAAGCTGCCAGGTAATGTCTaGATGGCGTTCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SHFLWLRKASVMLLPVPKLPGNV*MAFSPA
Trigger: GGCTGGGCTGAACGCCATCCAGACATTACCTGGCAG...CTTTGGAACAGGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446732.5
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGAGGGATAGGACCTTCTaGTACTTTTTCAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWRDRTF*YFFKLL
Trigger: CAGAAGTTTGAAAAAGTACCAGAAGGTCCTATCCCT...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCAGTCTGGGATCCCACTaGGAATGGAGAAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSSLGSH*EWRSSP
Trigger: TGGGGAACTTCTCCATTCCCAGTGGGATCCCAGACT...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCGTCCATCCAGGAAACTaGATAAAGGTGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSVHPGN*IKVSWG
Trigger: GCCCCAGGACACCTTTATCCAGTTTCCTGGATGGAC...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCTCCAGACCTGGCCCTTaGTCCATCCAGGAAACTGGA +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSASRPGP*SIQETG
Trigger: TCCAGTTTCCTGGATGGACCAAGGGCCAGGTCTGGA...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTCCATTAATCCAGACCTaGCCCTTGGTCCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PADMYARYCAVSPSHIPGPLIQT*PLVHPG
Trigger: TCCTGGATGGACCAAGGGCCAGGTCTGGATTAATGG...ACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTGTCATCAGGATGTGCTaGGGCACAAACAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPVIRMC*GTNKVN
Trigger: GTTGACCTTGTTTGTGCCCCAGCACATCCTGATGAC...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTCCAATCAGTGAAATGTaGCATGACAGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGPISEM*HDREDL
Trigger: CAGATCCTCCCTGTCATGCCACATTTCACTGATTGG...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCATCGTAGGTCACAGATaGGCCAATAACTGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSIVGHR*ANNWPV
Trigger: GACAGGCCAGTTATTGGCTCATCTGTGACCTACGAT...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGATTCCAGGTGGTCCCTaGAGGTGGGGCTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICEIPGGP*RWGFGT
Trigger: AGTGCCAAAGCCCCACCTTCAGGGACCACCTGGAAT...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGATTCCAGGTGGTCCCTaGAGGTGGGGCTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: TTFKASIPALQICMHVTVIPGGP*RWGFGT
Trigger: AGTGCCAAAGCCCCACCTTCAGGGACCACCTGGAAT...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp CAGATGGTGGCGAAAGCGCTTCTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCTTAGGAAAGCATCTGTaGTGTTGCTGCCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: QMVAKALLQEAQVVKITGLGKHL*CCCLFQ
Trigger: TTGGAACAGGCAGCAACATCACAGATGCTTTCCTAA...GCCTGTGATTTTGACTACCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR GCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTTGTGATGTTGCTGCCTaGACTGTTATAACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPCDVAA*TVITGP
Trigger: AGGGCCAGTTATAACAGTGCAGGCAGCAACATCACA...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307377.12
CDS-3UTR GCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCGAGGGAGGAAGCCACTaGTTCGGTCTTGATTGTGGA +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSAEGGSH*FGLDCG
Trigger: TCCACAATCAAGACCGAAGCAGTGGCTTCCTCCCTC...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTATCCACAGCAACATATaGTCGATCGTGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGIHSNI*SIVDSI
Trigger: AATGGAGTCCACGATCGAGCATATGTTGCTGTGGAT...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCAGGTGGCTGCACACTaGATCCTCAGTGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TTFKASIPALQICMHVTVQVAAH*ILSVQW
Trigger: CCACTGGACACTGAGGATGCAGTGTGCAGCCACCTG...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGATCACTGCTGCAGGGTaGCCACTCCAGTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICEITAAG*PLQFQH
Trigger: GTGCTGGAACTGGAGTGGGCACCCTGCAGCAGTGAT...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTGGGGCTTTGGCACTaGAGGGATGCAGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICEVGLWH*RDAGKP
Trigger: AGGTTTCCCTGCATCCCTGCAGTGCCAAAGCCCCAC...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGCCCTGCAGATATGTATaGACGTTACTGTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLPCRYV*TLLCCQ
Trigger: CTGACAGCACAGTAACGTGCATACATATCTGCAGGG...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACAAACATCCTCTGGGTaGCATTGCGCAAGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLQTSSG*HCASRA
Trigger: CGCGCGGCTTGCGCAATGCCACCCAGAGGATGTTTG...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000307377.12
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGACTTTTTCAAACTTCTaGATGATGTTTCGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWTFSNF*MMFRRA
Trigger: TGCTCTGCGAAACATCATCCAGAAGTTTGAAAAAGT...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCATCCTCAGTGTCCAGTaGAAAGATCGTCCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPILSVQ*KDRPVR
Trigger: ACGGACTGGACGATCTTTCCACTGGACACTGAGGAT...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTATCCTCAGTGTCCAGTaGAAAGATCGTCCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: PADMYARYCAVSPSHIPGILSVQ*KDRPVR
Trigger: ACGGACTGGACGATCTTTCCACTGGACACTGAGGAT...ACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCAGGCTTCATCATGGTaGCCACTGTCACGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: TTFKASIPALQICMHVTVQASSW*PLSRCP
Trigger: GGGACACCGTGACAGTGGCCACCATGATGAAGCCTG...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTCCTGGGGCAAGTCTaGGATCCCACTGGGAATGGA +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICEVLGQV*DPTGNG
Trigger: TCCATTCCCAGTGGGATCCCAGACTTGCCCCAGGAC...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCATTTCATCATCATACATaGTCCAGCCATGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAFHHHT*SSHESL
Trigger: CAAAGATTCATGGCTGGACCATGTATGATGATGAAA...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCACTGAAGGTGGGGCTTTaGCACTGCAGGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSLKVGL*HCRDAG
Trigger: CCCTGCATCCCTGCAGTGCCAAAGCCCCACCTTCAG...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCCAGGGCACATACGTCTaGATGGCGTTCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRIQGTYV*MAFSPA
Trigger: GGCTGGGCTGAACGCCATCCAGACGTATGTGCCCTG...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGAGCTGCCAGGTAATCTaGGTCGGAGGAGCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICESCQVI*VGGAEK
Trigger: CTTCTCCGCTCCTCCGACCCAGATTACCTGGCAGCT...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp GGCCCCACATTTCAGGAATGTTTTATGTGCTCCATCAGTGGTAAACAGAACCACTTCCAAAGTCCACCGTaGTGTAGAGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPTFQECFMCSISGKQNHFQSPP*CRGPAG
Trigger: CCCTGCAGGGCCTCTACACCACGGTGGACTTTGGAA...GTGGTTCTGTTTACCACTGATGGAGCACATAAAACATTCCTGAAATGTGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGTTCAAGTTAGTGAAGTaGTTTATTCAGCCCACTCAA +
Preference number: 4 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWFKLVK*FIQPTQ
Trigger: TTGAGTGGGCTGAATAAACCACTTCACTAACTTGAA...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCAAACATCCTCTGGGTaGCATTCTCGTCTCAACACC +
Preference number: 4 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSQTSSG*HSRLNT
Trigger: GGTGTTGAGACGAGAATGCCACCCAGAGGATGTTTG...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS-3UTR TCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGATGGCTGGCCATCCTTaGGGAAGGAGTCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLMAGHP*GRSPGY
Trigger: ATAGCCGGGACTCCTTCCTCAAGGATGGCCAGCCAT...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp ATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTAATGGCTGGCCATCCTTaGGGAAGGAGTCCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: ISTFQSVKCGMTGRICEVMAGHP*GRSPGY
Trigger: ATAGCCGGGACTCCTTCCTCAAGGATGGCCAGCCAT...TACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGCCACTGCTTCGGTCTTaGTTGTGGAGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICEPLLRS*LWSEVG
Trigger: GCCAACCTCACTCCACAATCAAGACCGAAGCAGTGG...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACCTGGCCAGGGCTCATaGAAGTTCCAGGGCACATAC +
Preference number: 4 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLPGQGS*KFQGTY
Trigger: GTATGTGCCCTGGAACTTTCATGAGCCCTGGCCAGG...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCACGGGAGTAGTGAATaGTTCCTGAGATGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSHGSSE*FLRCSE
Trigger: TTCGCTACATCTCAGGAAGCATTCACTACTCCCGTG...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCAGAGAGGTGCTGGGTTaGTGCAATCTTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSAREVLG*CNLEEV
Trigger: CACTTCCTCAAGATTGCAGCAACCCAGCACCTCTCT...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCCTTCCATTCCAGCCCTaGAGATATGTATGCACGTTA +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLLPFQP*RYVCTL
Trigger: TAACGTGCATACATATCTGCAGGGCTGGAATGGAAG...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTATCCCATTTCCCACTCTaGACAGATGTAGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLSHFPL*TDVGPG
Trigger: CCCGGGCCCTACATCTGTGCAGAGTGGGAAATGGGA...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCTGCACTGTTATAACTaGCCCTCCATTCTGATAGAG +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPLHCYN*PSILIE
Trigger: CTCTATCAGAATGGAGGGCCAGTTATAACAGTGCAG...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GATGGTGGCGAAAGCGCTTCTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCAACTGCACTGTTATAACTaGCCCTCCATTCTGATAGAG +
Preference number: 4 (lower is better)
Translates to: DGGESASAGSAGSQNHRQLHCYN*PSILIE
Trigger: CTCTATCAGAATGGAGGGCCAGTTATAACAGTGCAG...TTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTG +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSAGSHFL*LRKASV
Trigger: CACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCC...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGAGGGATAGGACCTTCTaGTACTTTTTCAAACTTCTG +
Preference number: 4 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVRDRTF*YFFKLL
Trigger: CAGAAGTTTGAAAAAGTACCAGAAGGTCCTATCCCT...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCAAACTTTGGTGTAGATaGAGGGATAGGACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLKLWCR*RDRTFW
Trigger: CCAGAAGGTCCTATCCCTCCATCTACACCAAAGTTT...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCCAGGCTTCATCATGGTaGCCACTGTCACGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRIQASSW*PLSRCP
Trigger: GGGACACCGTGACAGTGGCCACCATGATGAAGCCTG...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGCAGGCTTCATCATGGTaGCCACTGTCACGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLQASSW*PLSRCP
Trigger: GGGACACCGTGACAGTGGCCACCATGATGAAGCCTG...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGTCCAGACCTGGCCCTTaGTCCATCCAGGAAACTGGA +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICESRPGP*SIQETG
Trigger: TCCAGTTTCCTGGATGGACCAAGGGCCAGGTCTGGA...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGTCCAGACCTGGCCCTTaGTCCATCCAGGAAACTGGA +
Preference number: 4 (lower is better)
Translates to: TTFKASIPALQICMHVTVSRPGP*SIQETG
Trigger: TCCAGTTTCCTGGATGGACCAAGGGCCAGGTCTGGA...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTCCAATCAGTGAAATGTaGCATGACAGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: PADMYARYCAVSPSHIPGPISEM*HDREDL
Trigger: CAGATCCTCCCTGTCATGCCACATTTCACTGATTGG...ACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCAAACTGGTACTGTCCTaGCCAGGGCTCATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPKLVLS*PGLMKV
Trigger: AACTTTCATGAGCCCTGGCCAGGACAGTACCAGTTT...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGTGGTCCTCAGAAAACTaGTACTGTCCTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICEWSSEN*YCPGQG
Trigger: GCCCTGGCCAGGACAGTACCAGTTTTCTGAGGACCA...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCAGCTGCCAGGTAATCTaGGTCGGAGGAGCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRISCQVI*VGGAEK
Trigger: CTTCTCCGCTCCTCCGACCCAGATTACCTGGCAGCT...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTCATCCCCCAGATGGTaGCGAAAGCGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRISSPRW*RKRFCR
Trigger: CCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGA...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCATCATCCCCCAGATGGTaGCGAAAGCGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSSSPRW*RKRFCR
Trigger: CCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGA...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp CAGGGCCCCACATTTCAGGAATGTTTTATGTGCTCCATCAGTGGTAAACAGAACACATCATCCCCCAGATaGTGGCGAAAGCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QGPTFQECFMCSISGKQNTSSPR*WRKRFC
Trigger: GCAGAAGCGCTTTCGCCACCATCTGGGGGATGATGT...GTTCTGTTTACCACTGATGGAGCACATAAAACATTCCTGAAATGTGGGGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTTCCAAAGTCCACCGTaGTGTAGAGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRIFQSPP*CRGPAG
Trigger: CCCTGCAGGGCCTCTACACCACGGTGGACTTTGGAA...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR TCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCGTAGTGAATGCTTCCTaGGATGTAGCGAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSAVVNAS*DVAKWL
Trigger: CAGCCATTTCGCTACATCTCAGGAAGCATTCACTAC...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCACCACTGCTTCGGTCTTaGTTGTGGAGTGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSPLLRS*LWSEVG
Trigger: GCCAACCTCACTCCACAATCAAGACCGAAGCAGTGG...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGGATCATCACTGCTaGAGGGTGCCCACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLLDHHC*RVPTPV
Trigger: AACTGGAGTGGGCACCCTGCAGCAGTGATGATCCAG...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCAGTTCTGGATCATCACTaGTGCAGGGTGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSVLDHH*CRVPTP
Trigger: TGGAGTGGGCACCCTGCAGCAGTGATGATCCAGAAC...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGTATTCATTTTCAACCTaGACTGTTATAACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVYSFST*TVITGP
Trigger: AGGGCCAGTTATAACAGTGCAGGTTGAAAATGAATA...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp AAACAGAACCACATCATCCCCCAGATGGTGGCGAAAGCGCTTCTGCAGGAAGCGCACAGGCAAAGTAGCTaGCATATTCATTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: KQNHIIPQMVAKALLQEAHRQSS*HIHFQP
Trigger: AGGTTGAAAATGAATATGGCAGCTACTTTGCCTGTG...CGCTTCCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGATGTGGTTCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTAGGAGAGGCTTCATCTTaGGCAGAAGGACTCCCAACC +
Preference number: 4 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLGEASS*AEGLPT
Trigger: GGTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCC...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTAGGAGAGGCTTCATCTTaGGCAGAAGGACTCCCAACC +
Preference number: 4 (lower is better)
Translates to: ISTFQSVKCGMTGRICEVGEASS*AEGLPT
Trigger: GGTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCC...TACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGCACTGTTATAACTaGCCCTCCATTCTGATAGAG +
Preference number: 4 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSLHCYN*PSILIE
Trigger: CTCTATCAGAATGGAGGGCCAGTTATAACAGTGCAG...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGCCAGAAGGTCCAGAGTaGCTCCAGCTTTCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICEPEGPE*LQLSLL
Trigger: TAACAGGGAAAGCTGGAGCCACTCTGGACCTTCTGG...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCCAGAAGGTCCAGAGTaGCTCCAGCTTTCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: TTFKASIPALQICMHVTVPEGPE*LQLSLL
Trigger: TAACAGGGAAAGCTGGAGCCACTCTGGACCTTCTGG...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGTGGATAAAGGTGTCCTaGGGCAAGTCTGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: TTFKASIPALQICMHVTVWIKVS*GKSGIP
Trigger: TGGGATCCCAGACTTGCCCCAGGACACCTTTATCCA...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCCTCACACATTCCAGGTaGTCCCTGAAGGTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRILTHSR*SLKVGL
Trigger: AAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAG...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCACTCACACATTCCAGGTaGTCCCTGAAGGTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSLTHSR*SLKVGL
Trigger: AAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAG...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTATGGTCCTCAGAAAACTaGTACTGTCCTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLWSSEN*YCPGQG
Trigger: GCCCTGGCCAGGACAGTACCAGTTTTCTGAGGACCA...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGACATCATCCCCCAGATaGTGGCGAAAGCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLTSSPR*WRKRFC
Trigger: GCAGAAGCGCTTTCGCCACCATCTGGGGGATGATGT...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGATTTCAAACATCCTCTaGGTGGCATTCTCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLISNIL*VAFSSQ
Trigger: TTGAGACGAGAATGCCACCCAGAGGATGTTTGAAAT...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS-3UTR TCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCCTGTGCTGCATAGGGTaGGTTGGCCCCATTCCAATA +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRILCCIG*VGPIPI
Trigger: TATTGGAATGGGGCCAACTCACCCTATGCAGCACAG...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGCTGTGCTGCATAGGGTaGGTTGGCCCCATTCCAATA +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLLCCIG*VGPIPI
Trigger: TATTGGAATGGGGCCAACTCACCCTATGCAGCACAG...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCAAAATACTTCTCAGTaGGGTCCCCAGCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: TTFKASIPALQICMHVTVQNTSQ*GPQPHS
Trigger: TGAGTGAGGCTGGGGACCTCACTGAGAAGTATTTTG...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTAAGGGATAAAGGCTTTTaGTGGGCCCAGAGGGACACA +
Preference number: 4 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLRDKGF*WAQRDT
Trigger: TGTGTCCCTCTGGGCCCATCAAAAGCCTTTATCCCT...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCAGGGTTGCTGCAATCTTaGGGAAGTGTTGTCCGGTAC +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSGLLQS*GSVVRY
Trigger: GTACCGGACAACACTTCCTCAAGATTGCAGCAACCC...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp AGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCCTGTTATGTTCAGAGTaGTCACATTGTTTCGCTCAA +
Preference number: 4 (lower is better)
Translates to: SFHSSPADMYARYCAVSPLLCSE*SHCFAQ
Trigger: TTGAGCGAAACAATGTGATCACTCTGAACATAACAG...GGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp AGTATAGAATTCAGAATTGATCAAGGGTCCTTTGGGCTCACACTTCCTCTGGCTGAGGGAGGAAGCCACTaGTTCGGTCTTGATTGTGGA +
Preference number: 4 (lower is better)
Translates to: SIEFRIDQGSFGLTLPLAEGGSH*FGLDCG
Trigger: TCCACAATCAAGACCGAAGCAGTGGCTTCCTCCCTC...AGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAATTCTGAATTCTATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR GCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCAGAGGTCATCAGGATGTaGTGGGGCACAAACAAGGTC +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSEVIRM*WGTNKV
Trigger: GACCTTGTTTGTGCCCCAGCACATCCTGATGACCTC...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGATTTCAAACATCCTCTaGGTGGCATTGCGCAAGCCG +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICEISNIL*VALRKP
Trigger: CGGCTTGCGCAATGCCACCCAGAGGATGTTTGAAAT...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000307377.12
CDS-3UTR CCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTG +
Preference number: 4 (lower is better)
Translates to: TTFKASIPALQICMHVTVGSHFL*LRKASV
Trigger: CACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCC...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGGATAAAGGTGTCCTaGGGCAAGTCTGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: ISTFQSVKCGMTGRICEVWIKVS*GKSGIP
Trigger: TGGGATCCCAGACTTGCCCCAGGACACCTTTATCCA...TACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGGATAAAGGTGTCCTaGGGCAAGTCTGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLWIKVS*GKSGIP
Trigger: TGGGATCCCAGACTTGCCCCAGGACACCTTTATCCA...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCATTACAGATGGGGAAGTaGATCCAAGCGCAAAGGGCG +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSLQMGK*IQAQRA
Trigger: CGCCCTTTGCGCTTGGATCCACTTCCCCATCTGTAA...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS-3UTR TCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCACAAAATACTTCTCAGTaGGGTCCCCAGCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSQNTSQ*GPQPHS
Trigger: TGAGTGAGGCTGGGGACCTCACTGAGAAGTATTTTG...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGCAAAATACTTCTCAGTaGGGTCCCCAGCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLQNTSQ*GPQPHS
Trigger: TGAGTGAGGCTGGGGACCTCACTGAGAAGTATTTTG...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCTTTCAAACTTCTGGATaGTGTTTCGCAGAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLFQTSG*CFAEQN
Trigger: ATTTTGCTCTGCGAAACATCATCCAGAAGTTTGAAA...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp ATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTAAGCAGTCCCAGCTCATaGGCCAGCCGAAGAAAATAT +
Preference number: 4 (lower is better)
Translates to: ISTFQSVKCGMTGRICEVSSPSS*ASRRKY
Trigger: ATATTTTCTTCGGCTGGCTCATGAGCTGGGACTGCT...TACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR TCA 90 bp GAATTGATCAAGGGTCCTTTGGGCTCACACTTCCTCTGGCTTAGGAAAGCATCTTTAGGAAAGCATCTGTaGTGTTGCTGCCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: ELIKGPLGSHFLWLRKASLGKHL*CCCLFQ
Trigger: TTGGAACAGGCAGCAACATCACAGATGCTTTCCTAA...AGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR GCA 90 bp CTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCAAAGTAGCTGCCATATTCATTCACGGGAGTAGTGAATaGTTCCTGAGATGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: LQEAQVVKITGKVAAIFIHGSSE*FLRCSE
Trigger: TTCGCTACATCTCAGGAAGCATTCACTACTCCCGTG...AATGAATATGGCAGCTACTTTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446732.5
CDS-3UTR GCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCAGAGAGGTGCTGGGTTaGTGCAATCTTGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRIREVLG*CNLEEV
Trigger: CACTTCCTCAAGATTGCAGCAACCCAGCACCTCTCT...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGGTATGCACGTTACTGTaGTGTCAGCCCCTCACACAT +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLVCTLL*CQPLTH
Trigger: ATGTGTGAGGGGCTGACAGCACAGTAACGTGCATAC...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp AGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTATTCATTTTCAACCTaGACTGTTATAACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SFHSSPADMYARYCAVSPYSFST*TVITGP
Trigger: AGGGCCAGTTATAACAGTGCAGGTTGAAAATGAATA...GGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCAGGAATGTTTTATGTaGTCCATCAGTGGTAAACAG +
Preference number: 4 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSQECFM*SISGKQ
Trigger: CTGTTTACCACTGATGGAGCACATAAAACATTCCTG...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCAATTTCAAACATCCTCTaGGTGGCATTGCGCAAGCCG +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSISNIL*VALRKP
Trigger: CGGCTTGCGCAATGCCACCCAGAGGATGTTTGAAAT...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000307377.12
CDS-3UTR CCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCTGCCAGGTAATGTCTaGATGGCGTTCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMLPGNV*MAFSPA
Trigger: GGCTGGGCTGAACGCCATCCAGACATTACCTGGCAG...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000307377.12
CDS-3UTR CCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCCTGCATAGGGTGAGTTaGCCCCATTCCAATAGGCAA +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRILHRVS*PHSNRQ
Trigger: TTGCCTATTGGAATGGGGCCAACTCACCCTATGCAG...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCACTGCATAGGGTGAGTTaGCCCCATTCCAATAGGCAA +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSLHRVS*PHSNRQ
Trigger: TTGCCTATTGGAATGGGGCCAACTCACCCTATGCAG...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTACTTTTTCAAACTTCTaGATGATGTTTCGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPTFSNF*MMFRRA
Trigger: TGCTCTGCGAAACATCATCCAGAAGTTTGAAAAAGT...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGACATATGCTCGATCGTaGACTCCATTGAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: TTFKASIPALQICMHVTVTYARS*TPLRGE
Trigger: TTCACCCCTCAATGGAGTCCACGATCGAGCATATGT...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTTTTCATCATCATACATaGTCCAGCCATGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: ASIPALQICMHVTVLSAPFHHHT*SSHESL
Trigger: CAAAGATTCATGGCTGGACCATGTATGATGATGAAA...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTTAGGAAAGCATCTGTaGTGTTGCTGCCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLLGKHL*CCCLHC
Trigger: ACAGTGCAGGCAGCAACATCACAGATGCTTTCCTAA...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307377.12
CDS-3UTR TCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGTTAGGAAAGCATCTGTaGTGTTGCTGCCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICELGKHL*CCCLFQ
Trigger: TTGGAACAGGCAGCAACATCACAGATGCTTTCCTAA...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCCACGGGAGTAGTGAATaGTTCCTGAGATGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRIHGSSE*FLRCSE
Trigger: TTCGCTACATCTCAGGAAGCATTCACTACTCCCGTG...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCATAGTCGTAGCTGGTaGGCTGTGCTGCATAGGGTG +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMHSRSW*AVLHRV
Trigger: CACCCTATGCAGCACAGCCCACCAGCTACGACTATG...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCACTTTTTCAAACTTCTaGATGATGTTTCGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPTFSNF*MMFRRA
Trigger: TGCTCTGCGAAACATCATCCAGAAGTTTGAAAAAGT...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCACATATGCTCGATCGTaGACTCCATTGAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SFSISTFQSVKCGMTGRITYARS*TPLRGE
Trigger: TTCACCCCTCAATGGAGTCCACGATCGAGCATATGT...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCAACATATGCTCGATCGTaGACTCCATTGAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSTYARS*TPLRGE
Trigger: TTCACCCCTCAATGGAGTCCACGATCGAGCATATGT...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGGTGATGGTGTTTaGGGCCGAGGTCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMHGDGV*GRGHQD
Trigger: ATCCTGATGACCTCGGCCCCAAACACCATCACCGTG...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTAAAACTGGTACTGTCCTaGCCAGGGCTCATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLKLVLS*PGLMKV
Trigger: AACTTTCATGAGCCCTGGCCAGGACAGTACCAGTTT...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp CCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTTTCAAGTTAGTGAAGTaGTTTATTCAGCCCACTCAA +
Preference number: 4 (lower is better)
Translates to: PADMYARYCAVSPSHIPGFKLVK*FIQPTQ
Trigger: TTGAGTGGGCTGAATAAACCACTTCACTAACTTGAA...ACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR TCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCTGTGCTGCATAGGGTaGGTTGGCCCCATTCCAATA +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMLCCIG*VGPIPI
Trigger: TATTGGAATGGGGCCAACTCACCCTATGCAGCACAG...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCTTTCAAACTTCTGGATaGTGTTTCGCAGAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSAFQTSG*CFAEQN
Trigger: ATTTTGCTCTGCGAAACATCATCCAGAAGTTTGAAA...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGAGGGATAAAGGCTTTTaGTGGGCCCAGAGGGACACA +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMRDKGF*WAQRDT
Trigger: TGTGTCCCTCTGGGCCCATCAAAAGCCTTTATCCCT...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTTAGGAAAGCATCTGTaGTGTTGCTGCCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLLGKHL*CCCLFQ
Trigger: TTGGAACAGGCAGCAACATCACAGATGCTTTCCTAA...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCAATCCACAGCAACATATaGTCGATCGTGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSIHSNI*SIVDSI
Trigger: AATGGAGTCCACGATCGAGCATATGTTGCTGTGGAT...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGGAGGTCATCAGGATGTaGTGGGGCACAAACAAGGTC +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMEVIRM*WGTNKV
Trigger: GACCTTGTTTGTGCCCCAGCACATCCTGATGACCTC...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGTTGGCACTGCAGGGATaGAGGGAAACCTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMLALQG*RETSGE
Trigger: TTCACCTGAGGTTTCCCTGCATCCCTGCAGTGCCAA...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp TCACACTTCCTCTGGCTTAGGAAAGCATCTGTGATGTTGCTGCCTGTTCCAAAGCAGGAATGTTTTATGTaGTCCATCAGTGGTAAACAG +
Preference number: 4 (lower is better)
Translates to: SHFLWLRKASVMLLPVPKQECFM*SISGKQ
Trigger: CTGTTTACCACTGATGGAGCACATAAAACATTCCTG...CTTTGGAACAGGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCATCATAGTCGTAGCTaGTGGGCTGTGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMHHSRS*WAVLHR
Trigger: CCTATGCAGCACAGCCCACCAGCTACGACTATGATG...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCAAATATTCCACATCATaGTCCTCAGAAAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: KASIPALQICMHVTVLSAKYSTS*SSENWY
Trigger: GTACCAGTTTTCTGAGGACCATGATGTGGAATATTT...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp CTTCTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCAAAGTAGCTGCCATATTCTATTCATTTTCAACCTaGACTGTTATAACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLQEAQVVKITGKVAAIFYSFST*TVITGP
Trigger: AGGGCCAGTTATAACAGTGCAGGTTGAAAATGAATA...GAATATGGCAGCTACTTTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR GCA 90 bp TCACACTTCCTCTGGCTTAGGAAAGCATCTGTGATGTTGCTGCCTGTTCCAAAGTATTCATTTTCAACCTaGACTGTTATAACTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SHFLWLRKASVMLLPVPKYSFST*TVITGP
Trigger: AGGGCCAGTTATAACAGTGCAGGTTGAAAATGAATA...CTTTGGAACAGGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR GCA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGCACAGGCAAAGTAGCTaGCATATTCATTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: SISTFQSVKCGMTGRICEHRQSS*HIHFQP
Trigger: AGGTTGAAAATGAATATGGCAGCTACTTTGCCTGTG...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp CTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCAAAGTAGCTGCCATATTCATTCACAGGCAAAGTAGCTaGCATATTCATTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: LQEAQVVKITGKVAAIFIHRQSS*HIHFQP
Trigger: AGGTTGAAAATGAATATGGCAGCTACTTTGCCTGTG...AATGAATATGGCAGCTACTTTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR TCA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGCTGTTATGTTCAGAGTaGTCACATTGTTTCGCTCAA +
Preference number: 4 (lower is better)
Translates to: LFHFHIPISEMWHDREDLLLCSE*SHCFAQ
Trigger: TTGAGCGAAACAATGTGATCACTCTGAACATAACAG...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGGGAGTAGTGAATaGTTCCTGAGATGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMHGSSE*FLRCSE
Trigger: TTCGCTACATCTCAGGAAGCATTCACTACTCCCGTG...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR GCA 90 bp ATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTACAGGAATGTTTTATGTaGTCCATCAGTGGTAAACAG +
Preference number: 4 (lower is better)
Translates to: ISTFQSVKCGMTGRICEVQECFM*SISGKQ
Trigger: CTGTTTACCACTGATGGAGCACATAAAACATTCCTG...TACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGAAACTTTGGTGTAGATaGAGGGATAGGACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMKLWCR*RDRTFW
Trigger: CCAGAAGGTCCTATCCCTCCATCTACACCAAAGTTT...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTAAAATATTCCACATCATaGTCCTCAGAAAACTGGTAC +
Preference number: 4 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLKYSTS*SSENWY
Trigger: GTACCAGTTTTCTGAGGACCATGATGTGGAATATTT...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR GCA 90 bp CCACATTTCAGGAATGTTTTATGTGCTCCATCAGTGGTAAACAGAACCACATCACAGGAATGTTTTATGTaGTCCATCAGTGGTAAACAG +
Preference number: 4 (lower is better)
Translates to: PHFRNVLCAPSVVNRTTSQECFM*SISGKQ
Trigger: CTGTTTACCACTGATGGAGCACATAAAACATTCCTG...TGATGTGGTTCTGTTTACCACTGATGGAGCACATAAAACATTCCTGAAATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGTCCATATGCAAACTTTaGTGTAGATGGAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMSICKL*CRWRDR
Trigger: CCTATCCCTCCATCTACACCAAAGTTTGCATATGGA...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR TCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCTGTTATGTTCAGAGTaGTCACATTGTTTCGCTCAA +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMLLCSE*SHCFAQ
Trigger: TTGAGCGAAACAATGTGATCACTCTGAACATAACAG...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CCA 90 bp ATAAAAATCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGTTTCATCATCATACATaGTCCAGCCATGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: IKITTTFKASIPALQICMFHHHT*SSHESL
Trigger: CAAAGATTCATGGCTGGACCATGTATGATGATGAAA...CATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGATTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS TCA 90 bp CTGGATCATCACTGCTGCAGGGTGCCCACTCCAGTTCCAGCACGGTaGTGGTGTTTGGGGCCGAGGTCATCAGGATGTGCTGGGGCACAA +
Preference number: 5 (lower is better)
Translates to: LDHHCCRVPTPVPAR*WCLGPRSSGCAGAQ
Trigger: TTGTGCCCCAGCACATCCTGATGACCTCGGCCCCAAACACCATCACCGTGCTGGAACTGGAGTGGGCACCCTGCAGCAGTGATGATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS CCA 90 bp TCTGGGTGGCATTCTCGTCTCAACACCTCGTTACAGATGGGGAAGTaGATCCAAGCGCAAAGGGCGGCCGGAGCGGAACGCACAAGCGAC +
Preference number: 5 (lower is better)
Translates to: SGWHSRLNTSLQMGK*IQAQRAAGAERTSD
Trigger: GTCGCTTGTGCGTTCCGCTCCGGCCGCCCTTTGCGCTTGGATCCACTTCCCCATCTGTAACGAGGTGTTGAGACGAGAATGCCACCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS CCA 90 bp CCCTGCCAAGCCTTGGTCAAGGGTCCTTTGGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTGATGTTGCTGCGCGCAAGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: PCQALVKGPLGSHFL*LRKASVMLLRASRA
Trigger: CGCGCGGCTTGCGCGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGACCAAGGCTTGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498537.5
CDS CCA 90 bp ACTGCTGCAGGGTGCCCACTCCAGTTCCAGCACGGTGATGGTGTTTaGGGCCGAGGTCATCAGGATGTGCTGGGGCACAAACAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: TAAGCPLQFQHGDGV*GRGHQDVLGHKQGQ
Trigger: TTGACCTTGTTTGTGCCCCAGCACATCCTGATGACCTCGGCCCCAAACACCATCACCGTGCTGGAACTGGAGTGGGCACCCTGCAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS CCA 90 bp AGCCCAAGGAAGGAATCGAGACTCGTCTCAACACCTCGTTACAGATaGGGAAGTGGATCCAAGCGCAAAGGGCGGCCGGAGCGGAACGCA +
Preference number: 5 (lower is better)
Translates to: SPRKESRLVSTPRYR*GSGSKRKGRPERNA
Trigger: TGCGTTCCGCTCCGGCCGCCCTTTGCGCTTGGATCCACTTCCCCATCTGTAACGAGGTGTTGAGACGAGTCTCGATTCCTTCCTTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450835.1
CDS CCA 90 bp AAACATCCTCTGGGTGGCATTCTCGTCTCAACACCTCGTTACAGATaGGGAAGTGGATCCAAGCGCAAAGGGCGGCCGGAGCGGAACGCA +
Preference number: 5 (lower is better)
Translates to: KHPLGGILVSTPRYR*GSGSKRKGRPERNA
Trigger: TGCGTTCCGCTCCGGCCGCCCTTTGCGCTTGGATCCACTTCCCCATCTGTAACGAGGTGTTGAGACGAGAATGCCACCCAGAGGATGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS-3UTR CAA 90 bp CCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTATCCTCTGGGTGGCATaGCGCAAGCCGCGCGTAGGG +
Preference number: 5 (lower is better)
Translates to: PADMYARYCAVSPSHIPGILWVA*RKPRVG
Trigger: CCCTACGCGCGGCTTGCGCAATGCCACCCAGAGGAT...ACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000307377.12
CDS-3UTR CAA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGTTGATCAAGGGTCCTTaGGGCTCACACTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWLIKGP*GSHFLW
Trigger: CCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAA...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS TCA 90 bp GTCCTTCCAGTAGAAGCGGGGCACACGGGAGTAGTGAATGCTTCCTaGGATGTAGCGAAATGGCTGGCCATCCTTGAGGAAGGAGTCCCG +
Preference number: 5 (lower is better)
Translates to: VLPVEAGHTGVVNAS*DVAKWLAILEEGVP
Trigger: CGGGACTCCTTCCTCAAGGATGGCCAGCCATTTCGCTACATCTCAGGAAGCATTCACTACTCCCGTGTGCCCCGCTTCTACTGGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000436768.1
ENST00000446732.5
ENST00000450835.1
ENST00000464355.1
CDS CCA 90 bp AGGACTCCCTGGGGGATCCCATCCACAGCAACATATGCTCGATCGTaGACTCCATTGAGGGGTGAAGAGAGAGGTGCTGGGTTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: RTPWGIPSTATYARS*TPLRGEERGAGLLQ
Trigger: TTGCAGCAACCCAGCACCTCTCTCTTCACCCCTCAATGGAGTCCACGATCGAGCATATGTTGCTGTGGATGGGATCCCCCAGGGAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS-3UTR CAA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGAGGAGAGGCTTCATCTaGGGCAGAAGGACTCCCAAC +
Preference number: 5 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVRRGFI*GRRTPN
Trigger: GTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCCT...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp GTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGCATGGGTTGCTGCAATCTaGAGGAAGTGTTGTCCGGTA +
Preference number: 5 (lower is better)
Translates to: VLSAPHTFQVVPEGGALAWVAAI*RKCCPV
Trigger: TACCGGACAACACTTCCTCAAGATTGCAGCAACCCA...TGCCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGCGATCGTGGACTCCATaGAGGGGTGAAGAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVRSWTP*RGEERG
Trigger: ACCTCTCTCTTCACCCCTCAATGGAGTCCACGATCG...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp ATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTATCCAGACCTGGCCCTaGGTCCATCCAGGAAACTGG +
Preference number: 5 (lower is better)
Translates to: MHVTVLSAPHTFQVVPEGIQTWP*VHPGNW
Trigger: CCAGTTTCCTGGATGGACCAAGGGCCAGGTCTGGAT...ACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAATGGCTGGCCATCCTaGAGGAAGGAGTCCCGGCTA +
Preference number: 5 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLNGWPS*RKESRL
Trigger: TAGCCGGGACTCCTTCCTCAAGGATGGCCAGCCATT...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp ATCTGTGATGTTGCTGCCTGTTCCAAAGTCCACCGTGGTGTAGAGGCCCTGCAGAGGAGAGGCTTCATCTaGGGCAGAAGGACTCCCAAC +
Preference number: 5 (lower is better)
Translates to: ICDVAACSKVHRGVEALQRRGFI*GRRTPN
Trigger: GTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCCT...CTGCAGGGCCTCTACACCACGGTGGACTTTGGAACAGGCAGCAACATCACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CAA 90 bp CTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGGGGCTTTGGAATCTTGAGGAAGTGTaGTCCGGTACAGCACAAACC +
Preference number: 5 (lower is better)
Translates to: LCCQPLTHSRWSLKVGLWNLEEV*SGTAQT
Trigger: GGTTTGTGCTGTACCGGACAACACTTCCTCAAGATT...CCAAAGCCCCACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS TCA 90 bp GGGGGATCCCATCCACAGCAACATATGCTCGATCGTGGACTCCATTaGGGGGTGAAGAGAGAGGTGCTGGGTTGCTGCAATCTTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GGSHPQQHMLDRGLH*GVKREVLGCCNLEE
Trigger: TTCCTCAAGATTGCAGCAACCCAGCACCTCTCTCTTCACCCCTCAATGGAGTCCACGATCGAGCATATGTTGCTGTGGATGGGATCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS CCA 90 bp TGGGAATGGAGAAGTTCCCCATATAAAAGGCCGGGAGCGTGTAGTTaGATGAGTTGTGGGCCCAGGCTTCATCATGGTGGCCACTGTCAC +
Preference number: 5 (lower is better)
Translates to: WEWRSSPYKRPGACS*MSCGPRLHHGGHCH
Trigger: GTGACAGTGGCCACCATGATGAAGCCTGGGCCCACAACTCATCCAACTACACGCTCCCGGCCTTTTATATGGGGAACTTCTCCATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
CDS-3UTR CAA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCAATGGCTGGCCATCCTaGAGGAAGGAGTCCCGGCTA +
Preference number: 5 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPNGWPS*RKESRL
Trigger: TAGCCGGGACTCCTTCCTCAAGGATGGCCAGCCATT...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp TGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGAAGGTGTGGGTTGCTGCAATCTaGAGGAAGTGTTGTCCGGTA +
Preference number: 5 (lower is better)
Translates to: CTLLCCQPLTHSRWSLKVWVAAI*RKCCPV
Trigger: TACCGGACAACACTTCCTCAAGATTGCAGCAACCCA...CACCTTCAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCATCCAGACCTGGCCCTaGGTCCATCCAGGAAACTGG +
Preference number: 5 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPIQTWP*VHPGNW
Trigger: CCAGTTTCCTGGATGGACCAAGGGCCAGGTCTGGAT...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS TCA 90 bp CCAGAAGGTCCAGAGTGGCTCCAGCTTTCCCTGTTATGTTCAGAGTaGTCACATTGTTTCGCTCAAGGACTCCCTGGGGGATCCCATCCA +
Preference number: 5 (lower is better)
Translates to: PEGPEWLQLSLLCSE*SHCFAQGLPGGSHP
Trigger: TGGATGGGATCCCCCAGGGAGTCCTTGAGCGAAACAATGTGATCACTCTGAACATAACAGGGAAAGCTGGAGCCACTCTGGACCTTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS-3UTR CAA 90 bp ATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTAATCCTCTGGGTGGCATaGCGCAAGCCGCGCGTAGGG +
Preference number: 5 (lower is better)
Translates to: ISTFQSVKCGMTGRICEVILWVA*RKPRVG
Trigger: CCCTACGCGCGGCTTGCGCAATGCCACCCAGAGGAT...TACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000307377.12
CDS-3UTR CAA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCAGGAGAGGCTTCATCTaGGGCAGAAGGACTCCCAAC +
Preference number: 5 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPRRGFI*GRRTPN
Trigger: GTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCCT...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp GGCGAAAGCGCTTCTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCAAAGTAGCTTGATCAAGGGTCCTTaGGGCTCACACTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: GESASAGSAGSQNHRQSSLIKGP*GSHFLW
Trigger: CCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAA...GCTACTTTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAGAAGCGCTTTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS TCA 90 bp CCCATCCACAGCAACATATGCTCGATCGTGGACTCCATTGAGGGGTaGAGAGAGAGGTGCTGGGTTGCTGCAATCTTGAGGAAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: PIHSNICSIVDSIEG*RERCWVAAILRKCC
Trigger: ACAACACTTCCTCAAGATTGCAGCAACCCAGCACCTCTCTCTTCACCCCTCAATGGAGTCCACGATCGAGCATATGTTGCTGTGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS-3UTR CAA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCTTGATCAAGGGTCCTTaGGGCTCACACTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSLIKGP*GSHFLW
Trigger: CCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAA...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp GCGAAAGCGCTTCTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCAAAGTAGCTTTGATCAAGGGTCCTTaGGGCTCACACTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: AKALLQEAQVVKITGKVALIKGP*GSHFLW
Trigger: CCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAA...AGCTACTTTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAGAAGCGCTTTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CAA 90 bp ATCATCCCCCAGATGGTGGCGAAAGCGCTTCTGCAGGAAGCGCAGGTAGTCAAAAAAGCATCTGTGATGTaGCTGCCTGTTCCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: IIPQMVAKALLQEAQVVKKASVM*LPVPKS
Trigger: GGACTTTGGAACAGGCAGCAACATCACAGATGCTTT...TTTGACTACCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATCTGGGGGATGAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS CCA 90 bp TCCCAGTATTCTGCAAAGCAGGCCTCAAACACTTCATGTTTTTCTTaGGCATTGCCCTGCCAAGCCTTGGTCAAGGGTCCTTTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SQYSAKQASNTSCFS*ALPCQALVKGPLGS
Trigger: TGAGCCCAAAGGACCCTTGACCAAGGCTTGGCAGGGCAATGCCCAAGAAAAACATGAAGTGTTTGAGGCCTGCTTTGCAGAATACTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498537.5
CDS-3UTR CAA 90 bp GAATTGATCAAGGGTCCTTTGGGCTCACACTTCCTCTGGCTTAGGAAAGCATCTAGGAGAGGCTTCATCTaGGGCAGAAGGACTCCCAAC +
Preference number: 5 (lower is better)
Translates to: ELIKGPLGSHFLWLRKASRRGFI*GRRTPN
Trigger: GTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCCT...AGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CAA 90 bp AAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCTTGATCAAGGGTCCTTaGGGCTCACACTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: KASIPALQICMHVTVLSALIKGP*GSHFLW
Trigger: CCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAA...GGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp AGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCTGGGTTGCTGCAATCTaGAGGAAGTGTTGTCCGGTA +
Preference number: 5 (lower is better)
Translates to: RYVCTLLCCQPLTHSRWSWVAAI*RKCCPV
Trigger: TACCGGACAACACTTCCTCAAGATTGCAGCAACCCA...GGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGTTCAGAGTGATCACATaGTTTCGCTCAAGGACTCCC +
Preference number: 5 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLFRVIT*FRSRTP
Trigger: GGGAGTCCTTGAGCGAAACAATGTGATCACTCTGAA...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp CTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCTTCAGAGTGATCACATaGTTTCGCTCAAGGACTCCC +
Preference number: 5 (lower is better)
Translates to: LPFQPCRYVCTLLCCQPLFRVIT*FRSRTP
Trigger: GGGAGTCCTTGAGCGAAACAATGTGATCACTCTGAA...GAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp TATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTGGTCCCTGCAGTCCGTGAGGATATaGGAACTGAGAGTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: YVCTLLCCQPLTHSRWSLQSVRI*ELRVRL
Trigger: TAACCTGACTCTCAGTTCCAATATCCTCACGGACTG...CAGGGACCACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp GCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTAAAGCATCTGTGATGTaGCTGCCTGTTCCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: ASIPALQICMHVTVLSAPKASVM*LPVPKS
Trigger: GGACTTTGGAACAGGCAGCAACATCACAGATGCTTT...AGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS-3UTR CAA 90 bp GATGGTGGCGAAAGCGCTTCTGCAGGAAGCGCAGGTAGTCAAAATCACAGGCAAAAAGCATCTGTGATGTaGCTGCCTGTTCCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: DGGESASAGSAGSQNHRQKASVM*LPVPKS
Trigger: GGACTTTGGAACAGGCAGCAACATCACAGATGCTTT...TTGCCTGTGATTTTGACTACCTGCGCTTCCTGCAGAAGCGCTTTCGCCACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438227.1
ENST00000446732.5
CDS-3UTR CAA 90 bp CTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGAATGGCTGGCCATCCTaGAGGAAGGAGTCCCGGCTA +
Preference number: 5 (lower is better)
Translates to: LFHFHIPISEMWHDREDLNGWPS*RKESRL
Trigger: TAGCCGGGACTCCTTCCTCAAGGATGGCCAGCCATT...CAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp TCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGAGGAGAGGCTTCATCTaGGGCAGAAGGACTCCCAAC +
Preference number: 5 (lower is better)
Translates to: SISTFQSVKCGMTGRICERRGFI*GRRTPN
Trigger: GTTGGGAGTCCTTCTGCCCAAGATGAAGCCTCTCCT...CTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp AAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCAGTCCGTGAGGATATaGGAACTGAGAGTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: KLPFQPCRYVCTLLCCQPQSVRI*ELRVRL
Trigger: TAACCTGACTCTCAGTTCCAATATCCTCACGGACTG...GGGCTGACAGCACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp ACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTATGTTCAATCCAGACCTGGCCCTaGGTCCATCCAGGAAACTGG +
Preference number: 5 (lower is better)
Translates to: TFQSVKCGMTGRICEVCSIQTWP*VHPGNW
Trigger: CCAGTTTCCTGGATGGACCAAGGGCCAGGTCTGGAT...TGAACATACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp CCTGCAGATATGTATGCACGTTACTGTGCTGTCAGCCCCTCACACATTCCAGGTAAAGCATCTGTGATGTaGCTGCCTGTTCCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: PADMYARYCAVSPSHIPGKASVM*LPVPKS
Trigger: GGACTTTGGAACAGGCAGCAACATCACAGATGCTTT...ACCTGGAATGTGTGAGGGGCTGACAGCACAGTAACGTGCATACATATCTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307363.10
ENST00000399402.7
CDS TCA 90 bp AGTAGTGAATGCTTCCTGAGATGTAGCGAAATGGCTGGCCATCCTTaGGGAAGGAGTCCCGGCTATAGTCAATTTCAAACATCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: SSECFLRCSEMAGHP*GRSPGYSQFQTSSG
Trigger: CCCAGAGGATGTTTGAAATTGACTATAGCCGGGACTCCTTCCTCAAGGATGGCCAGCCATTTCGCTACATCTCAGGAAGCATTCACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000436768.1
ENST00000446732.5
ENST00000450835.1
ENST00000464355.1
CDS-3UTR CAA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCCGATCGTGGACTCCATaGAGGGGTGAAGAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: SFSISTFQSVKCGMTGRIRSWTP*RGEERG
Trigger: ACCTCTCTCTTCACCCCTCAATGGAGTCCACGATCG...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp ACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTACTGTGAATCTTGAGGAAGTGTaGTCCGGTACAGCACAAACC +
Preference number: 5 (lower is better)
Translates to: TTFKASIPALQICMHVTVNLEEV*SGTAQT
Trigger: GGTTTGTGCTGTACCGGACAACACTTCCTCAAGATT...CACAGTAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS TCA 90 bp TTCATTTACCTGGGATCTGATGCATTTGCTTACCATTTTGGCCCCTaGATTCAGAATGGGCACTGCAAGGCAGTGCAGAAAGCACACTTT +
Preference number: 5 (lower is better)
Translates to: FIYLGSDAFAYHFGP*IQNGHCKAVQKAHF
Trigger: AAAGTGTGCTTTCTGCACTGCCTTGCAGTGCCCATTCTGAATTCAGGGGCCAAAATGGTAAGCAAATGCATCAGATCCCAGGTAAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473477.1
CDS-3UTR CAA 90 bp TCCTTTTCCATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCAATCTTGAGGAAGTGTaGTCCGGTACAGCACAAACC +
Preference number: 5 (lower is better)
Translates to: SFSISTFQSVKCGMTGRINLEEV*SGTAQT
Trigger: GGTTTGTGCTGTACCGGACAACACTTCCTCAAGATT...GATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAATGGAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp TCACTACCACCTTTAAAGCTTCCATTCCAGCCCTGCAGATATGTATGCACGTTATTCAGAGTGATCACATaGTTTCGCTCAAGGACTCCC +
Preference number: 5 (lower is better)
Translates to: SLPPLKLPFQPCRYVCTLFRVIT*FRSRTP
Trigger: GGGAGTCCTTGAGCGAAACAATGTGATCACTCTGAA...TAACGTGCATACATATCTGCAGGGCTGGAATGGAAGCTTTAAAGGTGGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS-3UTR CAA 90 bp ATTTCCACATTCCAATCAGTGAAATGTGGCATGACAGGGAGGATCTGTGAGGTACAGTCCGTGAGGATATaGGAACTGAGAGTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: ISTFQSVKCGMTGRICEVQSVRI*ELRVRL
Trigger: TAACCTGACTCTCAGTTCCAATATCCTCACGGACTG...TACCTCACAGATCCTCCCTGTCATGCCACATTTCACTGATTGGAATGTGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS CCA 90 bp GCACTTCAAGCTAAAGAGAGCCTGGAAATTCATGGTTCATTTACCTaGGATCTGATGCATTTGCTTACCATTTTGGCCCCTGAATTCAGA +
Preference number: 5 (lower is better)
Translates to: ALQAKESLEIHGSFT*DLMHLLTILAPEFR
Trigger: TCTGAATTCAGGGGCCAAAATGGTAAGCAAATGCATCAGATCCCAGGTAAATGAACCATGAATTTCCAGGCTCTCTTTAGCTTGAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473477.1
CDS TCA 90 bp GGAATCCCAGAATCCACTCCAATTATCAAGGTCCTCACTACCACTTaGTTAATTTCTACAGTGACCCATTTCCAAAACATCAGCGGAACT +
Preference number: 5 (lower is better)
Translates to: GIPESTPIIKVLTTT*LISTVTHFQNISGT
Trigger: AGTTCCGCTGATGTTTTGGAAATGGGTCACTGTAGAAATTAATCAAGTGGTAGTGAGGACCTTGATAATTGGAGTGGATTCTGGGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481581.1
CDS TCA 90 bp TTCAGAATTGATCTTTGTATGAATCCAGATTTTCAGATCTCAGGTTaGTTTATAACGAGGAAGGCTTGTCCCAGTATTCTGCAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: FRIDLCMNPDFQISG*FITRKACPSILQSR
Trigger: CCTGCTTTGCAGAATACTGGGACAAGCCTTCCTCGTTATAAATCAACCTGAGATCTGAAAATCTGGATTCATACAAAGATCAATTCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498537.5
CDS TCA 72 bp TGCAGTCGGCGCCCAGGCCGGCCGCTTCGCGTCACTTaGCTAAGGACCCACGGCCTGGCACCGCCCCTCGTC +
Preference number: 6 (lower is better)
Translates to: CSRRPGRPLRVT*LRTHGLAPPLV
Trigger: GACGAGGGGCGGTGCCAGGCCGTGGGTCCTTAGTCAAGTGACGCGAAGCGGCCGGCCTGGGCGCCGACTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436768.1
CDS CAA 72 bp CTGCAGTCGGCGCCCAGGCCGGCCGCTTCGCGTCACTaGACTAAGGACCCACGGCCTGGCACCGCCCCTCGT +
Preference number: 6 (lower is better)
Translates to: LQSAPRPAASRH*TKDPRPGTAPR
Trigger: ACGAGGGGCGGTGCCAGGCCGTGGGTCCTTAGTCAAGTGACGCGAAGCGGCCGGCCTGGGCGCCGACTGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436768.1
CDS TCA 72 bp CACTGCTGCAGGGTGCCCACTCCAGTTCCAGCACGGTaGTGGTGTTTGGGGCCGAGGTCATCAGGATGTGCT +
Preference number: 6 (lower is better)
Translates to: HCCRVPTPVPAR*WCLGPRSSGCA
Trigger: AGCACATCCTGATGACCTCGGCCCCAAACACCATCACCGTGCTGGAACTGGAGTGGGCACCCTGCAGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS CCA 72 bp GGGTGCCCACTCCAGTTCCAGCACGGTGATGGTGTTTaGGGCCGAGGTCATCAGGATGTGCTGGGGCACAAA +
Preference number: 6 (lower is better)
Translates to: GCPLQFQHGDGV*GRGHQDVLGHK
Trigger: TTTGTGCCCCAGCACATCCTGATGACCTCGGCCCCAAACACCATCACCGTGCTGGAACTGGAGTGGGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS CCA 72 bp GAGACTCGTCTCAACACCTCGTTACAGATGGGGAAGTaGATCCAAGCGCAAAGGGCGGCCGGAGCGGAACGC +
Preference number: 6 (lower is better)
Translates to: ETRLNTSLQMGK*IQAQRAAGAER
Trigger: GCGTTCCGCTCCGGCCGCCCTTTGCGCTTGGATCCACTTCCCCATCTGTAACGAGGTGTTGAGACGAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450835.1
CDS CCA 72 bp CAGCCTCACTCAGTGGGGCATCATAGTCGTAGCTGGTaGGCTGTGCTGCATAGGGTGAGTTGGCCCCATTCC +
Preference number: 6 (lower is better)
Translates to: QPHSVGHHSRSW*AVLHRVSWPHS
Trigger: GGAATGGGGCCAACTCACCCTATGCAGCACAGCCCACCAGCTACGACTATGATGCCCCACTGAGTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000415454.1
ENST00000482097.5
ENST00000485698.5
ENST00000498537.5
CDS CCA 72 bp CATTCTCGTCTCAACACCTCGTTACAGATGGGGAAGTaGATCCAAGCGCAAAGGGCGGCCGGAGCGGAACGC +
Preference number: 6 (lower is better)
Translates to: HSRLNTSLQMGK*IQAQRAAGAER
Trigger: GCGTTCCGCTCCGGCCGCCCTTTGCGCTTGGATCCACTTCCCCATCTGTAACGAGGTGTTGAGACGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS CCA 72 bp CTGGGTGGCATTCTCGTCTCAACACCTCGTTACAGATaGGGAAGTGGATCCAAGCGCAAAGGGCGGCCGGAG +
Preference number: 6 (lower is better)
Translates to: LGGILVSTPRYR*GSGSKRKGRPE
Trigger: CTCCGGCCGCCCTTTGCGCTTGGATCCACTTCCCCATCTGTAACGAGGTGTTGAGACGAGAATGCCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399402.7
CDS TCA 72 bp TCCTCAGAAAACTGGTACTGTCCTGGCCAGGGCTCATaGAAGTTCCAGGGCACATACGCGCAAGCCGCGCGT +
Preference number: 6 (lower is better)
Translates to: SSENWYCPGQGS*KFQGTYAQAAR
Trigger: ACGCGCGGCTTGCGCGTATGTGCCCTGGAACTTTCATGAGCCCTGGCCAGGACAGTACCAGTTTTCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440656.1
CDS TCA 72 bp GGCCCGGGCCTCAGGATAACCAGCAGTCCCAGCTCATaGGCCAGCCGAAGAAAATATTCCACATCATGGTCC +
Preference number: 6 (lower is better)
Translates to: GPGLRITSSPSS*ASRRKYSTSWS
Trigger: GGACCATGATGTGGAATATTTTCTTCGGCTGGCTCATGAGCTGGGACTGCTGGTTATCCTGAGGCCCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307363.10
ENST00000399402.7
ENST00000440656.1
ENST00000450835.1
ENST00000464355.1
CDS CCA 72 bp TGGGGGATCCCATCCACAGCAACATATGCTCGATCGTaGACTCCATTGAGGGGTGAAGAGAGAGGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: WGIPSTATYARS*TPLRGEERGAG
Trigger: CCCAGCACCTCTCTCTTCACCCCTCAATGGAGTCCACGATCGAGCATATGTTGCTGTGGATGGGATCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS CCA 72 bp CTGGGGCACAAACAAGGTCAACTGAGGGCCCCGGGCTaGCCAATAGCGGCCAAGGTTAAAGCCATTAATCCA +
Preference number: 6 (lower is better)
Translates to: LGHKQGQLRAPG*PIAAKVKAINP
Trigger: TGGATTAATGGCTTTAACCTTGGCCGCTATTGGCCAGCCCGGGGCCCTCAGTTGACCTTGTTTGTGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS CCA 72 bp AAGGAATCGAGACTCGTCTCAACACCTCGTTACAGATaGGGAAGTGGATCCAAGCGCAAAGGGCGGCCGGAG +
Preference number: 6 (lower is better)
Translates to: KESRLVSTPRYR*GSGSKRKGRPE
Trigger: CTCCGGCCGCCCTTTGCGCTTGGATCCACTTCCCCATCTGTAACGAGGTGTTGAGACGAGTCTCGATTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450835.1
CDS GCA 72 bp CCTTCCAGTAGAAGCGGGGCACACGGGAGTAGTGAATaGTTCCTGAGATGTAGCGAAATGGCTGGCCATCCT +
Preference number: 6 (lower is better)
Translates to: PSSRSGAHGSSE*FLRCSEMAGHP
Trigger: AGGATGGCCAGCCATTTCGCTACATCTCAGGAAGCATTCACTACTCCCGTGTGCCCCGCTTCTACTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000436768.1
ENST00000446732.5
ENST00000450835.1
ENST00000464355.1
CDS CCA 72 bp CCCCAGGTGGCTGCACACTGCATCCTCAGTGTCCAGTaGAAAGATCGTCCAGTCCGTGAGGATATTGGAACT +
Preference number: 6 (lower is better)
Translates to: PQVAAHCILSVQ*KDRPVREDIGT
Trigger: AGTTCCAATATCCTCACGGACTGGACGATCTTTCCACTGGACACTGAGGATGCAGTGTGCAGCCACCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000497796.5
CDS CCA 72 bp GCCTTGGTCAAGGGTCCTTTGGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTGATGTTGCTGCGCGCA +
Preference number: 6 (lower is better)
Translates to: ALVKGPLGSHFL*LRKASVMLLRA
Trigger: TGCGCGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGACCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498537.5
CDS TCA 72 bp GTAGAAGCGGGGCACACGGGAGTAGTGAATGCTTCCTaGGATGTAGCGAAATGGCTGGCCATCCTTGAGGAA +
Preference number: 6 (lower is better)
Translates to: VEAGHTGVVNAS*DVAKWLAILEE
Trigger: TTCCTCAAGGATGGCCAGCCATTTCGCTACATCTCAGGAAGCATTCACTACTCCCGTGTGCCCCGCTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000436768.1
ENST00000446732.5
ENST00000450835.1
ENST00000464355.1
CDS TCA 72 bp TCCTCAGAAAACTGGTACTGTCCTGGCCAGGGCTCATaGAAGTTCCAGGGCACATACGTCTGGATGGCGTTC +
Preference number: 6 (lower is better)
Translates to: SSENWYCPGQGS*KFQGTYVWMAF
Trigger: GAACGCCATCCAGACGTATGTGCCCTGGAACTTTCATGAGCCCTGGCCAGGACAGTACCAGTTTTCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307363.10
ENST00000399402.7
ENST00000450835.1
ENST00000464355.1
CDS CCA 72 bp AGAAGTTCCCCATATAAAAGGCCGGGAGCGTGTAGTTaGATGAGTTGTGGGCCCAGGCTTCATCATGGTGGC +
Preference number: 6 (lower is better)
Translates to: RSSPYKRPGACS*MSCGPRLHHGG
Trigger: GCCACCATGATGAAGCCTGGGCCCACAACTCATCCAACTACACGCTCCCGGCCTTTTATATGGGGAACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
CDS CAA 72 bp CCATCCACAGCAACATATGCTCGATCGTGGACTCCATaGAGGGGTGAAGAGAGAGGTGCTGGGTTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: PSTATYARSWTP*RGEERGAGLLQ
Trigger: TTGCAGCAACCCAGCACCTCTCTCTTCACCCCTCAATGGAGTCCACGATCGAGCATATGTTGCTGTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS TCA 72 bp CCAGAGTGGCTCCAGCTTTCCCTGTTATGTTCAGAGTaGTCACATTGTTTCGCTCAAGGACTCCCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: PEWLQLSLLCSE*SHCFAQGLPGG
Trigger: TCCCCCAGGGAGTCCTTGAGCGAAACAATGTGATCACTCTGAACATAACAGGGAAAGCTGGAGCCACTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS GCA 72 bp AGCAGGCCTCAAACACTTCATGTTTTTCTTGGGCATTaGCCTGCCAAGCCTTGGTCAAGGGTCCTTTGGGCT +
Preference number: 6 (lower is better)
Translates to: SRPQTLHVFLGH*PAKPWSRVLWA
Trigger: AGCCCAAAGGACCCTTGACCAAGGCTTGGCAGGGCAATGCCCAAGAAAAACATGAAGTGTTTGAGGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498537.5
CDS CAA 72 bp GCTCCAGCTTTCCCTGTTATGTTCAGAGTGATCACATaGTTTCGCTCAAGGACTCCCTGGGGGATCCCATCC +
Preference number: 6 (lower is better)
Translates to: APAFPVMFRVIT*FRSRTPWGIPS
Trigger: GGATGGGATCCCCCAGGGAGTCCTTGAGCGAAACAATGTGATCACTCTGAACATAACAGGGAAAGCTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS CAA 90 bp TCCAGAGTGGCTCCAGCTTTCCCTGTTATGTTCAGAGTGATCACATaGTTTCGCTCAAGGACTCCCTGGGGGATCCCATCCACAGCAACA +
Preference number: 6 (lower is better)
Translates to: SRVAPAFPVMFRVIT*FRSRTPWGIPSTAT
Trigger: TGTTGCTGTGGATGGGATCCCCCAGGGAGTCCTTGAGCGAAACAATGTGATCACTCTGAACATAACAGGGAAAGCTGGAGCCACTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS CAA 90 bp GTCCCAGTATTCTGCAAAGCAGGCCTCAAACACTTCATGTTTTTCTaGGGCATTGCCCTGCCAAGCCTTGGTCAAGGGTCCTTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: VPVFCKAGLKHFMFF*GIALPSLGQGSFGL
Trigger: GAGCCCAAAGGACCCTTGACCAAGGCTTGGCAGGGCAATGCCCAAGAAAAACATGAAGTGTTTGAGGCCTGCTTTGCAGAATACTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498537.5
CDS TCA 72 bp TTCAACAGGTTTGGAGGGATGATCGTAGGTCACAGATaGGCCAATAACTGGCCTGTCCACGAACGTCACAGC +
Preference number: 6 (lower is better)
Translates to: FNRFGGMIVGHR*ANNWPVHERHS
Trigger: GCTGTGACGTTCGTGGACAGGCCAGTTATTGGCTCATCTGTGACCTACGATCATCCCTCCAAACCTGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
CDS CCA 72 bp GAATTGATCAAGGGTCCTTTGGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTGATGTTGCTGCGCGCA +
Preference number: 6 (lower is better)
Translates to: ELIKGPLGSHFL*LRKASVMLLRA
Trigger: TGCGCGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482097.5
ENST00000485698.5
CDS CCA 72 bp TCTGCAAAGCAGGCCTCAAACACTTCATGTTTTTCTTaGGCATTGCCCTGCCAAGCCTTGGTCAAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: SAKQASNTSCFS*ALPCQALVKGP
Trigger: AGGACCCTTGACCAAGGCTTGGCAGGGCAATGCCCAAGAAAAACATGAAGTGTTTGAGGCCTGCTTTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498537.5
CDS CAA 72 bp TTCTGCAAAGCAGGCCTCAAACACTTCATGTTTTTCTaGGGCATTGCCCTGCCAAGCCTTGGTCAAGGGTCC +
Preference number: 6 (lower is better)
Translates to: FCKAGLKHFMFF*GIALPSLGQGS
Trigger: GGACCCTTGACCAAGGCTTGGCAGGGCAATGCCCAAGAAAAACATGAAGTGTTTGAGGCCTGCTTTGCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498537.5
CDS CCA 72 bp GAATTGATCAAGGGTCCTTTGGGCTCACACTTCCTCTaGCTTAGGAAAGCATCTGTGATGTTGCTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: ELIKGPLGSHFL*LRKASVMLLPA
Trigger: TGCAGGCAGCAACATCACAGATGCTTTCCTAAGCCAGAGGAAGTGTGAGCCCAAAGGACCCTTGATCAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307377.12
CDS TCA 72 bp TGCTTCCTGAGATGTAGCGAAATGGCTGGCCATCCTTaGGGAAGGAGTCCCGGCTATAGTCAATTTCAAACA +
Preference number: 6 (lower is better)
Translates to: CFLRCSEMAGHP*GRSPGYSQFQT
Trigger: TGTTTGAAATTGACTATAGCCGGGACTCCTTCCTCAAGGATGGCCAGCCATTTCGCTACATCTCAGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000436768.1
ENST00000446732.5
ENST00000450835.1
ENST00000464355.1
CDS TCA 72 bp CTGGGATCTGATGCATTTGCTTACCATTTTGGCCCCTaGATTCAGAATGGGCACTGCAAGGCAGTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: LGSDAFAYHFGP*IQNGHCKAVQK
Trigger: TTTCTGCACTGCCTTGCAGTGCCCATTCTGAATTCAGGGGCCAAAATGGTAAGCAAATGCATCAGATCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473477.1
CDS CAA 72 bp AGAGAGGTGCTGGGTTGCTGCAATCTTGAGGAAGTGTaGTCCGGTACAGCACAAACCCATAATGCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: REVLGCCNLEEV*SGTAQTHNAVS
Trigger: TGAAACAGCATTATGGGTTTGTGCTGTACCGGACAACACTTCCTCAAGATTGCAGCAACCCAGCACCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000467571.5
ENST00000497796.5
CDS CAA 90 bp GCATCCTCAGTGTCCAGTGGAAAGATCGTCCAGTCCGTGAGGATATaGGAACTGAGAGTCAGGTTAGAAACCAAACCCTTAAAATCGTTG +
Preference number: 6 (lower is better)
Translates to: ASSVSSGKIVQSVRI*ELRVRLETKPLKSL
Trigger: CAACGATTTTAAGGGTTTGGTTTCTAACCTGACTCTCAGTTCCAATATCCTCACGGACTGGACGATCTTTCCACTGGACACTGAGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000497796.5
CDS CAA 90 bp GAGAGCCTGGAAATTCATGGTTCATTTACCTGGGATCTGATGCATTaGCTTACCATTTTGGCCCCTGAATTCAGAATGGGCACTGCAAGG +
Preference number: 6 (lower is better)
Translates to: ESLEIHGSFTWDLMH*LTILAPEFRMGTAR
Trigger: CCTTGCAGTGCCCATTCTGAATTCAGGGGCCAAAATGGTAAGCAAATGCATCAGATCCCAGGTAAATGAACCATGAATTTCCAGGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473477.1
CDS CAA 72 bp GTGTCCAGTGGAAAGATCGTCCAGTCCGTGAGGATATaGGAACTGAGAGTCAGGTTAGAAACCAAACCCTTA +
Preference number: 6 (lower is better)
Translates to: VSSGKIVQSVRI*ELRVRLETKPL
Trigger: TAAGGGTTTGGTTTCTAACCTGACTCTCAGTTCCAATATCCTCACGGACTGGACGATCTTTCCACTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307363.10
ENST00000307377.12
ENST00000399402.7
ENST00000461475.5
ENST00000497796.5
CDS CAA 72 bp TCATTTACCTGGGATCTGATGCATTTGCTTACCATTTaGGCCCCTGAATTCAGAATGGGCACTGCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: SFTWDLMHLLTI*APEFRMGTARQ
Trigger: CTGCCTTGCAGTGCCCATTCTGAATTCAGGGGCCAAAATGGTAAGCAAATGCATCAGATCCCAGGTAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473477.1
CDS CAA 90 bp ATTCATGGTTCATTTACCTGGGATCTGATGCATTTGCTTACCATTTaGGCCCCTGAATTCAGAATGGGCACTGCAAGGCAGTGCAGAAAG +
Preference number: 6 (lower is better)
Translates to: IHGSFTWDLMHLLTI*APEFRMGTARQCRK
Trigger: CTTTCTGCACTGCCTTGCAGTGCCCATTCTGAATTCAGGGGCCAAAATGGTAAGCAAATGCATCAGATCCCAGGTAAATGAACCATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473477.1
CDS GCA 72 bp ATGATGCCTTGGGAAATATATGGTCTCCCAAATTGCTaGACAAGTTCAATGATGTCATGTAGCATGCGGGCA +
Preference number: 6 (lower is better)
Translates to: MMPWEIYGLPNC*TSSMMSCSMRA
Trigger: TGCCCGCATGCTACATGACATCATTGAACTTGTGCAGCAATTTGGGAGACCATATATTTCCCAAGGCATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497796.5
CDS CCA 72 bp TATTACCTCATGATGAATGCCCTGCACTGTTATAACTaGCCCTCCATTCTGATAGAGGAGAGGCTTCATCTT +
Preference number: 6 (lower is better)
Translates to: YYLMMNALHCYN*PSILIEERLHL
Trigger: AAGATGAAGCCTCTCCTCTATCAGAATGGAGGGCCAGTTATAACAGTGCAGGGCATTCATCATGAGGTAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464355.1
CDS CCA 72 bp CCTTCTGGTACTTTTTCAAACTTGCCCACTGAGTACTaGAGTCAACACTCAAGTTTTGTTCTGTCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: PSGTFSNLPTEY*SQHSSFVLSLS
Trigger: GGAGAGAGACAGAACAAAACTTGAGTGTTGACTCCAGTACTCAGTGGGCAAGTTTGAAAAAGTACCAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467571.5
CDS CCA 72 bp GCTAAAGAGAGCCTGGAAATTCATGGTTCATTTACCTaGGATCTGATGCATTTGCTTACCATTTTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: AKESLEIHGSFT*DLMHLLTILAP
Trigger: AGGGGCCAAAATGGTAAGCAAATGCATCAGATCCCAGGTAAATGAACCATGAATTTCCAGGCTCTCTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473477.1
CDS CAA 90 bp GGGAATCCCAGAATCCACTCCAATTATCAAGGTCCTCACTACCACTaGATTAATTTCTACAGTGACCCATTTCCAAAACATCAGCGGAAC +
Preference number: 6 (lower is better)
Translates to: GNPRIHSNYQGPHYH*INFYSDPFPKHQRN
Trigger: GTTCCGCTGATGTTTTGGAAATGGGTCACTGTAGAAATTAATCAAGTGGTAGTGAGGACCTTGATAATTGGAGTGGATTCTGGGATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481581.1
CDS CCA 72 bp AGGACCTTCTGGTACTTTTTCAAATTGGCTGACAAGTaGGTCAAAGAAGACTCTGCAGATAAGGTAACTGAG +
Preference number: 6 (lower is better)
Translates to: RTFWYFFKLADK*VKEDSADKVTE
Trigger: CTCAGTTACCTTATCTGCAGAGTCTTCTTTGACCCACTTGTCAGCCAATTTGAAAAAGTACCAGAAGGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461475.5
CDS CCA 72 bp TGCAAACTTTGGTGTAGATGGAGGGATAGGACCTTCTaGTACTTTTTCAAATTGGCTGACAAGTGGGTCAAA +
Preference number: 6 (lower is better)
Translates to: CKLWCRWRDRTF*YFFKLADKWVK
Trigger: TTTGACCCACTTGTCAGCCAATTTGAAAAAGTACCAGAAGGTCCTATCCCTCCATCTACACCAAAGTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461475.5
CDS CAA 72 bp GAAATTCATGGTTCATTTACCTGGGATCTGATGCATTaGCTTACCATTTTGGCCCCTGAATTCAGAATGGGC +
Preference number: 6 (lower is better)
Translates to: EIHGSFTWDLMH*LTILAPEFRMG
Trigger: GCCCATTCTGAATTCAGGGGCCAAAATGGTAAGCAAATGCATCAGATCCCAGGTAAATGAACCATGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473477.1
CDS CAA 72 bp TTTTCAGATCTCAGGTTGATTTATAACGAGGAAGGCTaGTCCCAGTATTCTGCAAAGCAGGCCTCAAACACT +
Preference number: 6 (lower is better)
Translates to: FSDLRLIYNEEG*SQYSAKQASNT
Trigger: AGTGTTTGAGGCCTGCTTTGCAGAATACTGGGACAAGCCTTCCTCGTTATAAATCAACCTGAGATCTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498537.5
CDS CAA 90 bp GAATCCAGATTTTCAGATCTCAGGTTGATTTATAACGAGGAAGGCTaGTCCCAGTATTCTGCAAAGCAGGCCTCAAACACTTCATGTTTT +
Preference number: 6 (lower is better)
Translates to: ESRFSDLRLIYNEEG*SQYSAKQASNTSCF
Trigger: AAAACATGAAGTGTTTGAGGCCTGCTTTGCAGAATACTGGGACAAGCCTTCCTCGTTATAAATCAACCTGAGATCTGAAAATCTGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498537.5